cluster # 14686

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Oryza sativa
cluster # 14686 cluster # 14686 Sequences # 17 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14686#0 length = 736 sequences # 3
consensus_14686#1 length = 708 sequences # 12

consensus_14686#2 length = 589 sequences # 1
consensus_14686#3 length = 360 sequences # 1

consensusID : consensus_14686#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 736
fasta sequence

                              [TCTTTTTAAGTTTTTTTAAAACAGACCTGTCCTTTTCTTGTCCTTTTTTTTTTAATAGAACAAGCAATAGGTGGTATTTATCTTATCTTCTTTCCCACCCTTTCTGCTGTCAATGTTCATAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCATTTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGGCAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTGAAACAAAACTCACAAAAGGTTGCACCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTCTGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC]

[+] EMBL CB674248             [TCTTTTTAAGTTTTTTTAAAACAGACCTGTCCTTTTCTTGTCCTTTTTTTTTTAATAGAACAAGCAATAGGTGGTATTTATCTTATCTTCTTTCCCACCCTTTCTGCTGTCAATGTTCATAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCATTTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGGCAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTGAAACAAAACTCACAAAAGGTTGCACCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTCTGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATC                                             ]
[-] EMBL AU174715             [ttTTTTTTTTTTTTTTTAAAACAGACCTGNCCTTTTCTTGTTCTTTTTTTTTTAATAGAACAAGCAATAGGGGGTATTTATCTTATCTTCTTTCCCACCCTTTCTGCTGTCAANGTTCATAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGNGATGCTTCGGNAAGGATCTTGCTCTCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB665728             [                                                              AGCAATAGGTGGTATTTATCTTATCTTCTTTCCCACCCTTTCTGCTGTCAATGTTCATAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCATTTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGGCAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTGAAACAAAACTCACAAAAGGTTGCACCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTCTGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC]




>consensus_14686#0
TCTTTTTAAGTTTTTTTAAAACAGACCTGTCCTTTTCTTGTCCTTTTTTTTTTAATAGAA
CAAGCAATAGGTGGTATTTATCTTATCTTCTTTCCCACCCTTTCTGCTGTCAATGTTCAT
AAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGG
ATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAA
GGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATG
TCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCATT
TCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGGC
AAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTGAAACAAAACTCACAA
AAGGTTGCACCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTCTGATAT
AAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTA
CACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTT
GATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCAC
CAGGATAGAGGAGAAC

consensusID : consensus_14686#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 708
fasta sequence

                              [TTTTCCCTTTTTTAAAGCAAAACAGACCTGTCCTTTTCTTGTT-CTTT-TTTTTTTAATAGAACAAGCAATAGGTGGTATTTATCTTATCTTCTTTCCCACCCTTTCTGCTGTCAATGTTCATAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCATTTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGGCAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTC-TGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC]

[+] EMBL CB669486             [TTTTCCCTTTTTTAAAGCAAAACAGACCTGTCCTTTTCTTGTT CTTT TTTTTTTAATAGAACAAGCAATAGGTGGTATTTATCTTATCTTCTTTCCCACCCTTTCTGCTGTCAATGTTCATAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCATTTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGGCAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTC TGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCCAATACCACCAGGATAGAGGAGAAC]
[+] EMBL CB671087             [             AAAGTAAAACAGACCTGTCCTTTTCTTGTTCCTTT TTTTTTTAATAGAACAAGCAATAGGTGGTATTTATCTTATCTTCTTTCCCACCCTTTCTGCTGTCAATGTTCATAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCATTTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGGCAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTC TGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC]
[+] EMBL CB670296             [                      CAGACCTGTCCTTTTCTTGTT CTTTCTTTTTTTAATAGAACAAGCAATAGGTGGTATTTATCTTATCTTCTTTCCCACCCTTTCTGCTGTCAATGTTCATAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCATTTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGGCAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTC TGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC]
[-] EMBL CA767376             [                                        GTT CTTT TTTTTTTAATAGAACAAGCAATAGGTGGTATTTATCTTATCTTCTTTCCCATCCTTTCTGCTGTCAATGTTCATAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCGCCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCATTTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGGCAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTCATGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACccctt                                                                                  ]
[+] EMBL CB618592             [                                                         ATAGAACAAGCAATAGGTGGTATTTATCTTATCTTCTTTCCCATCCTTTCTGCTGTCAATGTTCATAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCATTTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGGCAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTC TGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC]
[+] EMBL CB618665             [                                                                 AGCAATAGGTGGTATTTATCTTATCTTCTTTCCCATCCTTTCTGCTGTCAATGTTCATAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCACTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGACCATTCCTTTCATTTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAAAACAGCAGGCAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTC TGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC]
[+] EMBL CB672217             [                                                                        GGTGGNATTTATCTTATCTCCTTT CCACCCTTTCTGCTGTCAATGTTCATAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCATTTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGGCAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTC TGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC]
[+] EMBL CB669156             [                                                                                           TCTTTCCCCTCCTTTCTGCTGGCAATGTTCATAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCATTTCAATTGGTTTTCCAAATAAATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGGCAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACT     CTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTC TGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC]
[+] EMBL CB675768             [                                                                                                            GCTGTCAATGTTCATAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCATTTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGGCAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTC TGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC]
[+] EMBL CB664495             [                                                                                                                TCAATGTTCATAAATTAATCTCATTCCCACAAACTACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCATTTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGGCAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTC TGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC]
[+] EMBL CB670256             [                                                                                                                     GTTCATAAATTAATCTCATTCCCTCAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCATTTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGGCAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTC TGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC]
[+] EMBL CB669195             [                                                                                                                                                                                                                                                                                                                                                                TTCCTTTCATTTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGGCAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTC TGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC]




>consensus_14686#1
TTTTCCCTTTTTTAAAGCAAAACAGACCTGTCCTTTTCTTGTTCTTTTTTTTTTAATAGA
ACAAGCAATAGGTGGTATTTATCTTATCTTCTTTCCCACCCTTTCTGCTGTCAATGTTCA
TAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGG
GATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTA
AGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGAT
GTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCAT
TTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGG
CAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTTACTCCTGGACAATC
TTGGTTGAACGACTCTATTGTTTCTCTGATATAAGGGATGTTCTTTAGTTCATTGTAATC
CAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCC
AAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTC
ATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC

consensusID : consensus_14686#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 589
fasta sequence

                              [AGACCTGTCCTTTTCTTGTCCCTTAATATTTAATAGAACAAGCAATAGGTGGTATTTATCTTATCTTCTTTCCCACCCTTTCTGCTGTCAATCTTCATAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTCTGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC]

[+] EMBL CB659778             [AGACCTGTCCTTTTCTTGTCCCTTAATATTTAATAGAACAAGCAATAGGTGGTATTTATCTTATCTTCTTTCCCACCCTTTCTGCTGTCAATCTTCATAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTCTGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC]




>consensus_14686#2
AGACCTGTCCTTTTCTTGTCCCTTAATATTTAATAGAACAAGCAATAGGTGGTATTTATC
TTATCTTCTTTCCCACCCTTTCTGCTGTCAATCTTCATAAATTAATCTCATTCCCACAAA
ATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATG
TTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCT
TCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCAC
TCTCCCTATCCCTCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTTACTCCTGGACAAT
CTTGGTTGAACGACTCTATTGTTTCTCTGATATAAGGGATGTTCTTTAGTTCATTGTAAT
CCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTC
CAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTT
CATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC

consensusID : consensus_14686#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 360
fasta sequence

                              [CGTTCCTGACGTGTCGCTGGAGGTCCCCAATAAATACTATATCCGACATGCCAATTTAGGGACAACTTCAAGCAACTGAAGGACCTGATTTTCGACCTCTGCTTTTACAGTACTCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTCTGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC]

[+] EMBL CB661673             [CGTTCCTGACGTGTCGCTGGAGGTCCCCAATAAATACTATATCCGACATGCCAATTTAGGGACAACTTCAAGCAACTGAAGGACCTGATTTTCGACCTCTGCTTTTACAGTACTCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTCTGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC]




>consensus_14686#3
CGTTCCTGACGTGTCGCTGGAGGTCCCCAATAAATACTATATCCGACATGCCAATTTAGG
GACAACTTCAAGCAACTGAAGGACCTGATTTTCGACCTCTGCTTTTACAGTACTCCTTAC
TCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTCTGATATAAGGGATGTTCTTTAG
TTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTAT
GACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAA
CTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14686#0      -TCTTTTTAAGTTTTTTTAAAACAGACCTGTCCTTTTCTTGTCCTTTTTTTTTTAATAGA 59
consensus_14686#2      -----------------------AGACCTGTCCTTTTCTTGTCCCTTAATATTTAATAGA 37
consensus_14686#1      TTTTCCCTTTTTTAAAGCAAAACAGACCTGTCCTTTTCTTGTTCTTTTTTTTTTAATAGA 60
consensus_14686#3      ------------------------------------------------------------
                                                                                   

consensus_14686#0      ACAAGCAATAGGTGGTATTTATCTTATCTTCTTTCCCACCCTTTCTGCTGTCAATGTTCA 119
consensus_14686#2      ACAAGCAATAGGTGGTATTTATCTTATCTTCTTTCCCACCCTTTCTGCTGTCAATCTTCA 97
consensus_14686#1      ACAAGCAATAGGTGGTATTTATCTTATCTTCTTTCCCACCCTTTCTGCTGTCAATGTTCA 120
consensus_14686#3      ------------------------------------------------------------
                                                                                   

consensus_14686#0      TAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGG 179
consensus_14686#2      TAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGG 157
consensus_14686#1      TAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGG 180
consensus_14686#3      ------------------------------------------------------------
                                                                                   

consensus_14686#0      GATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTA 239
consensus_14686#2      GATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTA 217
consensus_14686#1      GATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTA 240
consensus_14686#3      ------------------------------------------------------------
                                                                                   

consensus_14686#0      AGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGAT 299
consensus_14686#2      AGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGAT 277
consensus_14686#1      AGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGAT 300
consensus_14686#3      -------CGTTCCTGACGTGTCGCTGGA-GGTCCCCAATAAATACTATATCCGAC---AT 49
                               * **        **    **     *   ***    * *  ** ***   **

consensus_14686#0      GTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCAT 359
consensus_14686#2      GTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTG--------------------- 316
consensus_14686#1      GTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCAT 360
consensus_14686#3      GCCAATTTAGGGACAACTT-CAAGCAACTGAAGGACCTG--------------------- 87
                       * * *  **        ** **  *  *  *     ***                     

consensus_14686#0      TTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGG 419
consensus_14686#2      ------------------------------------------------------------
consensus_14686#1      TTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGG 420
consensus_14686#3      ------------------------------------------------------------
                                                                                   

consensus_14686#0      CAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTGAAACAAAACTCACA 479
consensus_14686#2      ---------------ATTTCCTTCCTCTCCTTTTACAGTACTCCT--------------- 346
consensus_14686#1      CAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCT--------------- 465
consensus_14686#3      ---------------ATTTTCGACCTCTGCTTTTACAGTACTCCT--------------- 117
                                      **** *  ***** ****************               

consensus_14686#0      AAAGGTTGCACCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTCTGATA 539
consensus_14686#2      --------------TACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTCTGATA 392
consensus_14686#1      --------------TACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTCTGATA 511
consensus_14686#3      --------------TACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTCTGATA 163
                                     **********************************************

consensus_14686#0      TAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCT 599
consensus_14686#2      TAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCT 452
consensus_14686#1      TAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCT 571
consensus_14686#3      TAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCT 223
                       ************************************************************

consensus_14686#0      ACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGT 659
consensus_14686#2      ACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGT 512
consensus_14686#1      ACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGT 631
consensus_14686#3      ACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGT 283
                       ************************************************************

consensus_14686#0      TGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCA 719
consensus_14686#2      TGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCA 572
consensus_14686#1      TGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCA 691
consensus_14686#3      TGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCA 343
                       ************************************************************

consensus_14686#0      CCAGGATAGAGGAGAAC 736
consensus_14686#2      CCAGGATAGAGGAGAAC 589
consensus_14686#1      CCAGGATAGAGGAGAAC 708
consensus_14686#3      CCAGGATAGAGGAGAAC 360
                       *****************