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Oryza sativa
cluster # 14808 cluster # 14808       Sequences # 18       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14808#0 length = 1729 sequences # 17  
consensus_14808#1 length = 631 sequences # 1  

consensusID : consensus_14808#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 1729
fasta sequence
                              [GGCGATGGGTGCCATCATCGCGGAGCTTTTTTCACTGCGACCTCTTTTCCCTGGTTCAAATGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTGGGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCATACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCTCTGCTCATGGGACCCACAAAGAAGGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTTTCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT-GGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT-GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG-AAGAGTTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT-CCTATCTTGCCTTGCATTGGCAT-CCAT-CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA-T-TACCACTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTAT-TAAAAAAAAAAAAAAAAAAATGTGCTGTTGCTGTTGCTATAAAATGTTGTGGAGAGCTGTGAACATGTCTGTCGTGAGTGACGATGATATTTTTTGCGAGTACCAAAGCGTAGTGCTGCTGCTGCTTTGCAGTTTGCGCAGAGCCTCTCTCTGGGCATGTTGTGGTTCAGTGCTCTCTCTGGGCATCATGTACCATCCAGTCAAGTATTCATGTACAGTAGCAATAACAGTATATGTATACATGTGTTCAT]

[+] EMBL AK069526             [GGCGATGGGTGCCATCATCGCGGAGCTTTTTTCACTGCGACCTCTTTTCCCTGGTTCAAATGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTGGGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCATACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCTCTGCTCATGGGACCCACAAAGAAGGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTTTCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT GGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGCGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA T TACCACTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCT                                                                                                                                                                                                                                                              ]
[+] EMBL CB681876             [GGCGATGGGTGCCATCATCGCGGAGCTTTTTTCACTGCGACCTCTTTTCCCTGGTTCAAATGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTGGGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCATACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCTCTGCTCATGGGACCCACAAAGAAGGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTTTCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB643218             [                                                                                                                                                                                                                                                                                                  ATCCCTTCTTTCAGCCATGCTTTTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT GGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB631837             [                                                                                                                                                                                                                                                                                                                       TCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT GGGGCCTTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACGACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB631881             [                                                                                                                                                                                                                                                                                                                                                       ACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT GGGGCCTTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACGACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB662473             [                                                                                                                                                                                                                                                                                                                                                                         ACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT GGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCTCCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB646494             [                                                                                                                                                                                                                                                                                                                                                                                            taAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGTGGGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AA754573             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ttnTTCTTGTCAGGCTCCAGAGGGTAACCATNAACTGACNCCNGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGA CAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGANAANCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCNTNTTGGANCCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACCATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCNACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU057460             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            cnTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATNGCGGAGAAGCTGTCTCAGCTGACAGTNGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACNCCNNCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACNACGATGAAACGGAAGCTGCCGCCACACNCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCGAAAGA TTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB683800             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGTATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA T TACCACTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAAAGGAATAATAATAATAAATATATACTATTGCTATCTAAAAAga                                                                                                                                                                                                                                                   ]
[-] EMBL CA761639             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACCCCTTTCGGGGGCCATTAGAGATTCCAGGGGACAGGGCTTTCCTTCCCANGGAGCTTGTTAGCTGAAGNCGCNGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCGTACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTAACTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCCTGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGTTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA T TACCACTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTTT TAAAAAAAAAAAAAAA                                                                                                                                                                                                                                           ]
[+] EMBL C98540               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCTACCCTTTCACCAATCCTCCTACTATCCTGGAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTAGTGCTGTTCCCTAGTAGTGTCGTATTGGTTGTGAATCTCATNCCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACN CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA TNTAC  CTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTAT TAAAAAAA                                                                                                                                                                                                                                                   ]
[-] EMBL CB681877             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA T TACCACTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTAT TATTACTGTATCTTATAAAATGTGCTGTTGCTGTTGCTATAAAATGTTGTGGAGAGCTGTGAACATGTCTGTCGTGAGTGACGATGATATTTTTTGCGAGTACCAAAGCGTAGTGCTGCTGCTGCTTTGCAGTTTGCGCAGAGCCTCTCTCTGGGCATGTTGTGGTTCAGTGCTCTCTCTGGGCATCATGTACCATCCAGTCAAGTATTCATGTACAGTAGCAATAACAGTATATGTATACATGTGTTCAT]
[+] EMBL BE228845             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      G AAGA TTTTTAGTGCTGTTTCCTAGTAATGTCGTATTGGTTGTGAATCTCATACCCCNATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAANCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGANTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACNCTTGTTGANTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCNAATATTGTTATAGGACTA T TACCACTACGTGGTGCGGCTATGCTTGTCCANTTGTTTATGCACCATGCANGCATGCATGANTGCATGAACAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTA TGCTA                                                                                                                                                                                                                                                             ]
[+] EMBL AU057461             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTGTCGTATTGGTTGTGAATATCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACTCCCTATCTTGCCTTGCATTGGCATCCCATCCCATGACAGCACCTCGNGGATGCNGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTNGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTANN TAC  CTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTNT TAAAAAAA                                                                                                                                                                                                                                                   ]
[+] EMBL OSC101131            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TATTGGTTGTGAATCTCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGNCTA T TACCACTACGT GTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGNGGCTGCAGCAATCAAATAATAATAATAAATATA                                                                                                                                                                                                                                                                        ]
[+] EMBL AU082587             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTCGAGGATGCAGCTNATCCTCGGGGGCATGCAAGCATGNCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA T TNAC CTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTA   AAAAAAAAAAA                                                                                                                                                                                                                                               ]


>consensus_14808#0 GGCGATGGGTGCCATCATCGCGGAGCTTTTTTCACTGCGACCTCTTTTCCCTGGTTCAAA TGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTG GGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCAT ACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCT CTGCTCATGGGACCCACAAAGAAGGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTT TCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGC AACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTC CGTGGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACAC CCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAA TTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCC TTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAA AGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTC CAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGG GAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGA CCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGT TAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCAC CAATCCTCCTACTATCCTGAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCGAAGAGTT TTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAAAAATG GAGATGTGCCAGCCTGCTGGTACTCCTATCTTGCCTTGCATTGGCATCCATCCATGACAG CACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATG GAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTG TTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGT ACTACTACTACTATGTCAAATATTGTTATAGGACTATTACCACTACGTGGTGCGGCTATG CTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCA GCAATCAAATAATAATAATAAATATATACTATTGCTATTAAAAAAAAAAAAAAAAAAATG TGCTGTTGCTGTTGCTATAAAATGTTGTGGAGAGCTGTGAACATGTCTGTCGTGAGTGAC GATGATATTTTTTGCGAGTACCAAAGCGTAGTGCTGCTGCTGCTTTGCAGTTTGCGCAGA GCCTCTCTCTGGGCATGTTGTGGTTCAGTGCTCTCTCTGGGCATCATGTACCATCCAGTC AAGTATTCATGTACAGTAGCAATAACAGTATATGTATACATGTGTTCAT



consensusID : consensus_14808#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 631
fasta sequence
                              [GCTCGTGCCGAATTCGGCACGAGCGACTCTTTTCCCTGGTTCAAATGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTGGGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCATACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCTCTGCTCATGGGACCCACAAAGAANGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTTTCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGANCTGTGGATCAGAAAAATGCTANGANATATTCCGTGGGGCCCTTATCTNATGGGAGACAGCCGTTAATTACTCATACTTGANCGCTAACACCCCGGCAAGANCAGCTGGTGTGCAAAGGAACTGGANTTGGATCACCAAGTGAATATGAATTCTTGTCAGCTCCANAAGGTTACCATNAACTGACCAANGCAGAAGCCATGAACACCTTGGTCCANAACACACCACAGCANCANCANTTAGGANCAATGGAAATTACT]

[+] EMBL BE229728             [GCTCGTGCCGAATTCGGCACGAGCGACTCTTTTCCCTGGTTCAAATGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTGGGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCATACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCTCTGCTCATGGGACCCACAAAGAANGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTTTCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGANCTGTGGATCAGAAAAATGCTANGANATATTCCGTGGGGCCCTTATCTNATGGGAGACAGCCGTTAATTACTCATACTTGANCGCTAACACCCCGGCAAGANCAGCTGGTGTGCAAAGGAACTGGANTTGGATCACCAAGTGAATATGAATTCTTGTCAGCTCCANAAGGTTACCATNAACTGACCAANGCAGAAGCCATGAACACCTTGGTCCANAACACACCACAGCANCANCANTTAGGANCAATGGAAATTACT]


>consensus_14808#1 GCTCGTGCCGAATTCGGCACGAGCGACTCTTTTCCCTGGTTCAAATGAAGCAGACGAGAT TTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTGGGCTGAAGGACTGCA GCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCATACATCTTTCGGAAGT GGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCTCTGCTCATGGGACCC ACAAAGAANGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTTTCAGCCATGCTTCTA CATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGT TGGGGCTAAAGGANCTGTGGATCAGAAAAATGCTANGANATATTCCGTGGGGCCCTTATC TNATGGGAGACAGCCGTTAATTACTCATACTTGANCGCTAACACCCCGGCAAGANCAGCT GGTGTGCAAAGGAACTGGANTTGGATCACCAAGTGAATATGAATTCTTGTCAGCTCCANA AGGTTACCATNAACTGACCAANGCAGAAGCCATGAACACCTTGGTCCANAACACACCACA GCANCANCANTTAGGANCAATGGAAATTACT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14808#0      GGCGATGGGTGCCATCATCGCGGAGCTTTTTTCACTGCGACCTCTTTTCCCTGGTTCAAA 60
consensus_14808#1      ---------------GCTCGTGCCGAATTCGGCACGAGCGACTCTTTTCCCTGGTTCAAA 45
                                        *** *  *  **   ***      *******************

consensus_14808#0      TGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTG 120
consensus_14808#1      TGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTG 105
                       ************************************************************

consensus_14808#0      GGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCAT 180
consensus_14808#1      GGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCAT 165
                       ************************************************************

consensus_14808#0      ACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCT 240
consensus_14808#1      ACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCT 225
                       ************************************************************

consensus_14808#0      CTGCTCATGGGACCCACAAAGAAGGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTT 300
consensus_14808#1      CTGCTCATGGGACCCACAAAGAANGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTT 285
                       *********************** ************************************

consensus_14808#0      TCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGC 360
consensus_14808#1      TCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGC 345
                       ************************************************************

consensus_14808#0      AACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTC 420
consensus_14808#1      AACACCACCATCAGTTGGGGCTAAAGGANCTGTGGATCAGAAAAATGCTANGANATATTC 405
                       **************************** ************* ******* ** ******

consensus_14808#0      CGTGGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACAC 480
consensus_14808#1      CGTGGGGCCCTTATCTNATGGGAGAC-AGCCGTTAATTACTCATACTTGANCGCTAACAC 464
                       **************** ********* *********************** *********

consensus_14808#0      CCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAA 540
consensus_14808#1      CCCGGCAAGANCAGCTGGTGTGCAAAGGAA-CTGGANTTGGATCACCAAGTGAATATGAA 523
                       ********** ******************* ***** *********** ***********

consensus_14808#0      TTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCC 600
consensus_14808#1      TTCTTGTCAG-CTCCANAAGGTTACCATNAACTGACCAANGCAGAAGCCATGAAC--ACC 580
                       ********** ***** * *** ***** ******* ** ***** ** *****    **

consensus_14808#0      TTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAA 660
consensus_14808#1      TTGGTCCANAACAC-ACCA-CAGCANCANCANTTAGGANCAATGGAAATTACT------- 631
                       ******** * *** **** ***** ** ** * **** **************       

consensus_14808#0      AGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTC 720
consensus_14808#1      ------------------------------------------------------------
                                                                                   

consensus_14808#0      CAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGG 780
consensus_14808#1      ------------------------------------------------------------
                                                                                   

consensus_14808#0      GAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGA 840
consensus_14808#1      ------------------------------------------------------------
                                                                                   

consensus_14808#0      CCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGT 900
consensus_14808#1      ------------------------------------------------------------
                                                                                   

consensus_14808#0      TAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCAC 960
consensus_14808#1      ------------------------------------------------------------
                                                                                   

consensus_14808#0      CAATCCTCCTACTATCCTGAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCGAAGAGTT 1020
consensus_14808#1      ------------------------------------------------------------
                                                                                   

consensus_14808#0      TTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAAAAATG 1080
consensus_14808#1      ------------------------------------------------------------
                                                                                   

consensus_14808#0      GAGATGTGCCAGCCTGCTGGTACTCCTATCTTGCCTTGCATTGGCATCCATCCATGACAG 1140
consensus_14808#1      ------------------------------------------------------------
                                                                                   

consensus_14808#0      CACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATG 1200
consensus_14808#1      ------------------------------------------------------------
                                                                                   

consensus_14808#0      GAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTG 1260
consensus_14808#1      ------------------------------------------------------------
                                                                                   

consensus_14808#0      TTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGT 1320
consensus_14808#1      ------------------------------------------------------------
                                                                                   

consensus_14808#0      ACTACTACTACTATGTCAAATATTGTTATAGGACTATTACCACTACGTGGTGCGGCTATG 1380
consensus_14808#1      ------------------------------------------------------------
                                                                                   

consensus_14808#0      CTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCA 1440
consensus_14808#1      ------------------------------------------------------------
                                                                                   

consensus_14808#0      GCAATCAAATAATAATAATAAATATATACTATTGCTATTAAAAAAAAAAAAAAAAAAATG 1500
consensus_14808#1      ------------------------------------------------------------
                                                                                   

consensus_14808#0      TGCTGTTGCTGTTGCTATAAAATGTTGTGGAGAGCTGTGAACATGTCTGTCGTGAGTGAC 1560
consensus_14808#1      ------------------------------------------------------------
                                                                                   

consensus_14808#0      GATGATATTTTTTGCGAGTACCAAAGCGTAGTGCTGCTGCTGCTTTGCAGTTTGCGCAGA 1620
consensus_14808#1      ------------------------------------------------------------
                                                                                   

consensus_14808#0      GCCTCTCTCTGGGCATGTTGTGGTTCAGTGCTCTCTCTGGGCATCATGTACCATCCAGTC 1680
consensus_14808#1      ------------------------------------------------------------
                                                                                   

consensus_14808#0      AAGTATTCATGTACAGTAGCAATAACAGTATATGTATACATGTGTTCAT 1729
consensus_14808#1      -------------------------------------------------
                                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)