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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14728#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1423 fasta sequence
[GCTCGTGGCCTCCTCCGCCGTCCACGTGAGGCAGGCAGGGCTAACTCCGCCGCGGGGCCCACGGAGCAGTGGGTGGGTGGGGCCCGCGGCCCGCACCGTCCCTCGGATCGCGCGGGGCCCACCTGGGGGGCAATTCCGTCTCCTTCCTCCCTCTCGCTTACGAACTCCGCTACCAACCGCTTCCTTTTCCTTCTGCTGCTGCTGCTGCTGCTGCTGGTGGTGGTAGACAGCGAAGCCGGCGAACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGT-GG-ACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCAAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC-TTCCTTGCTATTCATATTCCTAG-TTGGAATATTTG-TTTCTTCATGGGTGGGTTCAACTGTCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA-CATATATTCTG-CAT-CGAAGCAAGTTAGCACTGCTG-TTTCACCAGAT-CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT-CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG-CAGTGTATATGTGC-CA-ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG-AATTT-GTCCATTCGAGAAGGGATAGAAAT-CATTGTTTCTGGAGGAATGACCAT-GCCGCAGGTGATTG-CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC---------AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA-AAGCTGGAA-CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCA-AATGTATATCAGTACTGTGACCAATAGTATTTATACTCCTTTCAAAAGAAAAAAAAA-CGATAGCATTTGTACCTTGTTTAAAAAAAA]
[+] EMBL AK121867 [GCTCGTGGCCTCCTCCGCCGTCCACGTGAGGCAGGCAGGGCTAACTCCGCCGCGGGGCCCACGGAGCAGTGGGTGGGTGGGGCCCGCGGCCCGCACCGTCCCTCGGATCGCGCGGGGCCCACCTGGGGGGCAATTCCGTCTCCTTCCTCCCTCTCGCTTACGAACTCCGCTACCAACCGCTTCCTTTTCCTTCTGCTGCTGCTGCTGCTGCTGCTGGTGGTGGTAGACAGCGAAGCCGGCGAACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGT GG ACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCAAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGATAGAAAT CATTGTTTCTGGAGGAATGACCAT GCCGCAGGTGATTG CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCA AATGTATATCAGTACTGTGACCAATAGTATTTATACTCCTTTCAAAAGAAAAAAAAA CGATAGCATTTG ]
[+] EMBL AK059283 [ TTCCTTTTCCTTCTGCTGCTGCTGCTGCTGCTGCTGGTGGTGGTAGACAGCGAAGCCGGCGAACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGT GG ACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCAAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGATAGAAAT CATTGTTTCTGGAGGAATGACCAT GCCGCAGGTGATTG CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATCAGCTTTTGTAGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCA AATGTATATCAGTACTGTGACCAATAGTATTTATACTCCTTTCAAAAGAAAAAAAAA CGATAGCATTTG ]
[+] EMBL CB626900 [ gtcCTGCTGCTGCTGCTGCTGCTGCTGGTGGTGGTAGACAGCGAAGCCGGCGAACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGT GG ACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCAAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTCTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGAC ]
[+] EMBL CB626940 [ TGCTGCTGCTGCTGCTGGTGGCGGTAGACAGCGAAGCCGGCGAACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGT GG ACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCAAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTCTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATT ]
[+] EMBL C97538 [ CGAACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGG GGTNGG ACCCCGANGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCNCCGGCGAACTCCACCCGCAAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTNGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAGTTTGGAATATTTGTTTTCTTCATGGGTGGGNTCAACTGTCTTTGGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTGTTTTCACCAGAT CAAAATACAACGGNATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATT GTGAATATGCATTTGGATTCANAACATCGATGATGATCCTTNAGACTGACAAAGGTGATt ]
[+] EMBL AU183277 [ AACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGT GG ACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCAAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCAT ]
[+] EMBL OSC452 [ gnanACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGA GAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGA C GT GGNACCCCGAGGACCCGGTCAAGTCGCCGCCG GGCCCACCTCGCCGGCGAACTCCACCCGCAA GCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTT ]
[+] EMBL CB653923 [ CTCGGTCCCTTTGGCATCCTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGT GG ACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCAAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATA ]
[+] EMBL CF323560 [ TTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGCNCA ACCAATCATCTATATATCGGTGACATCTTCTTGG ]
[-] EMBL CB626941 [ CCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGG TTTTGACTTTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTCTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGATAGAAAT CATTGTTTCTGGAGGAATGACCAT GCCGCAGGTGATTG CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCA AATGTATATCAGTACTGTGACCAATAGTATTTATACTCCTTTCAAAAGAAAAAAAAATCGATAGCATTTGTACCTTG ]
[-] EMBL CB653924 [ CTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGATAGAAAT CATTGTTTCTGGAGGAATGACCAT GCCGCAGGTGATTG CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATCAGCTTTTGTAGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCA AATGTATATCAGTACAGTGCCCAATAGT TTTAaggtcc ]
[-] EMBL CB626901 [ TTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTCTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGATAGAAAT CATTGTTTCTGGAGGAATGACCAT GCCGCAGGTGATTG CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCA AATGTATATCAGTACTGTGACCAATAGTATTTATACTCCTTTCAAAAGAAAAAAAAATCGATAGCATTTG ]
[+] EMBL CA999153 [ TTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGATAGAAAT CATTGTTTCTGGAGGAATGACCAT GCCGCATGTGATTG CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAcg ]
[+] EMBL C99208 [ GGCACCTTNTATTCTGCCATCCGAAGCANGTTAGCACTGCTG TTTCACCAGATCCAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGTCCATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTGCCAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGATAGAAATCCATTGTTTCTGGAGGAATGACCAT GCCGCAGGTGATTGCCAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCA AATGTATATCAGTACTGTGACCAATAGTATTTATACTCCTTTCAAAA ]
[-] EMBL BU667279 [ ACTGCTG TTTCACCAGAT C AAATAC ACGGCATTTAAAGAAGTTGC ATAATTAGT CATCCCCGTATTGGTGAATATGCATTGGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACC ATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGATAGAAAT CATTGTTTCTGGAGGAATGACCAT GCCGCAGGTGATTG CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAACCAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATC AAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCACAATGTATATCAGTACTGTGACC ATAGTATTTATACTCCTTTCAAAAGAAAAAAAA ]
[+] EMBL C97539 [ GTGTATATGTGC CA ACC ATCATCTATATATCGGTGNCATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGNTAGAAAT CATTGTTTCTGGAGG ATGACCAT GCCGCAGGTGATTG CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATNGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTATCAATCACGCNCCA AATGTATATCAGTACTGTGACCAATAGNATTTATACTCCTNTCAAAAGAAAAAAAAA CGATAGCATTTGTACCTTGTTTAAAAAAA ]
[+] EMBL BI807498 [ ATGTCC CACACCCATCATCTATATATCGGTGACATCTTCTTGGTTAGTTCTGAGGAGATTATAA GCCGAAATTTGGTCCATTCGAGAAGGGATAG AAT CATTGTTTCTGGAGGAATGACCATGGCCGCAGGTGATTG CAGCACCAGGACCAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACACAAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTA GCAGATC AAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCA AATGTATATCAGTACTGTGACC ATAGTATTTATACTCCTTTC AAAGAAAAAAAAATCGATAGCATTTGTACCTTGTTTAAAAAAAA]
consensusID : consensus_14728#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 219 fasta sequence
[ACCAAAGGGGTTGATTGAGAAGCAGCACTTGCTGGTAGATTAGGCAGATCCAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCAATGTATATCAGTACTGTGACCATAGTATTTATACTCCTTTCAAAGAAAAAANAATCGATAGCATTTGTACCTTGTTTAAAAA]
[+] EMBL BM420658 [ACCAAAGGGGTTGATTGAGAAGCAGCACTTGCTGGTAGATTAGGCAGATCCAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCAATGTATATCAGTACTGTGACCATAGTATTTATACTCCTTTCAAAGAAAAAANAATCGATAGCATTTGTACCTTGTTTAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14728#0 GCTCGTGGCCTCCTCCGCCGTCCACGTGAGGCAGGCAGGGCTAACTCCGCCGCGGGGCCC 60
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 ACGGAGCAGTGGGTGGGTGGGGCCCGCGGCCCGCACCGTCCCTCGGATCGCGCGGGGCCC 120
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 ACCTGGGGGGCAATTCCGTCTCCTTCCTCCCTCTCGCTTACGAACTCCGCTACCAACCGC 180
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 TTCCTTTTCCTTCTGCTGCTGCTGCTGCTGCTGCTGGTGGTGGTAGACAGCGAAGCCGGC 240
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 GAACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATC 300
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 TAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCG 360
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 CAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGTGG 420
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 ACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCA 480
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 AGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAG 540
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 TTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATG 600
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 GATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGA 660
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 CTTCCTTGCTATTCATATTCCTAGTTGGAATATTTGTTTCTTCATGGGTGGGTTCAACTG 720
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 TCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCACATATATTCTG 780
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 CATCGAAGCAAGTTAGCACTGCTGTTTCACCAGATCAAAATACAACGGCATTTAAAGAAG 840
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 TTGCAATAATTAGTCATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGA 900
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 TGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTGCAGTGTATATGTGCCAACCAATC 960
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 ATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCGAATTTGT 1020
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 CCATTCGAGAAGGGATAGAAATCATTGTTTCTGGAGGAATGACCATGCCGCAGGTGATTG 1080
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTG 1140
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 CGTGAGTACATCAGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACAAAG 1200
consensus_14728#1 ------------------------------------------------------------
consensus_14728#0 CTGGAACAAGGTGATTGAGAAGCAGCA-TTGCTGGTAGATTAGGCAGATCAAAATACGAA 1259
consensus_14728#1 ACCAAAGGGGTTGATTGAGAAGCAGCACTTGCTGGTAGATTAGGCAGATCCAAATACGAA 60
** * **************** ********************** *********
consensus_14728#0 AGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAAT 1319
consensus_14728#1 AGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAAT 120
************************************************************
consensus_14728#0 CTTTCAATCACGCTCCAAATGTATATCAGTACTGTGACCAATAGTATTTATACTCCTTTC 1379
consensus_14728#1 CTTTCAATCACGCTCCAA-TGTATATCAGTACTGTGACCA-TAGTATTTATACTCCTTTC 178
****************** ********************* *******************
consensus_14728#0 AAAAGAAAAAAAAACGATAGCATTTGTACCTTGTTTAAAAAAAA 1423
consensus_14728#1 AAAGAAAAAANAATCGATAGCATTTGTACCTTGTTTAAAAA--- 219
*** ***** ** ***************************
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||