cluster # 14776

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Oryza sativa
cluster # 14776 cluster # 14776 Sequences # 18 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14776#0 length = 786 sequences # 14
consensus_14776#1 length = 500 sequences # 1

consensus_14776#2 length = 443 sequences # 1
consensus_14776#3 length = 348 sequences # 2

consensusID : consensus_14776#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 786
fasta sequence

                              [CCCCGATCCTCCCTCCGACCACTGCTTCCTCCCACCTGCGGAGACGGAACCCTAAAAAATTTCTTCTTCCCCTTCTCGTCCGGGCAGCGGAAGGAGCTCTAAGCCAGAAGAAGCATCATGCCTAAGATAAAAACAAGTGGTGTGAAATATCCCGATGGGTGGGAGCTTATAGAACCCACCCTCTCAGAGCTCCATTCCAAGATGAGAGAAGCTGAGAATGATCCGCATGATGGGAGAAGGAAGTGCGAGGCACTGTGGCCCATCTTCAAGATCAATCACCAGAGGAG-CCGATATCTTTATGACCTATACTACAACAGGAAGGAGATATCCCAGGAG-TTGTATGAGTTCTGCCTTGACCAGGGACATGCTGACCGTAACCTCATCGCCAAATGGAAGAAGCAAGGCTATGAGCGTCTCTGCTG---CCT-GC--G-CT-GTATCCAGACACGAGACCACAACTTTGCGACCACCTGTGTTTGCAGGGTTCCTAAGCACCTAAGGGAAGAACAGGT-GATAGAGTGTGTCCACTGTGGTTGCAAAGGTTGTGCTAGTGGTGACTAAGTATCCACTATTGGGATTACTTTTCAAGTTACATCAGGAGCAAGTTGATGAATGTAAACTGAATAACTGATGTAGTGATATCTCTGATGTACTTGG--AAAAATGCCTAGCCTGTCTAGAGAGTAGACTGAATGTACTCGTAAGATGATGGATGTGGTAATGTGAAAAAAACTTGAGTTCTTCTA--AAAAAAAAAAAAAAAAAAATGTCATGCCGTTACGTAGCGTATCGTTGA]

[+] EMBL CF282399             [CCCCGATCCTCCCTCCGACCACTGCTTCCTCCCACCTGCGGAGACGGAACCCTAAAAAATTTCTTCTTCCCCTTCTCGTCCGGGCAGCGGAAGGAGCTCTAAGCCAGAAGAAGCATCATGCCTAAGATAAAAACAAGTGGTGTGAAATATCCCTATGGGTGGGAGCTTATAGAACCCACCCTCTCAGAGCTCCATCCCAAGATGAGAGAAGCTGAGAATGATCCGCATGATGGGAGAAGGAAGTGCGAGGCACTGTGGCCCATCTTCAAGATCAATCACCAGAGGAG CCGATATCTTTATGACCTATACTACAACAGGAAGGAGATATCCCAGGAG TTGTATGAGTTCTGCCTTGACCAGGGACATGCTGACCGTAACCTCATCGCCAAATGGAAGAAGCAAGGCTATGAGCGTCTCTGCTG   CCT GC  G CT GTATCCAGACACGAGACCACAACTTTGCGACCACCTGTGTTTGCAGGGTTCCTAAGCACCTAAGGGAAGAACAGGT GATAGAGTGTGTCCA                                                                                                                                                                                                                                                                             ]
[+] EMBL AK103299             [                        CTTCCTCCCACCTGCGGAGACGGAACCCTAAAAAATTTCTTCTTCCCCTTCTCGTCCGGGCAGCGGAAGGAGCTCTAAGCCAGAAGAAGCATCATGCCTAAGATAAAAACAAGTGGTGTGAAATATCCCGATGGGTGGGAGCTTATAGAACCCACCCTCTCAGAGCTCCATTCCAAGATGAGAGAAGCTGAGAATGATCCGCATGATGGGAGAAGGAAGTGCGAGGCACTGTGGCCCATCTTCAAGATCAATCACCAGAGGAG CCGATATCTTTATGACCTATACTACAACAGGAAGGAGATATCCCAGGAG TTGTATGAGTTCTGCCTTGACCAGGGACATGCTGACCGTAACCTCATCGCCAAATGGAAGAAGCAAGGCTATGAGCGTCTCTGCTG   CCT GC  G CT GTATCCAGACACGAGACCACAACTTTGCGACCACCTGTGTTTGCAGGGTTCCTAAGCACCTAAGGGAAGAACAGGT GATAGAGTGTGTCCACTGTGGTTGCAAAGGTTGTGCTAGTGGTGACTAAGTATCCACTATTGGGATTACTTTTCAAGTTACATCAGGAGCAAGTTGATGAATGTAAACTGAATAACTGATGTAGTGATATCTCTGATGTACTTGG  AAAAATGCCTAGCCTGTCTAGAGAGTAGACTGAATGTACTCGTAAGATGATGGATGTGGTAATGTGAAAAAAACTTGAG                                                          ]
[+] EMBL CF331845             [                            CTCCCACCTGCGGAGACGGAACCCTAAAAAATTTCTTCTTCCCCTTCTCGTCCGGGCAGCGGAAGGAGCTCTAAGCCAGAAGAAGCATCATGCCTAAGATAAAAACAAGTGGTGTGAAATATCCCGATGGGTGGGAGCTTATAGAACCCACCCTCTCAGAGCTCCATTCCAAGATGAGAGAAGCTGAGAATGATCCGCATGATGGGAGAAGGAAGTGCGAGGCACTGTGGCCCATCTTCAAGATCAATCACCAGAGGAG CCGATATCTTTATGACCTATACTACAACAGGAAGGAGATATCCCAGGAG TTGTATGAGTTCTGCCTTGACCAGGGACATGCTGACCGTAACCTCATCGCCAAATGGAAGAAGCAAGGCTATGAGCGTCTCTGCTG   CCT GC  G CT GTATCCAGACACGAGACCACAACTTTGCGACCACCTGTGTTTGCAGGGTTCCTAAGCACCTAAGAGAAGAACAGGTNGATAGAGTGTGTCCACTGTAGTTGCAAAGGTTGTGCTAGTGGTGACTAAGTATCCACTATTGGGATTACTTTTCAAGTTACATCAGGAGCAAGTTGATGAATGTAAACTGAATAACTGATGTAGTGATATCTCTGATGTACT                                                                                                                                              ]
[+] EMBL D42269               [                                      CGGAGACGGAACCCTAAAAAATTTCTTCTTCCCCTTCTCGTCCGGGCAGC GAAGGAGCTCTAAGCCAGAAGAAGCATCATGCCTAAGATAAAAACAAGTGGTGTGAAATATCCCGAT GGTGGGAGCTTATAGAACCCA CCTCTCAGAGCTCCATTCCAAGATGAGAG AGCTGAG ATGATCCCGATGATGGGAGA  G ATCGGGA GCA TGTGG CCATCTTCAAGATC ATCACCAGAGag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB631517             [                                        GAGACGGAACCCTAAAAAATTTCTTCTTCCCCTTCTCGTCCGGGCAGCGGAAGGAGCTCTAAGCCAGAAGAAGCATCATGCCTAAGATAAAAACAAGTGGTGTGAAATATCCCGATGGGTGGGAGCTTATAGAACCCACCCTCTCAGAGCTCCATTCCAAGATGAGAGAAGCTGAGAATGATCCGCATGATGGGAGAAGGAAGTGCGAGGCACTGTGGCCCATCTTCAAGATCAATCACCAGAGGAG CCGATATCTTTATGACCTTTACTACACCAGGAAGGAGATATCCCAGGAG TTGTATGAGTTCTGCCTTGACCAGGGACATGCTGACCGTAACCTCATCGCCCAATGGAAGAAGCAAGGCTATGAGCGTCTCTGCTG   CCT GC  G CT GTATCCAGACACGAGACCACAACTTTGCGACCACCTGTGTTTGCAGGGTTCCTAAGCCCCTAAGGGAAGAACAGGT GATAGAGTGTGTCCCCTGTGGTTGCAAAGGTTGTGCTAGTGGTGACTAAGTATCCACTATTGGGATTACTTTTCAAGTTACATCAGGAGCAAGTTGATGAATGTAAACTGAATAACTGATGTATTGATGTCTCTGATGTACTTGG  AAAAATCCCTACCCTGTCTAGAGAGTAGACTGAATGTACTCCTAAGATCCTATATG GGTAAT TGAAA                                                                    ]
[+] EMBL CA757358             [                                         AGACGGAACCCTAAAAAATTTCTTCTTCCCCTTCTCGTCCGGGCAGCGGAAGGAGCTCTAAGCCAGAAGAAGCATCATGCCTAAGATAAAAACAAGTGGTGTGAAATATCCCGATGGGTGGGAGCTTATAGAACCCACCCTCTCAGAGCTCCATTCCAAGATGAGAGAAGCTGAGAATGATCCGCATGATGGGAGAAGGAAGTGCGAGGCACTGTGGCCCATCTTCAAGATCAATCACCAGAGGAG CCGATATCTTTATGACCTTTACTACAACAGGAAGGAGATATCCCAGGAG TTGTATGAGTTCTGCCTTGACCAGGGACATGCTGACCGTAACCTCATCGCCNAATGGAAGAAGCAAGGCTATGAGCGTCTCTTCTG   CCT GC  G CT GTATCCAGACACGAGACCACAACTTTGCGACCACCTGTGTTTGCAGGGTTCCTAAGCACCTAAGGGAAGAACAGGT GATAGAGTGTGTCCACTGTGGTTGCAAAGGTTGTGCTAGTGGTGACTAAGTATCCACTATTGGGATTACTTTTCAAGTTACATCANGAGCAAGTTGATGAATGTAAACTGAATAACTGATGTAGTGATATCTCTGA                                                                                                                                                    ]
[+] EMBL OS1197A              [                                              GAACCCTAAAAAATTTCTTCTTCCCCTTCTCGTCCGGGCAGCGGAAGGAGCTCTAAGCCAGAAGAAGCATCATGCCTAAGATAAAAACAAGTGGTGTGAAATATCCCGATGGGTGGGAGCTTATAGAACCCACCCTCTCAGAGCTCCATTCCAAGATGAGAGAAGCTGAGAATGATCCGCATGATGGGAGAAGGAAGTGCGAGGCACTGTGGCCCATCTTCAAGATCAATCACCAGAGGAG CCGATATCTTTATGACCTATACTACAACAGGAAGGAGATATCCCAGGAG TTGTATGAGTTCTGCCTTGACCAGGGACATGCTGACCGTAACCTCATCGGCAAATGGAAGAAGCAAGG TATGAGCGTCTCTGCTG    CT TC  G CT GTATTCAGACACGGGA CACAAGTTTGCGA CA CTGTGTTTG AGGGTT CTTAGGA CTATGGGAGGAA AGGT G TAGAGTGTGT CA TGTGGTT  NAAGGTntg                                                                                                                                                                                                                                                          ]
[+] EMBL CB631516             [                                                ACCCTCAAAAATTTCTTCTTCCCCTTCTCGTCCGGGCAGCGGAAGGAGCTCTAAGCCAGAAGAAGCATCATGCCTAAGATAAAAACAAGTGGTGTGAAATATCCCGATGGGTGGGAGCTTATAGAACCCACCCTCTCAGAGCTCCATTCCAAGATGAGAGAAGCTGAGAATGATCCGCATGATGGGAGAAGGAAGTGCGAGGCACTGTGGCCCATCTTCAAGATCAATCACCAGAGGAG CCGATATCTTTATGACCTTTACTACAACAGGAAGGAGATATCCCAGGAG TTGTATGAGTTCTGCCTTGACCAGGGACATGCTGACCGTAACCTCATCGCCAAATGGAAGAAGCAAGGCTATGAGCGTCTCTGCTG   CCT GC  G CT GTATCCAGACACGAGACCACAACTTTGCGACCACCTGTGTTTGCAGGGTTCCTAAGCACCTAAGGGAAGAACAGGT GATAGAGTGTGTCCACTGTGGTTGCAAAGGTTGTGCTAGTGGTGACTAAGTATCCACTATTGGGATTACTTTTCAAGTTACATCAGGAGCAAGTTGATGAATGTAAACTGAATAACTGATGTAGTGATATCTCTGATGTACTTGG  AAAAATGCCTAGCCTGTCTAGAGAGTAGACTGAATGTACTCGTAAGATGATGGATGTGGTAATGTGAAAAAAACTT                                                             ]
[+] EMBL D42417               [                                               ggaccatgAAAATTTCTTCTTCCCCTTCTCGTCCGGGCAGC GAAGGAGCTCTAAGCCAGAAGAAGCATCATGCCTAAGATAAAAACAAGTGGTGTGAAATATCCCGAT GGTGGGAGCTTATAGAACCCACCCTCTCAGAGCTCCATTCCAAGATGAGAGAAGCTGAGAATGATCCGCATGATGGGAGAAGGAAGTGCGAGGC CTGTGGCCCATCTTCAAGATCAATCACCAGAGGAGCCCGATATCTTTATGACCTATACTACAACAGGAAGGAGATATCCCAGGAG TTGTATGAGTTCTGCCTTGACCAGGGACATGCTGACCGTAACCTCATCGCCAAATGGAAGAAGC AGGCTATGAGCGTCTCT CTGACACCTCACAAGACTGGTTTCC G CCCCAGACCCCCCCCTTGC                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OSRAK136             [                                               ggaccatgAAAATTTCTTCTTCCCCTTCTCGTCCGGGCAGC GAAGGAGCTCTAAGCCAGAAGAAGCATCATGCCTAAGATAAAAACAAGTGGTGTGAAATATCCCGAT GGTGGGAGCTTATAGAACCCACCCTCTCAGAGCTCCATTCCAAGATGAGAGAAGCTGAGAATGATCCGCATGATGGGAGAAGGAAGTGCGAGGC CTGTGGCCCATCTTCAAGATCAATCACCAGAGGAGCCCGATATCTTTATGACCTATACTACAACAGGAAGGAGATATCCCAGGAG TTGTATGAGTTCTGCCTTGACCAGGGACATGCTGACCGTAACCTCATCGCCAAATGGAAGAAGC AGGCTATGAGCGTCTCT CTGACACCTCACAAGACTGGTTTCC G CCCCAGACCCCCCCCTTGC                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OSMG10IP             [                                                                                 GGGCAGC GAAGGAGCTCTAAGCCAGAAGAAGCATCATGCCTAAGATAAAAACAAGTGGTGTG AATAT CCGAT GGTGGGAGCTTATAGAACCCACCCTCTCAGAGCTCCATTCCAAGATGAGAGAAGCTGAGAATGATCCGCATGATGGGAGAAGGAAGTGCGAGGCCATGTGGCCCATCTTCAAGATCAATCACCAGAGGAG CCGATATCTTTATGACCTATACTACAACAGGAAGGAGATATCCCAGGAG TTGTATGAGTTCTGCCTTGACCAGGGACATGCTGACCGTAACCTCATCGCCAAATGGAAGAAGCAAGGCTATGAGCGTCTCTGCTG   CCT GC  G CT GTATCCAGACACGAGACCACAACTTTGCGACCACCTGTGTTTGCAGGGTTCCTAAGCACCTAAGGGAAG ACA GT  ATAGAGTGTGTCCACTGTGGTTGCAAAGGTTGTGCTAGTGGTGGCTAAGTATCCACTATTGGGATTACTTTTCAAGTTACATCAGGAGCAAGTTGATGAATGTAAACTGAATAACTGATGTAGTGATATCTCTGATGTACTTGGAAAAAAATGCCTAGCCTGTCTAGAGAGTAGACTGAATGTACTCGTAAGGTGATGGATGTGGTAATGTGAAAAAAACT                                                              ]
[-] EMBL CF331846             [                                                                                                                                                                                                  TTCCAAGATGAGAGAAGCTGAGAATGATCCGCATGATGGGAGAAGGAAGTGCGAGGCACTGTGGCCCATCTTCAAGATCAATCACCAGAGGAG CCGATATCTTTATGACCTATACTACAACAGGAAGGAGATATCCCAGGAG TTGTATGAGTTCTGCCTTGACCAGGGACATGCTGACCGTAACCTCATCGCCAAATGGAAGAAGCAAGGCTATGAGCGTCTCTGCTG   CCT GC  G CT GTATCCAGACACGAGACCACAACTTTGCGACCACCTGTGTTTGCAGGGTTCCTAAGCACCTAAGAGAAGAACAGGT GATAGAGTGTGTCCACTGTAGTTGCAAAGGTTGTGCTAGTGGTGACTAAGTATCCACTATTGGGATTACTTTTCAAGTTACATCAGGAGCAAGTTAATGAATGTAAACTGAATAACTGATGTAGTGATATCTCTGATGTACTTGG  AAAAATGCCTAGCCTGTCTAGAGAGTAGACTGAATGTACTCGTAAGATGATGGATGTGGTAATGTGAAAAAAACTTGAGTTCTTCTA  CCAAAAAAAAAAAAAAAAATGTCATGCCGTTACGTAGCGTATCGTTGA]
[+] EMBL BI799709             [                                                                                                                                                                                                                                                                   CCATCTTCAAGATCAATCACCAGAGGAG CCGATATCTTTATGACCTTTACTACAACAGGAAGGAGATATCCCAGGAGCTTGTATGAGTTCTGCCTTGACCAGGGACATGCTGACCGTAACCTCATCGCCAAATGGAAGAAGCAAGGCTATGAGCGTCTCTGCTG   CCT GC  G CT GTATCCAGACACGAGACCACAACTTTGCGACCACCTGTGTTTGCAGGGTTCCTAAGCACCTAAGGGAAGAACAGGT GATAGAGTGTGTCCACTGTGGTTGC AAGGTTGTGCTAGTGGTGACTAAGTATCCACTATTGGGATTACTTTTCAAGTTACATCAGGAGCAAGTTGATGAATGTAAACTGAATAACTGATGTAGTGATATCTCTGATGTACTTGG  AAAAATGCCTAGCCTGTCTAGAGAGTAGACTGAATGTACTCGTAAGATGATGGATGTGGTAATGTGAAAAAAACTTGAGTTCTTCTA  AAAAAAAAA                                       ]
[+] EMBL CF330970             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGTGTTTGCAGGGTTCCTAAGCACCTAAGGGAAGAACAGGT GATAGAGTGTGTCCACTGTGGTTGCAAAGGTTGTGCTAGTGGTGACTAAGTATCCACTATTGGGATTACTTTTCAAGTTACATCAGGAGCAAGTTGATGAATGTAAACTGAATAACTGATGTAGTGATATCTCTGATGTACTTGG  AAAAATGCCTAGCCTGTCTAGAGAGTAGACTGAATGTACTCGTAAGATGATGGATGTGGTAATGTGAAAAAAACTTGAGTTCTTCTANNAAAAAAAAAAAAAAAAAAA                             ]




>consensus_14776#0
CCCCGATCCTCCCTCCGACCACTGCTTCCTCCCACCTGCGGAGACGGAACCCTAAAAAAT
TTCTTCTTCCCCTTCTCGTCCGGGCAGCGGAAGGAGCTCTAAGCCAGAAGAAGCATCATG
CCTAAGATAAAAACAAGTGGTGTGAAATATCCCGATGGGTGGGAGCTTATAGAACCCACC
CTCTCAGAGCTCCATTCCAAGATGAGAGAAGCTGAGAATGATCCGCATGATGGGAGAAGG
AAGTGCGAGGCACTGTGGCCCATCTTCAAGATCAATCACCAGAGGAGCCGATATCTTTAT
GACCTATACTACAACAGGAAGGAGATATCCCAGGAGTTGTATGAGTTCTGCCTTGACCAG
GGACATGCTGACCGTAACCTCATCGCCAAATGGAAGAAGCAAGGCTATGAGCGTCTCTGC
TGCCTGCGCTGTATCCAGACACGAGACCACAACTTTGCGACCACCTGTGTTTGCAGGGTT
CCTAAGCACCTAAGGGAAGAACAGGTGATAGAGTGTGTCCACTGTGGTTGCAAAGGTTGT
GCTAGTGGTGACTAAGTATCCACTATTGGGATTACTTTTCAAGTTACATCAGGAGCAAGT
TGATGAATGTAAACTGAATAACTGATGTAGTGATATCTCTGATGTACTTGGAAAAATGCC
TAGCCTGTCTAGAGAGTAGACTGAATGTACTCGTAAGATGATGGATGTGGTAATGTGAAA
AAAACTTGAGTTCTTCTAAAAAAAAAAAAAAAAAAAATGTCATGCCGTTACGTAGCGTAT
CGTTGA

consensusID : consensus_14776#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 500
fasta sequence

                              [AGATCAATCACCANANGAGCGATGATCTTTATNACCTTTTGTCTACTACATGNAAGGAGATATCCCAGGAATGTATGAGTTNTGGCCNTGACCAGGGGACATNNTGTCCGTGGTCCTCATGCGCACANAATGGTAGAAGCAAGGCTATGATGCGTCTGCTGTTTGCCTGCGCTGTATCCAGACAGCGAGGACCACANACTTTGCGACCACCTGTGTTGNCAGGGTTCTCTAAGCACCTAAGGGAAGTAACAGTGATAGAGTGTGTCCAACTGTGGTTGCAAAGTTGTGCTATGTGTGACTAAGTATCCACTATTGGGAGTTACTNTTCAAGTTTACATCAGGAGCCAAGTTGANGAATGTAAACTGAATAACTGATGTAGTGATATCTCTGATGTACTTGGAAAAATGCCTAGCCTGTCTGGAGAGTAGACTGAATGTACTCGTAAGATGATGGATGTGGTAATGTGAAAAAAACTTGAGTTCTTCTACCAAAAAAAAAA]

[+] EMBL BI807274             [AGATCAATCACCANANGAGCGATGATCTTTATNACCTTTTGTCTACTACATGNAAGGAGATATCCCAGGAATGTATGAGTTNTGGCCNTGACCAGGGGACATNNTGTCCGTGGTCCTCATGCGCACANAATGGTAGAAGCAAGGCTATGATGCGTCTGCTGTTTGCCTGCGCTGTATCCAGACAGCGAGGACCACANACTTTGCGACCACCTGTGTTGNCAGGGTTCTCTAAGCACCTAAGGGAAGTAACAGTGATAGAGTGTGTCCAACTGTGGTTGCAAAGTTGTGCTATGTGTGACTAAGTATCCACTATTGGGAGTTACTNTTCAAGTTTACATCAGGAGCCAAGTTGANGAATGTAAACTGAATAACTGATGTAGTGATATCTCTGATGTACTTGGAAAAATGCCTAGCCTGTCTGGAGAGTAGACTGAATGTACTCGTAAGATGATGGATGTGGTAATGTGAAAAAAACTTGAGTTCTTCTACCAAAAAAAAAA]




>consensus_14776#1
AGATCAATCACCANANGAGCGATGATCTTTATNACCTTTTGTCTACTACATGNAAGGAGA
TATCCCAGGAATGTATGAGTTNTGGCCNTGACCAGGGGACATNNTGTCCGTGGTCCTCAT
GCGCACANAATGGTAGAAGCAAGGCTATGATGCGTCTGCTGTTTGCCTGCGCTGTATCCA
GACAGCGAGGACCACANACTTTGCGACCACCTGTGTTGNCAGGGTTCTCTAAGCACCTAA
GGGAAGTAACAGTGATAGAGTGTGTCCAACTGTGGTTGCAAAGTTGTGCTATGTGTGACT
AAGTATCCACTATTGGGAGTTACTNTTCAAGTTTACATCAGGAGCCAAGTTGANGAATGT
AAACTGAATAACTGATGTAGTGATATCTCTGATGTACTTGGAAAAATGCCTAGCCTGTCT
GGAGAGTAGACTGAATGTACTCGTAAGATGATGGATGTGGTAATGTGAAAAAAACTTGAG
TTCTTCTACCAAAAAAAAAA

consensusID : consensus_14776#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 443
fasta sequence

                              [CCATGGCTGNACCCGTAACCCTCATCCGCCCAAATGGAAGNAGCCAAGGCTTATGGAGCGTCTCTGCTTNCCTGCGCTNTATCCCAGACACGAGACCACAACTTTGCGACCACCTGTGTTTGCAGGGTTCCTAAGCACCTAAGGGAAGAACAGGTGATAGAGTGTGTCCACTGTGGTTGCAAAGGTTGTGCTAGTGGTGACTAAGTATCCACTATTGGGATTACTTTTCAAGTTACATCAGGAGCAAGTTGATGAATGTAAACTGAATAACTGATGTAGTGATATCTCTGATGTACTTGGAAAAATGCCTAGCCTGTCTAGAGAGTAGACTGAATGTACTCGTAAGATGATGGATGTGGTAATGTGAAAAAAACTTGAGTTCTTCTACCACTTCTATCTTATCTTATTTCCANTCNTTNTAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU057923             [CCATGGCTGNACCCGTAACCCTCATCCGCCCAAATGGAAGNAGCCAAGGCTTATGGAGCGTCTCTGCTTNCCTGCGCTNTATCCCAGACACGAGACCACAACTTTGCGACCACCTGTGTTTGCAGGGTTCCTAAGCACCTAAGGGAAGAACAGGTGATAGAGTGTGTCCACTGTGGTTGCAAAGGTTGTGCTAGTGGTGACTAAGTATCCACTATTGGGATTACTTTTCAAGTTACATCAGGAGCAAGTTGATGAATGTAAACTGAATAACTGATGTAGTGATATCTCTGATGTACTTGGAAAAATGCCTAGCCTGTCTAGAGAGTAGACTGAATGTACTCGTAAGATGATGGATGTGGTAATGTGAAAAAAACTTGAGTTCTTCTACCACTTCTATCTTATCTTATTTCCANTCNTTNTAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14776#2
CCATGGCTGNACCCGTAACCCTCATCCGCCCAAATGGAAGNAGCCAAGGCTTATGGAGCG
TCTCTGCTTNCCTGCGCTNTATCCCAGACACGAGACCACAACTTTGCGACCACCTGTGTT
TGCAGGGTTCCTAAGCACCTAAGGGAAGAACAGGTGATAGAGTGTGTCCACTGTGGTTGC
AAAGGTTGTGCTAGTGGTGACTAAGTATCCACTATTGGGATTACTTTTCAAGTTACATCA
GGAGCAAGTTGATGAATGTAAACTGAATAACTGATGTAGTGATATCTCTGATGTACTTGG
AAAAATGCCTAGCCTGTCTAGAGAGTAGACTGAATGTACTCGTAAGATGATGGATGTGGT
AATGTGAAAAAAACTTGAGTTCTTCTACCACTTCTATCTTATCTTATTTCCANTCNTTNT
AAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_14776#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 348
fasta sequence

                              [GCCCCCAACTTTGGGCCCCCCTGTGTTTGCAGGGTTCTTAAGCCCCTAAGGGAAGAACAGGTGATAAAGTGTGTCCCCTGTGGTTGCAAAGGTTGTGGTAGTGGGGACTAAGTATCCCCTATTGGGATTACTTTTCAAGTTACATCAGGAGCAAGTTGATGAATGTAAACTGAAAAACTGAGGTAGGGATATTTTTGATGGACTTGGAAAAAAGCCTAGCCTGTTTAAAAAGTAGACTGAATGTACTTGTAAAATGATGGATGTGGTAATGTGAAAAAAACTTGGGTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGCCGTTACGTA]

[-] EMBL CF282398             [GCCCCCAACTTTGGGCCCCCCTGTGTTTGCAGGGTTCTTAAGCCCCTAAGGGAAGAACAGGTGATAAAGTGTGTCCCCTGTGGTTGCAAAGGTTGTGGTAGTGGGGACTAAGTATCCCCTATTGGGATTACTTTTCAAGTTACATCAGGAGCAAGTTGATGAATGTAAACTGAAAAACTGAGGTAGGGATATTTTTGATGGACTTGGAAAAAAGCCTAGCCTGTTTAAAAAGTAGACTGAATGTACTTGTAAAATGATGGATGTGGTAATGTGAAAAAAACTTGGGTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA             ]
[-] EMBL CF330971             [                      GTGTTTGCAGGGTTCCTAAGCCCCTAAGGGAAGAACAGGTGATAGAGTGTGTCCCCTGTGGTTGCAAAGGTTGTGCTAGTGGTGACTAAGTATCCCCTATTGGGATTACTTTTCAAGTTACATCAGGAGCAAGTTGATGAATGTAAACTGAATAACTGATGTAGTGATATCTCTGATGTACTTGGAAAAATGCCTAGCCTGTTTAGAGAGTAGACTGAATGTACTCGTAAGATGATGGATGTGGTAATGTGAAAAAAACTTGAGTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAGTCATGCCGTTACGTA]




>consensus_14776#3
GCCCCCAACTTTGGGCCCCCCTGTGTTTGCAGGGTTCTTAAGCCCCTAAGGGAAGAACAG
GTGATAAAGTGTGTCCCCTGTGGTTGCAAAGGTTGTGGTAGTGGGGACTAAGTATCCCCT
ATTGGGATTACTTTTCAAGTTACATCAGGAGCAAGTTGATGAATGTAAACTGAAAAACTG
AGGTAGGGATATTTTTGATGGACTTGGAAAAAAGCCTAGCCTGTTTAAAAAGTAGACTGA
ATGTACTTGTAAAATGATGGATGTGGTAATGTGAAAAAAACTTGGGTTTTTTTTAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGCCGTTACGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14776#2      ------------------------------------------------------------
consensus_14776#3      ------------------------------------------------------------
consensus_14776#0      CCCCGATCCTCCCTCCGACCACTGCTTCCTCCCACCTGCGGAGACGGAACCCTAAAAAAT 60
consensus_14776#1      ------------------------------------------------------------
                                                                                   

consensus_14776#2      ------------------------------------------------------------
consensus_14776#3      ------------------------------------------------------------
consensus_14776#0      TTCTTCTTCCCCTTCTCGTCCGGGCAGCGGAAGGAGCTCTAAGCCAGAAGAAGCATCATG 120
consensus_14776#1      ------------------------------------------------------------
                                                                                   

consensus_14776#2      ------------------------------------------------------------
consensus_14776#3      ------------------------------------------------------------
consensus_14776#0      CCTAAGATAAAAACAAGTGGTGTGAAATATCCCGATGGGTGGGAGCTTATAGAACCCACC 180
consensus_14776#1      ------------------------------------------------------------
                                                                                   

consensus_14776#2      ------------------------------------------------------------
consensus_14776#3      ------------------------------------------------------------
consensus_14776#0      CTCTCAGAGCTCCATTCCAAGATGAGAGAAGCTGAGAATGATCCGCATGATGGGAGAAGG 240
consensus_14776#1      ------------------------------------------------------------
                                                                                   

consensus_14776#2      ------------------------------------------------------------
consensus_14776#3      ------------------------------------------------------------
consensus_14776#0      AAGTGCGAGGCACTGTGGCCCATCTTCAAGATCAATCACCAGAGGAGCCGATATCTTTAT 300
consensus_14776#1      ----------------------------AGATCAATCACCANANGAGCGATGATCTTTAT 32
                                                                                   

consensus_14776#2      ------------------------------------------------------------
consensus_14776#3      ------------------------------------------------------------
consensus_14776#0      GACCTATA--CTACAACA-GGAAGGAGATATCCCAGGAGTTGTATGAGTTCTG-CCTTGA 356
consensus_14776#1      NACCTTTTGTCTACTACATGNAAGGAGATATCCCAGGAAT-GTATGAGTTNTGGCCNTGA 91
                                                                                   

consensus_14776#2      ----CCATGGCTGNACCCGTAACCCTCATCCGCCCAAATGGAAGNAGCCAAGGCTTATGG 56
consensus_14776#3      ------------------------------------------------------------
consensus_14776#0      CCAGGG-ACATGCTGACCGTAA-CCTCAT---CGCCAAATGGAAGAAGCAAGGCT-ATGA 410
consensus_14776#1      CCAGGGGACATNNTGTCCGTGGTCCTCATGCGCACANAATGGTAGAAGCAAGGCT-ATGA 150
                                                                                   

consensus_14776#2      AGCGTCT-CTGCTTNCCTGCGCTNTATCCCAGACACGAG-ACCACAA-CTTTGCGACCAC 113
consensus_14776#3      --------------------------------------G-CCCCCAA-CTTTGGGCCCCC 20
consensus_14776#0      -GCGTCT-CTGCT-GCCTGCGCTGTATCCAGACA-CGAG-ACCACAA-CTTTGCGACCAC 464
consensus_14776#1      TGCGTCTGCTGTTTGCCTGCGCTGTATCCAGACAGCGAGGACCACANACTTTGCGACCAC 210
                                                             *  ** **  ***** * ** *

consensus_14776#2      CTGTGTTTGCAGGGTTC-CTAAGCACCTAAGGGAAGAACAGGTGATAGAGTGTGTCCA-C 171
consensus_14776#3      CTGTGTTTGCAGGGTTC-TTAAGCCCCTAAGGGAAGAACAGGTGATAAAGTGTGTCCC-C 78
consensus_14776#0      CTGTGTTTGCAGGGTTC-CTAAGCACCTAAGGGAAGAACAGGTGATAGAGTGTGTCCA-C 522
consensus_14776#1      CTGTGTTGNCAGGGTTCTCTAAGCACCTAAGGGAAGTAACAGTGATAGAGTGTGTCCAAC 270
                       *******  ********  ***** *********** *   ****** *********  *

consensus_14776#2      TGTGGTTGCAAAGGTTGTGCTAGTGGTGACTAAGTATCCACTATTGGGA-TTACTTTTCA 230
consensus_14776#3      TGTGGTTGCAAAGGTTGTGGTAGTGGGGACTAAGTATCCCCTATTGGGA-TTACTTTTCA 137
consensus_14776#0      TGTGGTTGCAAAGGTTGTGCTAGTGGTGACTAAGTATCCACTATTGGGA-TTACTTTTCA 581
consensus_14776#1      TGTGGTTGCAAAG-TTGTGCTATGTGTGACTAAGTATCCACTATTGGGAGTTACTNTTCA 329
                       ************* ***** **   * ************ ********* ***** ****

consensus_14776#2      AGTT-ACATCAGGAGC-AAGTTGATGAATGTAAACTGAATAACTGATGTAGTGATATCTC 288
consensus_14776#3      AGTT-ACATCAGGAGC-AAGTTGATGAATGTAAACTGAAAAACTGAGGTAGGGATATTTT 195
consensus_14776#0      AGTT-ACATCAGGAGC-AAGTTGATGAATGTAAACTGAATAACTGATGTAGTGATATCTC 639
consensus_14776#1      AGTTTACATCAGGAGCCAAGTTGANGAATGTAAACTGAATAACTGATGTAGTGATATCTC 389
                       **** *********** ******* ************** ****** **** ***** * 

consensus_14776#2      TGATGTACTTGGAAAAATGCCTAGCCTGTCTAGAGAGTAGACTGAATGTACTCGTAAGAT 348
consensus_14776#3      TGATGGACTTGGAAAAAAGCCTAGCCTGTTTAAAAAGTAGACTGAATGTACTTGTAAAAT 255
consensus_14776#0      TGATGTACTTGGAAAAATGCCTAGCCTGTCTAGAGAGTAGACTGAATGTACTCGTAAGAT 699
consensus_14776#1      TGATGTACTTGGAAAAATGCCTAGCCTGTCTGGAGAGTAGACTGAATGTACTCGTAAGAT 449
                       ***** *********** *********** *  * ***************** **** **

consensus_14776#2      GATGGATGTGGTAATGTGAAAAAAACTTGAGTTCTTCTACCACTTCTATCTTATCTTATT 408
consensus_14776#3      GATGGATGTGGTAATGTGAAAAAAACTTGGGTTTTTTT-------------TAAAAAAAA 302
consensus_14776#0      GATGGATGTGGTAATGTGAAAAAAACTTGAGTTCTTCT---------------------- 737
consensus_14776#1      GATGGATGTGGTAATGTGAAAAAAACTTGAGTTCTTCT---------------------- 487
                       ***************************** *** ** *                      

consensus_14776#2      TCCANTCNTTNTAAAAAAAAAAAAAAAAAAAAAAA----------------------- 443
consensus_14776#3      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGCCGTTACGTA------------ 348
consensus_14776#0      ---------AAAAAAAAAAAAAAAAAAAATGTCATGCCGTTACGTAGCGTATCGTTGA 786
consensus_14776#1      ---------ACCAAAAAAAAAA------------------------------------ 500
                                   **********