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Oryza sativa
cluster # 14728 cluster # 14728       Sequences # 18       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14728#0 length = 1423 sequences # 17  
consensus_14728#1 length = 219 sequences # 1  

consensusID : consensus_14728#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 1423
fasta sequence
                              [GCTCGTGGCCTCCTCCGCCGTCCACGTGAGGCAGGCAGGGCTAACTCCGCCGCGGGGCCCACGGAGCAGTGGGTGGGTGGGGCCCGCGGCCCGCACCGTCCCTCGGATCGCGCGGGGCCCACCTGGGGGGCAATTCCGTCTCCTTCCTCCCTCTCGCTTACGAACTCCGCTACCAACCGCTTCCTTTTCCTTCTGCTGCTGCTGCTGCTGCTGCTGGTGGTGGTAGACAGCGAAGCCGGCGAACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGT-GG-ACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCAAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC-TTCCTTGCTATTCATATTCCTAG-TTGGAATATTTG-TTTCTTCATGGGTGGGTTCAACTGTCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA-CATATATTCTG-CAT-CGAAGCAAGTTAGCACTGCTG-TTTCACCAGAT-CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT-CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG-CAGTGTATATGTGC-CA-ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG-AATTT-GTCCATTCGAGAAGGGATAGAAAT-CATTGTTTCTGGAGGAATGACCAT-GCCGCAGGTGATTG-CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC---------AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA-AAGCTGGAA-CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCA-AATGTATATCAGTACTGTGACCAATAGTATTTATACTCCTTTCAAAAGAAAAAAAAA-CGATAGCATTTGTACCTTGTTTAAAAAAAA]

[+] EMBL AK121867             [GCTCGTGGCCTCCTCCGCCGTCCACGTGAGGCAGGCAGGGCTAACTCCGCCGCGGGGCCCACGGAGCAGTGGGTGGGTGGGGCCCGCGGCCCGCACCGTCCCTCGGATCGCGCGGGGCCCACCTGGGGGGCAATTCCGTCTCCTTCCTCCCTCTCGCTTACGAACTCCGCTACCAACCGCTTCCTTTTCCTTCTGCTGCTGCTGCTGCTGCTGCTGGTGGTGGTAGACAGCGAAGCCGGCGAACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGT GG ACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCAAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGATAGAAAT CATTGTTTCTGGAGGAATGACCAT GCCGCAGGTGATTG CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC         AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCA AATGTATATCAGTACTGTGACCAATAGTATTTATACTCCTTTCAAAAGAAAAAAAAA CGATAGCATTTG                  ]
[+] EMBL AK059283             [                                                                                                                                                                                    TTCCTTTTCCTTCTGCTGCTGCTGCTGCTGCTGCTGGTGGTGGTAGACAGCGAAGCCGGCGAACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGT GG ACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCAAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGATAGAAAT CATTGTTTCTGGAGGAATGACCAT GCCGCAGGTGATTG CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATCAGCTTTTGTAGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCA AATGTATATCAGTACTGTGACCAATAGTATTTATACTCCTTTCAAAAGAAAAAAAAA CGATAGCATTTG                  ]
[+] EMBL CB626900             [                                                                                                                                                                                             gtcCTGCTGCTGCTGCTGCTGCTGCTGGTGGTGGTAGACAGCGAAGCCGGCGAACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGT GG ACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCAAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTCTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB626940             [                                                                                                                                                                                                       TGCTGCTGCTGCTGCTGGTGGCGGTAGACAGCGAAGCCGGCGAACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGT GG ACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCAAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTCTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATT                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C97538               [                                                                                                                                                                                                                                               CGAACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGG GGTNGG ACCCCGANGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCNCCGGCGAACTCCACCCGCAAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTNGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAGTTTGGAATATTTGTTTTCTTCATGGGTGGGNTCAACTGTCTTTGGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTGTTTTCACCAGAT CAAAATACAACGGNATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATT GTGAATATGCATTTGGATTCANAACATCGATGATGATCCTTNAGACTGACAAAGGTGATt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU183277             [                                                                                                                                                                                                                                                 AACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGT GG ACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCAAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL OSC452               [                                                                                                                                                                                                                                              gnanACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGA GAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGA  C GT GGNACCCCGAGGACCCGGTCAAGTCGCCGCCG GGCCCACCTCGCCGGCGAACTCCACCCGCAA GCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB653923             [                                                                                                                                                                                                                                                       CTCGGTCCCTTTGGCATCCTCATCCTCCAGGTCCACGGCCACTAGCTACCATCTAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCGCAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGT GG ACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCAAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF323560             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGCNCA ACCAATCATCTATATATCGGTGACATCTTCTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB626941             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGG TTTTGACTTTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTCTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGATAGAAAT CATTGTTTCTGGAGGAATGACCAT GCCGCAGGTGATTG CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC         AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCA AATGTATATCAGTACTGTGACCAATAGTATTTATACTCCTTTCAAAAGAAAAAAAAATCGATAGCATTTGTACCTTG           ]
[-] EMBL CB653924             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGATAGAAAT CATTGTTTCTGGAGGAATGACCAT GCCGCAGGTGATTG CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATCAGCTTTTGTAGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCA AATGTATATCAGTACAGTGCCCAATAGT TTTAaggtcc                                                 ]
[-] EMBL CB626901             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTGGATTTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTCTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGATAGAAAT CATTGTTTCTGGAGGAATGACCAT GCCGCAGGTGATTG CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC         AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCA AATGTATATCAGTACTGTGACCAATAGTATTTATACTCCTTTCAAAAGAAAAAAAAATCGATAGCATTTG                  ]
[+] EMBL CA999153             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTGATATATTTGGCCTTGGGTTTTTGAC TTCCTTGCTATTCATATTCCTAG TTGGAATATTTG TTTCTTCATGGGTGGGTTCAACTGTCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCA CATATATTCTG CAT CGAAGCAAGTTAGCACTGCTG TTTCACCAGAT CAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGT CATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGATAGAAAT CATTGTTTCTGGAGGAATGACCAT GCCGCATGTGATTG CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC         AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAcg                                                                                                                                       ]
[+] EMBL C99208               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGCACCTTNTATTCTGCCATCCGAAGCANGTTAGCACTGCTG TTTCACCAGATCCAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGTCCATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTGCCAGTGTATATGTGC CA ACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGATAGAAATCCATTGTTTCTGGAGGAATGACCAT GCCGCAGGTGATTGCCAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC         AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCA AATGTATATCAGTACTGTGACCAATAGTATTTATACTCCTTTCAAAA                                         ]
[-] EMBL BU667279             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACTGCTG TTTCACCAGAT C AAATAC ACGGCATTTAAAGAAGTTGC ATAATTAGT CATCCCCGTATTGGTGAATATGCATTGGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTG CAGTGTATATGTGC CA ACC ATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGATAGAAAT CATTGTTTCTGGAGGAATGACCAT GCCGCAGGTGATTG CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC         AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAACCAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATC AAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCACAATGTATATCAGTACTGTGACC ATAGTATTTATACTCCTTTCAAAAGAAAAAAAA                                ]
[+] EMBL C97539               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTGTATATGTGC CA ACC ATCATCTATATATCGGTGNCATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCG AATTT GTCCATTCGAGAAGGGNTAGAAAT CATTGTTTCTGGAGG ATGACCAT GCCGCAGGTGATTG CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC         AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACA AAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAAGTCAGTGTTGACTAGTCCGCATNGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTATCAATCACGCNCCA AATGTATATCAGTACTGTGACCAATAGNATTTATACTCCTNTCAAAAGAAAAAAAAA CGATAGCATTTGTACCTTGTTTAAAAAAA ]
[+] EMBL BI807498             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATGTCC CACACCCATCATCTATATATCGGTGACATCTTCTTGGTTAGTTCTGAGGAGATTATAA GCCGAAATTTGGTCCATTCGAGAAGGGATAG AAT CATTGTTTCTGGAGGAATGACCATGGCCGCAGGTGATTG CAGCACCAGGACCAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGAGTACATC         AGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACACAAGCTGGAA CAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTA GCAGATC AAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCA AATGTATATCAGTACTGTGACC ATAGTATTTATACTCCTTTC AAAGAAAAAAAAATCGATAGCATTTGTACCTTGTTTAAAAAAAA]


>consensus_14728#0 GCTCGTGGCCTCCTCCGCCGTCCACGTGAGGCAGGCAGGGCTAACTCCGCCGCGGGGCCC ACGGAGCAGTGGGTGGGTGGGGCCCGCGGCCCGCACCGTCCCTCGGATCGCGCGGGGCCC ACCTGGGGGGCAATTCCGTCTCCTTCCTCCCTCTCGCTTACGAACTCCGCTACCAACCGC TTCCTTTTCCTTCTGCTGCTGCTGCTGCTGCTGCTGGTGGTGGTAGACAGCGAAGCCGGC GAACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATC TAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCG CAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGTGG ACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCA AGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAG TTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATG GATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGA CTTCCTTGCTATTCATATTCCTAGTTGGAATATTTGTTTCTTCATGGGTGGGTTCAACTG TCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCACATATATTCTG CATCGAAGCAAGTTAGCACTGCTGTTTCACCAGATCAAAATACAACGGCATTTAAAGAAG TTGCAATAATTAGTCATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGA TGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTGCAGTGTATATGTGCCAACCAATC ATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCGAATTTGT CCATTCGAGAAGGGATAGAAATCATTGTTTCTGGAGGAATGACCATGCCGCAGGTGATTG CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTG CGTGAGTACATCAGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACAAAG CTGGAACAAGGTGATTGAGAAGCAGCATTGCTGGTAGATTAGGCAGATCAAAATACGAAA GTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATC TTTCAATCACGCTCCAAATGTATATCAGTACTGTGACCAATAGTATTTATACTCCTTTCA AAAGAAAAAAAAACGATAGCATTTGTACCTTGTTTAAAAAAAA



consensusID : consensus_14728#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 219
fasta sequence
                              [ACCAAAGGGGTTGATTGAGAAGCAGCACTTGCTGGTAGATTAGGCAGATCCAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCAATGTATATCAGTACTGTGACCATAGTATTTATACTCCTTTCAAAGAAAAAANAATCGATAGCATTTGTACCTTGTTTAAAAA]

[+] EMBL BM420658             [ACCAAAGGGGTTGATTGAGAAGCAGCACTTGCTGGTAGATTAGGCAGATCCAAATACGAAAGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAATCTTTCAATCACGCTCCAATGTATATCAGTACTGTGACCATAGTATTTATACTCCTTTCAAAGAAAAAANAATCGATAGCATTTGTACCTTGTTTAAAAA]


>consensus_14728#1 ACCAAAGGGGTTGATTGAGAAGCAGCACTTGCTGGTAGATTAGGCAGATCCAAATACGAA AGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAAT CTTTCAATCACGCTCCAATGTATATCAGTACTGTGACCATAGTATTTATACTCCTTTCAA AGAAAAAANAATCGATAGCATTTGTACCTTGTTTAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14728#0      GCTCGTGGCCTCCTCCGCCGTCCACGTGAGGCAGGCAGGGCTAACTCCGCCGCGGGGCCC 60
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      ACGGAGCAGTGGGTGGGTGGGGCCCGCGGCCCGCACCGTCCCTCGGATCGCGCGGGGCCC 120
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      ACCTGGGGGGCAATTCCGTCTCCTTCCTCCCTCTCGCTTACGAACTCCGCTACCAACCGC 180
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      TTCCTTTTCCTTCTGCTGCTGCTGCTGCTGCTGCTGGTGGTGGTAGACAGCGAAGCCGGC 240
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      GAACCACCTCGGTTTCGTTGGCATCGTCATCCTCCAGGTCCACGGCCACTAGCTACCATC 300
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      TAGAAGCTTCCGGAAGCTTCGGGAAGGAAGCCGCCCCCCGCGCCGCCTTGCCGGGCCTCG 360
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      CAATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGTGG 420
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      ACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCA 480
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      AGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAG 540
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      TTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATG 600
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      GATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGA 660
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      CTTCCTTGCTATTCATATTCCTAGTTGGAATATTTGTTTCTTCATGGGTGGGTTCAACTG 720
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      TCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCACATATATTCTG 780
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      CATCGAAGCAAGTTAGCACTGCTGTTTCACCAGATCAAAATACAACGGCATTTAAAGAAG 840
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      TTGCAATAATTAGTCATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGA 900
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      TGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTGCAGTGTATATGTGCCAACCAATC 960
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      ATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCGAATTTGT 1020
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      CCATTCGAGAAGGGATAGAAATCATTGTTTCTGGAGGAATGACCATGCCGCAGGTGATTG 1080
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      CAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTG 1140
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      CGTGAGTACATCAGGTCTGCCCAGAGTTGCTGAGAGAGGGCAAATCGGTGGATGACAAAG 1200
consensus_14728#1      ------------------------------------------------------------
                                                                                   

consensus_14728#0      CTGGAACAAGGTGATTGAGAAGCAGCA-TTGCTGGTAGATTAGGCAGATCAAAATACGAA 1259
consensus_14728#1      ACCAAAGGGGTTGATTGAGAAGCAGCACTTGCTGGTAGATTAGGCAGATCCAAATACGAA 60
                           **   * **************** ********************** *********

consensus_14728#0      AGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAAT 1319
consensus_14728#1      AGTCAGTGTTGACTAGTCCGCATCGCTTAGGTTTGCTCGCTGAGTGAAAAGTTGTGTAAT 120
                       ************************************************************

consensus_14728#0      CTTTCAATCACGCTCCAAATGTATATCAGTACTGTGACCAATAGTATTTATACTCCTTTC 1379
consensus_14728#1      CTTTCAATCACGCTCCAA-TGTATATCAGTACTGTGACCA-TAGTATTTATACTCCTTTC 178
                       ****************** ********************* *******************

consensus_14728#0      AAAAGAAAAAAAAACGATAGCATTTGTACCTTGTTTAAAAAAAA 1423
consensus_14728#1      AAAGAAAAAANAATCGATAGCATTTGTACCTTGTTTAAAAA--- 219
                       ***  ***** ** ***************************   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)