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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14682#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1996 fasta sequence
[AATACTTTATCCTGTTGCTGATGCGACAACCTTCTTTACTGACTTGCATTATATGCTCCGTGTGATTTCTGCTGGAAACACAAGAACCGTGTGCCATAACCGGTTAAATCTTTTAGAGCATAAATTCAAATTTCATTTGATGTTAAACGCGGATAGGGAGTTTCTTGCCCAGAAGACTGCACCACATCGTGATTTTTACAATGTCAGGAAGGTTGATACTCATGTACACCACTCAGCGTGCATGAATCAAAAACACTTGCTGAGATTTATAAAATCCAAACTAAGGAAAGAACCTGATGAGGTTGTCATTTTCAGAGACGGCACTTATATGACTCTGAAGGAGGTTTTTGAGAGCTTGGACTTAACTGGGTATGACTTGAATGTTGATTTACTAGATGTCCATGCGGACAAAAGTACATTTCATCGTTTTGACAAATTCAACCTTAAGTACAATCCGTGTGGCCAAAGTAGGCTCAGAGAGATTTTCCTCAAACAGGACAATCTTATCCAAGGTCGTTTTCTTGCCGAGCTAACAAAGCAAGTTTTCTCCGACCTTACAGCAAGTAAATACCAGATGGCTGAATATAGGATTTCAATCTATGGGAGGAAGCAAAGTGAATGGGACAACCTTGCAAGCTGGATAGTGAACAATGAATTGTCCAGTGAAAATGTTGTCTGGCTGGTTCAGATCCCACGCTTATATAATGTGTACAAGGAAATGGGTATTGTTACATCATTCCAAACTCTTCTGGACAACATTTTCCTTCCTCTGTTTGAGGTCACCATTGATCCAGCTTCTCATCCGCAGCTTCACGTCTTCCTAAAGCAGGTTGTAGGGTTAGATTTGGTTGATGATGAGAGTAAACCTGAAAGGCGTCCAACAAAGCATATGCCTACACCTGAACAATGGACCAATGTCTTCAACCCAGCATTTTCATATTATGCATATTACTGCTATGCTAACTTATACACACTCAATAAGTTGCGTGAATCAAAAGGGATGACCACAATCAAATTCCGTCCACATGCTGGCGAGGCTGGAGACATCGATCACTTGGCAGCAACATTTCTTCTTTGTCACAATATATCGCATGGAATCAACTTAAGGAAATCTCCTGTGCTTCAATATCTATACTATCTTGGCCAGATTGGTCTGGCAATGTCCCCATTAAGCAACAACTCCTTGTTTCTTGATTACCACCGGAATCCTTTCCCAATGTTTTTCCAACGAGGCCTGAATGTTTCCCTGTCAACGGATGATCCATTGCAAATTCACCTGACAAAAGAGCCATTGGTGGAAGAATACAGCATTGCTGCTTCACTCTGGAAGCTCAGTTCTTGTGATTTATGTGAAATAGCTAGAAACTCTGTCTATCAATCAGGGTTTTCACATGCTCTCAAGGCACACTGGATTGGCAAGAACTATTACAAAAGAGGACCTACAGGGAACGATATTCATAAAACTAATGTGCCTCACATCAGGGTTCAGTTTAGGGAC-TTGA-TTTGGAGAGATGAGATGCGTC-TTGTATACCTAAACAATGTCATCTTACCTGACGAGGTGGACCAGTAACATGTACCTGGTGTATATGGCGCGGTTGCCATGGGAGTTACATTTCATGTTTGGTTATTGGAAGTCAGCATGAGAAGTGTTGTGATACACATCGTGTCCGGGTTCCAAGCCGACGAGAGAGAAACTTCAAACCAAGTAGTGCCCCCAAAAAGCACAACCAAAAGTACAACAAGATATACACAATAAAATTGGATCTTACTA-GATTA-GGAAGGATGAAGCGGCTCAGC-TGGGTGCTGGATTTTGGGGTGTAGTGTAGGGGAGGCAGGCAAACAATTGC-TTCGG-CGTGATTGTAATTGTGCAGCCTCTCGTTTGTGAAGGATGCTATACCAACATTGCATGTACTTTAACTGGTCTTACACAGTTATACTCCTGCGAATAAAGTGGCGCCGCTTGTTTTGCTCCCCAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CB642483 [AATACTTTATCCTGTTGCTGATGCGACAACCTTCTTTACTGACTTGCATTATATGCTCCGTGTGATTTCTGCTGGAAACACAAGAACCGTGTGCCATAACCGGTTAAATCTTTTAGAGCATAAATTCAAATTTCATTTGATGTTAAACGCGGATAGGGAGTTTCTTGCCCAGAAGACTGCACCACATCGTGATTTTTACAATGTCAGGAAGGTTGATACTCATGTACACCACTCAGCGTGCATGAATCAAAAACACTTGCTGAGATTTATAAAATCCAAACTAAGGAAAGAACCTGATGAGGTTGTCATTTTCAGAGACGGCACTTATATGACTCTGAAGGAGGTTTTTGAGAGCTTGGACTTAACTGGGTATGACTTGAATGTTGATTTACTAGATGTCCATGCGGACAAAAGTACATTTCATCGTTTTGACAAATTCAACCTTAAGTACAATCCGTGTGGCCAAAGTAGGCTCAGAGAGATTTTCCTCAAACAGGACAATCTTATCCAAGGTCGTTTTCTTGCCGAGCTAACAAAGCAAGTTTTCTCCGACCTTACAGCAAGTAAATACCAGATGGCTGAATATAGGATTTCAATCTATGGGAGGAAGCAAAGTGAATGGGACAACCTTGCAAGCTGGATAGTGAACAATGAATTGTCCAGTGAAAATGTTGTCTGGCTGGTTCAGATCCCACGCTTATATAATGTGTACAAGGAAATGGGTATTGTTACATCATTCCAAACTCTTCTGGACAACATTTTCCTTCCTCTGTTTGAGGTCACCATTGATCCAGCTTCTCATCCGCAGCTTCA ]
[+] EMBL CB643461 [AATACCTTATAATGTTGCTGATGCGACAACCTTCTTTACTGACTTGCATTATATGCTCCGTGTGATTTCTGCTGGAAACACAAGAACCGTGTGCCATAACCGGTTAAATCTTTTAGAGCATAAATTCAAATTTCATTTGATGTTAAACGCGGATAGGGAGTTTCTTGCCCAGAAGACTGCACCACATCGTGATTTTTACAATGTCAGGAAGGTTGATACTCATGTACACCACTCAGCGTGCATGAATCAAAAACACTTGCTGAGATTTATAAAATCCAAACTAAGGAAAGAACCTGATGAGGTTGTCATTTTCAGAGACGGCACTTATATGACTCTGAAGGAGGTTTTTGAGAGCTTGGACTTAACTGGGTATGACTTGAATGTTGATTTACTAGATGTCCATGCGGACAAAAGTACATTTCATCGTTTTGACAAATTCAACCTTAAGTACAATCCGTGTGGCCAAAGTAGGCTCAGAGAGATTTTCCTCAAACAGGACAATCTTATCCAAGGTCGTTTTCTTGCCGAGCTAACAAAGCAAGTTTTCTCCGACCTTACAGCAAGTAAATACCAGATGGCTGAATATAGGATTTCAATCTATGGGAGGAAGCAAAGTGAATGGGACAACCTTGCAAGCTGGATAGTGAACAATGAATTGTCCAGTGAAAATGTTGTCTGGCTGGTTCAGATCCCACGCTTATATAATGTGTACAAGGAAATGGGTATTGTTACATCATTCCAAACTCTTCTGGACAACATTTTCCTTCCTCTGGTTGAGG ]
[+] EMBL AK058281 [ GATTTACTAGATGCCCATGCGGACAAAAGTACATTTCATCGTTTTGACAAATTCAACCTTAAGTACAATCCGTGTGGCCAAAGTAGGCTCAGAGAGATTTTCCTCAAACAGGACAATCTTATCCAAGGTCGTTTTCTTGCCGAGCTAACAAAGCAAGTTTTCTCCGACCTTACAGCAAGTAAATACCAGATGGCTGAATATAGGATTTCAATCTATGGGAGGAAGCAAAGTGAATGGGACAACCTTGCAAGCTGGATAGTGAACAATGAATTGTCCAGTGAAAATGTTGTCTGGCTGGTTCAGATCCCACGCTTATATAATGTGTACAAGGAAATGGGTATTGTTACATCATTCCAAACCCTTCTGGACAACATTTTCCTTCCTCTGTTTGAGGTCACCATTGATCCAGCTTCTCATCCGCAGCTTCACGTCTTCCTAAAGCAGGTTGTAGGGTTAGATTTGGTTGATGATGAGAGTAAACCTGAAAGGCGTCCAACAAAGCATATGCCTACACCTGAACAATGGACCAATGTCTTCAACCCAGCATTTTCATATTATGCATATTACTGCTATGCTAACTTATACACACTCAATAAGTTGCGTGAATCAAAAGGGATGACCACAATCAAATTCCGTCCACATGCTGGCGAGGCTGGAGACATCGATCACTTGGCAGCAACATTTCTTCTTTGTCACAATATATCGCATGGAATCAACTTAAGGAAATCTCCTGTGCTTCAATATCTATACTATCTTGGCCAGATTGGTCTGGCAATGTCCCCATTAAGCAACAACTCCTTGTTTCTTGATTACCACCGGAATCCTTTCCCAATGTTTTTCCAACGAGGCCTGAATGTTTCCCTGTCAACGGATGATCCATTGCAAATTCACCTGACAAAAGAGCCATTGGTGGAAGAATACAGCATTGCTGCTTCACTCTGGAAGCTCAGTTCTTGTGATTTATGTGAAATAGCTAGAAACTCTGTCTATCAATCAGGGTTTTCACATGCTCTCAAGGCACACTGGATTGGCAAGAACTATTACAAAAGAGGACCTACAGGGAACGATATTCATAAAACTAATGTGCCTCACATCAGGGTTCAGTTTAGGGAC TTGA TTTGGAGAGATGAGATGCGTC TTGTATACCTAAACAATGTCATCTTACCTGACGAGGTGGACCAGTAACATGTACCTGGTGTATATGGCGCGGTTGCCATGGGAGTTACATTTCATGTTTGGTTATTGGAAGTCAGCATGAGAAGTGTTGTGATACACATCGTGTCCGGGTTCCAAGCCGACGAGAGAGAAACTTCAAACCAAGTAGTGCCCCCAAAAAGCACAACCAAAAGTACAACAAGATATACACAATAAAATTGGATCTTACTA GATTA GGAAGGATGAAGCGGCTCAGC TGGGTGCTGGATTTTGGGGTGTAGTGTAGGGGAGGCAGGCAAACAATTGC TTCGG CGTGATTGTAATTGTGCAGCCTCTCGTTTGTGAAGGATGCTATACCAACATTGCATGTACTTTAACTGGTCTTACACAGTTATACTCCTGCGAATAAAGTGGCGCCGCTTGTT ]
[+] EMBL CF324153 [ GAAAATGTTGTCTGGCTGGTTCAGATCCCACGCTTATATAATGTGTACAAGGAAATGGGTATTGTTACATCATTCCAAACTCTTCTGGACAACATTTTCCTTCCTCTGTTTGAGGTCACCATTGATCCAGCTTCTCATCCGCAGCTTCACGTCTTCCTAAAGCAGGTTGTAGGGTTAGATTTGGTTGATGATGAGAGTAAACCTGAAAGGCGTCCAACAAAGCATATGCCTACACCTGAACAATGGACCAATGTCTTCAACCCAGCATTTTCATATTATGCATATTACTGCTATGCTAACTTATACACACTCAATAAGTTGCGTGAATCAAAAGGGATGACCACAATCAAATTCCGTCCACATGCTGGCGAGGCTGGAGACATCGATCACTTGGCAGCAACATTTCTTCTTTGTCACAATATATCGCATGGAATCAACTTAAGGAAATCTCCTGTGCTTCAATATCTATACTATCTTGGCCAGATTGGTCTGGCAATGTCCCCATTAAGCAACAACTCCTTGTTTCTTGATTACCACCGGAATCCTTTCCCAATGTTTTTCCAACGAGGCCTGAATGTTTCCCTGTCAACGGAT ]
[+] EMBL CA767547 [ CACAAT NAATTCCGTCC CATGCTGGCGAGGCTGGAGACATCGATCACTTGGCAGCAACATTTCTTCTTTGTCACAATATATCGCATGGAATCAACTTAAGGAAATCTCCCGTGCTTCAATATCTATACTATCTTGGCCAGATTGGTCTGGCAATGTCCCCATTAAGCAACAACTCCTTGTTTCTTGATTACCACCGGAATCCTTTCCCAATGTTTTTCCAACGAGGCCTGAATGTTTCCCTGTCAACGGATGATCCATTGCAAATTCACCTGACAAAAGAGCCATTGGTGGAAGAATACAGCATTGCTGCTTCACTCTGGAAGCTCAGTTCTTGTGATTTATGTGAAATAGCTAGAAACTCTGTCTATCAATCAGGGTTTTCACATGCTCTCAAGGCACACTGGATTGGCAAGAACTATTACAAAAGAGGACCTACAGGGAACGATATTCATAAAACTAATGTGCCTCACATCAGGGTTCAGTTTAGGGAC TTGA TTTGGAGAGATGAGATGCGTC TTGTATACCTAAACAATGTCATCTTACCTGACGAGGTGGACCAGTAACATGTACCTGGTGTATATGGCGCGGTTGCCATGGGAGTTACATTTCATGTTTGGTTATTGGAAGTCAGCATGAGAAGTGTTGTGATACACATCGTGTCCGGGTTNCAAGCCGACGAGAGAGAAACTTCAAACCAAGTAGTGNCCCCCAAAAGCNCAACCAAAAGTCCANCAAGATNTACNCAATAAAATTGGATCTTACTA GATTA GGAAGGATGAAGCGG ]
[-] EMBL CB642484 [ AATGTTTTTCCAACGAGGCCTGAATGTTTCCCTGTCAACGGATGATCCATTGCAAATTCACCTGACAAAAGAGCCATTGGTGGAAGAATACAGCATTGCTGCTTCACTCTGGAAGCTCAGTTCTTGTGATTTATGTGAAATAGCTAGAAACTCTGTCTATCAATCAGGGTTTTCACATGCTCTCAAGGCACACTGGATTGGCAAGAACTATTACAAAAGAGGACCTACAGGGAACGATATTCATAAAACTAATGTGCCTCACATCAGGGTTCAGTTTAGGGAC TTGA TTTGGAGAGATGAGATGCGTC TTGTATACCTAAACAATGTCATCTTACCTGACGAGGTGGACCAGTAACATGTACCTGGTGTATATGGCGCGGTTGCCATGGGAGTTACATTTCATGTTTGGTTATTGGAAGTCAGCATGAGAAGTGTTGTGATACACATCGTGTCCGGGTTCCAAGCCGACGAGAGAGAAACTTCAAACCAAGTAGTGCCCCCAAAAAGCACAACCAAAAGTACAACAAGATATACACAATAAAATTGGATCTTACTA GATTA GGAAGGATGAAGCGGCTCAGC TGGGTGCTGGATTTTGGGGTGTAGTGTAGGGGAGGCAGGCAAACAATTGC TTCGG CGTGATTGTAATTGTGCAGCCTCTCGTTTGTGAAGGATGCTATACCAACATTGCATGTACTTTAACTGGTCTTACACAGTTATACTCCTGGGAATAAAGTGGCGCCGCTT ]
[-] EMBL CB643462 [ CAAATTCACCTGACAAAAGAGCCATTGGTGGAAGAATACAGCATTGCTGCTTCACTCTGGAAGCTCAGTTCTTGTGATTTATGTGAAATAGCTAGAAACTCTGTCTATCAATCAGGGTTTTCACATGCTCTCAAGGCACACTGGATTGGCAAGAACTATTACAAAAGAGGACCTACAGGGAACGATATTCATAAAACTAATGTGCCTCACATCAGGGTTCAGTTTAGGGAC TTGA TTTGGAGAGATGAGATGCGTC TTGTATACCTAAACAATGTCATCTTACCTGACGAGGTGGACCAGTAACATGTACCTGGTGTATATGGCGCGGTTGCCATGGGAGTTACATTTCATGTTTGGTTATTGGAAGTCAGCATGAGAAGTGTTGTGATACACATCGTGTCCGGGTTCCAAGCCGACGAGAGAGAAACTTCAAACCAAGTAGTGCCCCCAAAAAGCACAACCAAAAGTACAACAAGATATACACAATAAAATTGGATCTTACTA GATTA GGAAGGATGAAGCGGCTCAGC TGGGTGCTGGATTTTGGGGTGTAGTGTAGGGGAGGCAGGCAAACAATTGC TTCGG CGTGATTGTAATTGTGCAGCCTCTCGTTTGTGAAGGATGCTATACCAACATTGCATGTACTTTAACTGGTCTTACACAGTTATCCTCCa ]
[-] EMBL CB671813 [ CAAAAGAGCCATTGGTGGAAGAATACAGCATTGCTGCTTCACTCTGGAAGGTCAGTTCTTGTGATTTATGTGAAATAGCTAGAAACTCTGTCTATCAATCAGGGTTTTCACATGCTCTCAAGGCACACTGGATTGGCAAGAACTATTACAAAAGAGGACCTACAGGGAACGATATTCATAAAACTAATGTGCCTCACATCAGGGTTCAGTTTAGGGAC TTGA TTTGGAGAGATGAGATGCGTC TTGTATACCTAAACAATGTCATCTTACCTGACGAGGTGGACCAGTAACATGTACCTGGTGTATATGGCGCGGTTGCCATGGGAGTTACATTTCATGTTTGGTTATTGGAAGTCAGCATGAGAAGTGTTGTGATACACATCGTGTCCGGGTTCCAAGCCGACGAGAGAGAAACTTCAAACCAAGTAGTGCCCCCAAAAAGCACAACCAAAAGTACAACAAGATATACACAATAAAATTGGATCTTACTA GATTA GGAAGGATGAAGCGGCTCAGC TGGGTGCTGGATTTTGGGGTGTAGTGTAGGGGAGGCAGGCAAACAATTGC TTCGG CGTGATTGTAATTGTGCAGCCTCTCGTTTGTGAAGGATGCTATACCAACATTGCATGTACTTTAACTGGTCTTACACAGTTATACTCCTGCGAATAAAGTGGCagggc ]
[-] EMBL CB655846 [ ATTTCAAAAGAGGGCCTACAGGGATCGATATTCATAAACCTAATGTGCCTCACATCAGGGTTCAGTTTAGGGAC TTGA TTTGGAGAGATGAGATGCGTC TTGTATACCTAAACAATGTCATCTTACCTGACGAGGTGGGCCAGTAACATGTACCTGGTGTATATGGCGCGGTTGCCATGGGAGTTACATTTCATGTTCGGTTATGGGAAGTCAGCATGTGAAGTGTTGTGATACACATCGTGTCCGGGTTCCAAGCCGACGAGAGAGAAACTTCAAACCAAGTAGTGCCCCCAAAAAGCACAACCAAAAGTACAACAAGATATTCTCAATAAAATTGGATCTTACTA GATTA GGAAGGATGAAGCGGCTCAGC TGGGTGCTGGATTTTGGGGTGTAGTGTAGGGGAGGCAGGCAAACAATTGC TTCGG CGTGATTGTAATTGTGCAGCCTCTCGTTTGTGAAGGATGCTATACCAACATTGCATGTACTTTAACTGGTCTTACACAGTTATACTCCT ]
[+] EMBL AU093269 [ TACAAAAGAGGACCTACAGGGAACGATATTCATAAAACTAATGTGCCTCACATCAGGGTTCAGTTTAGGGAC TTGA TTTGGAGAGATGAGATGCGTC TTGTATACCTAAACAATGTCATCTTACCTGACGAGGTGGACCAGTAACATGTACCTGGTGTATATGGCGCGGTTGCCATGGGAGTTACATTTCATGTTTGGTTATTGGAAGTCAGCATGAGAAGTGTTGTGATACACATCGTGTCCGGGTTCCAAGCCGACGAGAGAGAAACTTCAAACCAAGTAGTGCCCCCAAAAAGCACAACCAAAAGTACAACAAGATATACACAATAAAATTGGNTCTTACTAGGATTAGGGAGGGATGAAGCGGCTCAGCTTGGGTNCTGGATTTTGGGGGTTAGTTTAGGGGANGCAGGC AACAATTGCTTTCGGCCGTGATTta ]
[+] EMBL BI808754 [ CAGGGTTCA TTTAGGGACTTTGATTTTGGAGAGATGAGATGCGTCTTTGTATACCTAAACAATGTCATCTTACCTGACGAGGTGGACCAGTAACATGTACCTGGTGTATATGGCGCGGTTCCCATGGGAGTTACATTTCATGTTTGGTTATTGGAAGTCAGCATGAGAAGTGTTGTGATACACATCGTGTCCGGGTTCCAAGCCGACGAGAGAGAAACTTCAAACCAAGTAGTGCCCCCCAAAAGCAC ACC AAAGTACACCAAGATATACCCCATAAAATTGGATCTTACTA GATTA GGAAGGATGAAGCGGCTCAGC TGGGTGCTGGATTTTGGGGTGTAGTGTAGGGGAGCCAGCCAAACAATTGC TTCGG CGTGATTGTAATTGTGCAGCCTCTCGTTTGTGAAGGATGCTATACCAAC TTGCATGTACTTTAACTGGTCTTACCCAGTTATACTCCTGAGAATGAAGTGGCCCCGCTTGTTTTGCTCCCCCAAAAAAAAAA ]
[+] EMBL AU070672 [ TTTGGAGAGATGAGATGCGTC TTGTATACCTAAACAATGTCATCTTACCTGACGAGGTGGACCAGTAACATGTACCTGGTGTATATGGCGCGGTTGCCATGGGAGTTACATTTCATGTTTGGTTATTGGAAGTCAGCATGAGAAGTGTTGTGATACACATCGTGTCCGGGTTCCAAGCCGACGAGAGAGAAACTTCAAACCAAGTAGTGCCCCCAAAAAGCACAACCAAAAGTACAACAAGATATACACAATAAAATTGGATCTTACTA GATTA GGAAGGATGAAGCGGCTCAGC TGGGTGCTGGATTTTGGGGTGTAGTGTAGGGGAGGCAGGCAAACAATTGC TTCGG CGTGATTGTAATTGTGCAGCCTCTCGTTTGTGAAGGATGCTATACCAACATTGCATGTACTTTAACTGGTCTTACACAGTTATACTCCTGCGAATAAAGTGGCGCCGCTTGTTTTGCaaaaaa ]
[+] EMBL C97162 [ ACCTGGTGTATATGGCNCGGTT CCCTGGGAGTTACATTNCATGTTTGGTTATTGGAAGTCACCATGAGAAGTGTTGTGATACACATCGTGTCCGGNTTCCAAGCCGACGAGAGAG AACTTCAAACCAAGTAGTGCCCCCAAAAAGCACAACCAAAAGTACAACAAGATATACACAATAAAATTGGATCTTACTA GATTA GGAAGGATGAAGCGGCTCAGC TGGGTGCTGGATTTTGGGGTGTAGTGTAGGGGAGGCAGGCAAACAATTGC TTCGG CGTGATTGTAATTGTGCAGCCTCTCGTTTGTGAAGGATGCTATACCAACATTGCATGTACTTTAACTGGTCTTACACAGTTATACTCCTGCGAATAAAGTGGCGCCGCTTGTTTTGCTCCCCAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL BE040523 [ GTTACATTTCATGTTTGGTTATTGGAAGTCAGCATGAGAAGTGTTGTGATACACATCGTGTCCGGGTTCCAAGCCGACGAGAGAGAAACTTCAAACCAAGTAGTGCCCCCAAAAAGCACAACCAAAAGTACAACAAGATATACACAATAAAATTGGATCTTACTA GATTA GGAAGGATGAAGCGGCTCAGC TGGGTGCTGGATTTTGGGGTGTAGTGTAGGGGAGGCAGGCAAACAATTGC TTCGG CGTGATTGTAATTGTGCAGCCTCTCGTTTGTGAAGGATGCTATACCAACATTGCATGTACTTTAACTGGTCTTACACAGTTATACTCCTGAGAATAAAGTGGCGCCGCTTGTTTTGCTCCCCAGAAAAAAAAAAAAAAAAAA ]
consensusID : consensus_14682#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 738 fasta sequence
[AGAGACCGTTATCTTTTTAGAGAAGAGGTTGCTCCATGGGAGAAGGAGGTCATAAATGATCCCTGTACTCCAAAACCTGACCCCAATCCGTTCACCTATGTGCCTGAACCAAAATCAGAGCATGTTTTCCAAATGGTCGATGGTGTTGTCCATGTCTATGCAGATAAAGACTATACGGAAATACTTTATCCTGTTGCTGATGCGACAACCTTCTTTACTGACTTGCATTATATGCTCCGTGTGATTTCTGCTGGAAACACAAGAACCGTGTGCCATAACCGGTTAAATCTTTTAGAGCATGGAGTTTCTTGCCCAGAAGACTGCACCACATCGTGATTTTTACAATGTCAGGAAGGTTGATACTCATGTACACCACTCAGCGTGCATGAATCAAAAACACTTGCTGAGATTTATAAAATCCAAACTAAGGAAAGAACCTGATGAGGTTGTCATTTTCAGAGACGGCACTTATATGACTCTGAAGGAGGTTTTTGAGAGCTTGGACTTAACTGGGTATGACTTGAATGTTGATTTACTAGATGTCCATGCGGACAAAAGTACATTTCATCGTTTTGACAAATTCAACCTTAAGTACAATCCGTGTGGCCAAAGTAGGCTCAGAGAGATTTTCCTCAAACAGGACAATCTTATCCAAGGTCGTTTTCTTGCCGAGCTAACAAAGCAAGTTTTCTCCGACCTTACAGCAAGTAAATACCAGATGGCTGAATATAGGATTTC]
[+] EMBL CB671812 [AGAGACCGTTATCTTTTTAGAGAAGAGGTTGCTCCATGGGAGAAGGAGGTCATAAATGATCCCTGTACTCCAAAACCTGACCCCAATCCGTTCACCTATGTGCCTGAACCAAAATCAGAGCATGTTTTCCAAATGGTCGATGGTGTTGTCCATGTCTATGCAGATAAAGACTATACGGAAATACTTTATCCTGTTGCTGATGCGACAACCTTCTTTACTGACTTGCATTATATGCTCCGTGTGATTTCTGCTGGAAACACAAGAACCGTGTGCCATAACCGGTTAAATCTTTTAGAGCATGGAGTTTCTTGCCCAGAAGACTGCACCACATCGTGATTTTTACAATGTCAGGAAGGTTGATACTCATGTACACCACTCAGCGTGCATGAATCAAAAACACTTGCTGAGATTTATAAAATCCAAACTAAGGAAAGAACCTGATGAGGTTGTCATTTTCAGAGACGGCACTTATATGACTCTGAAGGAGGTTTTTGAGAGCTTGGACTTAACTGGGTATGACTTGAATGTTGATTTACTAGATGTCCATGCGGACAAAAGTACATTTCATCGTTTTGACAAATTCAACCTTAAGTACAATCCGTGTGGCCAAAGTAGGCTCAGAGAGATTTTCCTCAAACAGGACAATCTTATCCAAGGTCGTTTTCTTGCCGAGCTAACAAAGCAAGTTTTCTCCGACCTTACAGCAAGTAAATACCAGATGGCTGAATATAGGATTTC]
consensusID : consensus_14682#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 594 fasta sequence
[GGATTNGGGAAAANAGAATTTTTTATNGGGTTAAATTTNAAGGNAAAGGGGGCGGGAATTAANNAGNGGGGNCNNNGGGGNGGTTTTTTAAAAATAANGCCCNAAAAAACCGGGTNAATTAGGGGATTAATTGGGNNANANGNNNNGTTTTTTTAAAACTAAAAAAATTTTTTTNAACCGGGGGGGGGGGACCAGTAAANAANTAACTNGGGTATATGGGGCGGTTGCCAGGGGAGTAACATTTAATGTTGGGTTATTGGGAAGTCAGCATGAGAGTGTTGTGAAACACATCGTGTCCGGGTTCCAAGCGGACGAGAGAGAAACTTCAAACCAAGTAGTGCCCCCAAAAAGCACAACCAAAAGTACAACAAGATATACACAATAAAATTGGATCTTACTAGATTAGGAAGGATGAAGCGGCTCAGCTGGGTGCTGGATTTTGGGGTGTAGTGTAGGGGAGGCAGGCAAACAATTGCTTCGGCGTGATTGTAATTGTGCAGCCTCTCGTTTGTGAAGGATGCTATACCAACATTGCATGTACTTTAACTGGTCTTACACAGTTATACTCCTGCGAATAAAGTGGCGCCGCTTGTT]
[-] EMBL BE229045 [GGATTNGGGAAAANAGAATTTTTTATNGGGTTAAATTTNAAGGNAAAGGGGGCGGGAATTAANNAGNGGGGNCNNNGGGGNGGTTTTTTAAAAATAANGCCCNAAAAAACCGGGTNAATTAGGGGATTAATTGGGNNANANGNNNNGTTTTTTTAAAACTAAAAAAATTTTTTTNAACCGGGGGGGGGGGACCAGTAAANAANTAACTNGGGTATATGGGGCGGTTGCCAGGGGAGTAACATTTAATGTTGGGTTATTGGGAAGTCAGCATGAGAGTGTTGTGAAACACATCGTGTCCGGGTTCCAAGCGGACGAGAGAGAAACTTCAAACCAAGTAGTGCCCCCAAAAAGCACAACCAAAAGTACAACAAGATATACACAATAAAATTGGATCTTACTAGATTAGGAAGGATGAAGCGGCTCAGCTGGGTGCTGGATTTTGGGGTGTAGTGTAGGGGAGGCAGGCAAACAATTGCTTCGGCGTGATTGTAATTGTGCAGCCTCTCGTTTGTGAAGGATGCTATACCAACATTGCATGTACTTTAACTGGTCTTACACAGTTATACTCCTGCGAATAAAGTGGCGCCGCTTGTT]
consensusID : consensus_14682#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 495 fasta sequence
[TAAAGCAGGTTGTAGGGTTAGATTTGGTTGATGATGAGAGTAAACCTGAAAGGCGTCCAACAAAGCATATGCCTACACCTGAACAATGGACCAATGTCTTCAACCCAGCATTTTCATATTATGCATATTACTGCTATGCTAACTTATACACACTCAATAAGTTGCGTGAATCNNAAGGGATGACCACAATCAAATTCCGTCCACATGCTGGCGAGGCTGGAGACATCGATCACTTGGCAGCAACATTTCTTCTTTGTCACAATATATCGCATGGAAATCAACTTAAGGGAAATCTCCTGTGGCTTCAATATCCATTACTAATCTTTGGCCCAGAATTGGGTCTGGCAATGTTCCCCATTAAAGCCAACAAACTCCTTGTTTTCTTTGAATTAACCACCCGGGAAATCCCTCTTCCCCAATTGTTTTTTTCCCAACCAAGGCCTGAAATGTTTCCCCTTGTTCCACCGGGATGGATCCCATTTGCCCAATTCCCCC]
[+] EMBL AF093476 [TAAAGCAGGTTGTAGGGTTAGATTTGGTTGATGATGAGAGTAAACCTGAAAGGCGTCCAACAAAGCATATGCCTACACCTGAACAATGGACCAATGTCTTCAACCCAGCATTTTCATATTATGCATATTACTGCTATGCTAACTTATACACACTCAATAAGTTGCGTGAATCNNAAGGGATGACCACAATCAAATTCCGTCCACATGCTGGCGAGGCTGGAGACATCGATCACTTGGCAGCAACATTTCTTCTTTGTCACAATATATCGCATGGAAATCAACTTAAGGGAAATCTCCTGTGGCTTCAATATCCATTACTAATCTTTGGCCCAGAATTGGGTCTGGCAATGTTCCCCATTAAAGCCAACAAACTCCTTGTTTTCTTTGAATTAACCACCCGGGAAATCCCTCTTCCCCAATTGTTTTTTTCCCAACCAAGGCCTGAAATGTTTCCCCTTGTTCCACCGGGATGGATCCCATTTGCCCAATTCCCCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14682#0 AATACTTTATCCTGTTGCTGATGCGACAACCTTCTTTACTGACTTGCATTATATGCTCCG 60
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 TGTGATTTCTGCTGGAAACACAAGAACCGTGTGCCATAACCGGTTAAATCTTTTAGAGCA 120
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 TAAATTCAAATTTCATTTGATGTTAAACGCGGATAGGGAGTTTCTTGCCCAGAAGACTGC 180
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 ACCACATCGTGATTTTTACAATGTCAGGAAGGTTGATACTCATGTACACCACTCAGCGTG 240
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 CATGAATCAAAAACACTTGCTGAGATTTATAAAATCCAAACTAAGGAAAGAACCTGATGA 300
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 GGTTGTCATTTTCAGAGACGGCACTTATATGACTCTGAAGGAGGTTTTTGAGAGCTTGGA 360
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 CTTAACTGGGTATGACTTGAATGTTGATTTACTAGATGTCCATGCGGACAAAAGTACATT 420
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 TCATCGTTTTGACAAATTCAACCTTAAGTACAATCCGTGTGGCCAAAGTAGGCTCAGAGA 480
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 GATTTTCCTCAAACAGGACAATCTTATCCAAGGTCGTTTTCTTGCCGAGCTAACAAAGCA 540
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 AGTTTTCTCCGACCTTACAGCAAGTAAATACCAGATGGCTGAATATAGGATTTCAATCTA 600
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 TGGGAGGAAGCAAAGTGAATGGGACAACCTTGCAAGCTGGATAGTGAACAATGAATTGTC 660
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 CAGTGAAAATGTTGTCTGGCTGGTTCAGATCCCACGCTTATATAATGTGTACAAGGAAAT 720
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 GGGTATTGTTACATCATTCCAAACTCTTCTGGACAACATTTTCCTTCCTCTGTTTGAGGT 780
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ----------AGAGACCGTTATCTTTTTAGAGAAGAGGTTGCTCCATGGGAGAAGGAGGT 50
consensus_14682#0 CACCATTGATCCAGCTTCTCATCCGCAGCTTCACGTCTTCCTAAAGCAGGTTGTAGGGTT 840
consensus_14682#3 -----------------------------------------TAAAGCAGGTTGTAGGGTT 19
consensus_14682#2 ----------------------------GGATTNGGGAAAANAGAATTTTTTATNGGGTT 32
consensus_14682#1 CATAAATGATCCCTGTACTCCAAAACCTGACCCCAATCCGTTCACCTATGTGCCTGAACC 110
* *
consensus_14682#0 AGATTTGGTTGA---------------TGATGAGAGTAAACCTGAAAGGCGTCCAACAAA 885
consensus_14682#3 AGATTTGGTTGA---------------TGATGAGAGTAAACCTGAAAGGCGTCCAACAAA 64
consensus_14682#2 AAATTTNAAGGNAAAGGGGGCGGGAATTAANNAGNGGGGNCNNNGGGGNGGTTTTTTAAA 92
consensus_14682#1 AAAATCAGAGCATGTTTTCCAAATGGTCGATG-GTGTTGTCCATGTCTATG-CAGATAAA 168
* * * * * * * * ***
consensus_14682#0 GCATATGCCTACA----CCTGAACAAT----GGACCAAT---GTCTTCAACCCAGCATTT 934
consensus_14682#3 GCATATGCCTACA----CCTGAACAAT----GGACCAAT---GTCTTCAACCCAGCATTT 113
consensus_14682#2 AATAANGCCCNAAAAAACCGGGTNAATTAGGGGATTAATTGGGNNANANGNNNNGTTTTT 152
consensus_14682#1 GACTATACGGAAATAC-TTTATCCTGTTGCTGATGCGACAACCTTCTTTACTGACTTGCA 227
* * * * * *
consensus_14682#0 TCATA--TTATGCAT-ATTACTGCT----ATGCTAA---CTTATACA--CACTCAATAAG 982
consensus_14682#3 TCATA--TTATGCAT-ATTACTGCT----ATGCTAA---CTTATACA--CACTCAATAAG 161
consensus_14682#2 TTAAAA-CTAAAAAA-ATTTTTTTN----AACCGGG---GGGGGGGGACCAGTAAANAAN 203
consensus_14682#1 TTATATGCTCCGTGTGATTTCTGCTGGAAACACAAGAACCGTGTGCCATAACCGGTTAAA 287
* * * * *** * * * * **
consensus_14682#0 TTGCGTGAATCAAAAGGGATGACCACAATCAAATTCCGTC------CACATGCTGGCGAG 1036
consensus_14682#3 TTGCGTGAATCNNAAGGGATGACCACAATCAAATTCCGTC------CACATGCTGGCGAG 215
consensus_14682#2 TAACTNGGGTATATGGGGCGGTTGCCAGGGGAGTAACATT------TA-ATGTTGGGTTA 256
consensus_14682#1 TCTTTTAGAGCATGGAGTTTCTTGCCCAGAAGACTGCACCACATCGTGATTTTTACAATG 347
* * * * * *
consensus_14682#0 GCTGGAGA----CATCGATCACTTGGCAGCAAC--ATTTCTTCTTTGTCACAATATATCG 1090
consensus_14682#3 GCTGGAGA----CATCGATCACTTGGCAGCAAC--ATTTCTTCTTTGTCACAATATATCG 269
consensus_14682#2 TTGGGAAGTCAGCATGAGAGTGTTGTGAAACAC--ATCGTGTCCGGGTTCCAAGCGGACG 314
consensus_14682#1 TCAGGAAG----GTTGATACTCATGTACACCACTCAGCGTGCATGAATCAAAAACACTTG 403
*** * ** ** * * ** *
consensus_14682#0 CATGGA-----A----TCAACTTAAGG-AAATCTCCTGTG----CTTCAAT---ATCTAT 1133
consensus_14682#3 CATGGA-----AA---TCAACTTAAGGGAAATCTCCTGTGG---CTTCAAT---ATCCAT 315
consensus_14682#2 AGAGAG-----AAACTTCAAACCAAGTAGTGCCCCCAAAAA---GCACAACCAAAAGTAC 366
consensus_14682#1 CTGAGATTTATAAAATCCAAACTAAGGAAAGAACCTGATGAGGTTGTCATTTTCAGAGAC 463
* *** *** * ** * *
consensus_14682#0 -ACTA--TCTTGGCC----AGATTGGTCTGGCAATGT-CCCCAT--TAAG--CAACAA-C 1180
consensus_14682#3 TACTAATCTTTGGCCC-AGAATTGGGTCTGGCAATGTTCCCCAT--TAAAGCCAACAAAC 372
consensus_14682#2 AACAAGATATACACAATAAAATTGGATCTTACTAGATTAGGAAGGATGAAGCGGCTCAGC 426
consensus_14682#1 GGCACTTATATGACTCTGAAGGAGGTTTTTGAGAGCTTGGACTTAACTGG--GTATGACT 521
* * * * * * * * *
consensus_14682#0 TCCTTGTTT--CTT---GATTA-CCACCGGAATCCTTTCCCAATGTTTTTCCAACGAGGC 1234
consensus_14682#3 TCCTTGTTT--TCTTTGAATTAACCACCCGGGAAATCCCTC-----TTCCCCAAT----- 420
consensus_14682#2 TGGGTGCTGGATTTTGGGGTGTAGTGTAGGGGAGGCAGGCAAACAATTGCTTCGGCGTGA 486
consensus_14682#1 TGAATGTTGATTTACTAGATGTCCATGCGGACAAAAGTACATTTCATCGTTTTGACAAAT 581
* ** * * * *
consensus_14682#0 CTGAATGTTTCCCTGTCAACGGATG----ATCCATT-GCAAATTCACCTGACAAAAGAGC 1289
consensus_14682#3 -TGTTTTTTTCCCAACCAAGGCCTG----AAATGTT-TCCCCTTGTTCCACCGGGATGGA 474
consensus_14682#2 TTGTAATTGTGCAGCCTCTCGTTTGTGAAGGATGCTATACCAACATTGCATGTACTTTAA 546
consensus_14682#1 TCAACCTTAAGTACAATCCGTGTGGCCAAAGTAGGCTCAGAGAGATTTTCCTCAAACAGG 641
* *
consensus_14682#0 CATTGGTGGAAGAA--TACAGCATTGCTGCTTCACTCTGGAAGCTCAGTTCTTGTGATTT 1347
consensus_14682#3 TCCCATTTGCCCAA--TTCCCCC------------------------------------- 495
consensus_14682#2 CTGGTCTTACACAG--TTATACTCCTGCGAATAAAGTGGCGCCGCTTGTT---------- 594
consensus_14682#1 ACAATCTTATCCAAGGTCGTTTTCTTGCCGAGCTAACAAAGCAAGTTTTCTCCGACCTTA 701
* * *
consensus_14682#0 ATGTGAAATAGCTAGAAACTCTGTCTATCAATCAGGGTTTTCACATGCTCTCAAGGCACA 1407
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 CAGCAAGTAAATACCAGATGGCTGAATATAGGATTTC----------------------- 738
consensus_14682#0 CTGGATTGGCAAGAACTATTACAAAAGAGGACCTACAGGGAACGATATTCATAAAACTAA 1467
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 TGTGCCTCACATCAGGGTTCAGTTTAGGGACTTGATTTGGAGAGATGAGATGCGTCTTGT 1527
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 ATACCTAAACAATGTCATCTTACCTGACGAGGTGGACCAGTAACATGTACCTGGTGTATA 1587
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 TGGCGCGGTTGCCATGGGAGTTACATTTCATGTTTGGTTATTGGAAGTCAGCATGAGAAG 1647
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 TGTTGTGATACACATCGTGTCCGGGTTCCAAGCCGACGAGAGAGAAACTTCAAACCAAGT 1707
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 AGTGCCCCCAAAAAGCACAACCAAAAGTACAACAAGATATACACAATAAAATTGGATCTT 1767
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 ACTAGATTAGGAAGGATGAAGCGGCTCAGCTGGGTGCTGGATTTTGGGGTGTAGTGTAGG 1827
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 GGAGGCAGGCAAACAATTGCTTCGGCGTGATTGTAATTGTGCAGCCTCTCGTTTGTGAAG 1887
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 GATGCTATACCAACATTGCATGTACTTTAACTGGTCTTACACAGTTATACTCCTGCGAAT 1947
consensus_14682#3 ------------------------------------------------------------
consensus_14682#2 ------------------------------------------------------------
consensus_14682#1 ------------------------------------------------------------
consensus_14682#0 AAAGTGGCGCCGCTTGTTTTGCTCCCCAAAAAAAAAAAAAAAAAAAAAA 1996
consensus_14682#3 -------------------------------------------------
consensus_14682#2 -------------------------------------------------
consensus_14682#1 -------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||