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Oryza sativa
cluster # 14660 cluster # 14660       Sequences # 17       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14660#0 length = 1205 sequences # 16  
consensus_14660#1 length = 454 sequences # 1  

consensusID : consensus_14660#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 1205
fasta sequence
                              [CTGAAGGAGTAGAAACTCCGCGCTCCTCCTCTCCCTCCCCCTCCGCGCAACATCCGGAAGCTTCTGGAAATCTGGAGGCGACGAACCCAGGAGCGGCGAAGCGCCTCCA-AGCCCTAGGCGGGAAAGATCACTATGGGAAGAGGCTATGATTATGGTCCATCACCGCCAAGAGAATACAGGAGAAGAGCCCGCAGCCCAAGTCCTCGTGGGCGCTATGGAGGCCGTGACAGGGATCTCCCAACTAGTCTTTTGGTGAGGAATCTTCGCCGTGACTGTAGGCCTGATGATCTACGAAGACCATTTGGAAAATTTGGTCGTGTCAAAGATATATATCTTCCAAGAGATTATTACACTGGGGAGCCTCGA-GGATTT-GGGTTCATCCAATATTAT-GATCC-TGAGGA-TGCTGC-TGATGCAAAATACCACATGGATGGGCAAATTC-TTCTTGGCAGGGAAGTTACTGTTGTATTTGCTGAGGAGAACAGAAAGAAACCATCTGAGATGAGGGCTAGGGAAAGAGTCGGTAGCAGGGACCGTTCTTATGATCGCAGGTCGCGCTCTCCTAGATACTCCCGCTCAAGGTCACC-TGTGTACTCTCCAAGATCACGGT-CCCGTAGTCGAAGCTACTCACCTGCACCTAAGAGAAAGCACTATTCA---AGGTCTCCTGCCCGTCGGGAGAGATCTCTGTCGCGCTCACCAGCGGAC-AGCAGATCACGAAGTAG-AAGCCTC-TCTGATGACCGCCGCAGCAAGTCACCTGACAGGGAGAGGTCTCTTTCTGTTAGCCGGTGAGGAGCTTAGGACCCAAATGCCAACGGGGCA-C-TGGGTTGAACCA-TGTTTCGATGATGACTGCTTCTT-GTTA-CTA-GGTTGAACCATGTTTCGGAATTTTT-AGGCCATCCTGATCTTCTAGGAATGTTAATGATGTGTGGTCTTCTAGGAT--TTCCTT-TTCA-TTGTTGGATCCTGA-AGATA-AAAA-GTC-GAAGCATCGAACA-ACTTATCATAAACT-TTGACCTCGTGCCCATTTTAAGTGACTGGTTATTGCCT-T-TTGTGGTCCTGTAACGT-TACCAATGA-TTTCCCCA-TTGGCGAGCAGGCATTGTTAATGTAAGAACTCAAGTCAGGATTACTAGTTGTCAAAATTCTGCTTTTCATACTCATCATCTGGAGGTTATTTTGTTGGTTAATAAGACACCCTTTTTTTTCTCTGAAAAAAAAAA]

[+] EMBL CF279550             [CTGAAGGAGTAGAAACTCCGCGCTCCTCCTCTCCCTCCCCCTCCGCGCAACATCCGGAAGCTTCTGGAAATCTGGAGGCGACGAACCCAGGAGCGGCGAAGCGCCTCCA AGCCCTAGGCGGGAAAGATCACTATGGGAAGAGGCTATGATTATGGTCCATCACCGCCAAGAGAATACAGGAGAAGAGCCCGCAGCCCAAGTCCTCGTGGGCGCTATGGAGGCCGTGACAGGGATCTCCCAACTAGTCTTTTGGTGAGGAATCTTCGCCGTGACTGTAGGCCTGATGATCTACGAAGACCATTTGGAAAATTTGGCCGTGTCAAAGATATATATCTTCCAAGAGATTATTACACTGGGGAGCCTCGA GGATTT GGGTTCATCCAATATTAT GATCC TGAGGA TGCTGC TGATGCAAAATACCACATGGATGGGCAAATTC TTCTTGGAGGGGAAGTTACTGTTGTATTTGCTGAGGAGAACAGAAAGAAACCATCTGAGATGAGGGCTAGGGAAAGAGTCGGTAGCAGGGACCGTTCTTATGATCGCAGGTCGCGCTCTCCTAGATACTCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF280244             [                     GCTCCTCCTCTCCCTCCCCCTCCGCGCAACATCCGGAAGCTTCTGGAAATCTGGAGGCGACGAACCCAGGAGCGGCGAAGCGCCTCCA AGCCCTAGGCGGGAAAGATCACTATGGGAAGAGGCTATGATTATGGTCCATCACCGCCAAGAGAATACGGGAGAAGAG CCGCAGCCCAAGTCCTCGTGGGCGCTATGGAGGCCGTGACAGGGATCTCCCAACTAGTCTTTTGGTGAGGAATCTTCGCCGTGACTGTAGGCCTGATGATCTACGAAGACCATTTGGAAAATTTGGTCGTGTCAAAGATATATATCTTCCAAGAGATTATTACACTGGGGAGCCTCGA GGATTT GGGTTCATCCAATATTAT GATCC TGAGGA TGCTGC TGATGCAAAATACCACATGGATGGGCAAATTC TTCTTGGCGGGGAAGTTACTGTTGTATTTGCTGAGGAGAACAGAAAGAAACCATCTGAGATGAGGGCTAGGGAAAGAGTCGGTAGCAGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF279066             [                       TCCTCCTCTCCCTCCCCCTCCGCGCAACATCCGGAAGCTTCTGGAAATCTGGAGGCGACGAACCCAGGAGCGGCGAAGCGCCTCCA AGCCCTAGGCGGGAAAGATCACTATGGGAAGAGGCTATGATTATGGTCCATCACCGCCAAGAGAATACAGGAGAAGAGCCCGCAGCCCAAGTCCTCGTGGGCGCTATGGAGGCCGTGACAGGGATCTCCCAACTAGTCTTTTGGTGAGGAATCTTCGCCGTGACTGTAGGCCTGATGATCTACGAAGACCATTTGGAAAATTTGGCCGTGTCAAAGATATATATCTTCCAAGAGATTATTACACTGGGGAGCCTCGA GGATTT GGGTTCATCCAATATTAT GATCC TGAGGA TGCTGC TGATGCAAAATACCACATGGATGGGCAAATTC TTCTTGGAGGGGAAGTTACTGTTGTATTTGCTGAGGAGAACAGAAAGAAACCATCTGAGATGAGGGCTAGGGAAAGAGTCGGTAGCAGGGACCGTTCTTATGATCGCAGGTCGCGCTCTCCTAGATACTCCCGCTCAAGGTCACCGTGTGTACTCTCCAAGATCACGGTCCCCGTAGTCGAAGCTACTCACCTGCACCTAAGAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF292297             [                         CTCCTCTCCCTCCCCCTCCGCGCAACATCCGGAAGCTTCTGGAAATCTGGAGGCGACGAACCCAGGAGCGGCGAAGCGCCTCCA AGCCCTAGGCGGGAAAGATCACTATGGGAAGAGGCTATGATTATGGTCCATCACCGCCAAGAGAATACAGGAGAAGAGCCCGCAGCCCAAGTCCTCGTGGGCGCTATGGAGGCCGTGACAGGGATCTCCCAACTAGTCTTTTGGTGAGGAATCTTCGCCGTGACTGTAGGCCTGATGATCTACGAAGACCATTTGGAAAATTTGGTCGTGTCAAAGATATATATCTTCCAAGAGATTATTACACTGGGGAGCCTCGA GGATNT GGGTTCATCCAATATTAT GATCC TGAGGA TGCTGC TGATGCAAAATACCACATGGATGGGCAAATTC TTCTTGGCAGGGAAGTTACTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C27616               [                                                 ACATCCGGAAGCTTCTGGAAATCTGGAGGCGACGAACCCAGGAGCGGCGA  NGCTTCCANAGCCCTAGG GNGAAAGATCACTATGGGAAGAGGCTATGATTATGGTCCATCACCGCCAAGAGAATACAGGAGAAGAGCCCGCAGCCCAAGTCCTCGTGGGCGCTATGGAGGCCGTGACAGGGATCTCCCAACTAGTCTTTTGGTGAGGAATCTTCGCCGTGACTGTAGGCCTGATGATCTACGAAGACCATTTGGAAAATTTGGTCGTGTCAAAGATATATATCTTCCAAGAGATTATTACACTGGGGAGCCTCGANGGATTTGGGGTTCATCCATTATTATNGATCCTTAAGGATTCCTTCTTAATGCAAATTCCCACATGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU085759             [                                                                                                                                                                                                                                                                                                                          GTCGTGTCAAAGATATATATCTTCCAAGAGATTATTACACTGGGGAGCCTCGA GGATTT GGGTTCATCCAATATTAT GATCC TGAGGA TGCTGC TGATGCAAAATACCACATGGATGGGCAAATTC TTCTTGGCAGGGAAGTTACTGTTGTATTTGCTGAGGAGAACAGAAAGAAACCATCTGAGATGAGGGCTAGGGAAAGAGTCGGTAGCAGGGACCGTTCTTATGATCGCAGGTCGCGCTCTCCTAGATACTCCCGCTCAAGGTCACC TGTGTACTCTCCAAGATCACGGT CCCGTAGTCGAAGCTACTCACCTGCACCTAAGAGAAAGCACTATTCAAGCAGGTCTCCTGCCCGTCGGGAGAGATCTCTGTCGCGCTCACCAGCGGAC AGCAGATCACGAAGTAG AAGCCTC TCTGATGACCGCCGCAGCAAGTCACCTGACAGGGAGAGGTCTCTTTCTGTTAGCCGGTGAGGAGCTTAGGACCCAAATGCCAACGGGGCA C TGGGTTGAACCA TGTTTCGATGATGACTGCTTCTT GTTA CTA GGTTGAACCATGTTTCGGAATTTTT AGGCCATCCTGATCTTCTAGGAATGTTAATGATGTGTGGTCTTCTAGGAT  TTCCTT TTCA TTGTTGGATCCTGA AGATA AAAA GTC GAAGCATCGAACA ACTTATCAAAAAaa aaa                                                                                                                                                                                                                  ]
[-] EMBL CF279551             [                                                                                                                                                                                                                                                                                                                                                                                            CATCCAATATTAT GATCC TGAGGA TGCTGC TGATGCAAAATACCACATGGATGGGCAAATTC TTCTTGGCAGGGAAGTTACTGTTGTATTTGCTGAGGAGAACAGAAAGAAACCATCTGAGATGAGGGCTAGGGAAAGAGTCGGTAGCAGGGACCGTTCTTATGATCGCAGGTCGCGCTCTCCTAGATACTCCCGCTCAAGGTCACC TGTGTACTCTCCAAGATCACGGT CCCGTAGTCGAAGCTACTCACCTGCACCTAAGAGAAAGCACTATTCA   AGGTCTCCTGCCCGTCGGGAGAGATCTCTGTCGCGCTCACCAGCGGAC AGCAGATCACGAAGTAG AAGCCTC TCTGATGACCGCCGCAGCAAGTCACCTGACAGGGAGAGGTCTCTTTCTGTTAGCCGGTGAGGAGCTTAGGACCCAAATGCCAACGGGGCA C TGGGTTGAACCA TGTTTCGATGATGACTGCTTCTT GTTA CTA GGTTGAACCATGTTTCGGAATTTTT AGGCCATCCTGATCTTCTAGGAATGTTAATGATGTGTGGTCTTCTAGGAT  TTCCTT TTCA TTGTTGGATCCTGA AGATA AAAA GTC AAAGCATCGAACA ACTTATCAAAAA                                                                                                                                                                                                                        ]
[+] EMBL AU092338             [                                                                                                                                                                                                                                                                                                                                                                                                                                                         AATTCTTTCTTGGCAGGNAAGTTACTGTTGTATTTGCTGAGGAGAACAGAAAGAAACCATCTGAGATGAGGGCTAGGGAAAGAGTCGGTAGCAGGGACCGTTCTTATGATCGCAGGTCGCGCTCTCCTAGATACTCCCGCTCAAGGTCACC TGTGTACTCTCCAAGATCACGGT CCCGTAGTCGAAGCTACTCACCTGCACCTAAGAGAAAGCACTATTCA   AGGTCTCCTGCCCGTCGGGAGAGATCTCTGTCGCGCTCACCAGCGGAC AGCAGATCACGAAGTAG AAGCCTC TCTGATGACCGCCGCAGCAAGTCACCTGACAGGGAGAGGTCTCTTTCTGTTAGCCGGTGAGGAGCTTAGGACCCAAATGCCAACGGGGCA C TGGGTTGAACCA TGTTTCGATGATGACTGCTTCTT GTTA CTA GGTTGAACCATGTTTCGGAATTTTT AGGCCATCCTGATCTTCTAGGAATGTTAATGATGTGTGGTCTTCTAGGAT  TTCCTT TTCA TTGTTGGATCCTGA AGATA AAAA GTC GAAGCATCGAACA ACTTATCATATTCT TTGACCTCGTGCCCATTTTAAGTGACTGGTTATTGCCT T TTGTGGTCCTGTAACGT TACCAATGA TTTCCCCA TTGGCGAGCAGGCATTGTTAATGTAAGAACTCAAGTCAGGATTACTAGTTGTCAAAAa                                                                             ]
[+] EMBL AU063689             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CATCTGAGATGAGGGCTAGGGAAAGAGTCGGTAGCAGGGACCGTTCTTATGATCGCAGGTCGCGCTCTCCTAGATACTCCCGCTCAAGGTCACC TGTGTACTCTCCAAGATCACGGT CCCGTAGTCGAAGCTACTCACCTGCACCTAAGAGAAAGCACTATTCA   AGGTCTCCTGCCCGTC GGAGAGATCTCTGTCGCGCTCACCAGCGGAC AGCAGATCACGAAGTAGTAAGCCTC TCTGATGACCGCCGCAGCAAGTCACCTGACAGGGAGAGGTCTCTTTCTGTTAGCCGGTGAGGAGCTTAGGACCCAAATGCCAACGGGGCA CTTGGTTTGAACCA TGTTTCGATGATGACTGCTTNTTNGTAA CTAGGGTTGAACCATTTTTCGGGATTTTTNAGGCC                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CF292296             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGGTCACC TGTGTACTCTCCAAGATCACGGT CCCGTAGTCGAAGCTACTCACCTGCACCTAAGAGAAAGCACTATTCA   AGGTCTCCTGCCCGTCGGGAGAGATCTCTGTCGCGCTCACCAGCGGAC AGCAGATCACGAAGTAG AAGCCTC TCTGATGACCGCCGCAGCAAGTCACCTGACAGGGAGAGGTCTCTTTCTGTTAGCCGGTGAGGAGCTTAGGACCCAAATGCCAACGGGGCA C TGGGTTGAACCA TGTTTCGATGATGACTGCTTCTT GTTA CTA GGTTGAACCATGTTTCGGAATTTTT AGGCCATCCTGATCTTCTAGGAATGTTAATGATGTGTGGTCTTCTAGGAT  TTCCTT TTCA TTGTTGGATCCTGA AGATA AAAA GTC GAAGCATCGAACA ACTTATCATATTCT TTGACCTCGTGCCCATTTTAAGTGACTGGTTATTGCCT T TTGTGGTCCTGTAACGT TACCAATGA TTTCCCCA TTGGCGAGCAGGCATTGTTAATGTAAGAACTCAAGTCAGGATTACTAGTTAAAAAAA                                                                              ]
[-] EMBL CF279067             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCCGTAGTCGAAGCTACTCACCTGCACCTAAGAGAAAGCACTATTCA   AGGTCTCCTGCCCGTCGGGAGAGATCTCTGTCGCGCTCACCAGCGGAC AGCAGATCACGAAGTAG AAGCCTC TCTGATGACCGCCGCAGCAAGTCACCTGACAGGGAGAGGTCTCTTTATGTTAGCCGGTGAGGAACTTAGGNCCCAAATGCCAACGGGGCA A TAGGTTGAACCA TGTTTCAAAAAAAACTGCTTCTT GTTA CTA GGTTGAACCATGTTTCGGAATTTTT AGGCCATCCTGATCTTCTAGGAATGTTAATGATGTGTGGTCTTCTAGGAT  TTCCTT TTCA TTGTTGGATCCTGA AGATA AAAA GTC GAAACATCGAACA ACTTATCAAAAA                                                                                                                                                                                                                        ]
[+] EMBL CF330884             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTAAGAGAAAGCACTATTCA   AGGTCTCCTGCCCGTCGGGAGAGATCTCTGTCGCGCTCACCAGCGGAC AGCAGATCACGAAGTAG AAGCCTC TCTGATGACCGCCGCAGCAAGTCACCTGACAGGGAGAGGTCTCTTTCTGTTAGCCGGTGAGGAGCTTAGGACCCAAATGCCAACGGGGCA C TGGGTTGAACCA TGTTTCGATGATGACTGCTTCTT GTTA CTA GGTTGAACCATGTTTCGGAATTTGT AGGCCATCCTGATCTTCTAGGA                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CF330885             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TAAGAGAAAGCACTATTCA   AGGTCTCCTGCCCGTCGGGAGAGATCTCTGTCGCGCTCACCAGCGGAC AGCAGATCACGAAGTAG AAGCCTC TCTGATGACCGCCGCAGCAAGTCACCTGACAGGGAGAGGTCTCTTTCTGTTAGCCGGTGAGGAGCTTAGGACCCAAATGCCAACGGGGCA C TGGGTTGAACCA TGTTTCGATGATGACTGCTTCTT GTTA CTA GGTTGAACCATGTTTCGGAATTTGT AGGCCATCCTGATCTTCTAGGAATGTTAATGATGTGTGGTCTTCTAGGAT  TTCCTT TTCA TTGTTGGATCCTGA AGATA AAAA GTC GAAGCATCGAACA ACTTATCATAAAaaa                                                                                                                                                                                                                     ]
[-] EMBL CF280245             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CA   AGGTCTCCTGCCCGTCGGGAGAGATCTCTGTCGCGCTCACCAGCGGAC AGCAGATCACGAAGTAG AAGCCTC TCTGATGACCGCCGCAGCAAGTCACCTGACAGGGAGAGGTCTCTTTCTGTTAGCCGGTGAGGAGCTTAGGACCCAAATGCCAACGGGGCA C TGGGTTGAACCA TGTTTCGATGATGACTGCTTCTT GTTA CTA GGTTGAACCATGTTTCGGAATTTTT AGGCCATCCTGATCTTCTAGGAATGTTAATGATGTGTGGTCTTCTAGGAT  TTCCTT TTCA TTGTTGGATCCTGA AGATA AAAA                                                                                                                                                                                                                                                       ]
[+] EMBL BI798212             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCTGCCCCTCGGGAGAGATCTCTGTCGCGCTCACCAGCGGACAACCAGATCACGAAGTAG AA CCTC TCTGATGA CTCCGCAGCAAGTCACCTGACAGGGAGAGGTCTCTTTCTGTTAGCCGGTGAGGAGCTTAGGACCCCAATGCCAACGGGGCA C TGGGTTGAACCA TGTTTCGATGATGACTGCTTCTT GTTA CTA GGTTGAACCATGTTTCGGAATTTTT AGGCCATCCTGATCTTCTAGGAATGTTAATGATGTGTGGTCTTCTAGGAT  TTCCTT TTCA TTGTTGGATCCTGA AGATA AAAA GTC GAAGCATCGAACA A TTATCATATTCT TTGACCTCGTGCCCATTTTAAGTGACTGGTTATT CCT T TTGTGGTCCTGTAACGT TACCCATGA TTTCCCCACTTGGCGA CA GCATTGTTAATGTAAGAACTCAAGTCAGGATTACTAGTTGTCTCAATTCTGCTTTTCATACTCATCATCTGGAGGTTATTTTGTTGGTTAATAAGACACCCTTTTTTTTCTCTGAAAAAAAAAA]
[+] EMBL BI795337             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   actGAAGTAG AAGCCTCGTCTGATGA CTCCGCAGCAAGTCACCTGACAGGGAGAGGTCTCTTTCTGTTATCCGGTGAGGAGCTTAGGACCC  ATGCCAACGGGGCAGC TGGGTTGAACCAGTGTTTCGATGATGACTGCTTCTT GTTAGCTA GGTTGAACCATGTTTCGGAATTTTT AGGCCATCCTGATCTTCTAGGAATGTTAATGATGTGTGGTCTTCTAGGATGGTTCCTTGTTCAGTTGTTGGATCCTGAGAGATATAAAATGTCTGAAGCATCGAACAGAATTATCATATTCTGTTGACCTCGGGCCCATTTTAAGTGACTGGTTATTGCCTCTCTTGTGGTCCTGTAACGTGTACCCATGAGTTTCCCCA TTGGCGAGCAGGCATTGTTAATGTAAGAACTCAAGTCAGGATTACTAGTTGTCTCAATTCTGCTTTTCATACTCATCATCTGGAGGTTATTTTGTTGGTTAATAAGA ACAGTTTTTTTTCTCTG          ]


>consensus_14660#0 CTGAAGGAGTAGAAACTCCGCGCTCCTCCTCTCCCTCCCCCTCCGCGCAACATCCGGAAG CTTCTGGAAATCTGGAGGCGACGAACCCAGGAGCGGCGAAGCGCCTCCAAGCCCTAGGCG GGAAAGATCACTATGGGAAGAGGCTATGATTATGGTCCATCACCGCCAAGAGAATACAGG AGAAGAGCCCGCAGCCCAAGTCCTCGTGGGCGCTATGGAGGCCGTGACAGGGATCTCCCA ACTAGTCTTTTGGTGAGGAATCTTCGCCGTGACTGTAGGCCTGATGATCTACGAAGACCA TTTGGAAAATTTGGTCGTGTCAAAGATATATATCTTCCAAGAGATTATTACACTGGGGAG CCTCGAGGATTTGGGTTCATCCAATATTATGATCCTGAGGATGCTGCTGATGCAAAATAC CACATGGATGGGCAAATTCTTCTTGGCAGGGAAGTTACTGTTGTATTTGCTGAGGAGAAC AGAAAGAAACCATCTGAGATGAGGGCTAGGGAAAGAGTCGGTAGCAGGGACCGTTCTTAT GATCGCAGGTCGCGCTCTCCTAGATACTCCCGCTCAAGGTCACCTGTGTACTCTCCAAGA TCACGGTCCCGTAGTCGAAGCTACTCACCTGCACCTAAGAGAAAGCACTATTCAAGGTCT CCTGCCCGTCGGGAGAGATCTCTGTCGCGCTCACCAGCGGACAGCAGATCACGAAGTAGA AGCCTCTCTGATGACCGCCGCAGCAAGTCACCTGACAGGGAGAGGTCTCTTTCTGTTAGC CGGTGAGGAGCTTAGGACCCAAATGCCAACGGGGCACTGGGTTGAACCATGTTTCGATGA TGACTGCTTCTTGTTACTAGGTTGAACCATGTTTCGGAATTTTTAGGCCATCCTGATCTT CTAGGAATGTTAATGATGTGTGGTCTTCTAGGATTTCCTTTTCATTGTTGGATCCTGAAG ATAAAAAGTCGAAGCATCGAACAACTTATCATAAACTTTGACCTCGTGCCCATTTTAAGT GACTGGTTATTGCCTTTTGTGGTCCTGTAACGTTACCAATGATTTCCCCATTGGCGAGCA GGCATTGTTAATGTAAGAACTCAAGTCAGGATTACTAGTTGTCAAAATTCTGCTTTTCAT ACTCATCATCTGGAGGTTATTTTGTTGGTTAATAAGACACCCTTTTTTTTCTCTGAAAAA AAAAA



consensusID : consensus_14660#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 454
fasta sequence
                              [GCAGATCAGGAAGTAGAAGCCTCTTTGATGACCGCCGCAGCAAGTCACCTGACGGGGAGAGGTCTCTTTCTGTTAGCCGGTGAGGAGCTTAGGACCCAAATGCCAACGGGGCATTGGGTTGAACCATGTTTAGATGATGACTGCTTATTGTTACTAGGTTGAACCATGTTTCGGAATTTTTAGGCCATCCTGATCTTTTAGGAATGTTAATGATGTGGGGTTTTTTAGGATTTCCTTTTCATTGTTGGATCCTGAAGATAAAAAGTCGAAGCATGGAACAACTTATCATATTCTTTGACCTCGTGCCCATTTTAAGTGAGTGGTTATTGCCTTTTGTGGTCCTGTAACGTTACCAAAGATTTCCCCATTGGCGAGCAGGCATTGTTAATGTAAGAACTCAAGTCAGGATTAAAAAAAAAAAAAAAAAAAAAATTTTATAACCCTGTCATGCAGT]

[-] EMBL CF282248             [GCAGATCAGGAAGTAGAAGCCTCTTTGATGACCGCCGCAGCAAGTCACCTGACGGGGAGAGGTCTCTTTCTGTTAGCCGGTGAGGAGCTTAGGACCCAAATGCCAACGGGGCATTGGGTTGAACCATGTTTAGATGATGACTGCTTATTGTTACTAGGTTGAACCATGTTTCGGAATTTTTAGGCCATCCTGATCTTTTAGGAATGTTAATGATGTGGGGTTTTTTAGGATTTCCTTTTCATTGTTGGATCCTGAAGATAAAAAGTCGAAGCATGGAACAACTTATCATATTCTTTGACCTCGTGCCCATTTTAAGTGAGTGGTTATTGCCTTTTGTGGTCCTGTAACGTTACCAAAGATTTCCCCATTGGCGAGCAGGCATTGTTAATGTAAGAACTCAAGTCAGGATTAAAAAAAAAAAAAAAAAAAAAATTTTATAACCCTGTCATGCAGT]


>consensus_14660#1 GCAGATCAGGAAGTAGAAGCCTCTTTGATGACCGCCGCAGCAAGTCACCTGACGGGGAGA GGTCTCTTTCTGTTAGCCGGTGAGGAGCTTAGGACCCAAATGCCAACGGGGCATTGGGTT GAACCATGTTTAGATGATGACTGCTTATTGTTACTAGGTTGAACCATGTTTCGGAATTTT TAGGCCATCCTGATCTTTTAGGAATGTTAATGATGTGGGGTTTTTTAGGATTTCCTTTTC ATTGTTGGATCCTGAAGATAAAAAGTCGAAGCATGGAACAACTTATCATATTCTTTGACC TCGTGCCCATTTTAAGTGAGTGGTTATTGCCTTTTGTGGTCCTGTAACGTTACCAAAGAT TTCCCCATTGGCGAGCAGGCATTGTTAATGTAAGAACTCAAGTCAGGATTAAAAAAAAAA AAAAAAAAAAAATTTTATAACCCTGTCATGCAGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14660#0      CTGAAGGAGTAGAAACTCCGCGCTCCTCCTCTCCCTCCCCCTCCGCGCAACATCCGGAAG 60
consensus_14660#1      ------------------------------------------------------------
                                                                                   

consensus_14660#0      CTTCTGGAAATCTGGAGGCGACGAACCCAGGAGCGGCGAAGCGCCTCCAAGCCCTAGGCG 120
consensus_14660#1      ------------------------------------------------------------
                                                                                   

consensus_14660#0      GGAAAGATCACTATGGGAAGAGGCTATGATTATGGTCCATCACCGCCAAGAGAATACAGG 180
consensus_14660#1      ------------------------------------------------------------
                                                                                   

consensus_14660#0      AGAAGAGCCCGCAGCCCAAGTCCTCGTGGGCGCTATGGAGGCCGTGACAGGGATCTCCCA 240
consensus_14660#1      ------------------------------------------------------------
                                                                                   

consensus_14660#0      ACTAGTCTTTTGGTGAGGAATCTTCGCCGTGACTGTAGGCCTGATGATCTACGAAGACCA 300
consensus_14660#1      ------------------------------------------------------------
                                                                                   

consensus_14660#0      TTTGGAAAATTTGGTCGTGTCAAAGATATATATCTTCCAAGAGATTATTACACTGGGGAG 360
consensus_14660#1      ------------------------------------------------------------
                                                                                   

consensus_14660#0      CCTCGAGGATTTGGGTTCATCCAATATTATGATCCTGAGGATGCTGCTGATGCAAAATAC 420
consensus_14660#1      ------------------------------------------------------------
                                                                                   

consensus_14660#0      CACATGGATGGGCAAATTCTTCTTGGCAGGGAAGTTACTGTTGTATTTGCTGAGGAGAAC 480
consensus_14660#1      ------------------------------------------------------------
                                                                                   

consensus_14660#0      AGAAAGAAACCATCTGAGATGAGGGCTAGGGAAAGAGTCGGTAGCAGGGACCGTTCTTAT 540
consensus_14660#1      ------------------------------------------------------------
                                                                                   

consensus_14660#0      GATCGCAGGTCGCGCTCTCCTAGATACTCCCGCTCAAGGTCACCTGTGTACTCTCCAAGA 600
consensus_14660#1      ------------------------------------------------------------
                                                                                   

consensus_14660#0      TCACGGTCCCGTAGTCGAAGCTACTCACCTGCACCTAAGAGAAAGCACTATTCAAGGTCT 660
consensus_14660#1      ------------------------------------------------------------
                                                                                   

consensus_14660#0      CCTGCCCGTCGGGAGAGATCTCTGTCGCGCTCACCAGCGGACAGCAGATCACGAAGTAGA 720
consensus_14660#1      -------------------------------------------GCAGATCAGGAAGTAGA 17
                                                                  ******** ********

consensus_14660#0      AGCCTCTCTGATGACCGCCGCAGCAAGTCACCTGACAGGGAGAGGTCTCTTTCTGTTAGC 780
consensus_14660#1      AGCCTCTTTGATGACCGCCGCAGCAAGTCACCTGACGGGGAGAGGTCTCTTTCTGTTAGC 77
                       ******* **************************** ***********************

consensus_14660#0      CGGTGAGGAGCTTAGGACCCAAATGCCAACGGGGCACTGGGTTGAACCATGTTTCGATGA 840
consensus_14660#1      CGGTGAGGAGCTTAGGACCCAAATGCCAACGGGGCATTGGGTTGAACCATGTTTAGATGA 137
                       ************************************ ***************** *****

consensus_14660#0      TGACTGCTTCTTGTTACTAGGTTGAACCATGTTTCGGAATTTTTAGGCCATCCTGATCTT 900
consensus_14660#1      TGACTGCTTATTGTTACTAGGTTGAACCATGTTTCGGAATTTTTAGGCCATCCTGATCTT 197
                       ********* **************************************************

consensus_14660#0      CTAGGAATGTTAATGATGTGTGGTCTTCTAGGATTTCCTTTTCATTGTTGGATCCTGAAG 960
consensus_14660#1      TTAGGAATGTTAATGATGTGGGGTTTTTTAGGATTTCCTTTTCATTGTTGGATCCTGAAG 257
                        ******************* *** ** ********************************

consensus_14660#0      ATAAAAAGTCGAAGCATCGAACAACTTATCATAAACTTTGACCTCGTGCCCATTTTAAGT 1020
consensus_14660#1      ATAAAAAGTCGAAGCATGGAACAACTTATCATATTCTTTGACCTCGTGCCCATTTTAAGT 317
                       ***************** ***************  *************************

consensus_14660#0      GACTGGTTATTGCCTTTTGTGGTCCTGTAACGTTACCAATGATTTCCCCATTGGCGAGCA 1080
consensus_14660#1      GAGTGGTTATTGCCTTTTGTGGTCCTGTAACGTTACCAAAGATTTCCCCATTGGCGAGCA 377
                       ** ************************************ ********************

consensus_14660#0      GGCATTGTTAATGTAAGAACTCAAGTCAGGATTACTAGTTGTCAAAATTCTGCT-TTTCA 1139
consensus_14660#1      GGCATTGTTAATGTAAGAACTCAAGTCAGGATTAAAAAAAAAAAAAAAAAAAAAATTTTA 437
                       **********************************  *      ****        *** *

consensus_14660#0      TACTCATCATCTGGAGGTTATTTTGTTGGTTAATAAGACACCCTTTTTTTTCTCTGAAAA 1199
consensus_14660#1      TAACCCTGTCATGCAGT------------------------------------------- 454
                       **  * *    ** **                                            

consensus_14660#0      AAAAAA 1205
consensus_14660#1      ------
                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)