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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14678#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1483 fasta sequence
[AGGAAGGCGGAGAGAGAAGAAGTTTTCCGCATCGCGACCGCGCGGACGAGGCAGGCTGGCCGTCGGATCGGGCTGACCGCGTCTCGTTTAGAAATATCCTCGTGACTTCTCCTCCTCCTGAGTCGTCGTCGTCGTGGTGGTGCTCGTCCTCCTCGGCGGCGGAGGCTTCGGGGGGCGGGAGATCCGGGCGGCGGAGATGGCGAAGGGAGGGGGGGCGCTGCTGCCGATGTCCGCGGAGGCGGGGAAGGGCAACGGGGGCGGGGGCGGCGGCGGCGACGATGCCGCGCTGTTCAAGGGGTCCGCCATGACGCGGCGCGGCGCGGTCGCCGCGCTCTCCTACATGGCCTGCTCCGTGTTGCTAGTGATGTTTAACAAAGCAGCACTGTCTTCATATAATTTCCCCTGTGCAAATGTCATTACGCTCCTTCAGATGGTGTGCTCAACAGGCCTTCTTTATGTTCTGAGGCGGCTAAAGATAATTTCATTTACAAATAGCGAGCCATCCGTGCCTTCTGATGCGTTATTCTTCGTTCCGTTCAGAATACTGTTGCGTACTACACCTCTTTCTTTGGCTTATTTACTCTATATGTTAGCTTCAATGGAATCTGTGCGTGGAGTCAATGTTCCGATGTATACAACACTGAGGCGCACAACAGTAGTCTTTACAATGACAATGGAGT-ATTTCTTGGC-AAAACAGAAGCATACGCCACCTATAATCGGCAGCGTGGCTTTGATTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGATGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTACTATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG-CT-GCTATTCTCATGCATGCTAGCTTTTCTGCTA-AACTACACTATCTTCTGGAATACAATCC-TGAATT-CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAA-TTG-GCTGGGTTCTG-T-TTGGTGGGCTTCCT-TTTGATCTGC-TTAATG-TTATCGGGCAAGGTCTTGGCTTTCT-TGGCTCTGGCTTGTA-TGCCTACTGCAAGATCAAAGGGAAGTAG-ATACGGATGTCCA-GTGGGGGTCTGAAGGAGAGTAGATATTGAAG-TTTATTTTGGAGGGGCCAATGTGCCATA-CTGAA-GTAGA-GTTCGTGCTGTTTGCTCCTGCATAT-GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAA-TTTCGAGTGAACA-GCCAT-TGTTTTACA-TTTTTA-CAAGGAAATAGAA-TATAACAAGATTTCAGTATTAAAAAAAAAAAA]
[+] EMBL AK066917 [AGGAAGGCGGAGAGAGAAGAAGTTTTCCGCATCGCGACCGCGCGGACGAGGCAGGCTGGCCGTCGGATCGGGCTGACCGCGTCTCGTTTAGAAATATCCTCGTGACTTCTCCTCCTCCTGAGTCGTCGTCGTCGTGGTGGTGCTCGTCCTCCTCGGCGGCGGAGGCTTCGGGGGGCGGGAGATCCGGGCGGCGGAGATGGCGAAGGGAGGGGGGGCGCTGCTGCCGATGTCCGCGGAGGCGGGGAAGGGCAACGGGGGCGGGGGCGGCGGCGGCGACGATGCCGCGCTGTTCAAGGGGTCCGCCATGACGCGGCGCGGCGCGGTCGCCGCGCTCTCCTACATGGCCTGCTCCGTGTTGCTAGTGATGTTTAACAAAGCAGCACTGTCTTCATATAATTTCCCCTGTGCAAATGTCATTACGCTCCTTCAGATGGTGTGCTCAACAGGCCTTCTTTATGTTCTGAGGCGGCTAAAGATAATTTCATTTACAAATAGCGAGCCATCCGTGCCTTCTGATGCGTTATTCTTCGTTCCGTTCAGAATACTGTTGCGTACTACACCTCTTTCTTTGGCTTATTTACTCTATATGTTAGCTTCAATGGAATCTGTGCGTGGAGTCAATGTTCCGATGTATACAACACTGAGGCGCACAACAGTAGTCTTTACAATGACAATGGAGT ATTTCTTGGC AAAACAGAAGCATACGCCACCTATAATCGGCAGCGTGGCTTTGATTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGATGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTACTATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG CT GCTATTCTCATGCATGCTAGCTTTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TGAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCA GTGGGGGTCTGAAGGAGAGTAGATATTGAAG TTTATTTTGGAGGGGCCAATGTGCCATA CTGAA GTAGA GTTCGTGCTGTTTGCTCCTGCATAT GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAA TTTCGAGTGAACA G ]
[+] EMBL CF196274 [ GAGAGAAGAAGTTTTCCGCATCGCGACCGCGCGGACGAGGCAGGCTGGCCGTCGGATCGGGCTGACCGCGTCTCGTTTAGAAATATCCTCGTGACTTCTCCTCCTCCTGAGTCGTCGTCGTCGTGGTGGTGCTCGTCCTCCTCGGCGGCGGAGGCTTCGGGGGGCGGGAGATCCGGGCGGCGGAGATGGCGAAGGGAGGGGGGGnnn ]
[+] EMBL CB668769 [ GCATCGCGACCGCGCGGACGAGGCAGGCTGGCCGTCGGATCGGGCTGACCGCGTCTCGTTTAGAAATATCCTCGTGACTTCTCCTCCTCCTGAGTCGTCGTCGTCGTGGTGGTGCTCGTCCTCCTCGGCGGCGGAGGCTTCGGGGGGCGGGAGATCCGGGCGGCGGAGATGGCGAAGGGAGGGGGGGCGCTGCTGCCGATGTCCGCGGAGGCGGGGAAGGGCAACGGGGGCGGGGGCGGCGGCGGCGACAATGCCGCGCTGTTCAAGGGGTCCGCCATGACGCGGCGCGGGGCGGTCGCCGCGCTCTCCTACATGGCCTGCTCCGGGTTGCTAGTGATGTTTAACAAAGCAGCACTGTCTTCATATAATTTCCCCTGTGCAAATGTCATTACGCTCCTTCAGATGGTGTGCTCAACAGGCCTTCTTTATGTTCTGAGGCGGCTACAGATAATTTCATTTACAAATAGCGAGCCATCCGTGCCTTCTGATGCGTTATTCTTCGTTCCGTTCAGAATACTGTTGCGTACTACACCTCTTTCTTTGGCTTATTTACTCTATATGATAGCTTCAATGGAATCTGTGCGTGGAGTCAGTGTTCCGATGTATACAACACTGAGGCGCACAAGAGTAGTCTTTACAATGACAATGGAGT ATTTCTTGGC ACAACAGAAGCATACGCCACCTATAATCTGCAGCGTGGCTATGATTGTATTTGG ]
[+] EMBL CB667431 [ GGCTGACCGCGTCTCGTTTAGAAATATCCTCGTGACTTCTCCTCCTCCTGAGTCGTCGTCGTCGTGGTGGTGCTCGTCCTCCTCGGCGGCGGAGGCTTCGGGGGGCGGGAGATCCGGGCGGCGGAGATGGCGAAGGGAGGGGGGGCGCTGCTGCCGATGTCCGCGGAGGCGGGGAAGGGCAACGGGGGCGGGGGCGGCGGCGGCGACGATGCCGCGCTGTTCAAGGGGTCCGCCATGACGCGGCGCGGCGCGGTCGCCGCGCTCTCCTACATGGCCTGCTCCGTGTTGCTAGTGATGTTTAACAAAGCAGCACTGTCTTCATATAATTTCCCCTGTGCAAATGTCATTACGCTCCTTCAGATGGTGTGCTCAACAGGCCTTCTTTATGTTCTGAGGCGGCTAGAGATAATTTCATTTACAAATAGCGAGCCATCCGTGCCTTCTGATGCGTTATTCTTCGTTCCGTTCAGAATACTGTTGCGTACTACACCTCTTTCTTTGGCTTATTTACTCTATATGTTAGCTTCAATGGAATCTGTGCGTGGAGTCAATGTTCCGATGTATACAACACTGAGGCGCACAACAGTAGTCTTTACAATGACAATGGAGTGATTTCTTGGCGAAAACATAAGCATACGC ]
[+] EMBL CB668420 [ AGGCCGTGAAGGGCAACGGGGGCGGGGGCGGCGGCGGCGACGATGCCGCGCTGTTCAAGGGGTCCGCCATGACGCGGCGCGGCGCGGTCGCCGCGCTCTCCTACATGGCCTGCTCCGTGTTGCTAGTGATGTTTAACAAAGCAGCACTGTCTTCATATAATTTCCCCTGTGCAAATGTCATTACGCTCCTTCAGATGGTGTGCTCAACAGGCCTTCTTTATGTTCTGAGGCGGCTAAAGATAATTTCATTTACAAATAGCGAGCCATCCGTGCCTTCTGATGCGTTATTCTTCGTTCCGTTCAGAATACTGTTGCGTACTACACCTCTTTCTTTGGCTTATTTACTCTATATGTTAGCTTCAATGGAATCTGTGCGTGGAGTCAATGTTCCGATGTATACAACACTGAGGCGCACAACAGTAGTCTTTACAATGACAATGGAGT ATTTCTTGGC AAAACAGAAGCATACGCCACCTATAATCGGCAGCGTGGCTTTGATTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGATGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTACTATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGNGTTTCAGGCGGTG CT GCTATTCTCATGCATGCT ]
[+] EMBL CB666410 [ GTTGCGTACTACACCTCTTTCTTTGGCTTATTTACTCTATATGTTAGCTTCAATGGAATCTGTGCGTGGAGTCAATGTTCCGATGTATACAACACTGAGGCGCACAACAGTAGTCTTTACAATGACAATGGAGT ATTTCTTGGC AAAACAGAAGCATACGCCACCTATAATCGGCAGCGTGGCTTTGATTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGATGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTACTATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG CT GCTATTCTCATGCATGCTAGCTTTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TGAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCA GTGGGGGTCTGAAGGAGAGTAGATATTGAAG TTTATTTTGGAGGGGCCAATGTGCCATA CTGAA GTAGA GTTCGTGCTGTTTGCTCCTGCATAT GGGAa ]
[-] EMBL CB667432 [ GAGT ATTTCTTGGC AAAACAGAAGCATACGCCACCTATAATCGGCAGCGTGGCTTTGATTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGATGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTACTATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG CT GCTATTCTCATGCATGCTAGCTTTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TGAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCA GTGGGGGTCTGAAGGAGAGTAGATATTGAAG TTTATTTTGGAGGGGCCAATGTGCCATA CTGAA GTAGA GTTCGTGCTGTTTGCTCCTGCATAT GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAA TTTCGAGTGAACA GCCAT TGTTTTACA TTTTTA CGAGGAAATAGAA TATAACAAGATTTCAGTATTAAAAAAAAga ]
[-] EMBL CB668770 [ AGCATACGCCACCTATAATCGGCAGCGTGGCTTTGATTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGATGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTACTATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG CT GCTATTCTCATGCATGCTAGCTTTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TGAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCA GTGGGGGTCTGAAGGAGAGTAGATATTGAAG TTTATTTTGGAGGGGCCAATGTGCCATA CTGAA GTAGA GTTCGTGCTGTTTGCTCCTGCATAT GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAA TTTCGAGTGAACA GCCAT TGTTTTACA TTTTGA CAAGGAAATAGAA TATAACAAGATTTCAGTA AAAAAAAAga ]
[-] EMBL CB666411 [ GCCACCTATAATCGGCAGCGTGGCTTTGATTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGATGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTACTATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG CT GCTATTCTCATGCATGCTAGCTTTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TGAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTATTCACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCA GTGGGGGTCTGAAGGAGAGTAGATATTGAAG TTTATTTTGGAGGGGCCAATGTGCCATA CTGAA GTAGA GTTCGTGCTGTTTGCTCCTGCATAT GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGCCTTCAA ]
[+] EMBL CA767465 [ TTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGGTGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTACTATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG CT GCTATTCTCATGCATGCTAGCTTTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TAAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCA GTGGGGGTCTAAAGGAGAGTAGATATTGAAG NTTATTTTGGAGGGGCCAATGTGCCATA CTGAA GTAGA GTTCGTGCTGNTTGCTCCTGCATATGGGGAGAGAAATTTTGTAGGGTTTCCTGNATGGATTTAACACTTCAGTCCTCCTGAATACAATTTTCGAGTGAACA GNCATCGGTTTTACATTTTTTA CAAGGGAATAGAA TA ]
[-] EMBL CA762331 [ AACAGCTGTTTACCTTGCTACTATAAACNGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG CT GCTATTCTCATGCATGCTAGCTTTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TGAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTTACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCA GTGGGGGTCTAAAGGAGAGTAGATATTGAAG TTTATTTTGGAGGGGCCAATGTGCCATA CTGAA GTAGA GTTCGTGCTGTTTGCTCCTGCATAT GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAA TTTCGAGTGAACACGCCAT TGTTTTACA TTTTTA CAAGGAAATAGAA TATAACAAGATTTCAGTATTAAAAAAAAAAAA]
[+] EMBL C26271 [ AACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG CT GCTATTCTCATGCATGCTAGCTTTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TGAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TNCCTACTGNAAGATCAAAGGGAAGTAG ATACGGA ]
[+] EMBL BM421613 [ ATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATT CCCTGGGTTTCAGGCGGTGTCTGGCTTTTCTCATGCATGCTAGCTGTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TGAATTGCTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCACGTGGGGGTCTGAAGGAGAGTAGATATTGAAG TTTATTTTGGAGGGGCCAATGTGCCATACCTGAA GTAGA GTTCGT CTGTTTGCTCCTGCATAT GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATAC A TTTCGAGTGAACA GCC T TGTTTTACA TTTTTACCAAGGAAATAGAACTATNACAAGATTTCAGTATTAAAAAAAAAA ]
[+] EMBL BM421118 [ CTCTATTCCCCTGGNTTTCAGGCGGTG CT GCTTTTCTCATGCATGCTAGCTTTTCTGCTATAACTACACTATCTTCTGGAATACAATCCGTGAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAACTTGCGCTGGGTTCTGCTATTGGTGGGCTTCCTCTTTGATCTGCGTTAATGCTTATCGGGCAAGGTCTTGGCTTTCTGTGGCTCTGGCTTGTACTGCCTACTGCAAGATCAAAGGGAAGTAGAATACGGATGTCCACGTGGGGGTCTGAAGGAGAGTAGATATTGAAGCTTTATTTTGGAGGGGCCAATGTGCCATA CTGAACGTAGACGTTCGTGCTGTTTGCTCCTGCATAT GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAA TTTCGAGTGAACA GCCAT TGTTTTACA TTTTTA CAAGGAAATAGAA TATAACAAGATTTCAGTATTCAAAAAAAAA ]
[+] EMBL AU075788 [ GGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCA GTGGGGGTCTGAAGGAGAGTAGATATTGAAG TTTATTTTGGAGGGGCCAATGTGCCATA CTGAA GTAGA GTTCGTGCTGTTTGCTCCTGCATAT GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAA TTTCGAGTGAACA GCCAT TGTTTTACA TTTTTA CAAGGAAATAGAA TATAACAAGATTTCAaaan ]
consensusID : consensus_14678#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 484 fasta sequence
[TGGANAGGGTATGAACAGCCTGGCATGCCAGTGTGCCTTGCCACTGCCTATCCTCATACTGTGCAAGTGTGGTGTGTGTTGTAGTGTCCTTTCATATTTACCTTTTTCTGCAGGATTTCTTCACCGTCGGAATTGGCTGGGTTCTGTTTGGTGGGCTTCCTTTTGATCTGCTTAATGTTATCGGGCAGGTCTTGGCTTTCTTGGCTCTGGCTTGTATGCCTACTGCAAGATCAAAGGGAAGTAGATACGGATGTCCAGTGGGGGTCTGAAGGAGAGTAGATATTGAAGTTTATTTTGGAGGGGCCCATGTGCCATACTGAAGTAGAGTTCGTGCTGTTTGCTCCTGCATATGGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAATTTCGAGTGAACAGCCCTTGTTTTACATTTTTACAAGGACNATAGAATATAACAGATTTCCAGTAAAAAAAA]
[+] EMBL BQ906285 [TGGANAGGGTATGAACAGCCTGGCATGCCAGTGTGCCTTGCCACTGCCTATCCTCATACTGTGCAAGTGTGGTGTGTGTTGTAGTGTCCTTTCATATTTACCTTTTTCTGCAGGATTTCTTCACCGTCGGAATTGGCTGGGTTCTGTTTGGTGGGCTTCCTTTTGATCTGCTTAATGTTATCGGGCAGGTCTTGGCTTTCTTGGCTCTGGCTTGTATGCCTACTGCAAGATCAAAGGGAAGTAGATACGGATGTCCAGTGGGGGTCTGAAGGAGAGTAGATATTGAAGTTTATTTTGGAGGGGCCCATGTGCCATACTGAAGTAGAGTTCGTGCTGTTTGCTCCTGCATATGGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAATTTCGAGTGAACAGCCCTTGTTTTACATTTTTACAAGGACNATAGAATATAACAGATTTCCAGTAAAAAAAA]
consensusID : consensus_14678#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 287 fasta sequence
[GCTTCCTTTTGATCTGCTTAATGTTATCGGGCAAGGNTCCTGGCCTTCCTTGCTCCTGGCTTGTAANCCNACTGCCAGATCCAANGGAAGTTAGATTACGGATGTCCCANTGGGGGTCTGAAAGGAGAAGTAGATATTGAAAGTTTTAATTTTGGAGGGCCCAATGTGCCATACTGAAGTAGAGTTCGTGCTGTTTGCTCCTGCATATGGGAGAGAAATTTTGTAGGTTTTCNCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAATTTCGAGTGAACAAAAA]
[+] EMBL AU108239 [GCTTCCTTTTGATCTGCTTAATGTTATCGGGCAAGGNTCCTGGCCTTCCTTGCTCCTGGCTTGTAANCCNACTGCCAGATCCAANGGAAGTTAGATTACGGATGTCCCANTGGGGGTCTGAAAGGAGAAGTAGATATTGAAAGTTTTAATTTTGGAGGGCCCAATGTGCCATACTGAAGTAGAGTTCGTGCTGTTTGCTCCTGCATATGGGAGAGAAATTTTGTAGGTTTTCNCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAATTTCGAGTGAACAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14678#0 AGGAAGGCGGAGAGAGAAGAAGTTTTCCGCATCGCGACCGCGCGGACGAGGCAGGCTGGC 60
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 ------------------------------------------------------------
consensus_14678#0 CGTCGGATCGGGCTGACCGCGTCTCGTTTAGAAATATCCTCGTGACTTCTCCTCCTCCTG 120
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 ------------------------------------------------------------
consensus_14678#0 AGTCGTCGTCGTCGTGGTGGTGCTCGTCCTCCTCGGCGGCGGAGGCTTCGGGGGGCGGGA 180
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 ------------------------------------------------------------
consensus_14678#0 GATCCGGGCGGCGGAGATGGCGAAGGGAGGGGGGGCGCTGCTGCCGATGTCCGCGGAGGC 240
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 ------------------------------------------------------------
consensus_14678#0 GGGGAAGGGCAACGGGGGCGGGGGCGGCGGCGGCGACGATGCCGCGCTGTTCAAGGGGTC 300
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 ------------------------------------------------------------
consensus_14678#0 CGCCATGACGCGGCGCGGCGCGGTCGCCGCGCTCTCCTACATGGCCTGCTCCGTGTTGCT 360
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 ------------------------------------------------------------
consensus_14678#0 AGTGATGTTTAACAAAGCAGCACTGTCTTCATATAATTTCCCCTGTGCAAATGTCATTAC 420
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 ------------------------------------------------------------
consensus_14678#0 GCTCCTTCAGATGGTGTGCTCAACAGGCCTTCTTTATGTTCTGAGGCGGCTAAAGATAAT 480
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 ------------------------------------------------------------
consensus_14678#0 TTCATTTACAAATAGCGAGCCATCCGTGCCTTCTGATGCGTTATTCTTCGTTCCGTTCAG 540
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 ------------------------------------------------------------
consensus_14678#0 AATACTGTTGCGTACTACACCTCTTTCTTTGGCTTATTTACTCTATATGTTAGCTTCAAT 600
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 ------------------------------------------------------------
consensus_14678#0 GGAATCTGTGCGTGGAGTCAATGTTCCGATGTATACAACACTGAGGCGCACAACAGTAGT 660
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 ------------------------------------------------------------
consensus_14678#0 CTTTACAATGACAATGGAGTATTTCTTGGCAAAACAGAAGCATACGCCACCTATAATCGG 720
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 ------------------------------------------------------------
consensus_14678#0 CAGCGTGGCTTTGATTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGA 780
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 ------------------------------------------------------------
consensus_14678#0 TGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTAC 840
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 ------------------------------------------------------------
consensus_14678#0 TATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGG 900
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 ------------------------------------------------------------
consensus_14678#0 ACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGC 960
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 ------------------------------------------------------------
consensus_14678#0 TATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTGCTGCTATTCT--CATGC 1018
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 --------------------------------TGGANAGGGTATGAACAGCCTGGCATGC 28
consensus_14678#0 ATGCTAGCTTTTCTGCTAAACTACACTATCTTCTGGAATACAATCCTGAATTCTGCACTC 1078
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 CAGTGTGCCTTGCCACTGCCTATCCTCATACTGTGCAAGT--GTGGTGTGTGTTGTAGTG 86
consensus_14678#0 ACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAATTGGCTGGGTTCTG 1138
consensus_14678#2 ------------------------------------------------------------
consensus_14678#1 TCCTTTCATATTTACCTTTTTCTGCAGGATTTCTTCACCGTCGGAATTGGCTGGGTTCTG 146
consensus_14678#0 TTTGGTGGGCTTCCTTTTGATCTGCTTAATGTTATCGGGCAAGGT-CTTGGCTTTCTTGG 1197
consensus_14678#2 --------GCTTCCTTTTGATCTGCTTAATGTTATCGGGCAAGGNTCCTGGCCTTCCTTG 52
consensus_14678#1 TTTGGTGGGCTTCCTTTTGATCTGCTTAATGTTATCGGGCA-GGT-CTTGGCTTTCTTGG 204
********************************* ** * **** *** * *
consensus_14678#0 CTC-TGGCTTGTATGCCTACTGCAAGATCAAAGGGAAGT-AGAT-ACGGATGTCC-AGTG 1253
consensus_14678#2 CTCCTGGCTTGTAANCCNACTGCCAGATCCAANGGAAGTTAGATTACGGATGTCCCANTG 112
consensus_14678#1 CTC-TGGCTTGTATGCCTACTGCAAGATCAAAGGGAAGT-AGAT-ACGGATGTCC-AGTG 260
*** ********* ** ***** ***** ** ****** **** ********** * **
consensus_14678#0 GGGGTCTGAAGGAG--AGTAGATATTGAAGTTT---ATTTTGGAGGGGCCAATGTGCCAT 1308
consensus_14678#2 GGGGTCTGAAAGGAGAAGTAGATATTGAAAGTTTTAATTTTGGAGGGCCCAATGTGCCAT 172
consensus_14678#1 GGGGTCTGAAGGAG--AGTAGATATTGAAGTTT---ATTTTGGAGGGGCCCATGTGCCAT 315
********** * ************* ** *********** ** *********
consensus_14678#0 ACTGAAGTAGAGTTCGTGCTGTTTGCTCCTGCATATGGGAGAGAAATTTTGTAGGTTTTC 1368
consensus_14678#2 ACTGAAGTAGAGTTCGTGCTGTTTGCTCCTGCATATGGGAGAGAAATTTTGTAGGTTTTC 232
consensus_14678#1 ACTGAAGTAGAGTTCGTGCTGTTTGCTCCTGCATATGGGAGAGAAATTTTGTAGGTTTTC 375
************************************************************
consensus_14678#0 C-TGTATGTATTTAACACTTCAGTCCTCCTGAATACAATTTCGAGTGAACAGCCATTGTT 1427
consensus_14678#2 NCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAATTTCGAGTGAACAAAAA----- 287
consensus_14678#1 C-TGTATGTATTTAACACTTCAGTCCTCCTGAATACAATTTCGAGTGAACAGCCCTTGTT 434
*************************************************
consensus_14678#0 TTACATTTTTACAAGGA-AATAGAATATAACAAGATTTCAGTATTAAAAAAAAAAAA 1483
consensus_14678#2 ---------------------------------------------------------
consensus_14678#1 TTACATTTTTACAAGGACNATAGAATATAACAGATTTCCAGTAAAAAAAA------- 484
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||