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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14793#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1756 fasta sequence
[TGGGCGTCAGGACCACT-CCCTTCCGGCGCGGCGGAGATCGGAATCGGCGGCGATGGCGGCGACGACGACGAGACCCCTCCCCCTCCTCCTCCTGCTGCTTCTGCCTCCTCTCCTCCTCCTGCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGAAGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTTTATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAAAAGCTGACTTGCTTGTCCGCAATCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAGCTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGTTCATTGGGTTTGGGGTGAATGAGTCGTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGATTTTTCTGAGGACTTCATGGTCACTTATGATTTTGATAAGGTTCCTGCATTGGTTTCACTTCATCCAAAGTACAAAGAACAAAGTGTATTTTATGGCCCATTTGAAGGAAGTTTCTTGGAAGATTTTATACGGCAATCCCTGCTTCCTTTGACTGTCCCCATCAACACAGAGACACTCAAAATGTTGGATGATGATGACAGAAAAGTTGTTCTTGCAATTTTGGAGGATGATTCAGATGAAACTTCTTCACAGTTGGTAAAAGTTTTGAGGTCTGCTGCCAATGCAAACCGTGACTTGGTGTTTGGGTATGTCGGAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGAT-ATTTCCAAGAGCTCACAGCTGCCAAAGCTAAT-CGTCTGGGATAGAAATGAGGAGTATG-AAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAA-CAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGT-GATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTCCTGCGGTTCTGCCTTCTGTTCCTCTGTTTATTTGTTAATTAGAA-CTAAAACTAGCTTCCACATGTGCATGATAGAAAATGTGATTCTTAGTTCAGTTCTAATTTGAAC-AGTT-CTGTGAAAAATATTTTTGTTGTCCAACTATTGCCAAAACGTTTGTAAAAAAAAAAAAAAGGTAATAAGGCGTGTATATCTGGAGCGAGGTTTTGTTTACTGCTAGGCTTTTATTTATCACTGCTACCTTTGATAAAAAAAAAAA]
[+] EMBL AK069367 [TGGGCGTCAGGACCACT CCCTTCCGGCGCGGCGGAGATCGGAATCGGCGGCGATGGCGGCGACGACGACGAGACCCCTCCCCCTCCTCCTCCTGCTGCTTCTGCCTCCTCTCCTCCTCCTGCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGAAGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTTTATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAGAAGCTGACTTGCTTGTCCGCAATCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAGCTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGTTCATTGGGTTTGGGGTGAATGAGTCGTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGATTTTTCTGAGGACTTCATGGTCACTTATGATTTTGATAAGGTTCCTGCATTGGTTTCACTTCATCCAAAGTACAAAGAACAAAGTGTATTTTATGGCCCATTTGAAGGAAGTTTCTTGGAAGATTTTATACGGCAATCCCTGCTTCCTTTGACTGTCCCCATCAACACAGAGACACTCAAAATGTTGGATGATGATGACAGAAAAGTTGTTCTTGCAATTTTGGAGGATGATTCAGATGAAACTTCTTCACAGTTGGTAAAAGTTTTGAGGTCTGCTGCCAATGCAAACCGTGACTTGGTGTTTGGGTATGTCGGAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGAT ATTTCCAAGAGCTCACAGCTGCCAAAGCTAAT CGTCTGGGATAGAAATGAGGAGTATG AAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAA CAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGT GATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTCCTGCGGTTCTGCCTTCTGTTCCTCTGTTTATTTGTTAATTAGAA CTAAAACTAGCTTCCACATGTGCATGATAGAAAATGTGATTCTTAGTTCAGTTCTAATTTGAAC AGTT CTGTGAAAAATATT ]
[+] EMBL CB667078 [ ACTCCCCCTCCGGCGCGGCGGAGATCGGAATCGGCGGCGATGGCGGCGACGACGACGAGACCCCTCCCCCTCCTCCTCCTGCTGCTTCTGCCTCCTCTCCTCCTCCTGCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGAAGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTTTATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAAAAGCTGACTTGCTTGTCCGCAATCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAGCTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGTTCATTGGGTTTGGGGTGAATGAGTCGTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGATTTTTCTGAGGACTTCATGGTCACTTATGATTTTGATAAGGTTCCTGCATTGGTTTCACTTCATCCAAAGTACAAAGAACAAAGTGTATTTTATGGCCCATTTGAAGGAAGTTTCTTGGAAGATTTTATACcg ]
[+] EMBL CB649966 [ ACT CCCTTCCGGCGCGGCGGAGATCGGAATCGGCGGCGATGGCGGCGACGACGACGAGACCCCTCCCCCTCCTCCTCCTGCTGCTTCTGCCTCCTCTCCTCCTCCTGCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGAAGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTTTATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAAAAGCTGACTTGCTTGTCCGCAATCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAGCTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGTTCATTGGGTTTGGGGTGAATGAGTCGTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGATTTTTCTGAGGACTTCATGGTCACTTATGATTTTGATAAGGTTCCTGCATTGGTTTCACTTCATCCAAAGTACAAAGAACAAAGTGTATTTTATGGCCCATTTGAAGGAAGTTTCTTGGAAGATTTTATACGGCAATCCCTGCTTCCTTTGACTGTCCCCATCAACACAGAGACACTCAAAATGTT ]
[+] EMBL CB643800 [ ACT CCCTCTTGGAGCGGCGGAGATCGGAATCGGGGGCGATGGCGGCGACGACGACGAGACCCCTCCCCCTCCTCCTCCTGCCGCTTCTGCCTCCTCTCCTCCTCCTGCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGATGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGAAGCTGCACCGGTGTTGGTAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTTTATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAAAAGCTGACTTGCTTGTCCGCAATCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAGCTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGTTCATTGGGTTTGGGGTGAATGAGTCGTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGATTTTTCTGAGGACTTCATGGTCACTTATGATTTTGATAAGGTTCCTGCATTGGTTTCACTTCATCCAAAGTACAAAGAACAAAGTGTATTTTATGGCCCATTTGAAAGAAGTTTCTTGGAAGATTTTATACGGCAATCCCTGCTTTCTTTGA ]
[+] EMBL AU085884 [ CCTTCCGGCGCGGCGGAGATCGGAATCGGCGGCGATGGCGGCGACGACGACGAGACCCCTCCCCCTCCTCCTCCTGCTGCTTCTGCCTCCTCTCCTCCTCCTGCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCG CATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGAAGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTT CCTANACTGATGCTTTTTAT CACGGGGT CCCATCG ATANATGGGTTCAAGAAA NTGACTTG ]
[+] EMBL CB661649 [ GAATCGGCGGCGATGGCGGCGACGACGACGAGACCCCTCCCCCTCCTCCTCCTGCTGCTTCTGCCTCCTCTCCTCCTCCTGCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGAAGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTTTATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAAAAGCTGACTTGCTTGTCCGCAATCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAGCTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGTTCATTGGGTTTGGGGTGAATGAGTCGTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGATTTTTCTGAGGACTTCATGGTCACTTATGATTTTGATAAGGTTCCTGCATTGGTTTCACTTCATCCAAAGTACAAAGAACAAAGTGTATTTTATGGCCCATTTGAAGGAAGTTTCTTGGAAGATTTTATACGGCAATCCCTGCTTCCTTTGACTGTCCCCATCAACACAGAGACACTCAAAATGTTGGA ]
[+] EMBL CB669215 [ CTGCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGAAGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTTTATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAAAAGCTGACTTGCTTGTCCGCAATCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAGCTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGATCATTGGGTTTGGGGAGAATGAGTCGTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGATTTTTCTGAGGACTTCATG ]
[+] EMBL CB669216 [ GCTGCTCTCCTTCCATGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTATATGAAGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAGATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTTTATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAAAAGCTGACTTGCTTGTCCGCAATCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAGCTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGTTCATTGGGTTTGGGGTGAATGAGTCGTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGATTTTTCTGAGGACTTCATGGTCACTT ]
[+] EMBL BI118715 [ AAAGTGTATTTTATGGCCCATTTGAAGGAAGTTTCTTGGAAGATTTTATACGGCAATCCCTGCTTCCTTTGACTGTCCCCATCAACACAGAGACACTCAAAATGTTGGATGATGATGACAGAAAAGTTGTTCTTGCAATTTTGGAGGATGATTCAGATGAAACTTCTTCACAGTTGGTAAAGGTTTTGAGGTCTGCTGCCAATGCAAACCGTGACTTGGTGTTTGGGTATGTCGGAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGAT ATTTCCAAGAGCTCACAGCTGCCAAAGCTAAT CGTCTGGGATAGAAATGAGGAGTATGAAAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAARCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAG ACAACCAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATATATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTG AAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAAAGGTCAGGTTTCAAACTTCCAAGT GATGCAGTCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTCCTGCGGTTCTGCCTTCTGTTCCTCTGCTTATTTGTTAATTAGAA CTAAAACTAGCTTCCACATGTGCATGATAGAAAATGTGATTCTTAGTTCAGTTCTAATTTGAGC AGTT CTGTGAAAAATATTTTTGTTGTCCAACTATTGCCA ]
[+] EMBL CF327550 [ CCATTTGAAGGAAGTTTCTTGGAAGATTTTATACGGCAATCCCTGCTTCCTTTGACTGTCCCCATCAACACAGAGACACTCAAAATGTTGGATGATGATGACAGAAAAGTTGTTCTTGCAATTTTGGAGGATGATTCAGATGAAACTTCTTCACAGTTGGTAAAAGTTTTGAGGTCTGCTGCCAATGCAAACCGTGACTTGGTGTTTGGGTATGTCGGAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGAT ATTTCCAAGAGCTCACAGCTGCCAAAGCTAAT CGTCTGGGATAGAAATGAGGAGTATG AAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAA CAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAA ]
[-] EMBL CB649967 [ ACAGAGACACTCAAAATGTTGGATGATGATGACAGAAAAGTTGTTCTTGCAATTTGGGAGGATGATTCAGATGAAACTTCTTCACAGTTGGTAAAAGTTTTGAGGTCTGCTGCCAATGCAAACCGTGACTTGGTGTTTGGGTATGTCGGAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGAT ATTTCCAAGAGCTCACAGCTGCCAAAGCTAAT CGTCTGGGATAGAAATGAGGAGTATG AAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAA CAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGT GATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTCCTGCGGTTCTGCCTTCTGTTCCTCTGTTTATTTGTTAATTAGAA CTAAAACTAGCTTCCACATGTGCATGATAGAAAATGTGATTCTTAGTTCAGTTCTAATTTGAAC AGTT CTGTGAAAAATATTTTTGTTGTCCAACTATTGCCAAAACGTTTGTAAAAAAAAAAAga ]
[-] EMBL CB661650 [ ACAGAAAAGTTGTTCTTGCAATTTTGGAGGATGATTCAGATGAAACTTCTTCACAGTTGGTAAAAGTTTTGAGGTCTGCTGCCAATGCAAACCGTGACTTGGTGTTTGGGTATGTCGGAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGAT ATTTCCAAGAGCTCACAGCTGCCAAAGCTAAT CGTCTGGGATAGAAATGAGGAGTATG AAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGACCAA CAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGCTATCCCCCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGT GATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTCCTGCGGTTCTGCCTTCTGTTCCTCTGTTTATTTGTTAATTAGAA CTAAAACTAGCTTCCACATGTGCATGATAGAAAATGTGATTCTTAGTTCAGTTCTAATTTGAAC AGTT CTGTGAAAAATATTTTTGTTGTCCAACTATTGCCAAAACGTTTGTCAAAAAAAAAAAAAGG ]
[-] EMBL CB643801 [ CGGAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGAT ATTTCCAAGAGCTCACAGCTGCCAAAGCTAAT CGTCTGGGATAGAAATGAGGAGTATG AAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAA CAAAGAAGAAAGTCAGTGGCTCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTATTATATGTGTCTTCGCTGTTTTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTTCCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGT GATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATGTAGTTGTGCCTTGCGCAGTAGTGCTTTCCTGCGGTTTTGCCTTCTGTTCCTTTGTTTATTTGTTAATTAGAA GTAAAAGTAGCTTCCACATGTGCATGATAGAAAATGTGATTGTTAGTTCACTTATAATTTGAGC GGTTGATGTGAAA ]
[+] EMBL AK058722 [ GAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGAT ATTTCCAAGAGCTCACAGCTGCCAAAGCTAAT CGTCTGGGATAGAAATGAGGAGTATG AAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAA CAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGT GATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTCCTGCGGTTCTGCCTTCTGTTCCTCTGTTTATTTGTTAATTAGAA CTAAAAC ]
[+] EMBL AU085885 [ TTTGATAATTTCCAAGAGCTCACAGCTNCCAAAGCTAATCCGTCTGGGATAGANATGAGGAGTATGCAAGTGGTGGAAGGCCCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAA CAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCNTGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGT GATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCT CTGCGGTTCTGCCTTCTGTTCCTCTGTTTATTTGTTAATTAGAA CTAAAACTAGCTTCCACATGTGCATGATAGAAAATGTGATTCTTAGTTCAGTTCTAATTTGAAC AGTT CTGTGAAAAA ]
[-] EMBL CB629679 [ TGAGGAGTATG AAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAA CAAAGAAGAAAGTCGGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTGTTCGCTCTTCTGGGTGTCAGGATATACTTTACTGGGCAAGAGGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGT GATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTCCTGCGGTTCTCCCTTCTGTTCCTCTGTTTATTGGTTAATTAGAAGGTAAAACTAGCTTCCACATGTGCATGATAGAAAATGGGATTCTTAGTTCAGTTCTAATTTGAACGAGTT TTGAGGGAAATATTT ]
[-] EMBL CF327551 [ AGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGTAGATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTCCTGCGGTTCTGCCTTCTGTTCCTCTGTTTATTTGTTAATTAGAA CTAAAACTAGCTTCCACATGTGCATGATAGAAAATGTGATTCTTAGTTCAGTTCTAATTTGAAC AGTT CTGTGAAAAATATTTTTGTTGTCCAACTATTGCCAAAACGTTTGTACAAGTGATACAATAGTAATAAGGCGTGTATATCTGGAGCGAGGTTTTGTTTACTGCTAGGCTTTTATTTATCACTGCTACCTTTGATAAAAAAAAAAA]
consensusID : consensus_14793#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 614 fasta sequence
[AATGAGGAGTATGAAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTTTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAACAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTTTTTTGTCAGCCTGAACTCGCTATACATTTTTATATGTGTTTTCGCTCTTTTTGGGGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGGTATCCCCCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGTGATGCAATCCTGAAGGGCCTGGTTTTATTGGTTGATTTTGACATTATTGTATTTCTGTCGGCAATTATTTAGTTGTGCCTTGTGCAGTTGTGCTTTCCTGCGGTTTTGCCTTTTGTTCCTTTGTTTATTTGTTAATTAGAACTAAAACTAGCTTCCACATGTGCATGATAGAAAAAGGGATTTTTAGTTCAGTTTTAATTTGAACAGTTCTGTGAAAAATATTTTTGTTGTCCAACTATTGCCAAAAAAGGGGTACAAGTGATACAAT]
[-] EMBL CB669217 [AATGAGGAGTATGAAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTTTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAACAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTTTTTTGTCAGCCTGAACTCGCTATACATTTTTATATGTGTTTTCGCTCTTTTTGGGGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGGTATCCCCCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGTGATGCAATCCTGAAGGGCCTGGTTTTATTGGTTGATTTTGACATTATTGTATTTCTGTCGGCAATTATTTAGTTGTGCCTTGTGCAGTTGTGCTTTCCTGCGGTTTTGCCTTTTGTTCCTTTGTTTATTTGTTAATTAGAACTAAAACTAGCTTCCACATGTGCATGATAGAAAAAGGGATTTTTAGTTCAGTTTTAATTTGAACAGTTCTGTGAAAAATATTTTTGTTGTCCAACTATTGCCAAAAAAGGGGTACAAGTGATACAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14793#0 TGGGCGTCAGGACCACTCCCTTCCGGCGCGGCGGAGATCGGAATCGGCGGCGATGGCGGC 60
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 GACGACGACGAGACCCCTCCCCCTCCTCCTCCTGCTGCTTCTGCCTCCTCTCCTCCTCCT 120
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 GCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCG 180
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 GGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTT 240
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 CGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGA 300
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 AGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGA 360
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 CAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTT 420
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 TATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAAAAGCTGACTTGCTTGTCCGCAA 480
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 TCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAG 540
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 CTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGTTCATTGGGTTTGGGGTGAATGAGTC 600
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 GTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGA 660
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 TTTTTCTGAGGACTTCATGGTCACTTATGATTTTGATAAGGTTCCTGCATTGGTTTCACT 720
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 TCATCCAAAGTACAAAGAACAAAGTGTATTTTATGGCCCATTTGAAGGAAGTTTCTTGGA 780
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 AGATTTTATACGGCAATCCCTGCTTCCTTTGACTGTCCCCATCAACACAGAGACACTCAA 840
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 AATGTTGGATGATGATGACAGAAAAGTTGTTCTTGCAATTTTGGAGGATGATTCAGATGA 900
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 AACTTCTTCACAGTTGGTAAAAGTTTTGAGGTCTGCTGCCAATGCAAACCGTGACTTGGT 960
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 GTTTGGGTATGTCGGAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGATATTTCCAA 1020
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 GAGCTCACAGCTGCCAAAGCTAATCGTCTGGGATAGAAATGAGGAGTATGAAGTGGTGGA 1080
consensus_14793#1 -------------------------------------AATGAGGAGTATGAAGTGGTGGA 23
***********************
consensus_14793#0 AGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGG 1140
consensus_14793#1 AGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTTTCAAATAAGCCAATTCCTTGAGGG 83
*********************************** ************************
consensus_14793#0 ATATAGAGCAGGAAGAACAACAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCT 1200
consensus_14793#1 ATATAGAGCAGGAAGAACAACAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCT 143
************************************************************
consensus_14793#0 GAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGG 1260
consensus_14793#1 GAACTTTTTTGTCAGCCTGAACTCGCTATACATTTTTATATGTGTTTTCGCTCTTTTTGG 203
***** * ************************** ********** ********* ****
consensus_14793#0 TGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGA 1320
consensus_14793#1 GGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGA 263
***********************************************************
consensus_14793#0 GTGAAAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGA 1380
consensus_14793#1 GTGAAAGAAGCTTACCAAAAGAGGGTATCCCCCAAGAGATACATATATATATAGTTCAGA 323
************************ ***** *****************************
consensus_14793#0 GGTCAGGTTTCAAACTTCCAAGTGATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATT 1440
consensus_14793#1 GGTCAGGTTTCAAACTTCCAAGTGATGCAATCCTGAAGGGCCTGGTTTTATTGGTTGATT 383
*************************************** ********************
consensus_14793#0 CTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTC 1500
consensus_14793#1 TTGACATTATTGTATTTCTGTCGGCAATTATTTAGTTGTGCCTTGTGCAGTTGTGCTTTC 443
************** *************** ************************* **
consensus_14793#0 CTGCGGTTCTGCCTTCTGTTCCTCTGTTTATTTGTTAATTAGAACTAAAACTAGCTTCCA 1560
consensus_14793#1 CTGCGGTTTTGCCTTTTGTTCCTTTGTTTATTTGTTAATTAGAACTAAAACTAGCTTCCA 503
******** ****** ******* ************************************
consensus_14793#0 CATGTGCATGATAGAAAATGTGATTCTTAGTTCAGTTCTAATTTGAACAGTTCTGTGAAA 1620
consensus_14793#1 CATGTGCATGATAGAAAAAGGGATTTTTAGTTCAGTTTTAATTTGAACAGTTCTGTGAAA 563
****************** * **** *********** **********************
consensus_14793#0 AATATTTTTGTTGTCCAACTATTGCCAAAACGTTTGTAAAAAAAAAAAAAAGGTAATAAG 1680
consensus_14793#1 AATATTTTTGTTGTCCAACTATTGCCAAAAAAGGGGTACAAGTGATACAAT--------- 614
****************************** *** ** * * **
consensus_14793#0 GCGTGTATATCTGGAGCGAGGTTTTGTTTACTGCTAGGCTTTTATTTATCACTGCTACCT 1740
consensus_14793#1 ------------------------------------------------------------
consensus_14793#0 TTGATAAAAAAAAAAA 1756
consensus_14793#1 ----------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||