These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14808#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1729 fasta sequence [GGCGATGGGTGCCATCATCGCGGAGCTTTTTTCACTGCGACCTCTTTTCCCTGGTTCAAATGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTGGGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCATACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCTCTGCTCATGGGACCCACAAAGAAGGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTTTCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT-GGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT-GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG-AAGAGTTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT-CCTATCTTGCCTTGCATTGGCAT-CCAT-CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA-T-TACCACTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTAT-TAAAAAAAAAAAAAAAAAAATGTGCTGTTGCTGTTGCTATAAAATGTTGTGGAGAGCTGTGAACATGTCTGTCGTGAGTGACGATGATATTTTTTGCGAGTACCAAAGCGTAGTGCTGCTGCTGCTTTGCAGTTTGCGCAGAGCCTCTCTCTGGGCATGTTGTGGTTCAGTGCTCTCTCTGGGCATCATGTACCATCCAGTCAAGTATTCATGTACAGTAGCAATAACAGTATATGTATACATGTGTTCAT] [+] EMBL AK069526 [GGCGATGGGTGCCATCATCGCGGAGCTTTTTTCACTGCGACCTCTTTTCCCTGGTTCAAATGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTGGGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCATACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCTCTGCTCATGGGACCCACAAAGAAGGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTTTCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT GGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGCGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA T TACCACTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCT ] [+] EMBL CB681876 [GGCGATGGGTGCCATCATCGCGGAGCTTTTTTCACTGCGACCTCTTTTCCCTGGTTCAAATGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTGGGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCATACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCTCTGCTCATGGGACCCACAAAGAAGGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTTTCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCA ] [-] EMBL CB643218 [ ATCCCTTCTTTCAGCCATGCTTTTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT GGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTA ] [-] EMBL CB631837 [ TCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT GGGGCCTTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACGACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTA ] [-] EMBL CB631881 [ ACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT GGGGCCTTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACGACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTA ] [-] EMBL CB662473 [ ACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGT GGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCTCCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTA ] [-] EMBL CB646494 [ taAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTCCGTGGGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACACCCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAATTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTA ] [+] EMBL AA754573 [ ttnTTCTTGTCAGGCTCCAGAGGGTAACCATNAACTGACNCCNGCAGAGGCAATGAATCAGCCTTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGA CAATGGAAATTACTTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATTGCGGANAANCTGTCTCAGCTGACAGTGGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCNTNTTGGANCCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACCATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCNACAG ] [+] EMBL AU057460 [ cnTCACTAAAGACCAGGGCCCTCGTGCGCCTGACATNGCGGAGAAGCTGTCTCAGCTGACAGTNGGCTCCAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGGGAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACNCCNNCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACNACGATGAAACGGAAGCTGCCGCCACACNCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCGAAAGA TTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAA ] [-] EMBL CB683800 [ GCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGACCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGTTAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGTATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA T TACCACTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAAAGGAATAATAATAATAAATATATACTATTGCTATCTAAAAAga ] [-] EMBL CA761639 [ ACCCCTTTCGGGGGCCATTAGAGATTCCAGGGGACAGGGCTTTCCTTCCCANGGAGCTTGTTAGCTGAAGNCGCNGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCACCAATCCTCCTACTATCCT GAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCGTACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTAACTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCCTGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGTTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA T TACCACTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTTT TAAAAAAAAAAAAAAA ] [+] EMBL C98540 [ GCTACCCTTTCACCAATCCTCCTACTATCCTGGAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTAGTGCTGTTCCCTAGTAGTGTCGTATTGGTTGTGAATCTCATNCCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACN CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA TNTAC CTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTAT TAAAAAAA ] [-] EMBL CB681877 [ GCCAACAGAGCCGATCTCCCTCG AAGAGTTTTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA T TACCACTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTAT TATTACTGTATCTTATAAAATGTGCTGTTGCTGTTGCTATAAAATGTTGTGGAGAGCTGTGAACATGTCTGTCGTGAGTGACGATGATATTTTTTGCGAGTACCAAAGCGTAGTGCTGCTGCTGCTTTGCAGTTTGCGCAGAGCCTCTCTCTGGGCATGTTGTGGTTCAGTGCTCTCTCTGGGCATCATGTACCATCCAGTCAAGTATTCATGTACAGTAGCAATAACAGTATATGTATACATGTGTTCAT] [+] EMBL BE228845 [ G AAGA TTTTTAGTGCTGTTTCCTAGTAATGTCGTATTGGTTGTGAATCTCATACCCCNATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAANCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGANTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACNCTTGTTGANTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCNAATATTGTTATAGGACTA T TACCACTACGTGGTGCGGCTATGCTTGTCCANTTGTTTATGCACCATGCANGCATGCATGANTGCATGAACAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTA TGCTA ] [+] EMBL AU057461 [ GTGTCGTATTGGTTGTGAATATCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACTCCCTATCTTGCCTTGCATTGGCATCCCATCCCATGACAGCACCTCGNGGATGCNGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTNGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTANN TAC CTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTNT TAAAAAAA ] [+] EMBL OSC101131 [ TATTGGTTGTGAATCTCATACCCCAATAAAAATGGAGATGTGCCAGCCTGCTGGTACT CCTATCTTGCCTTGCATTGGCAT CCAT CCATGACAGCACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGNCTA T TACCACTACGT GTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGNGGCTGCAGCAATCAAATAATAATAATAAATATA ] [+] EMBL AU082587 [ CTCGAGGATGCAGCTNATCCTCGGGGGCATGCAAGCATGNCCGGGCGCGTCTGCATGGAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTGTTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGTACTACTACTACTATGTCAAATATTGTTATAGGACTA T TNAC CTACGTGGTGCGGCTATGCTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCAGCAATCAAATAATAATAATAAATATATACTATTGCTA AAAAAAAAAAA ] consensusID : consensus_14808#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 631 fasta sequence [GCTCGTGCCGAATTCGGCACGAGCGACTCTTTTCCCTGGTTCAAATGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTGGGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCATACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCTCTGCTCATGGGACCCACAAAGAANGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTTTCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGANCTGTGGATCAGAAAAATGCTANGANATATTCCGTGGGGCCCTTATCTNATGGGAGACAGCCGTTAATTACTCATACTTGANCGCTAACACCCCGGCAAGANCAGCTGGTGTGCAAAGGAACTGGANTTGGATCACCAAGTGAATATGAATTCTTGTCAGCTCCANAAGGTTACCATNAACTGACCAANGCAGAAGCCATGAACACCTTGGTCCANAACACACCACAGCANCANCANTTAGGANCAATGGAAATTACT] [+] EMBL BE229728 [GCTCGTGCCGAATTCGGCACGAGCGACTCTTTTCCCTGGTTCAAATGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTGGGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCATACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCTCTGCTCATGGGACCCACAAAGAANGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTTTCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGCAACACCACCATCAGTTGGGGCTAAAGGANCTGTGGATCAGAAAAATGCTANGANATATTCCGTGGGGCCCTTATCTNATGGGAGACAGCCGTTAATTACTCATACTTGANCGCTAACACCCCGGCAAGANCAGCTGGTGTGCAAAGGAACTGGANTTGGATCACCAAGTGAATATGAATTCTTGTCAGCTCCANAAGGTTACCATNAACTGACCAANGCAGAAGCCATGAACACCTTGGTCCANAACACACCACAGCANCANCANTTAGGANCAATGGAAATTACT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14808#0 GGCGATGGGTGCCATCATCGCGGAGCTTTTTTCACTGCGACCTCTTTTCCCTGGTTCAAA 60 consensus_14808#1 ---------------GCTCGTGCCGAATTCGGCACGAGCGACTCTTTTCCCTGGTTCAAA 45 *** * * ** *** ******************* consensus_14808#0 TGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTG 120 consensus_14808#1 TGAAGCAGACGAGATTTACAAAATCTGTAGCATTCTTGGTACTCCGAATCAGCGTACCTG 105 ************************************************************ consensus_14808#0 GGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCAT 180 consensus_14808#1 GGCTGAAGGACTGCAGCTTGCGGCATCTATTCGTTTTCAGTTTCCCCAGTCTGGAAGCAT 165 ************************************************************ consensus_14808#0 ACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCT 240 consensus_14808#1 ACATCTTTCGGAAGTGGTTCCCTCAGCAAGTGAAGATGCGATCAGCCTTATTTCGTGGCT 225 ************************************************************ consensus_14808#0 CTGCTCATGGGACCCACAAAGAAGGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTT 300 consensus_14808#1 CTGCTCATGGGACCCACAAAGAANGCCAACAGCGGTGGAGGTTTTGCAGCATCCCTTCTT 285 *********************** ************************************ consensus_14808#0 TCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGC 360 consensus_14808#1 TCAGCCATGCTTCTACATCCCCCCTTCACTTCGATTCAGATCAACAAACGGATATGCAGC 345 ************************************************************ consensus_14808#0 AACACCACCATCAGTTGGGGCTAAAGGAGCTGTGGATCAGAAGAATGCTAGGAGATATTC 420 consensus_14808#1 AACACCACCATCAGTTGGGGCTAAAGGANCTGTGGATCAGAAAAATGCTANGANATATTC 405 **************************** ************* ******* ** ****** consensus_14808#0 CGTGGGGCCCTTATCTAATGGGAGACCAGCCGTTAATTACTCATACTTGAGCGCTAACAC 480 consensus_14808#1 CGTGGGGCCCTTATCTNATGGGAGAC-AGCCGTTAATTACTCATACTTGANCGCTAACAC 464 **************** ********* *********************** ********* consensus_14808#0 CCCGGCAAGAGCAGCTGGTGTGCAAAGGAAGCTGGAGTTGGATCACCAGGTGAATATGAA 540 consensus_14808#1 CCCGGCAAGANCAGCTGGTGTGCAAAGGAA-CTGGANTTGGATCACCAAGTGAATATGAA 523 ********** ******************* ***** *********** *********** consensus_14808#0 TTCTTGTCAGGCTCCAGAGGGTAACCATAAACTGACAAAGGCAGAGGCAATGAATCAGCC 600 consensus_14808#1 TTCTTGTCAG-CTCCANAAGGTTACCATNAACTGACCAANGCAGAAGCCATGAAC--ACC 580 ********** ***** * *** ***** ******* ** ***** ** ***** ** consensus_14808#0 TTGGTCCAGACCACCACCAGCAGCAGCAGCAGTAAGGAGCAATGGAAATTACTTCACTAA 660 consensus_14808#1 TTGGTCCANAACAC-ACCA-CAGCANCANCANTTAGGANCAATGGAAATTACT------- 631 ******** * *** **** ***** ** ** * **** ************** consensus_14808#0 AGACCAGGGCCCTCGTGCGCCTGACATTGCGGAGAAGCTGTCTCAGCTGACAGTGGGCTC 720 consensus_14808#1 ------------------------------------------------------------ consensus_14808#0 CAACAGGGTGCCAAGCTTGGCTTCGGACAAGTTTGTGGATATGAAGGCAAGAACCCATGG 780 consensus_14808#1 ------------------------------------------------------------ consensus_14808#0 GAATACCATGAAGCGGCCTTTGCCTCCTGTGGGAACCAGGACATGGCACGCCCCGGCCGA 840 consensus_14808#1 ------------------------------------------------------------ consensus_14808#0 CCCCTTCCGGCGCCCATACGAGATGCCAGGCGACAGGGCTTTCCTTCCCAGGAAGCTCGT 900 consensus_14808#1 ------------------------------------------------------------ consensus_14808#0 TAGCTGAAGACTACGATGAAACGGAAGCTGCCGCCACACTCCTCTTTGCTACCCTTTCAC 960 consensus_14808#1 ------------------------------------------------------------ consensus_14808#0 CAATCCTCCTACTATCCTGAAAAATAAGAAGCCAACAGAGCCGATCTCCCTCGAAGAGTT 1020 consensus_14808#1 ------------------------------------------------------------ consensus_14808#0 TTTAGTGCTGTTTCCTAGTAGTGTCGTATTGGTTGTGAATCTCATACCCCAATAAAAATG 1080 consensus_14808#1 ------------------------------------------------------------ consensus_14808#0 GAGATGTGCCAGCCTGCTGGTACTCCTATCTTGCCTTGCATTGGCATCCATCCATGACAG 1140 consensus_14808#1 ------------------------------------------------------------ consensus_14808#0 CACCTCGAGGATGCAGCTGATCCTCGGGGGCATGCAAGCATGGCCGGGCGCGTCTGCATG 1200 consensus_14808#1 ------------------------------------------------------------ consensus_14808#0 GAAACCTTGTGTTTCGAGTCGGAACTGTGTGTTATTTGCTCCCTAGTGACGTGACGCTTG 1260 consensus_14808#1 ------------------------------------------------------------ consensus_14808#0 TTGAGTCGTTTCTGCTCTGCGTTGGCTGGCCCCTGCCTGTGACATCGCAGCTACTACAGT 1320 consensus_14808#1 ------------------------------------------------------------ consensus_14808#0 ACTACTACTACTATGTCAAATATTGTTATAGGACTATTACCACTACGTGGTGCGGCTATG 1380 consensus_14808#1 ------------------------------------------------------------ consensus_14808#0 CTTGTCCAGTTGTTTATGCACCATGCAGGCATGCATGAGTGCATGACCAGCGCGTCTGCA 1440 consensus_14808#1 ------------------------------------------------------------ consensus_14808#0 GCAATCAAATAATAATAATAAATATATACTATTGCTATTAAAAAAAAAAAAAAAAAAATG 1500 consensus_14808#1 ------------------------------------------------------------ consensus_14808#0 TGCTGTTGCTGTTGCTATAAAATGTTGTGGAGAGCTGTGAACATGTCTGTCGTGAGTGAC 1560 consensus_14808#1 ------------------------------------------------------------ consensus_14808#0 GATGATATTTTTTGCGAGTACCAAAGCGTAGTGCTGCTGCTGCTTTGCAGTTTGCGCAGA 1620 consensus_14808#1 ------------------------------------------------------------ consensus_14808#0 GCCTCTCTCTGGGCATGTTGTGGTTCAGTGCTCTCTCTGGGCATCATGTACCATCCAGTC 1680 consensus_14808#1 ------------------------------------------------------------ consensus_14808#0 AAGTATTCATGTACAGTAGCAATAACAGTATATGTATACATGTGTTCAT 1729 consensus_14808#1 ------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||