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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14661#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2022 fasta sequence
[AAGTAAAGCTCCCAAAATCAAATTAAATTAAAGAGAAAAAAAAGAAGAAGAGAAGGGCAAATCGATTCGCCATGGCTGCTCCCCGCACGCCTCTCCCCCTCGTCCTCCTCCTCGTCTCCGCCGCGCTCCTCGCGGCGGCTCCCCTCTCGCCGGCGGCCGAGACCGGTGCCGCCGCGTTCGACGTCCGCCGCCACCTCTCCACCGTCACCAGGTACGATGTGGCGAGGGGATCCAATAGTGTGTCCTCCGCGCCGTCTATGTCGGATGAGTGCCGCGTGATCCACCTCAATCTCGTGGCAAGACATGGGACTCGCGCACCTACCAAAAAGAGAATCAAAGAGCTGGATAGACTGGCGGTTCGGTTGAAGGCTCTTATCGATGAAGCAAAACAAGGGCCTGAAAGTGACTCCCTGAAAAAAATTCCTTCATGGATGAAA-GGGTGGGAGTCACCCTGGAAAGGTAGGGTGAAAGGTGGTGAGCTGGTCAGTGAAGGGGAGGAAGAGCTATACAACCTTGCTATCAGAGTCAAGGAGAGGTTTCAAGGCCTATTTGATGAGGAATATCACCCTGATGTGTATTCAATAAGAGCAACTCAGGTTCCTCGGGCATCAGCTAGTGCAGTAGCATTTGGTTTGGGTCTACTTTCTGGGAAAGGGAAGCTTGGACCTGTGAAAAACCGTGCCTTTTCTGTTCTGAGTGAGAGTCGTGCAAGTGATATTTGTCTGCGATTCTTTGATAGCTGTGAAACATACAAGGACTACAGGAAAAGAAAGGAGCCTGATGTTGAAAAGCAAAAGGAACCAATTTTAGAACACGTCACATCGGCATTAGTTAACCGTTATCATCTCAATTTTACACCAAAAGATGTTTCTTCCCTCTGGTTCCTTTGCAAGCAGGAAGCATCTTTAATGAATATAACCAATCAAGCTTGTCAACTTTTTAATGAAGCTGAGGTTTATTTTCTAGAGTGGACAGATGATCTGGAGGGCTTTGTGCTAAAAGGTTATGGTGAGTCAATAAACTATCGGATGGGACTGCCATTGCTCAAGGACGTTGTCCAGTCAATGGAAGAAGCAATCGTTGCTAAAGAAGAAAACCACCCTGATGGTACATATGAGAAGGCAAGGCTCCGATTTGCACATGCTGAAACTGTTGTCCCTTTCTCATGTCTTCTTGGTCTTTTTCTTGAAGGATCAGATTTTGCGAAGATACAA-CGGGAGGAATCATTGGACATACCTCCTGTGCCACCACAGGGAAGAAATTGGAAGGGCAGTGTTGTTGCACCTTTTGCTGGTAACAATATGTTGGCTTTGTACCAGTGCCCAGGAAAAACTGATGGTGGTAAGATTTCTCGGGATCAGAAGAGCTCATACTTCGTGCAGGTTATACACAATGAAGCTCCAGTTTCAATGCCGGGATGCGGGAACAAAGATTTCTGCCCATTTGAAGAGTTCAAGGAGAAGATAGTTGAACCCCACCTGAAGCATGACTACGACGCCCTATGCAAGATAAGGCCGGTGGCAAGAGAGGAGCCTTCCTCCTTCAGTTCCAGGATGTCCAATTTCTTCCTAGGTTTGTTCTCGCAGAAAGGATACCGTGTTAGTGCTCAGGATGTGAAGTCGGAGCTGTAGGTTTATACTAGGCAGATGGTGCATCTTCTACCTTTCGCACTAAGCTGCTACTATCCATCTACCATGGATAACCAAGGGACTGACTCGTGGACTAAACTACGGTGTTTCTGTACTTGCAACCCTCAGTTTGATGAGCGAGTCCAATGTGTAACAACACGCTATCACTGGTGCCCCTCTTCTTTCAG-ATAGAAGACGTTTGTTGATC-AATGTAATCTTTGTTTTAATCTGGACTTTCTCTAGTGCTCAACTGCTGACTCTGTTGAGATCAAACTGAAAGTACTAGCACACGGTTGTGATTGTGGCCCTTGTGGTAGGTTGAGATCATGTACTACTACTTGGACAATCCGTTTCAAGCTTTCAGCTCAATCAATCCAGATTTGGGAGATCCCCA]
[+] EMBL AK121701 [AAGTAAAGCTCCCAAAATCAAATTAAATTAAAGAGAAAAAAAAGAAGAAGAGAAGGGCAAATCGATTCGCCATGGCTGCTCCCCGCACGCCTCTCCCCCTCGTCCTCCTCCTCGTCTCCGCCGCGCTCCTCGCGGCGGCTCCCCTCTCGCCGGCGGCCGAGACCGGTGCCGCCGCGTTCGACGTCCGCCGCCACCTCTCCACCGTCACCAGGTACGATGTGGCGAGGGGATCCAATAGTGTGTCCTCCGCGCCGTCTATGTCGGATGAGTGCCGCGTGATCCACCTCAATCTCGTGGCAAGACATGGGACTCGCGCACCTACCAAAAAGAGAATCAAAGAGCTGGATAGACTGGCGGTTCGGTTGAAGGCTCTTATCGATGAAGCAAAACAAGGGCCTGAAAGTGACTCCCTGAAAAAAATTCCTTCATGGATGAAA GGGTGGGAGTCACCCTGGAAAGGTAGGGTGAAAGGTGGTGAGCTGGTCAGTGAAGGGGAGGAAGAGCTATACAACCTTGCTATCAGAGTCAAGGAGAGGTTTCAAGGCCTATTTGATGAGGAATATCACCCTGATGTGTATTCAATAAGAGCAACTCAGGTTCCTCGGGCATCAGCTAGTGCAGTAGCATTTGGTTTGGGTCTACTTTCTGGGAAAGGGAAGCTTGGACCTGTGAAAAACCGTGCCTTTTCTGTTCTGAGTGAGAGTCGTGCAAGTGATATTTGTCTGCGATTCTTTGATAGCTGTGAAACATACAAGGACTACAGGAAAAGAAAGGAGCCTGATGTTGAAAAGCAAAAGGAACCAATTTTAGAACACGTCACATCGGCATTAGTTAACCGTTATCATCTCAATTTTACACCAAAAGATGTTTCTTCCCTCTGGTTCCTTTGCAAGCAGGAAGCATCTTTAATGAATATAACCAATCAAGCTTGTCAACTTTTTAATGAAGCTGAGGTTTATTTTCTAGAGTGGACAGATGATCTGGAGGGCTTTGTGCTAAAAGGTTATGGTGAGTCAATAAACTATCGGATGGGACTGCCATTGCTCAAGGACGTTGTCCAGTCAATGGAAGAAGCAATCGTTGCTAAAGAAGAAAACCACCCTGATGGTACATATGAGAAGGCAAGGCTCCGATTTGCACATGCTGAAACTGTTGTCCCTTTCTCATGTCTTCTTGGTCTTTTTCTTGAAGGATCAGATTTTGCGAAGATACAA CGGGAGGAATCATTGGACATACCTCCTGTGCCACCACAGGGAAGAAATTGGAAGGGCAGTGTTGTTGCACCTTTTGCTGGTAACAATATGTTGGCTTTGTACCAGTGCCCAGGAAAAACTGATGGTGGTAAGATTTCTCGGGATCAGAAGAGCTCATACTTCGTGCAGGTTATACACAATGAAGCTCCAGTTTCAATGCCGGGATGCGGGAACAAAGATTTCTGCCCATTTGAAGAGTTCAAGGAGAAGATAGTTGAACCCCACATGAAGCATGACTACGACGCCCTATGCAAGATAAGGCCGGTGGCAAGAGAGGAGCCTTCCTCCTTCAGTTCCAGGATGTCCAATTTCTTCCTAGGTTTGTTCTCGCAGAAAGGATACCGTGTTAGTGCTCAGGATGTGAAGTCGGAGCTGTAGGTTTATACTAGGCAGATGGTGCATCTTCTACCTTTCGCACTAAGCTGCTACTATCCATCTACCATGGATAACCAAGGGACTGACTCGTGGACTAAACTACGGTGTTTCTGTACTTGCAACCCTCAGTTTGATGAGCGAGTCCAATGTGTAACAACACGCTATCACTGGTGCCCCTCTTCTTTCAG ATAGAAGACGTTTGTTGATC AATGTAATCTTTGTTTTAATCTGGACTTTCTCTAGTGCTCAACTGCTGACTCTGTTGAGATCAAACTGAAAGTACTAGCACACGGTTGTGATTGTGGCCCTTGTGGTAGGTTGAGATCATGTACTACTACTTGGACAATCCGTTTCAAGCTTTCAGCTCAATCAATCCAGATTTGGGAGATCCCCA]
[+] EMBL OSS0760A [ AGCTCCCAAAATCAAATTAAATTAAAGAGAAAAAAAAGAAGAAGAGAAGGGCAAATCGATTCGCCATGGCTGCTCCCCGCACGCCTCTCCCCCTCGTCCTCCTCCTCGTCTCCGCCGCGCTCCTCGCGG GTCTCCCCTCTCGCCGGCGGCCGAGACCGGTGCCGCCGCGTTCGACGTCCGCCGCCACCTCTCCACCGTCACCAGGTACGATGTGGCGAGGGGATCCAATAGTGTGTCCTCCGCGCCGTCTATGTCGG ]
[+] EMBL CB676462 [ AGAAGAGAAGGGCAAATCGATTCGCCATGGCTGCTCCCCGCACGCCTCTCCCCCTCGTCCTCCTCCTCGTCTCCGCCGCGCTCCTCGCGGCGGCTCCCCTCTCGCCGGCGGCCGAGACCGGTGCCGCCGCGTTCGACGTCCGCCGCCACCTCTCCACCGTCACCAGGTACGATGTGGCGAGGGGATCCAATAGTGTGTCCTCCGCGCCGTCTATGTCGGATGAGTGCCGCGTGATCCACCTCAATCTCGTGGCAAGACATGGGACTCGCGCACCTACCAAAAAGAGAATCAAAGAGCTGGATAGACTGGCGGTTCGGTTGAAGGCTCTTATCGATGAAGCAAAACAAGGGCCTGAAAGTGACTCCCTGAAAAAAATTCCTTCATGGATGAAA GGGTGGGAGTCACCCTGGAAAGGTAGGGTGAAAGGTGGTGAGCTGGTCAGTGAAGGGGAGGAAGAGCTATACAACCTTGCTATCAGAGTCAAGGAGAGGTTTCAAGGCCTATTTGATGAGGAATATCACCCTGATGTGTATTCAATAAGAGCAACTCAGGTTCCTCGGGCATCAGCTAGTGCAGTAGCATTTGGTTTGGGTCTACTTTCTGGGAAAGGGAAGCTTGGACCTGTGAAAAACCGTGCCTTTTCTGTTCTGAGTGAGAGTCGTGCAAGTGATATTTGTCTGCGATTCTTTGATAGCTGTGAAACATACAAGGACTACAGGAAAAGAAAGGAGCCTGATGTTGAAAA CAAAAGGAACCAATTTTAGAACACGTCACATCGGCATTAGTTAACC ]
[+] EMBL CB636884 [ CTCCCCCTCGTCCTCCTCCTCGTCTCCGCCGCGCTCCTCGCGGCGGCTCCCCTCTCGCCGGCGGCCGAGACCGGTGCCGCCGCGTTCGACGTCCGCCGCCACCTCTCCACCGTCACCAGGTACGATGTGGCGAGGGGATCCAATAGTGTGTCCTCCGCGCCGTCTATGTCGGATGAGTGCCGCGTGATCCACCTCAATCTCGTGGCAAGACATGGGACTCGCGCACCTACCAAAAAGAGAATCAAAGAGCTGGATAGACTGGCGGTTCGGTTGAAGGCTCTTATCGATGAAGCAAAACAAGGGCCTGAAAGTGACTCCCTGAAAAAAATTCCTTCATGGATGAAAGGGGTGGGAGTCACCCTGGAAAGGTAGGGTGAAAGGTGGTGAGCTGGTCAGTGAAGGGGAGGAAGAGCTATACAACCTTGCTATCAGAGTCAAGGAGAGGTTTCAAGGCCTATTTGATGAGGAATATCACCCTGATGTGTATTCAATAAGAGCAACTCAGGTTCCTCGGGCATCAGC ]
[+] EMBL CB638465 [ CTCCCCCTCGTCCTCCTCCTCGTCTCCGCCGCGCTCCTCGCGGCGGCTCCCCTCTCGCCGGCGGCCGAGACCGGTGCCGCCGCGTTCGACGTCCGCCGCCACCTCTCCACCGTCACCAGGTACGATGTGGCGAGGGGATCCAATAGTGTGTCCTCCGCGCCGTCTATGTCGGATGAGTGCCGCGTGATCCACCTCAATCTCGTGGCAAGACATGGGACTCGCGCACCTACCAAAAAGAGAATCAAAGAGCTGGATAGACTGGCGGTTCGGTTGAAGGCTCTTATCGATGAAGCAAAACAAGGGCCTGAAAGTGACTCCCTGAAAAAAATTCCTTCATGGATGAAA GGGTGGGAGTCACCCTGGAAAGGTAGGGTGAAAGGTGGTGAGCTGGTCAGTGAAGGGGAGGAAGAGCTATACAACCTTGCTATCAGAGTCAAGGAGAGGTTTCAAGGCCTATTTGATGAGGAATATCACCCTGATGTGTATTCAATAAGAACAACTCAGGTTCCTCGGGCATCAGCTAGTGCAATAGCATTTGGTTTGGGTCT ]
[+] EMBL CF303355 [ TTGAAGGCTCTTATCGATGAAGCAAAACAAGGGCCTGAAAGTGACTCCCTGAAAAAAATTCCTTCATGGATGAAA GGGTGGGAGTCACCCTGGAAAGGTAGGGTGAAAGGTGGTGAGCTGGTCAGTGAAGGGGAGGAAGATCTATACAACCTTGCTATCAGAGTCAAGGAGAGGTTTCAAGGCCTATTTGATGAGGAATATCACCCTGATGTGTATTCAATAAGAGCAACTCAGGTTCCTCGGGCATCAGCTAGTGCAGTAGCATTTGGTTTGGGTCTACTTTCTGGGAAAGGGAAGCTTGGACCTGTGAAAAACCGTGCCTTTTCTGTTCTGAGTGAGAGTCGTGCAAGTGATATTTGTCTGCGATTCTTTGATAGCTGTGAAACATACAAGGACTACAGGAAAAGAAAGGAGCCTGATGTTGAAAAGCAAAAGGAACCAATTTTAGAACACGTCACATCGGCATTAGTTAACCGTTATCATCTCAATTTTACACCAAAAGATGTTTCTTCCCTCTGGTTCCTTTGCAAGCAGGAAGCATCTTTAATGAATATAACCAATCAAGCTTGTCAACTTTTTAA ]
[+] EMBL AU181453 [ CTCGGGCATCAGCTAGTGCAGTAGCATTTGGTTTGGGTCTACTTTCTGGGAAAGGGAAGCTTGGACCTGTGAAAAACCGTGCCTTTTCTGTTCTGAGTGAGAGTCGTGCAAGTGATATTTGTCTGCGATTCTTTGATAGCTGTGAAACATACAAGGACTACAGGAAAAGAAAGGAGCCTGATGTTGAAAAGCAAAAGGAACCAATTTTAGAACACGTCACATCGGCATTAGTTAACCGTTATCATCTCAATTTTACACCAAAAGATGTTTCTTCCCTCTGGTTCCTTTGCAAGCAGGAAGCATCTTTAATGAATATAACCAATCAAGCTTGTCAACTTTTTAATGAAGCTGAGGTTTATTTTCTAGAGTGGACAGATGATCTGGAGGGCTTTGTGCTAAAAGGTTATGGTGAGTCAATAAACTATCG ]
[-] EMBL CB676463 [ GAAGAAGCAATCGTTGCTAAAGAAGAAAACCACCCTGATGGTACATATGAGAAGGCAAGGCTCCGATTTGCACATGCTGAAACTGTTGTCCCTTTCTCATGTCTTCTTGGTCTTTTTCTTGAAGGATCAGATTTTGCGAAGATACAA CGGGAGGAATCATTGGACATACCTCCTGTGCCACCACAGGGAAGAAATTGGAAGGGCAGTGTTGTTGCACCTTTTGCTGGTAACAATATGTTGGCTTTGTACCAGTGCCCAGGAAAAACTGATGGTGGTAAGATTTCTCGGGATCAGAAGAGCTCATACTTCGTGCAGGTTATACACAATGAAGCTCCAGTTTCAATGCCGGGATGCGGGAACAAAGATTTCTGCCCATTTGAAGAGTTCAAGGAGAAGATAGTTGAACCCCACCTGAAGCATGACTACGACGCCCTATGCAAGATAAGGCCGGTGGCAAGAGAGGAGCCTTCCTCCTTCAGTTCCAGGATGTCCAATTTCTTCCTAGGTTTGTTCTCGCAGAAAGGATACCGTGTTAGTGCTCAGGATGTGAAGTCGGAGCTGTAGGTTTATACTAGGCAGATGGTGCATCTTCTACCTTTCGCACTAAGCTGCTACTATCCATCTACCATGGATAACCAAGGGACTGACTCGTGGACTAAACTACGGTGTTTCTGTACTTGCAACCCTCAGTTTGATGAGCGAGTCCAATGTGTAACAACACGCTATCACTGGTGCCCCTCTTCTTTCAG ATAGAAGACGTTTGTTGATC AATGTAATCTTTGTT ]
[+] EMBL AU068139 [ CTTCTTGGTCTTTTTCTTGAAGGATCAGATTTTGCGAAGATACAACCGGGAGGAATCATTGGACATACCTCCTGTGCCACCACAGGGAAGAAATTGGAAGGGCAGTGTTGTTGCACCTTTTGCTGGTAACAATATGTTGGCTTTGTACCAGTGCCCAGGAAAAACTGATGGTGGTAAGATTTCTCGGGATCAGAAGAGCTCATA TTCGTGCAGGTTATACACAATGAAGCTCCAGTTTCAATGCCGGGATGCGGGAACAAAGATTTCTGCCCATTTGAAGAGTTCAAGGAGAAGATAGTTGAACCCCACCTGAAGCATGACTACGACGCCCTATGCAAGATAAGGCCGGTGGCAAGAGAGGAGCCTTCCTCCTTCAGTTCCAGGATGTCCAATTTCTTCCTAGGTTTGTTCTCGCAGAAAGGATACCGTGTTAGTGCTCAGGATGTGAAGTCGGAGCTGTAGGTTTATACTAGGCAGATGGTGCATCTTCTACCTTTCGCACTAAGCTGCTACTATCCATCTACCATGGATAACCAAGGGACTGACTCGTGGACTAAACTACGGTGTTTCTGTACTTGCAACCCTCAGTTTGATGAGCGAGTCCAATGTGTAACAACACGCTATCACTGGTGCCCCTCTTCTTTCAG ATAGAAGACGTTTGTTGATC AATGTAATCTTTGTTTTAATCaaaaaaa ]
[-] EMBL CB636885 [ AAAAACTGATGGTGGTAAGATTTCTCGGGATCAGAAGAGCTCATACTTCGTGCAGGTTATACACAATGAAGCTCCAGTTTCAATGCCGGGATGCGGGAACAAAGATTTCTGCCCATTTGAAGAGTTCAAGGAGAAGATAGTTGAACCCCACCTGAAGCATGACTACGACGCCCTATGCAAGATAAGGCCGGTGGCAAGAGAGGAGCCTTCCTCCTTCAGTTCCAGGATGTCCAATTTCTTCCTAGGTTTGTTCTCGCAGAAAGGATACCGTGTTAGTGCTCAGGATGTGAAGTCGGAGCTGTAGGTTTATACTAGGCAGATGGTGCATCTTCTACCTTTCGCACTAAGCTGCTACTATCCATCTACCATGGATAACCAAGGGACTGACTCGTGGACTAAACTACGGTGTTTCTGTACTTGCAACCCTCAGTTTGATGAGCGAGTCCAATGTGTAACAACACGCTATCACTGGTGCCCCTCTTTTTTCAGAATAGAAGACGTTTGTTGATCAAATGTAATCTTT ]
consensusID : consensus_14661#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1521 fasta sequence
[AAAAAAGAAGAAGAGAAGGGCAAATCGATTCGCCATGGCTGCTCCCCGCACGCCTCTCCCCCTCGTCCTCCTCCTCGTCTCCGCCGCGCTCCTCGCGGCGGCTCCCCTCTCGCCGGCGGCCGAGACCGGTGCCGCCGCGTTCGACGTCCGCCGCCACCTCTCCACCGTCACCAGGTACGATGTGGCGAGGGGATCCAATAGTGTGTCCTCCGCGCCGTCTATGTCGGATGAGTGCCGCGTGATCCACCTCAATCTCGTGGCAAGACATGGGACTCGCGCACCTACCAAAAAGAGAATCAAAGAGCTGGATAGACTGGCGGTTCGGTTGAAGGCTCTTATCGATGAAGCAAAACAAGGGCCTGAAAGTGACTCCCTGAAAAAAAATTCCTTCATGGATGAAAGGGTGGGAGTCACCCTGGAAAGGTAGGGTGAAAGGTGGTGAGCTGGTCAGTGAAGGGGAGGAAGAGCTATACAACCTTGCTATCAGAGTCAAGGAGAGGTTTCAAGGCCTATTTGATGAGGAATATCACCCTGATGTGTATTCAATAAGAGCAACTCAGGTTCCTCGGGCATCAGCTAGTGCAGTAGCATTTGGTTTGGGTCTACTTTCTGGGAAAGGGAAGCTTGGACCTGTGAAAAACCGTGCCTTTTCTGTTCTGAGTGAGAGTCGTGCAAGTGATATTTGTCTGCGATTCTTTGATAGCTGTGAAACATACAAGGAAAAGAAAGGAGCCTGATGTTGAAAAGCAAAAGGAACCAATTTTAGAACACGTCACATCGGCATTAGTTAACCGTTATCATCTCAATTTTACACCAAAAGATGTTTCTTCCCTCTGGTTCCTTTGCAAGCAGAAGAGCTCATACTTCGTGCAGGTTATACACAATGAAGCTCCAGTTTCAATGCCGGGATGCGGGAACAAAGATTTCTGCCCATTTGAAGAGTTCAAGGAGAAGATAGTTGAACCCCACCTGAAGCATGACTACGACGCCCTATGCAAGATAAGGCCGGTGGCAAGAGAGGAGCCTTCCTCCTTCAGTTCCAGGATGTCCAATTTCTTCCTAGGTTTGTTCTCGCAGAAAGGATACCGTGTTAGTGCTCAGGATGTGAAGTCGGAGCTGTAGGTTTATACTAGGCAGATGGTGCATCTTCTACCTTTCGCACTAAGCTGCTACTATCCATCTACCATGGATAACCAAGGGACTGACTCGTGGACTAAACTACGGTGTTTCTGTACTTGCAACCCTCAGTTTGATGAGCGAGTCCAATGTGTAACAACACGCTATCACTGGTGCCCCTCTTCTTTCAG-ATAGAAGACGTTTGTTGATCAATGTAATCTTTGTTTTAATCTGGACTTTCTCTAGTGCTCAACTGCTGACTCTGTTGAGATCAAACTGAAAGTACTAGCACACGGTTGTGATTGTGGCCCTTGTGGTAGGTTGAGATCATGTACTACTACTTGGACAATCCGTTTCAAGCTTTCACTCAATCAATCCAGATTTGGGAGATCCCCAATTCGAGAT]
[+] EMBL AK064366 [AAAAAAGAAGAAGAGAAGGGCAAATCGATTCGCCATGGCTGCTCCCCGCACGCCTCTCCCCCTCGTCCTCCTCCTCGTCTCCGCCGCGCTCCTCGCGGCGGCTCCCCTCTCGCCGGCGGCCGAGACCGGTGCCGCCGCGTTCGACGTCCGCCGCCACCTCTCCACCGTCACCAGGTACGATGTGGCGAGGGGATCCAATAGTGTGTCCTCCGCGCCGTCTATGTCGGATGAGTGCCGCGTGATCCACCTCAATCTCGTGGCAAGACATGGGACTCGCGCACCTACCAAAAAGAGAATCAAAGAGCTGGATAGACTGGCGGTTCGGTTGAAGGCTCTTATCGATGAAGCAAAACAAGGGCCTGAAAGTGACTCCCTGAAAAAAAATTCCTTCATGGATGAAAGGGTGGGAGTCACCCTGGAAAGGTAGGGTGAAAGGTGGTGAGCTGGTCAGTGAAGGGGAGGAAGAGCTATACAACCTTGCTATCAGAGTCAAGGAGAGGTTTCAAGGCCTATTTGATGAGGAATATCACCCTGATGTGTATTCAATAAGAGCAACTCAGGTTCCTCGGGCATCAGCTAGTGCAGTAGCATTTGGTTTGGGTCTACTTTCTGGGAAAGGGAAGCTTGGACCTGTGAAAAACCGTGCCTTTTCTGTTCTGAGTGAGAGTCGTGCAAGTGATATTTGTCTGCGATTCTTTGATAGCTGTGAAACATACAAGGAAAAGAAAGGAGCCTGATGTTGAAAAGCAAAAGGAACCAATTTTAGAACACGTCACATCGGCATTAGTTAACCGTTATCATCTCAATTTTACACCAAAAGATGTTTCTTCCCTCTGGTTCCTTTGCAAGCAGAAGAGCTCATACTTCGTGCAGGTTATACACAATGAAGCTCCAGTTTCAATGCCGGGATGCGGGAACAAAGATTTCTGCCCATTTGAAGAGTTCAAGGAGAAGATAGTTGAACCCCACCTGAAGCATGACTACGACGCCCTATGCAAGATAAGGCCGGTGGCAAGAGAGGAGCCTTCCTCCTTCAGTTCCAGGATGTCCAATTTCTTCCTAGGTTTGTTCTCGCAGAAAGGATACCGTGTTAGTGCTCAGGATGTGAAGTCGGAGCTGTAGGTTTATACTAGGCAGATGGTGCATCTTCTACCTTTCGCACTAAGCTGCTACTATCCATCTACCATGGATAACCAAGGGACTGACTCGTGGACTAAACTACGGTGTTTCTGTACTTGCAACCCTCAGTTTGATGAGCGAGTCCAATGTGTAACAACACGCTATCACTGGTGCCCCTCTTCTTTCAG ATAGAAGACGTTTGTTGATCAATGTAATCTTTGTTTTAATCTGGACTTTCTCTAGTGCTCAACTGCTGACTCTGTTGAGATCAAACTGAAAGTACTAGCACACGGTTGTGATTGTGGCCCTTGTGGTAGGTTGAGATCATGTACTACTACTTGGACAATCCGTTTCAAGCTTTCACTCAATCAATCCAGATTTGGGAGATCCCCAATTCGAGAT]
[+] EMBL C26121 [ GGCAAATCGATTCGCCATGGCTGCTCCCCGCACGNCTCTCCCCCTCGTCCTCCTCCTCGTCTCCGCCGCGCTCCTCGCGG GGCTCCCCTCTCGCCGGCGGCCGAGACCGGTGCCGCCGCGTTCGACGTCCGCCGCCACCTCTCCACCGTCACCAGGTACGATGTGGCGAGGGGATCCAATAGTGTGTCCTCCGCGCCGTCTATGTCGGATGANTGCCGCGTGATCCACCTCAATCTCGTGGCAAGACATGGGACTCGCGCACCTACCAAAAAGAGAATNAAAGAGCTGGATAGACTGGCGGTTC ]
[+] EMBL D43143 [ TGGCTGCTCCCCGCACG CTCTCCCCCTCGTCCTCCTCCTCGTCTCCGCCGCGATCCTC ]
[+] EMBL AU100661 [ AGCTCCAGTTTCAATGCCGGGATGCGGGAACAAAGATTTCTGCCCATTTGAAGAGTTCAAGGAGAAGATAGTTGAACCCCACCTGAAGCATGACTACGACGCCCTATGCAAGATAAGGCCGGTGGCAAGAGAGGAGCCTTCCTCCTTCAGTTCCAGGATGTCCAATTTCTTCCTAGGTTTGTTCTCGCAGAAAGGATACCGTGTTAGTGCTCAGGATGTGAAGTCGGAGCTGTAGGTTTATACTAGGCAGATGGTGCATCTTCTACCTTTCGCACTAAGCTGCTACTATCCATCTACCATGGATAACCAAGGGACTGACTCGTGGACTAAACTACGGTGTTTCTGTACTTGCAACCCTCAGTTTGATGAGCGAGTCCAATGTGTAACAACACGCTATCACTGGTGCCCCTCTTNTTTCAG ATAGAAGACGTTTGTTGATCAATGTAATCTTTGTTTTAATC ]
[-] EMBL CB638466 [ CAGTTTCAATGCCGGGATGCGGGAACAAAGATTTCTGCCCATTTGAAGAGTTCAAGGAGAAGATAGTTGAACCCCACCTGAAGCATGACTACGACGCCCTATGCAAGATAAGGCCGGTGGCAAGAGAGGAGCCTTCCTCCTTCAGTTCCAGGATGTCCAATTTCTTCCTAGGTTTGTTCTCGCAGAAAGGATACCGTGTTAGTGCTCAGGATGTGAAGTCGGAGCTGTAGGTTTATACTAGGCAGATGGTGCATCTTCTACCTTTCGCACTAAGCTGCTACTATCCATCTACCATGGATAACCAAGGGACTGACTCGTGGACTAAACTACGGTGTTTCTGTACTTGCAACCCTCAGTTTGATGAGCGAGTCCAATGTGTAACAACACGCTATCACTGGTGCCCCTCTTCTTTCAGAATAGAAGACGTTTG ]
consensusID : consensus_14661#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 399 fasta sequence
[CTTACCCATGGGATTAACCAAGGGGACTGACTCGTGGACTAAAACTACGGNTGTTTCTGTACTTTGGCAACCCCTCAGTTTGGATGAGCGAGTCCCAATGTGTAAACAACACGGCTAACAACTGGGTGCCCCCTCCTTTCTTTCNAGATAGAAGACGTTTGTTTGATNAATGTAATCTTTTGTTTTAAATCTGGGANTTTNTCTAGGTGCTCNAACTGCTGACTCTGTTGAGATCAAACTGAAAGTACTAGCAACACGGGTTTNTTGATTTGTGGCNCCTTGTGGGTAGGNTTGAGGATNATGTACTNACTACTTGGGACAATCCCGTTTTCAAGTTCAGGTTCAANTCAATCCAGATTTGGGANATCCCCAATTCGAGATGAATCATGACAAAAAAAA]
[+] EMBL AU033001 [CTTACCCATGGGATTAACCAAGGGGACTGACTCGTGGACTAAAACTACGGNTGTTTCTGTACTTTGGCAACCCCTCAGTTTGGATGAGCGAGTCCCAATGTGTAAACAACACGGCTAACAACTGGGTGCCCCCTCCTTTCTTTCNAGATAGAAGACGTTTGTTTGATNAATGTAATCTTTTGTTTTAAATCTGGGANTTTNTCTAGGTGCTCNAACTGCTGACTCTGTTGAGATCAAACTGAAAGTACTAGCAACACGGGTTTNTTGATTTGTGGCNCCTTGTGGGTAGGNTTGAGGATNATGTACTNACTACTTGGGACAATCCCGTTTTCAAGTTCAGGTTCAANTCAATCCAGATTTGGGANATCCCCAATTCGAGATGAATCATGACAAAAAAAA]
consensusID : consensus_14661#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 248 fasta sequence
[AAATCGATTCNCCATGGCTGCTCCCCNCACNNCTCTCCCCCTCGNCCTCCTCCTCGTCTCCNCCGCGCTCCTCGCNGTNCCCCCTCTCGCCNGCNNCGAGACCGGTNCCNCCGCGTTCGACGTCCGCCGCCACCTCTCCACCGTCACCAGGTACGATGTNGCGAGGGGATCCAATAGTGTGTCCTCCNGGCCGTCTATGTCGGATGAGTGCCGCGTGATCCACCTCAATCTCGTGGCAAGACATNGGA]
[+] EMBL AU068138 [AAATCGATTCNCCATGGCTGCTCCCCNCACNNCTCTCCCCCTCGNCCTCCTCCTCGTCTCCNCCGCGCTCCTCGCNGTNCCCCCTCTCGCCNGCNNCGAGACCGGTNCCNCCGCGTTCGACGTCCGCCGCCACCTCTCCACCGTCACCAGGTACGATGTNGCGAGGGGATCCAATAGTGTGTCCTCCNGGCCGTCTATGTCGGATGAGTGCCGCGTGATCCACCTCAATCTCGTGGCAAGACATNGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14661#0 ------------------------------------------------------------
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 ------------------------------------------------------------
consensus_14661#2 CTTACCCATGGGATTAACCAAGGGGACTGACTCGTGGACTAAAACTACGGNTGTTTCTGT 60
consensus_14661#0 -AAGTAAAGCTCCCAAAATCAAATTAAATTAAAGAGAAAAAAAAGAAGAAGAGAAGGGCA 59
consensus_14661#3 -----------------------------------------------------------A 1
consensus_14661#1 --------------------------------------AAAAAAGAAGAAGAGAAGGGCA 22
consensus_14661#2 ACTTTGGCAACCCCTCAGTTTGGATGAGCGAGTCCCAATGTGTAAACAACACGGCTAACA 120
*
consensus_14661#0 AATCGATTCGCCATGGCTGCTCCCCGCACGCCTCTCCCCCTCGTCCTCCTCCTCGTCTCC 119
consensus_14661#3 AATCGATTCNCCATGGCTGCTCCCCNCACNNCTCTCCCCCTCGNCCTCCTCCTCGTCTCC 61
consensus_14661#1 AATCGATTCGCCATGGCTGCTCCCCGCACGCCTCTCCCCCTCGTCCTCCTCCTCGTCTCC 82
consensus_14661#2 ACTGGGTGCCCCCTCCTTTCTTTCNAGATAGAAGACGTTTGTTTGATNAATGTAATCTTT 180
* * * * * ** * * ** * * * * * ***
consensus_14661#0 -GCCGCGCTCCTCGCGGCGGCTCCCCTCTCGCCGGCGGCCGAGACCGGTGCCGCCGCGTT 178
consensus_14661#3 -NCCGCGCTCCTCGCNGTN--CCCCCTCTCGCCNGCNNC-GAGACCGGTNCCNCCGCGTT 117
consensus_14661#1 -GCCGCGCTCCTCGCGGCGGCTCCCCTCTCGCCGGCGGCCGAGACCGGTGCCGCCGCGTT 141
consensus_14661#2 TGTTTTAAATCTGGGANTTTNTCTAGGTGCTCNAACTGCTGACTCTGTTGAGATCAAACT 240
** * * * * * * ** * * * * *
consensus_14661#0 CGACGT-CCGCCGCCACCTCTCCACCGTCACCAGGTACGATGTGGCGAGGGGATCCAATA 237
consensus_14661#3 CGACGT-CCGCCGCCACCTCTCCACCGTCACCAGGTACGATGTNGCGAGGGGATCCAATA 176
consensus_14661#1 CGACGT-CCGCCGCCACCTCTCCACCGTCACCAGGTACGATGTGGCGAGGGGATCCAATA 200
consensus_14661#2 GAAAGTACTAGCAACACGGGTTTNTTGATTTGTGGCNCCTTGTGGGTAGGNTTGAGGATN 300
* ** * * *** * * ** * *** * *** **
consensus_14661#0 GTGTGTCCTCCGCGCCGTCTATGTCGGATGAGTGCCGCGTGATCCACCTCAATCTCGTGG 297
consensus_14661#3 GTGTGTCCTCCNGGCCGTCTATGTCGGATGAGTGCCGCGTGATCCACCTCAATCTCGTGG 236
consensus_14661#1 GTGTGTCCTCCGCGCCGTCTATGTCGGATGAGTGCCGCGTGATCCACCTCAATCTCGTGG 260
consensus_14661#2 ATGTACTNACTACTTGGGACAATCCCGTTTTCAAGTTCA-GGTTCAANTCAATCCAGATT 359
*** * * * * * * * * * ** ****** *
consensus_14661#0 CAAGACATGGGACTCGCGCACCTACCAAAAAGAGAATCAAAGAGCTGGATAGACTGGCGG 357
consensus_14661#3 CAAGACATNGGA------------------------------------------------ 248
consensus_14661#1 CAAGACATGGGACTCGCGCACCTACCAAAAAGAGAATCAAAGAGCTGGATAGACTGGCGG 320
consensus_14661#2 TGGGANATCCCCAATTCGAGATGAATCATGACAAAAAAAA-------------------- 399
** **
consensus_14661#0 TTCGGTTGAAGGCTCTTATCGATGAAGCAAAACAAGGGCCTGAAAGTGACTCCCTGAAAA 417
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 TTCGGTTGAAGGCTCTTATCGATGAAGCAAAACAAGGGCCTGAAAGTGACTCCCTGAAAA 380
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 AAATTCCTTCATGGATGAAAGGGTGGGAGTCACCCTGGAAAGGTAGGGTGAAAGGTGGTG 477
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 AAAATTCCTTCATGGATGAAAGGGTGGGAGTCACCCTGGAAAGGTAGGGTGAAAGGTGGT 440
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 AGCTGGTCAGTGAAGGGGAGGAAGAGCTATACAACCTTGCTATCAGAGTCAAGGAGAGGT 537
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 GAGCTGGTCAGTGAAGGGGAGGAAGAGCTATACAACCTTGCTATCAGAGTCAAGGAGAGG 500
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 TTCAAGGCCTATTTGATGAGGAATATCACCCTGATGTGTATTCAATAAGAGCAACTCAGG 597
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 TTTCAAGGCCTATTTGATGAGGAATATCACCCTGATGTGTATTCAATAAGAGCAACTCAG 560
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 TTCCTCGGGCATCAGCTAGTGCAGTAGCATTTGGTTTGGGTCTACTTTCTGGGAAAGGGA 657
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 GTTCCTCGGGCATCAGCTAGTGCAGTAGCATTTGGTTTGGGTCTACTTTCTGGGAAAGGG 620
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 AGCTTGGACCTGTGAAAAACCGTGCCTTTTCTGTTCTGAGTGAGAGTCGTGCAAGTGATA 717
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 AAGCTTGGACCTGTGAAAAACCGTGCCTTTTCTGTTCTGAGTGAGAGTCGTGCAAGTGAT 680
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 TTTGTCTGCGATTCTTTGATAGCTGTGAAACATACAAGGACTACAGGAAAAGAAAGGAGC 777
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 ATTTGTCTGCGATTCTTTGATAGCTGTGAAACATACAAGGAAAAGAAAGGAGCCTGATGT 740
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 CTGATGTTGAAAAGCAAAAGGAACCAATTTTAGAACACGTCACATCGGCATTAGTTAACC 837
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 TGAAAAGCAAAAGGAACCAATTTTAGAACACGTCACATCGGCATTAGTTAACCGTTATCA 800
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 GTTATCATCTCAATTTTACACCAAAAGATGTTTCTTCCCTCTGGTTCCTTTGCAAGCAGG 897
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 TCTCAATTTTACACCAAAAGATGTTTCTTCCCTCTGGTTCCTTTGCAAGCAGAAGAGCTC 860
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 AAGCATCTTTAATGAATATAACCAATCAAGCTTGTCAACTTTTTAATGAAGCTGAGGTTT 957
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 ATACTTCGTGCAGGTTATACACAATGAAGCTCCAGTTTCAATGCCGGGATGCGGGAACAA 920
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 ATTTTCTAGAGTGGACAGATGATCTGGAGGGCTTTGTGCTAAAAGGTTATGGTGAGTCAA 1017
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 AGATTTCTGCCCATTTGAAGAGTTCAAGGAGAAGATAGTTGAACCCCACCTGAAGCATGA 980
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 TAAACTATCGGATGGGACTGCCATTGCTCAAGGACGTTGTCCAGTCAATGGAAGAAGCAA 1077
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 CTACGACGCCCTATGCAAGATAAGGCCGGTGGCAAGAGAGGAGCCTTCCTCCTTCAGTTC 1040
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 TCGTTGCTAAAGAAGAAAACCACCCTGATGGTACATATGAGAAGGCAAGGCTCCGATTTG 1137
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 CAGGATGTCCAATTTCTTCCTAGGTTTGTTCTCGCAGAAAGGATACCGTGTTAGTGCTCA 1100
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 CACATGCTGAAACTGTTGTCCCTTTCTCATGTCTTCTTGGTCTTTTTCTTGAAGGATCAG 1197
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 GGATGTGAAGTCGGAGCTGTAGGTTTATACTAGGCAGATGGTGCATCTTCTACCTTTCGC 1160
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 ATTTTGCGAAGATACAACGGGAGGAATCATTGGACATACCTCCTGTGCCACCACAGGGAA 1257
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 ACTAAGCTGCTACTATCCATCTACCATGGATAACCAAGGGACTGACTCGTGGACTAAACT 1220
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 GAAATTGGAAGGGCAGTGTTGTTGCACCTTTTGCTGGTAACAATATGTTGGCTTTGTACC 1317
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 ACGGTGTTTCTGTACTTGCAACCCTCAGTTTGATGAGCGAGTCCAATGTGTAACAACACG 1280
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 AGTGCCCAGGAAAAACTGATGGTGGTAAGATTTCTCGGGATCAGAAGAGCTCATACTTCG 1377
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 CTATCACTGGTGCCCCTCTTCTTTCAGATAGAAGACGTTTGTTGATCAATGTAATCTTTG 1340
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 TGCAGGTTATACACAATGAAGCTCCAGTTTCAATGCCGGGATGCGGGAACAAAGATTTCT 1437
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 TTTTAATCTGGACTTTCTCTAGTGCTCAACTGCTGACTCTGTTGAGATCAAACTGAAAGT 1400
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 GCCCATTTGAAGAGTTCAAGGAGAAGATAGTTGAACCCCACCTGAAGCATGACTACGACG 1497
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 ACTAGCACACGGTTGTGATTGTGGCCCTTGTGGTAGGTTGAGATCATGTACTACTACTTG 1460
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 CCCTATGCAAGATAAGGCCGGTGGCAAGAGAGGAGCCTTCCTCCTTCAGTTCCAGGATGT 1557
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 GACAATCCGTTTCAAGCTTTCACTCAATCAATCCAGATTTGGGAGATCCCCAATTCGAGA 1520
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 CCAATTTCTTCCTAGGTTTGTTCTCGCAGAAAGGATACCGTGTTAGTGCTCAGGATGTGA 1617
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 T----------------------------------------------------------- 1521
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 AGTCGGAGCTGTAGGTTTATACTAGGCAGATGGTGCATCTTCTACCTTTCGCACTAAGCT 1677
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 ------------------------------------------------------------
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 GCTACTATCCATCTACCATGGATAACCAAGGGACTGACTCGTGGACTAAACTACGGTGTT 1737
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 ------------------------------------------------------------
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 TCTGTACTTGCAACCCTCAGTTTGATGAGCGAGTCCAATGTGTAACAACACGCTATCACT 1797
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 ------------------------------------------------------------
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 GGTGCCCCTCTTCTTTCAGATAGAAGACGTTTGTTGATCAATGTAATCTTTGTTTTAATC 1857
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 ------------------------------------------------------------
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 TGGACTTTCTCTAGTGCTCAACTGCTGACTCTGTTGAGATCAAACTGAAAGTACTAGCAC 1917
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 ------------------------------------------------------------
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 ACGGTTGTGATTGTGGCCCTTGTGGTAGGTTGAGATCATGTACTACTACTTGGACAATCC 1977
consensus_14661#3 ------------------------------------------------------------
consensus_14661#1 ------------------------------------------------------------
consensus_14661#2 ------------------------------------------------------------
consensus_14661#0 GTTTCAAGCTTTCAGCTCAATCAATCCAGATTTGGGAGATCCCCA 2022
consensus_14661#3 ---------------------------------------------
consensus_14661#1 ---------------------------------------------
consensus_14661#2 ---------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||