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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14804#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1835 fasta sequence
[AAATCTTGCAACTATTTCACAGTTTAATTCATTAACACCACATATATAAGAAATCTCTTGATTGATTTAGCATTGCTAAGTAGTATAATTAACAGGGAGCTTAGTGAGCTTGCTGTGAAATTGCAAGGCTCTTGTTGTTCTTGGCGAGTGTGGCTAGCTACTGCTTGCTGCTGCCGCGGTTGAGCATCTCCTTGTAGTTGAGCAGCGAGTTGAGCCTCTGAAGCTGCAGTTGCTGCCTGAATTTGTTGATGAAGTCGTCGGCTCTGGCGTCCACGCCGCCGTCGTCGGCGTCCTCCGCCGCCGTGTCCTTCCTCGCCTCCGAGCTCGACTTGGTCATCGTCTTCGCCTCCGACGCCGCCTGCTTCTTCGCCTTCTTGTCCTGCTCCCGCGCCGGCTCCGACCGGGTCCTACCGTAGTGCGCTTGTGCGGGCGTTGCCGCCGCCGCTGCGTCGGCGGGGATGTCGTCGGTGGCGAGGTCGCCGGAGCGGAAGCTGTAGAGGGTGAACGAGCGGAGGCGGTCCAGGACGGACGACGTGCGCGCGAGCGGCGCCGGCGCCGGCG-CCGGGGGAGGAACGTATTCTTGCTGGAGCGGCAGATCTCGCTGCTGCTTCGGTGTGAAATCGTCTTCGGCCGTCGCGTCCACGGCGGCCGCGGCCTCCTCCGGGAACGCCTCGACCACCCTCGCCGGAGCCCTCACGACCTCTGCCCTCCTCACCTCGGAGCTCGAGTTCCTCAGCCTCGACGCCGCCTTCCTCTCCTCCTGCGCCGGCGCCGCCGCCGGCTCCGACCGGC-TCCTCGCGTAGTGCCCTTGCAGCTTCACCTCATCCACCGGAGACGAAGACACCACCT-CCTCCGTGCGCTGGTGGTGGAGTT-GGCTCG-TCGCCG-CCGCCGC-AGCAGT-AGCGTAC-TCGGGAGGGAAGTCACCGG-AGCGGAAGCGGTAGAGTCCGAACGAGCGGAGCCGGTCAAGAACGGACGACGTCCGCGCGAGCGGCGCCGGCGCCGGCGG-CGG-AGCATACAGCGTCTCCTGCATCATCATCTGCTGGTGCTCACCGCCGCCGT-AGTATTGCTGATGC-AGCAGCGGCGGCGGCGGTTGCAACTGGTCGTGGTGGAGTATCTCCCCGTCGTGGTGATACTGGTACACCTGCCGCCGGCGGCGCTGGTGCGTGCGGGAGGTGAGCGCGATGGTGCCGATGACGATGTTCACGACGAGGAACAGCGTCGCCGGCGTGAAGTACCCGCGGATCGCCGCCCACGCGCCCACCCCCGGCGACGCCGCCTCCGCCACGTCCATCTATCACGCGGAGGCTAGCAGGGGAAAGCGCGGAAACGGACGACGCGGGCGAGAGCTCGGTGAGCGGCTGTGGTGTACAGGTGGGGATTAGCGTTTTTGGGGCGGTGTACGGGGGTTTGTGTGGGTTGGCTAGCACGAGGGCGTCGCGGAGGCGAGCGGTTAAAATGACGGGCGAGGCGAGGCGGGCGGGGGCGACACGCGGCGAGGCGGGGTGGGAGATGGCTGACTTGGTGGGTGGAAAACGTGGGAATCCAAGCTGCCGCCCAAGCAGGCAAGCAGCAGCAGCGCGGGGAGCCGACCCGCCGGGATTGCAGCTGCTGCATCTGCATGGCATCTTCCGCCAAAAAAAAGACGGCCTACGACGCGTACGCTGACACTGTAGTATGTGGTGGACTGGAGTACAAGTCACTGTTGCTACTCGGCTACTCCAGCCGTCCTATGGCACGTGCATATACAGTGGTATGTACAGTTGACATTTTTCCATGGAGCACACGACAGAATAATGATACTACGAGTACATGCGTACATGAGATGCTACAATATACTC]
[-] EMBL AK072284 [AAATCTTGCAACTATTTCACAGTTTAATTCATTAACACCACATATATAAGAAATCTCTTGATTGATTTAGCATTGCTAAGTAGTATAATTAACAGGGAGCTTAGTGAGCTTGCTGTGAAATTGCAAGGCTCTTGTTGTTCTTGGCGAGTGTGGCTAGCTACTGCTTGCTGCTGCCGCGGCTGAGCATCTCCTTGTAGTTGAGCAGCGAGTTGAGCCTCTGAAGCTGCAGTTGCTGCCTGAATTTGTTGATGAAGTCGTCGGCTCTGGCGTCCACGCCGCCGTCGTCGGCGTCCTCCGCCGCCGTGTCCTTCCTCGCCTCCGAGCTCGACTTGGTCATCGTCTTCGCCTCCGACGCCGCCTGCTTCTTCGCCTTCTTGTCCTGCTCCCGCGCCGGCTCCGACCGGGTCCTACCGTAGTGCGCTTGTGCGGGCGTTGCCGCCGCCGCTGCGTCGGCGGGGATGTCGTCGGTGGCGAGGTCGCCGGAGCGGAAGCTGTAGAGGGTGAACGAGCGGAGGCGGTCCAGGACGGACGACGTGCGCGCGAGCGGCGCCGGCGCCGGCG CCGGGGGAGGAACGTATTCTTGCTGGAGCGGCAGATCTCGCTGCTGCTTCGGTGTGAAATCGTCTTCGGCCGTCGCGTCCACGGCGGCCGCGGCCTCCTCCGGGAACGCCTCGACCACCCTCGCCGGAGCCCTCACGACCTCTGCCCTCCTCACCTCGGAGCTCGAGTTCCTCAGCCTCGACGCCGCCTTCCTCTCCTCCTGCGCCGGCGCCGCCGCCGGCTCCGACCGGC TCCTCGCGTAGTGCCCTTGCAGCTTCACCTCATCCACCGGAGACGAAGACACCACCT CCTCCGTGCGCTGGTGGTGGAGTT GGCTCG TCGCCG CCGCCGC AGCAGT AGCGTAC TCGGGAGGGAAGTCACCGG AGCGGAAGCGGTAGAGTCCGAACGAGCGGAGCCGGTCAAGAACGGACGACGTCCGCGCGAGCGGCGCCGGCGCCGGCGG CGG AGCATACAGCGTCTCCTGCATCATCATCTGCTGGTGCTCACCGCCGCCGT AGTATTGCTGATGC AGCAGCGGCGGCGGCGGTTGCAACTGGTCGTGGTGGAGTATCTCCCCGTCGTGGTGATACTGGTACACCTGCCGCCGGCGGCGCTGGTGCGTGCGGGAGGTGAGCGCGATGGTGCCGATGACGATGTTCACGACGAGGAACAGCGTCGCCGGCGTGAAGTACCCGCGGATCGCCGCCCACGCGCCCACCCCCGGCGACGCCGCCTCCGCCACGTCCATCTATCACGCGGAGGCTAGCAGGGGAAAGCGCGGAAACGGACGACGCGGGCGAGAGCTCGGTGAGCGGCTGTGGTGTACAGG ]
[-] EMBL AK060489 [ CACAGTTTAATTCATTAACACCACATATATAAGAAATCTCTTGATTGATTTAGCATTGCTAAGTAGTATAATTAACAGGGAGCTTAGTGAGCTTGCTGTGAAATTGCAAGGCTCTTGTTGTTCTTGGCGAGTGTGGCTAGCTACTGCTTGCTGCTGCCGCGGTTGAGCATCTCCTTGTAGTTGAGCAGCGAGTTGAGCCTCTGAAGCTGCAGTTGCTGCCTGAATTTGTTGATGAAGTCGTCGGCTCTGGCGTCCACGCCGCCGTCGTCGGCGTCCTCCGCCGCCGTGTCCTTCCTCGCCTCCGAGCTCGACTTGGTCATCGTCTTCGCCTCCGACGCCGCCTGCTTCTTCGCCTTCTTGTCCTGCTCCCGCGCCGGCTCCGACCGGGTCCTACCGTAGTGCGCTTGTGCGGGCGTTGCCGCCGCCGCTGCGTCGGCGGGGATGTCGTCGGTGGCGAGGTCGCCGGAGCGGAAGCTGTAGAGGGTGAACGAGCGGAGGCGGTCCAGGACGGACGACGTGCGCGCGAGCGGCGCCGGCGCCGGCG CCGGGGGAGGAACGTATTCTTGCTGGAGCGGCAGATCTCGCTGCTGCTTCGGTGTGAAATCGTCTTCGGCCGTCGCGTCCACGGCGGCCGCGGCCTCCTCCGGGAACGCCTCGACCACCCTCGCCGGAGCCCTCACGACCTCTGCCCTCCTCACCTCGGAGCTCGAGTTCCTCAGCCTCGACGCCGCCTTCCTCTCCTCCTGCGCCGGCGCCGCCGCCGGCTCCGACCGGC TCCTCGCGTAGTGCCCTTGCAGCTTCACCTCATCCACCGGAGACGAAGACACCACCT CCTCCGTGCGCTGGTGGTGGAGTT GGCTCG TCGCCG CCGCCGC AGCAGT AGCGTAC TCGGGAGGGAAGTCACCGG AGCGGAAGCGGTAGAGTCCGAACGAGCGGAGCCGGTCAAGAACGGACGACGTCCGCGCGAGCGGCGCCGGCGCCGGCGG CGG AGCATACAGCGTCTCCTGCATCATCATCTGCTGGTGCTCACCGCCGCCGT AGTATTGCTGATGC AGCAGCGGCGGCGGCGGTTGCAACTGGTCGTGGTGGAGTATCTCCCCGTCGTGGTGATACTGGTACACCTGCCGCCGGCGGCGCTGGTGCGTGCGGGAGGTGAGCGCGATGGTGCCGATGACGATGTTCACGACGAGGAACAGCGTCGCCGGCGTGAAGTACCCGCGGATCGCCGCCCACGCGCCCACCCCCGGCGACGCCGCCTCCGCCACGTCCATCTATCACGCGGAGGCTAGCAGGGGAAAGCGCGGAAACGGACGACGCGGGCGAGAGCTCGG ]
[-] EMBL AU101356 [ tttttTATAAGAAATCTCTTGATTGATTTAGCATTGCTAAGTAGTATAATTAACAGGGAGCTTAGTGAGCTTGCTGTGAAATTGCAAGGCTCTTGTTGTTCTTGGCGAGTGTGGCTAGCTACTGCTTGCTGCTGCCGCGGTTGAGCATCTCCTTGTAGTTGAGCAGCGAGTTGAGCCTCTGAAGCTGCAGTTGCTGCCTGAATTTGTTGATGAAGTCGTCGGCTCTGGCGTCCACGCCGCCGTCGTCGGCGTCCTCCGCCGCCGTGTCCTTCCTCGCCTCCGAGCTCGACTTGGTCATCGTCTTCGCCTCCGACGCCGCCTGCTTCTTCGCCTTCTTGTCCTGCTCCCGCGCCGGCTCCGACCGGGTCCTACCGTAGTGCGCTTGTGCGGGCGTTGCCGCCGCCGCTGCGTCGGCGGGGATGTCGTCGGTGGCGAGGTCGCCGGAGCGGAAGCTGTAGAGGGTGAACGAGCGGAGGCGGTCCAGGACGGACGACGTGCGCGCGAGCGGCGCCGGCGCCGGCGCCCGGGGGAGGAACGTA TCTTGCTGGAGCGGCAGATCg ]
[+] EMBL AK106948 [ TAGTATATTTAACAGGGAGCTTAGTGAGCTTGCTGTGAAATTGCAAGGCTCTTGTTGTTCTTGGCGAGTGTGGCTAGCTACTGCTTGCTGCTGCCGCGGTTGAGCATCTCCTTGTAGTTGAGCAGCGAGTTGAGCCTCTGAAGCTGCAGTTGCTGCCTGAATTTGTTGATGAAGTCGTCGGCTCTGGCGTCCACGCCGCCGTCGTCGGCGTCCTCCGCCGCCGTGTCCTTCCTCGCCTCCGAGCTCGACTTGGTCATCGTCTTCGCCTCCGACGCCGCCTGCTTCTTCGCCTTCTTGTCCTGCTCCCGCGCCGGCTCCGACCGGGTCCTACCGTAGTGCGCTTGTGCGGGCGTTGCCGCCGCCGCTGCGTCGGCGGGGATGTCGTCGGTGGCGAGGTCGCCGGAGCGGAAGCTGTAGAGGGTGAACGAGCGGAGGCGGTCCAGGACGGACGACGTGCGCGCGAGCGGCGCCGGCGCCGGCG CCGGGGGAGGAACGTATTCTTGCTGGAGCGGCAGATCTCGCTGCTGCTTCGGTGTGAAATCGTCTTCGGCCGTCGCGTCCACGGCGGCCGCGGCCTCCTCCGGGAACGCCTCGACCACCCTCGCCGGAGCCCTCACGACCTCTGCCCTCCTCACCTCGGAGCTCGAGTTCCTCAGCCTCGACGCCGCCTTCCTCTCCTCCTGCGCCGGCGCCGCCGCCGGCTCCGACCGGC TCCTCGCGTAGTGCCCTTGCAGCTTCACCTCATCCACCGGAGACGAAGACACCACCT CCTCCGTGCGCTGGTGGTGGAGTT GGCTCG TCGCCG CCGCCGC AGCAGT AGCGTAC TCGGGAGGGAAGTCACCGG AGCGGAAGCGGTAGAGTCCGAACGAGCGGAGCCGGTCAAGAACGGACGACGTCCGCGCGAGCGGCGCCGGCGCCGGCGG CGG AGCATACAGCGTCTCCTGCATCATCATCTGCTGGTGCTCACCGCCGCCGT AGTATTGCTGATGC AGCAGCGGCGGCGGCGGTTGCAACTGGTCGTGGTGGAGTATCTCCCCGTCGTGGTGATACTGGTACACCTGCCGCCGGCGGCGCTGGTGCGTGCGGGAGGTGAGCGCGATGGTGCCGATGACGATGTTCACGACGAGGAACAGCGTCGCCGGCGTGAAGTACCCGCGGATCGCCGCCCACGCGCCCACCCCCGGCGACGCCGCCTCCGCCACGTCCATCTATCACGCGGAGGCTAGCAGGGGAAAGCGCGGAAACGGACGACGCGGGCGAGAGCTCGGTGAGCGGCTGTGGTGTACAGGTGGGGATTAGCGTTTTTGGGGCGGTGTACGGGGGTTTGTGTGGGTTGGCTAGCACGAGGGCGTCGCGGAGGCGAGCGGTTAAAATGACGGGCGAGGCGAGGCGGGCGGGGGCGACACGCGGCGAGGCGGGGTGGGAGATGGCTGACTTGGTGGGTGGAAAACGTGGGAATCCAAGCTGCCGCCCAAGCAGGCAAGCAGCAGCAGCGCGGGGAGCCGACCCGCCGGGATTGCAGCTGCTGCATCTGCATGGCATCTTCCGCCAAAAAAAAGACGGCCTACGACGCGTACGCTGACACTGTAGTATGTGGTGGACTGGAGTACAAGTCACTGTTGCTACTCGGCTACTCCAGCCGTCCTATGGCACGTGCATATACAGTGGTATGTACAGTTGACATTTTTCCATGGAGCACACGACAGAATAATGATACTACGAGTACATGCGTACATGAGATGCTACAATATACTC]
[-] EMBL AU182649 [ GCTGCCGCGGTTGAGCATCTCCTTGTAGTTGAGCAGCGAGTTGAGCCTCTGAAGCTGCAGTTGCTGCCTGAATTTGTTGATGAAGTCGTCGGCTCTGGCGTCCACGCCGCCGTCGTCGGCGTCCTCCGCCGCCGTGTCCTTCCTCGCCTCCGAGCTCGACTTGGTCATCGTCTTCGCCTCCGACGCCGCCTGCTTCTTCGCCTTCTTGTCCTGCTCCCGCGCCGGCTCCGACCGGGTCCTACCGTAGTGCGCTTGTGCGGGCGTTGCCGCCGCCGCTGCGTCGGCGGGGATGTCGTCGGTGGCGAGGTCGCCGGAGCGGAAGCTGTAGAGGGTGAACGAGCGGAGGCGGTCCAGGACGGACGACGTGCGCGCGAGCGGCGCCGGCGCCGGCG CCGGGGGAGGAACGTATTCTTGCTGGA ]
[-] EMBL AU082678 [ CCTCCGGGAACGCCTCGACCACCCTCGCCGGAGCCCTCACGACCTCTGCCCTCCTCACCTCGGAGCTCGAGTTCCTCAGCCTCGACGCCGCCTTCCTCTCCTCCTGCGCCGGCGCCGCCGCCGGCTCCGACCGGC TCCTCGCGTAGTGCCCTTGCAGCTTCACCTCATCCACCGGAGACGAAGACACCACCT CCTCCGTGCGCTGGTGGTGGAGTT GGCTCG TCGCCG CCGCCGC AGCAGT AGCGTAC TCGGGAGGGAAGTCACCGG AGCGGAAGCGGTAGAGTCCGAACGAGCGGAGCCGGTCAAGAACGGACGACGTCCGCGCGAG GGCGCCGGCGCCGGCGG CGG AGCATACAGCGTCTCCTGCATCATCATgc ]
[-] EMBL CA754560 [ CGGCTTCCTCGCGTAGTGCCCTTGCAGCTTCACCTCATCCACCGGAGACGAAGACACCACTTCCCTCCGTGCGCTGGTGGTGGAGTT GGCTCG TCGCCG CCGCCGC AGCAGT AGCGTAC TCGGGAGGGAAGTCACCGG AGCGGAAGCGGTAGAGTCCGAACGAGCGGAGCCGGTCAAGAACGGACGACGTCCGCGCGAGCGGCGCCGGCGCCGCCGGCCGG AGC TACAGCGTCTCCTGCATCATCATCTGCTGGTGCTCACCGCCGCCGT AGTATTGCTGATGC AGCAGCGGCGGCGGCGGTTGCAACTGGTCGTGGTGGAGTATCTCCCCGTCGTGGTGATACTGGTACACCTGCCGCCGGCGGCGCTGGTGCGTGCGGGAGGTGAGCGCGATGGTGCCGATGACGATGTTCACGACGAGGAACAGCGTCGCCGGCGTGAAGTACCCGCGGATCGCCGCCCACGCGCCCACCCCCGGCGACGCCGCCTCCGCCACGTCCATCTATCACGCGGAGGCTAGCAGGGGAAAGCGCGGAAACGGACGACGCGGGCGAGAGCTCGGTGAGCGGCTGTGGTGTACAGGTGGGGATTAGCGTTTTTGGGGCGGTGTAC ]
[-] EMBL CB646295 [ GGC TCCTCGTGTAGTGCCCTTGCAGCTTCACCTCATCCACCGGAGACGAAGACACCACCT CCTCCGTGCGCTGGTGGTGGAGTT GGCTCG TCGCCG CCGCCGC AGCAGT AGCGTAC TCGGGAGGGAAGTCCCCGG AGCGGAAGCGGTAGAGTCCGAACGAGCGGAGCCGGTCAAGAACGGACGACGTCCGCGCGAGCGGCGCCGGCGCCGGCGG CGG AGCATACAGCGTCTCCTGCATCATCATCTGCTGGTGCTCACCGCCGCCGT AGTATTGCTGATGC AGCAGCGGCGGCGGCGGTTGCAACTGGTCGTGGTGGAGTATCTCCCCGTCGTGGTGATACTGGTACACCTGCCGCCGGCGGCGCTGGTGCGTGCGGGAGGTGAGCGCGATGGTGCCGATGACGATGTTCACGACGAGGAACAGCGTCGCCGGCGTGAAGTACCCGCGGATCGCCGCCCACGCGCCCACCCCCGGCGACGCCGCCTCCGCCACGTCCATCTATCACGCGGAGGCTAGCAGGGGAAAGCGCGGAAACGGACGACGCGGGCGAGAGCTCGGTGAGCGGCTGTGGTGTACAGGTGGGGATTAGCGTTTTTGGGGCGGTGTACG ]
[-] EMBL BE230571 [ aaAGTTGGGCTCGTTCGCCGCCCGCCGCAACCAGTAAGCGTACTTCGGAAGGAAAGTCACCGGAAGCGGAAGCGGTAGAGTCCGAACGAGCGGAGCCGGTCAAGAACGGACGACGTCCGCGCGAGCGGCGCCGGCGCCGGCGG CGG AGCATACAGCGTCTCCTGCATCATCATCTGCTGGTGCTCACCGCCGCCGT AGTATTGCTGATGC AGCAGCGGCGGCGGCGGTTGCAACTGGTCGTGGTGGAGTATCTCCCCGTCGTGGTGATACTGGTACACCTGCCGCCGGCGGCGCTGGTGCGTGCGGGAGGTGAGCGCGATGGTGCCGATGACGATGTTCACGACGAGGAACAGCGTCGCCGGCGTGAAGTACCCGCGGATCGCCGCCCACGCGCCCACCCCTGGCGACGCCGCCTCCGCCACGTCCATCTATCACGCGGAGGCTAGCAGGGGAAAGCGCGGAAACGGACGACGCGGGCGAGAGCTCGGTGAGCGGCTGTGGTGTACAGGTGGGGATTAGCGTTTTTGGGGC ]
[-] EMBL CB682222 [ AGCGGAGCCCATCAAGAGCGGCAGCCGTCCGCGAGAGCGGCTCCGGCGCCGGCGG CGG AGCATACAGCGTCTCCTGCATCATCATCTGCTGGTGCTCACCGCCGCCGT AGTATTGCTGATGC AGCAGCGGCGGCGGCGGTTGCAACTGGTCGTGGTGGAGTATCTCCCCGTCGTGGTGATACTGGTACACCTGCCGCCGGCGGCGCTGGTGCGTGCGGGAGGTGAGCGCGATGGTGCCGATGACGATGTTCACGACGAGGAACAGCGTCGCCGGCGTGAAGTACCCGCGGATCGCCGCCCACGCGCCCACCCCCGGCGACGCCGCCTCCGCCACGTCCATCTATCACGCGGAGGCTAGCAGGGGAAAGCGCGGAAACGGACGACGCGGGCGAGAGCTCGGTGAGCGGCTGTGGTGTACAGGTGGGGATTAGCGTTTTTGGGGCGGT ]
[-] EMBL OSC215 [ gcCCGGCNG CGGAAGCATACAACGTCTCCTGCATCATCA TGCTGNTGCTAACCGCCGCCGTAAGTATTGCTGATGCAAGCANCGGCGGCGNCGGTTGCAACTGGTCGTGGTGAAGTATCTCCCCGTCGTGGTGATACTGGTACACCTGCC CCGGCGGCGCTGGTGCGTGCGGGAGGTGAGCGCGATGGTGCCGATGACGATGTTCACGACGAGGAACAGCGTCGCCGGCGTGAAGTACCCGCGGATCGCCGCCCACGCGCCCACCCCC GCGACGCCGCCTCCGCCACGTCCATCTATCACGCGGAGGCTAGCAGGGGAAAGCGCGGAAACGGACGACGCGGGCGAGAGCTCGGTGAGCGGCTGTGGTGTACAGGTGGGGATTAGCGTTTTTGGGGCGGTGTACGG ]
consensusID : consensus_14804#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 467 fasta sequence
[CCTCCGGGAACGCCTCGACCACCCTCACGAGAACCTCACGACCTCGACGCTCCTCACCTCGGACGCCGAGTTCCTGCAGCCTCGACGCCGCCTTCCTCTCCTCCTGCGCCTGGCGGCGGAGCATACAGCGTATCCTGCATCATCATCTGTTAGGTGCTCACCGCCGCCAGTAATACTCGTTGATAGCAACAGATGGTGGCGGAGAGTTAGCAATGGGTCAGTGGTAGGATTATCTCCCCGGTGGTGGTTGATACTGGTACATGCTGACGCACGGAGGCAGCTGGTGCGTGCTGGGAGGTAGAAGCAGCGATGGTGCCCGAGAGACGAGAGTTCACGACGGAGGAACGAGTGTCCCCAGGTGTGAGGGTACCCGCAGGATCGCCGGCCACAGCGCGCACCCGCTGCTGACGACCGTCTCCGTCACGTGCATCTATTCACGCGGAGGCTATCGGGGGGCAAAGCTGCGG]
[+] EMBL CB965530 [CCTCCGGGAACGCCTCGACCACCCTCACGAGAACCTCACGACCTCGACGCTCCTCACCTCGGACGCCGAGTTCCTGCAGCCTCGACGCCGCCTTCCTCTCCTCCTGCGCCTGGCGGCGGAGCATACAGCGTATCCTGCATCATCATCTGTTAGGTGCTCACCGCCGCCAGTAATACTCGTTGATAGCAACAGATGGTGGCGGAGAGTTAGCAATGGGTCAGTGGTAGGATTATCTCCCCGGTGGTGGTTGATACTGGTACATGCTGACGCACGGAGGCAGCTGGTGCGTGCTGGGAGGTAGAAGCAGCGATGGTGCCCGAGAGACGAGAGTTCACGACGGAGGAACGAGTGTCCCCAGGTGTGAGGGTACCCGCAGGATCGCCGGCCACAGCGCGCACCCGCTGCTGACGACCGTCTCCGTCACGTGCATCTATTCACGCGGAGGCTATCGGGGGGCAAAGCTGCGG]
consensusID : consensus_14804#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 463 fasta sequence
[CTCACTAAAGGGAATAAGC-TGGGCCGCGG-CTCCTCCGGGAACGCCTCGACCACCCTCGCCGGAGCCCTCACGACCTCTGCCCTCCTCACCTCGGAGCTCGAGTTCCTCAGCCTCGACGCCGCCTTCCTCTCCTCCTGCGCCGGCGGCGGAGCATACAGCGTCTCCTGCATCATCATCTGCTGGTGCTCACCGCCGCCGTAGTATTGCTGATGCAGCAGCGGCGGCGGCGGTTGCAACTGGTCGTGGTGG-AGT-ATCTCCCCGTCGTGGTGATACTGGTACACCTGCCGCCGGCGGCGCTGGTGCGTGCGGG-AGGTGAGCGCGATGGTGCCGATGACGATGTTCACGACGAGGAACAGCGTCGCCGGCGTGAAGTACCCGCGGATCGCCGCCCACGCGCCCACCCCTGGCGACGCCGCCTCCGCCACGTCCATCTATCACGCGGAGGCTAGCAGGGGAAAGCGCG]
[+] EMBL BU673218 [CTCACTAAAGGGAAT AGC TGGGCCGCGG CTCCTCCGGGAACGCCTCGACCACCCTCGCCGGAGCCCTCACGACCTCTGCCCTCCTCACCTCGGAGCTCGAGTTCCTCAGCCTCGACGCCGCCTTCCTCTCCTCCTGCGCCGGCGGCGGAGCATACAGCGTCTCCTGCATCATCATCTGCTGGTGCTCACCGCCGCCGTAGTATTGCTGATGCAGCAGCGGCGGCGGCGGTTGCAACTGGTCGTGGTGG AGT ATCTCCCCGTCGTGGTGATACTGGTACACCTGCCGCCGGCGGCGCTGGTGCGTGCGGG AGGTGAGCGCGATGGTGCCGATGACGATGTTCACGACGAGGAACAGCGTCGCCGGCGTGAAGTACCCGCGGATCGCCGCCCACGCGCCCACCCCTGGCGACGCCGCCTCCGCCACGTCCATCTATCACGCGGAGGCTAGCAGGG ]
[+] EMBL BI305670 [ AGGGAATAAGCTTGGGCCGCGGCCTCCTCCGGGAACGCCTCGACCACCCTCGCCGGAGCCCTCACGACCTCTGCCCTCCTCACCTCGGAGCTCGAGTTCCTCAGCCTCGACGCCGCCTTCCTCTCCTCCTGCGCCGGCGGCGGAGCATACAGCGTCTCCTGCATCATCATCTGCTGGTGCTCACCGCCGCCGTAGTATTGCTGATGCAGCAGCGGCGGCGGCGGTTGCAACTGGTCGTGGTGG AGT ATCTCCCCGTCGTGGTGATACTGGTACACCTGCCGCCGGCGGCGCTGGTGCGTGCGGG AGGTGAGCGCGATGGTGCCGATGACGATGTTCACGACGAGGAACAGCGTCGCCGGCGTGAAGTACCCGCGGATCGCCGCCCACGCGCCCACCCCTGGCGACGCCGCCTCCGCCACGTCCATCTATCACGCGGAGGCTAGCAGGGGAAAGCGCG]
[+] EMBL CB966688 [ GGGAATAAGC TGGG CGCGG CTCCTCCGGGAACGCCTCGACCACCCTCGCCGGAGCCCTCACGACCTCTGCCCTCCTCACCTCGGAGCTCGAGTTCCTCAGCCTCGACGCCGCCTTCCTCTCCTCCTGCGCCGGCGGCGGAGCATACAGCGTCTCCTGCATCATCATCTGCTGGTGCTCACCGCCGCCGTAGTATTGCTGATGCAGCAGCGGCGGCGGCGGTTGCAACTGGTCGTGGTGG AGT ATCTCCCCGTCGTGGTGATACTGGTACACCTGCCGCCGGCGGCGCTGGTGCGTGCGGG AGGTGAGCGCGATGGTGCCGATGACGATGTTCACGACGAGGAACAGCGTCGCCGGCGTGAAGTACCCGCGGATCGCCGCCCACGCGCCCACCCCTGGCGACGCCGCCTCCGCCACGTCCATCTATCACGCGGAGGCTAGCAGGG ]
[+] EMBL CB965394 [ CCTCCGGGAACGCCTCGACCACCCTCGCCGGAG CCTCACGACCTCTGCCCTCCTCACCTCGGAGC CGAGTTCCTCAGCCTCGACGCCGCCTTCCTCTCCTCCTGCGCCGGCGGCGGAGCATACCGCGTCTCCTGCCTCATCATCTGCTGGTGCTCACCGCCGCCGTCGTCTTGCTGCTGCAGCAGCGGCGGCGGCGGTTGCAACTGGTCGTGGTGGCAGTCATCTCCCCGTCGTGGTGCTACTGGTACACCTGCCGCCGGCGGCGCTGGTGCGTGCGGGCAGGTGCGCGCGCTGGTGCCGCTGCCGCTGTTCGCGCCGCGGCACGGCGTCGCCGGCGTGAAGTACCCGCGGATCGCCGCCCACGCGCCCACCCCTGGCGACGCCGCCTCCGCCACGTCCATCTATCACGCGGAGGCTAGCAGGG ]
[+] EMBL CB967034 [ CCTCCGGGAACGCCTCGACCACCCTCGCCGGAGCCCTCACGACCTCTGCCCTCCTCACCTCGGAGCTCGAGTTCCTCAGCCTCGACGCCGCCTTCCTCTCCTCCTGCGCCGGCGGCGGAGCATACAGCGTCTCCTGCATCATCATCTGCTGGTGCTCACCGCCGCCGTAGTATTGCTGATGCAGCAGCGGCGGCGGCGGTTGCAACTGGTCGTGGTGG AGT ATCTCCCCGTCGTGGTGATACTGGTACACCTGCCGCCGGCGGCGCTGGTGCGTGCGGG AGGTGAGCGCGATGGTGCCGATGACGATGTTCACGACGAGGAACAGCGTCGCCGGCGTGAAGTACCCGCGGATCGCCGCCCACGCGCCCACCCCTGGCGACGCCGCCTCCGCCACGTCCATCTATCACGCGGAGGCTAGCAGGG ]
[+] EMBL BI306192 [ CGGGAACGCCTCGACCACCCTCGCCGGAGCCCTCACGACCTCTGCCCTCCTCACCTCGGAGCTCGAGTTCCTCAGCCTCGACGCCGCCTTCCTCTCCTCCTGCGCCGGCGGCGGAGCATACAGCGTCTCCTGCATCATCATCTGCTGGTGCTCACCGCCGCCGTAGTATTGCTGATGCAGCAGCGGCGGCGGCGGTTGCAACTGGTCGTGGTGG AGT ATCTCCCCGTCGTGGTGATACTGGTACACCTGCCGCCGGCGGCGCTGGTGCGTGCGGG AGGTGAGCGCGATGGTGCCGATGACGATGTTCACGACGAGGAACAGCGTCGCCGGCGTGAAGTACCCGCGGATCGCCGCCCACGCGCCCACCCCTGGCGACGCCGCCTCCGCCACGTCCATCTATCACGCGGAGGCTAGCAGGGGAAAGCGCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 AAATCTTGCAACTATTTCACAGTTTAATTCATTAACACCACATATATAAGAAATCTCTTG 60
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 ATTGATTTAGCATTGCTAAGTAGTATAATTAACAGGGAGCTTAGTGAGCTTGCTGTGAAA 120
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 TTGCAAGGCTCTTGTTGTTCTTGGCGAGTGTGGCTAGCTACTGCTTGCTGCTGCCGCGGT 180
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 TGAGCATCTCCTTGTAGTTGAGCAGCGAGTTGAGCCTCTGAAGCTGCAGTTGCTGCCTGA 240
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 ATTTGTTGATGAAGTCGTCGGCTCTGGCGTCCACGCCGCCGTCGTCGGCGTCCTCCGCCG 300
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 CCGTGTCCTTCCTCGCCTCCGAGCTCGACTTGGTCATCGTCTTCGCCTCCGACGCCGCCT 360
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 GCTTCTTCGCCTTCTTGTCCTGCTCCCGCGCCGGCTCCGACCGGGTCCTACCGTAGTGCG 420
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 CTTGTGCGGGCGTTGCCGCCGCCGCTGCGTCGGCGGGGATGTCGTCGGTGGCGAGGTCGC 480
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 CGGAGCGGAAGCTGTAGAGGGTGAACGAGCGGAGGCGGTCCAGGACGGACGACGTGCGCG 540
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 CGAGCGGCGCCGGCGCCGGCGCCGGGGGAGGAACGTATTCTTGCTGGAGCGGCAGATCTC 600
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 GCTGCTGCTTCGGTGTGAAATCGTCTTCGGCCGTCGCGTCCACGGCGGCCGCGGCCTCCT 660
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 CCGGGAACGCCTCGACCACCCTCGCCGGAGCCCTCACGACCTCTGCCCTCCTCACCTCGG 720
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 AGCTCGAGTTCCTCAGCCTCGACGCCGCCTTCCTCTCCTCCTGCGCCGGCGCCGCCGCCG 780
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 GCTCCGACCGGCTCCTCGCGTAGTGCCCTTGCAGCTTCACCTCATCCACCGGAGACGAAG 840
consensus_14804#1 ---------------------------------------CCTCCGGGAACGCCTCGAC-- 19
consensus_14804#2 --------CTCACTAAAGGGAATAAGCTGGGCCGCGGCTCCTCCGGGAACGCCTCGAC-- 50
consensus_14804#0 ACACCACCTCCTCCGTGCGCTGGTGGTGGAGTTGGCTCGTCGCCGCCGCCGCAGCAGTAG 900
* *** *** *
consensus_14804#1 CACCCTCACGAGAACC-TCAC-GACCTCGACGCTCCTCACCTCGGACG--CCGAGTTCCT 75
consensus_14804#2 CACCCTCGCCGGAGCCCTCAC-GACCTCTGCCCTCCTCACCTCGGAGC--TCGAGTTCCT 107
consensus_14804#0 CGTACTCGGGAGGGAAGTCACCGGAGCGGAAGCGGTAGAGTCCGAACGAGCGGAGCCGGT 960
* *** * **** * * * ** * *** *
consensus_14804#1 GCAGCCTCGACGCCGCCTTCCT---CTCCTCCTGCGCCTGGCGGCGGAGCATACAGCGTA 132
consensus_14804#2 -CAGCCTCGACGCCGCCTTCCT---CTCCTCCTGCGCC-GGCGGCGGAGCATACAGCGTC 162
consensus_14804#0 CAAGAACGGACGACGTCCGCGCGAGCGGCGCCGGCGCC-GGCGGCGGAGCATACAGCGTC 1019
** **** ** * * * * ** ***** ********************
consensus_14804#1 TCCTGCATCATCATCTGTTAGGTGCTCACCGCCGCCAGTAATACTCGTTGATAGCAACAG 192
consensus_14804#2 TCCTGCATCATCATCTGCT-GGTGCTCACCGCCGCC-GTAGTATT-GCTGAT-GCAGCAG 218
consensus_14804#0 TCCTGCATCATCATCTGCT-GGTGCTCACCGCCGCC-GTAGTATT-GCTGAT-GCAGCAG 1075
***************** * **************** *** ** * * **** *** ***
consensus_14804#1 ATGGTGGCGGAGAGTTAGCAATGGGTCAGTGGTAGGATTATCTCCCCGGTGGTGGTTGAT 252
consensus_14804#2 -CGGCGGCGGCGGTT--GCAACTGGTC-GTGGT-GGAGTATCTCCCCG-TCGTGGT-GAT 271
consensus_14804#0 -CGGCGGCGGCGGTT--GCAACTGGTC-GTGGT-GGAGTATCTCCCCG-TCGTGGT-GAT 1128
** ***** * * **** **** ***** *** ********** * ***** ***
consensus_14804#1 ACTGGTACATGCTGACGCACGGAGGCAGCTGGTGCGTGCTGGGAGGTAGAAGCAGCGATG 312
consensus_14804#2 ACTGGTACAC-CTGCCGC-CGGCGGC-GCTGGTGCGTGC-GGGAGGTG--AGC-GCGATG 324
consensus_14804#0 ACTGGTACAC-CTGCCGC-CGGCGGC-GCTGGTGCGTGC-GGGAGGTG--AGC-GCGATG 1181
********* *** *** *** *** ************ ******* *** ******
consensus_14804#1 GTGCCCGAGAGACGAGAGTTCACGACGGAGGAACGAGTGTCCCCAGGTGTGAGGGTACCC 372
consensus_14804#2 GTGCC--GATGACGAT-GTTCACGACG-AGGAAC-AGCGTCGCC-GGCGTGAAG-TACCC 377
consensus_14804#0 GTGCC--GATGACGAT-GTTCACGACG-AGGAAC-AGCGTCGCC-GGCGTGAAG-TACCC 1234
***** ***** ********** ****** ** *** ** ** **** * *****
consensus_14804#1 GCAGGATCGCCGGCCACAGCGCGCACCCGCTGCTGACGACCGTCTCCGTCACGTGCATCT 432
consensus_14804#2 GC-GGATCGCCGCCCAC-GCGCCCACCC-CTGGCGACG-CCGCCTCCGCCACGTCCATCT 433
consensus_14804#0 GC-GGATCGCCGCCCAC-GCGCCCACCC-CCGGCGACG-CCGCCTCCGCCACGTCCATCT 1290
** ********* **** **** ***** * * **** *** ***** ***** *****
consensus_14804#1 ATTCACGCGGAGGCTATCGGGGGGCAAAGCTGCGG------------------------- 467
consensus_14804#2 AT-CACGCGGAGGCTAGCAGGGGAAAGCGCG----------------------------- 463
consensus_14804#0 AT-CACGCGGAGGCTAGCAGGGGAAAGCGCGGAAACGGACGACGCGGGCGAGAGCTCGGT 1349
** ************* * **** * **
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 GAGCGGCTGTGGTGTACAGGTGGGGATTAGCGTTTTTGGGGCGGTGTACGGGGGTTTGTG 1409
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 TGGGTTGGCTAGCACGAGGGCGTCGCGGAGGCGAGCGGTTAAAATGACGGGCGAGGCGAG 1469
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 GCGGGCGGGGGCGACACGCGGCGAGGCGGGGTGGGAGATGGCTGACTTGGTGGGTGGAAA 1529
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 ACGTGGGAATCCAAGCTGCCGCCCAAGCAGGCAAGCAGCAGCAGCGCGGGGAGCCGACCC 1589
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 GCCGGGATTGCAGCTGCTGCATCTGCATGGCATCTTCCGCCAAAAAAAAGACGGCCTACG 1649
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 ACGCGTACGCTGACACTGTAGTATGTGGTGGACTGGAGTACAAGTCACTGTTGCTACTCG 1709
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 GCTACTCCAGCCGTCCTATGGCACGTGCATATACAGTGGTATGTACAGTTGACATTTTTC 1769
consensus_14804#1 ------------------------------------------------------------
consensus_14804#2 ------------------------------------------------------------
consensus_14804#0 CATGGAGCACACGACAGAATAATGATACTACGAGTACATGCGTACATGAGATGCTACAAT 1829
consensus_14804#1 ------
consensus_14804#2 ------
consensus_14804#0 ATACTC 1835
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||