These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14755#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1399 fasta sequence [TGGCCGTGCAGTGCAGTGAAGCCCGCGCCGCGCCGTTTCACGGGTCCACGACGCCGCCTGGTGGAACCGGTCCACCGTTCACGGCCACCGCCACCGCGGGCGCAGACGCCGAGGCGCGCGCGGCCTCGCCGGAGAAGAGGAGGAGGATGGCGGAGAAGGCGGTGGGGCACGGGCCCAGGACGAGGATCCGCGGCGGCGGCCTCGCCGCCGCCCCCACCGCGCCCTCCGCCGCCGCGAGGAGGCTGTCTGCGGTGTCGTACACGGCGGCGCCGAATCTGACCAAGAAGGTTCCTGACCCGAAGGTTGTGAAGCCAGCCAGGAAAACGACGCCGGTCAAGAAGCGGCCGCAGGTAGATCAGGCGCAGAAGCAGAGAGAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGAAGTTGCTTGAGAAAGATGAGGCCCTGAGGTCGGCTGAGCACTTGATTAGCCGAATCAGCGCGGCGAATGCAGCGGTCGATGAACTGAGAGGGCAGCTTACTGAGAAGGAATCGCAGATTGAATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA-CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC-TTTGGAATGTG-AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT-CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC-TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACCGAACATCTGAACATCTTAGTAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGGTGAGTTCAGTTTACCTGAACGACCTAAAGATTGACGTTCAAAAAAAAATGAGCTTTGGAGCCAACTGAATTTGATGCAGCATTTTACCCAGAAAACGAAGTCACGAGCTAACGTATGATATGTACACATTTGCCCAATGATGAAATGTTAACGCG] [+] EMBL AK073131 [TGGCCGTGCAGTGCAGTGAAGCCCGCGCCGCGCCGTTTCACGGGTCCACGACGCCGCCTGGTGGAACCGGTCCACCGTTCACGGCCACCGCCACCGCGGGCGCAGACGCCGAGGCGCGCGCGGCCTCGCCGGAGAAGAGGAGGAGGATGGCGGAGAAGGCGGTGGGGCACGGGCCCAGGACGAGGATCCGCGGCGGCGGCCTCGCCGCCGCCCCCACCGCGCCCTCCGCCGCCGCGAGGAGGCTGTCTGCGGTGTCGTACACGGCGGCGCCGAATCTGACCAAGAAGGTTCCTGACCCGAAGGTTGTGAAGCCAGCCAGGAAAACGACGCCGGTCAAGAAGCGGCCGCAGGTAGATCAGGCGCAGAAGCAGAGAGAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGAAGTTGCTTGAGAAAGATGAGGCCCTGAGGTCGGCTGAGCACTTGATTAGCCGAATCAGCGCGGCGAATGCAGCGGTCGATGAACTGAGAGGGCAGCTTACTGAGAAGGAATCGCAGATTGAATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGAC ] [+] EMBL CB620469 [ TTTCACTGGTCCACGACGCCGCCTGGTGGAACCGGTCCACCGTTCACGGCCACCGCCACCGCGGGCGCAGACGCCGAGGCGCGCGCGGCCTCGCCGGAGAAGAGGAGGAGGATGGCGGAGAAGGCGGTGGGGCACGGGCCCAGGACGAGGATCCGGGGCGGCGGCCTCGCCGCCGCCCCCACCGCGCCCTCCGCCGCCGCGAGGAGGCTGTCTGCGGTGTCGTACACGGCGGCGCCGAATCTGACCAAGAAGGTTCCTGACCCGAAGGTTGTGAAGCCAGCCAGGAGAACGACGCCGGTCAAGAAGCGGCCGCAGGTAGATCAGGCGCAGAAGCAGAGAGAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGAAGTTGCTTGAGAAAGATGAGGCCCTGAGGTCTGCTGAGCACTTGATTAGCCGAATCAGCGCGGCGAATGCAGCGGTCGATGAACTGAGAGGGCAGCTTACTGAGAAGGAATCGCAGATTGAATCCACCGGATCAGAATTGCGTGGTGCAAAGATTCAATTGGCATAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCATGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCTTTAATGAAGCTATTTATAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATCTTTTGGA ] [+] EMBL CB655683 [ ACGACGCCGCCTGGTGGAACCGGTCCACCGTTCACGGCCACCGCCACCGCGGGCGCAGACGCCGAGGCGCGCGCGGCCTCGCCGGAGAAGAGGAGGAGGATGGCGGAGAAGGCGGTGGGGCACGGGCCCAGGACGAGGATCCGCGGCGGCGGCCTCGCCGCCGCCCCCACCGCGCCCTCCGCCGCCGCGAGGAGGCTGTCTGCGGTGTCGTACACGGCGGCGCCGAATCTGACCAAGAAGGTTCCTGACCCGAAGGTTGTGAAGCCAGCCAGGAAAACGACGCCGGTCAAGAAGCGGCCGCAGGTAGATCAGGCGCAGAAGCAGAGAGAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGAAGTTGCTTGAGAAAGATGAGGCCCTGAGGTCGGCTGAGCACTTGATTAGCCGAATCAGCGCGGCGAATGCAGCGGTCGATGAACTGAGAGGGCAGCTTACTGAGAAGGAATCGCAGATTGAATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTGAAACCGGTTC ACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTAC ] [+] EMBL CB964497 [ ggaatagctGCGGTCGCAGGTAGATCAGGCGCAGAAGCAGAGAGAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGAAGTTGCTTGAGAAAGATGAGGCCCTGAGGTCGGCTGAGCACTTGATTAGCCGAATCAGCGCGGCGAATGCAGCGGTCGATGAACTGAGAGGGCAGCTTACTGAGAAGGAATCGCAGATTGAATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAACAAAAA AAAAA ] [+] EMBL CB966018 [ TCAGGCGCAGAAGCAGAGAGAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGAAGTTGCTTGAGAAAGATGAGGCCCTGAGGTCGGCTGAGCACTTGATTAGCCGAATCAGCGCGGCGAATGCAGCGGTCGATGAACTGAGAGGGCAGCTTACTGAGAAGGAATCGCAGATTGAATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAAAAA AAAAA ] [-] EMBL CB655684 [ TACTGAGAAGGAATCGCAGATTGAATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACCGAACATCTGAACATCTTAGTAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGGTGAGTTCAGTTTACCT ] [+] EMBL AI978538 [ ACTGAGAAGGAATCGCAGATTGAATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGNNNCAAGACNNNGNCNNNAAGCCTTCGTAC TCTAATTTGGATTGANGCACTGACATGnnnt ] [-] EMBL CB620470 [ GCAGATTGAATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTTTTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACGGAACATCTGAACATCTTAGTAGATGTCACACCGTGTACCATTTT ] [+] EMBL CB675791 [ GCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACCGAACATCTGAACATCTTAGTAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGGTGAGTTCAGTTTACCTGAACGACCTAAAGATTGACGTTCTCTGTGGTTTGAGCTTTGGAGCCAACTGAATTTGATGCAGCATTTTACCCAGAAAACGAAGTCACGAGCTAACGTATGATATGTACACATTTGCCCA ] [-] EMBL CB675792 [ GAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACCGAACATCTGAACATCTTAGTAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGGTGAGTTCAGTTTACCTGAACGACCTAAAGATTGACGTTCTCTGTGGTTTGAGCTTTGGAGCCAACTGAATTTGATGCAGCATTTTACCCAGAAAACGAAGTCACGAGCTAACGTATGATATGTACACATTTGCCCAATGATGAAATGTTAACGCG] [+] EMBL AU095630 [ GGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTG ] [+] EMBL AU056030 [ GGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGG ] [+] EMBL AU056032 [ GGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAACCAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCTCCTC CTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACCGAACATCTGAACATCTTAGTAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGGTGAGTTCAGTTTACCTGAACGACCTAAAGATTGACGTTCAAAAAAAAA ] [+] EMBL AU030116 [ GGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTACNCCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTG ] [+] EMBL AU056031 [ GTCTGCATNCGCTACAGCTGCTC CTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACCGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATNCGGGTGTCATAATNCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACCGAACATCTGAACATCTTAGTAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGGTGAGTTCAGTTTACCTGAACGACCTAAAGATTGACGTTCAAAAAAAAA ] [-] EMBL AI978539 [ acnnTCCTACTGACGAGTTCTTGAAGGCAGNNNNNNNGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTTTTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCNACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACCGAACATCTGAACATCTTAGTAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGG ] [+] EMBL AU166197 [ CTATGACCGAACATNTGAACATCTTAGTAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGGTGAGTTCAGTTTACCTGAACGANCTAAAGATTGATGTTCAAAAAAAAA ] consensusID : consensus_14755#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 317 fasta sequence [GATCAGGCGCAGAAGCAGAGAAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGAAGTTGCGTTGCAGCACACAGCATGCAGGCCCTGCAGGTCTGGCTGCAGCCACTTGCATTCAGCCGCAATCCAGCGCGGCGCACATGCCAGCTGGTCGCATGCAACTTGCAGCAGGGCCATGCTTCACTGCAGCAAGGCACATCTGCCAGCATTTGCAATCCCACCTGGCATCCAGCACATTGCCATTGGTTGCCACCAGCATTCCACATTTGGCCAGCAGCACACACCACAGCTTGCCACTTGGCAGCACA] [+] EMBL CB965718 [GATCAGGCGCAGAAGCAGAGAAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGAAGTTGCGTTGCAGCACACAGCATGCAGGCCCTGCAGGTCTGGCTGCAGCCACTTGCATTCAGCCGCAATCCAGCGCGGCGCACATGCCAGCTGGTCGCATGCAACTTGCAGCAGGGCCATGCTTCACTGCAGCAAGGCACATCTGCCAGCATTTGCAATCCCACCTGGCATCCAGCACATTGCCATTGGTTGCCACCAGCATTCCACATTTGGCCAGCAGCACACACCACAGCTTGCCACTTGGCAGCACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14755#0 TGGCCGTGCAGTGCAGTGAAGCCCGCGCCGCGCCGTTTCACGGGTCCACGACGCCGCCTG 60 consensus_14755#1 ------------------------------------------------------------ consensus_14755#0 GTGGAACCGGTCCACCGTTCACGGCCACCGCCACCGCGGGCGCAGACGCCGAGGCGCGCG 120 consensus_14755#1 ------------------------------------------------------------ consensus_14755#0 CGGCCTCGCCGGAGAAGAGGAGGAGGATGGCGGAGAAGGCGGTGGGGCACGGGCCCAGGA 180 consensus_14755#1 ------------------------------------------------------------ consensus_14755#0 CGAGGATCCGCGGCGGCGGCCTCGCCGCCGCCCCCACCGCGCCCTCCGCCGCCGCGAGGA 240 consensus_14755#1 ------------------------------------------------------------ consensus_14755#0 GGCTGTCTGCGGTGTCGTACACGGCGGCGCCGAATCTGACCAAGAAGGTTCCTGACCCGA 300 consensus_14755#1 ------------------------------------------------------------ consensus_14755#0 AGGTTGTGAAGCCAGCCAGGAAAACGACGCCGGTCAAGAAGCGGCCGCAGGTAGATCAGG 360 consensus_14755#1 -----------------------------------------------------GATCAGG 7 ******* consensus_14755#0 CGCAGAAGCAGAGAGAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGA 420 consensus_14755#1 CGCAGAAGCAGAGA-AAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGA 66 ************** ********************************************* consensus_14755#0 AGTTGCTTGAGAAAGATGAGGCCCTGAGGTCGGCTGAGCACTTGATTAGCCGAATCAGCG 480 consensus_14755#1 AGTTGCGTT-GCAGCACACAGCATGCAGGCC--CTGCAGGTCTGGCTG-------CAGCC 116 ****** * * * * ** *** * *** ** * **** consensus_14755#0 CGGCGAATGCAGCGGTCGATGAACTGAGAGGGCAGCTTACTGAGAAGGAATCGCAGATTG 540 consensus_14755#1 ACTTGCATTCAGCCGC-----AATCCAGCGCGGCGCACA-TGCCAGCTGGTCGCATGCAA 170 * ** **** * ** ** * * ** * ** * ***** consensus_14755#0 AATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCAC 600 consensus_14755#1 CTTGCAGCAGGGCCATGCTTCACTGCAGCAAGGCACATCTGCCAGCATTTGCAATCCCAC 230 * ** * * * * ** * *** ** ** *** * *** consensus_14755#0 TGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTA-CAAAAGTCGAAGAGCTCCAAGTA 659 consensus_14755#1 CTG-GCATCCAGCACATT-GCCATTGGTTGCCACCAGCATTCCACATTTGGCCAGCAGCA 288 * * * ** * ** **** * * * ** * ** ** * consensus_14755#0 GATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAACA 719 consensus_14755#1 CACACCACAGCT-TGCCACTTGGCAGCACA------------------------------ 317 * * ** ** *** * * * consensus_14755#0 GAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATCTTTGGAATGTGAA 779 consensus_14755#1 ------------------------------------------------------------ consensus_14755#0 CCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATG 839 consensus_14755#1 ------------------------------------------------------------ consensus_14755#0 TCTGCATACGCTACAGCTCTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAG 899 consensus_14755#1 ------------------------------------------------------------ consensus_14755#0 GCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTACTCTAATTTGGATTGAAGCAC 959 consensus_14755#1 ------------------------------------------------------------ consensus_14755#0 TGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATG 1019 consensus_14755#1 ------------------------------------------------------------ consensus_14755#0 CGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAA 1079 consensus_14755#1 ------------------------------------------------------------ consensus_14755#0 GATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATT 1139 consensus_14755#1 ------------------------------------------------------------ consensus_14755#0 GTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACCGAACATCTGAACATCTTAG 1199 consensus_14755#1 ------------------------------------------------------------ consensus_14755#0 TAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGGTGAGTTCAGTTTACC 1259 consensus_14755#1 ------------------------------------------------------------ consensus_14755#0 TGAACGACCTAAAGATTGACGTTCAAAAAAAAATGAGCTTTGGAGCCAACTGAATTTGAT 1319 consensus_14755#1 ------------------------------------------------------------ consensus_14755#0 GCAGCATTTTACCCAGAAAACGAAGTCACGAGCTAACGTATGATATGTACACATTTGCCC 1379 consensus_14755#1 ------------------------------------------------------------ consensus_14755#0 AATGATGAAATGTTAACGCG 1399 consensus_14755#1 -------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||