These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14810#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1538 fasta sequence [AGGGGGGTGGTGGTGGTGCGGGGTGGGGCGGCTCCAACCTGGGGCGACGGTTCCCCACGCCCAAGGAGATTTGCCGTGGGCTCGATAAGTTCGTCATCGGCCAGGAGCGCGCCAAGAAGGTACTGTCTGTAGCAGTTTATAACCACTATAAAAGGATACACTGCGAGTTACTCTCCAGCAGGTCTGCTGGAGATTGTAGCGAGACTGATTCTTGCGCGAGTGATACTGATGGAGTGGAGCTTGAGAAAAGCAACATCCTTGTGATGGGTCCGACAGGCTC-G----GGGAAAACATTGCTGGCAAAAACCCTTGCAAGGTTTGTGAATGTGCCATTTGTTATAGCTGATGCAACAACCCTCACTCAGGCTGGATATGTTGGCGAGGATGTTGAATCTATCCTGTATAAGCTCCTAGCGGCTGCTGATTTTGATGTAGCTGCTGCTCAGCAAGGGATTGTCTATATTGACGAAGTTGATAAAATAACAAAGAAGGCTGAAAGCATCAACCTTAGTAGAGATGTTTCAGGTG-AAGGTGTTCAACAAGCACTGCTAAAAATGCTTGAGGGAAC----GGTCGTTAGTGTTCCTGAGAAAGGGGCTAGAAGGCACCCAAGGGGTGACAATATCCAGATTGATACAAAAAACATTCTCTTCATTTGTGGTGGTGCTTTTGTTGATTTGGAGAAGACTATTTCGGAAAGGAGACATGATTCTTCCATTGGTTTCCAAGCACCAATTCGTTCAAATATGCGGACTGGGGGTGTGATAAATGCTGAGATCACATCCTCGTTACTCGAATCAGTTGAAAGTGGTGATCTCATTGCATATGGATTGATCCCAGAATTTGTTGGTAGATTTCCCATTCTTGTTAGTCTATCTTCCCTTAGTGAAGACCAACTTGTTGAGGTTCTTACAAAACCAAAGAATGCCCTAGGCAGGCAGTATACAAAGTTGTTTGAAATGAATGATGTCAAGTTGCATTTTACTGAGAAGGCTTTACGGCTTATTTCCAAAAGAGCAATAGCGAAGAACACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCCATGTACGAGATTCCAGAAATACGAACTGGAAAAGACAAAATAGACGCGGTTGTTGTTGACGAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCA-TTGGACCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCC-AGCATGTAGGGATTCCTGAC-AACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAGCCAATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGCAATTTCTCTTGGCGATCAAAACCTTCCCTTTCTGTGACATTTTTTTAAAAAGAAAAGGTAA-AG-GGG-AATAGATTCTCATGGC---CAAAAAAAAAAAAAAAAAAAGA] [+] EMBL AU062920 [AGGGGGGTGGTGGTGGTGCGGGGTGGGGCGGCTCCAACCTGGGGCGACGGTTCCCCACGCCCAAGGAGATTTGCCGTGGGCTCGATAAGTTCGTCATCGGCCAGGAGCGCGCCAAGAAGGTACTGTCTGTAGCAGTTTATAACCACTATAAAAGGATACACTGCGAGTTACTCTCCAGCAGGTCTGCTGGAGATTGTAGCGAGACTGATTCTTGCGCGAGTAATACTGATGGAGTGGAGCTTGAGAAAAGCAACATCCTTGTGATGGGTCCGACAGGCTCGG GGGAAAACATTGCTGGCAAAAACCCTTGCAAGGTTTGTGAATGTNCCATTTG ] [+] EMBL CB671320 [ GGTGGGGCGGCTCCAACCTGGGGCGACGGTTCCCCACGCCCAAGGAGATTTGCCGTGGGCTCGATAAGTTCGTCATCGGCCAGGAGCGCGCCAAGAAGGTACTGTCTGTAGCAGTTTATAACCACTATAAAAGGATACACTGCGAGTTACTCTCCAGCAGGTCTGCTGGAGATTGTAGCGAGACTGATTCTTGCGCGAGTGATACTGATGGAGTGGAGCTTGAGAAAAGCAACATCCTTGTGATGGGTCCGACAGGCTC GGTCAGGGAAAACATTGCTGGCAAAAACCCTTGCAAGGTTTGTGAATGTGCCATTTGTTATAGCTGATGCAACAACCCTCACTCAGGCTGGATATGTTGGCGAGGATGTTGAATCTATCCTGTATAAGCTCCTAGCGGCTGCTGATTTTGATGTAGCTGCTGCTCAGCAAGGGATTGTCTATATTGACGAAGTTGATAAAATAACAAAGAAGGCTGAAAGCATCAACCTTAGTAGAGATGTTTCAGGTG AAGGTGTTCAACAAGCACTGCTAAAAATGCTTGAGGGAACGATAGGTCGTTAGTGTTCCTGAGAAAGGGGCTAGAAGGCACCCAAGGGGTGACAATATCCAGATTGATACAAAAAACATTCTCTTCATTTGTGGTGGTGCTTTTGTTGATTTGGAGAAGACTATTTCGGAAAGGAGACATGATTCTTCCATTGGTTTCCAAGCACCAATTCGTTCAAATATGCGGACTGGGGGTGTGATAAATGCTGAGATCACATCCTCGTTACTCGAATCAGTTGAAAGTGGTGATCTCATTGCATAT ] [+] EMBL CF303940 [ CGGCTCCAACCTGGGGCGACGGTTCCCCACGCCCAAGGAGATTTGCCGTGGGCTCGATAAGTTCGTCATCGGCCAGGAGCGCGCCAAGAAGGTACTGTCTGTAGCAGTTTATAACCACTATAAAAGGATACACTGCGAGTTACTCTCCAGCAGGTCTGCTGGAGATTGTAGCGAGACTGATTCTTGCGCGAGTGATACTGATGGAGTGGAGCTTGAGAAAAGCAACATCCTTGTGATGGGTCCGACAGGCTC G GGGAAAACATTGCTGGCAAAAACCCTTGCAAGGTTTGTGAATGTGCCATTTGTTATAGCTGATGCAACAACCCTCACTCAGGCTGGATATGTTGGCGAGGATGTTGAATCTATCCTGTATAAGCTCCTAGCGGCTGCTGATTTTGATGTAGCTGCTGCTCAGCAAGGGATTGTCTATATTGACGAAGTTGAT AAATAACAAAGAAGGCTGAAAGCATCAACCTTAGTAGAGATGTTTCAGGTGAAAGGTGTTCAACAAGCACTGCTAAAAATGCTTGAGGGAAC GGTCGTTAGTGTTCCTGAGAAAGGGGCTAGAAGGCACCCAAGGGGTGACAATATCCAGATTGATACAAAAAACATT ] [+] EMBL CB674193 [ CCCACGCCCAAGGAGATTTGCCGTGGGCTCGATAAGTTCGTCATCGGCCAGGAGCGCGCCAAGAAGGTACTGTCTGTAGCAGTTTATAACCACTATAAAAGGATACACTGCGAGTTACTCTCCAGCAGGTCTGCTGGAGATTGTAGCGAGACTGATTCTTGCGCGAGTGATACTGATGGAGTGGAGCTTGAGAAAAGCAACATCCTTGTGATGGGTCCGACAGGCTC G GGGAAAACATTGCTGGCAAAAACCCTTGCAAGGTTTGTGAATGTGCCATTTGTTATAGCTGATGCAACAACCCTCACTCAGGCTGGATATGTTGGCGAGGATGTTGAATCTATCCTGTATAAGCTCCTAGCGGCTGCTGATTTTGATGTAGCTGCTGCTCAGCAAGGGATTGTCTATATTGACGAAGTTGATAAAATAACAAAGAAGGCTGAAAGCATCAACCTTAGTAGAGATGTTTCAGGTG AAGGTGTTCAACAAGCACTGCTAAAAATGCTTGAGGGAACGATAGGTCGTTAGTGTTCCTGAGAAAGGGGCTAGAAGGCACCCAAGGGGTGACAATATCCAGATTGATACAAAAAACATTCTCTTCATTTGTGGTGGTGCTTTTGTTGATTTGGAGAAGACTATTTCGGAAAGGAGACATGATTCTTCCATTGGTTTCCAAGCACCAATTCGTTCAAATATGCGGACTGGGGGTGTGATAAATGCTGAGATCACATCCTCGTTACTCGAATCAGTTGAAAGTGGTGATCTCATTGCA ] [+] EMBL CB000842 [ AGGGAAC GGTCGTTAGTGTTCCTGAGAAAGGGGCTAGAAGGCACCCAAGGGGTGACAATATCCAGATTGATACAAAAAACATTCTCTTCATTTGTGGTGGTGCTTTTGTTGATTTGGAGAAGACTATTTCGGAAAGGAGACATGATTCTTCCATTGGTTTCCAAGCACCAATTCGTTCAAATATGCGGACTGGGGGTGTGATAAATGCTGAGATCACATCCTCGTTACTCGAATCAGTTGAAAGTGGTGATCTCATTGCATATGGATTGATCCCAGAATTTGTTGGTAGATTTCCCATTCTTGTTAGTCTATCTTCCCTTAGTGAAGACCAACTTGTTGAGGTTCTTACAAAACCAAAGAATGCCCTAGGCAGGCAGTATACAAAGTTGTTTGAAATGAATGATGTCAAGTTGCATTTTACTGAGAAGGCTTTACGGCTTATTTCCAAAAGAGCAATAGCGAAGAACACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCCATGTACGAGATTCCAGAAATACGAACTGGAAAAGACAAAATAGACGCGGTTGTTGTTGACGAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCA TTGGACCTTT ] [+] EMBL CB000801 [ AGGGAAC GGTCGTTAGTGTTCCTGAGAAAGGGGCTAGAAGGCACCCAAGGGGTGACAATATCCAGATTGATACAAAAAACATTCTCTTCATTTGTGGTGGTGCTTTTGTTGATTTGGAGAAGACTATTTCGGAAAGGAGACATGATTCTTCCATTGGTTTCCAAGCACCAATTCGTTCAAATATGCGGACTGGGGGTGTGATAAATGCTGAGATCACATCCTCGTTACTCGAATCAGTTGAAAGTGGTGATCTCATTGCATATGGATTGATCCCAGAATTTGTTGGTAGATTTCCCATTCTTGTTAGTCTATCTTCCCTTAGTGAAGACCAACTTGTTGAGGTTCTTACAAAACCAAAGAATGCCCTAGGCAGGCAGTATACAAAGTTGTTTGAAATGAATGATGTCAAGTTGCATTTTACTGAGAAGGCTTTACGGCTTATTTCCAAAAGAGCAATAGCGAAGAA ] [-] EMBL CB645264 [ GATTGATCCCAGAATTTGTTGGTAGATTTCCCATTCTTGTTAGTCTATCTTCCCTTAGTGAAGACCAACTTGTTGAGGTTCTTACAAAACCAAAGAATGCCCTAGGCAGGCAGTATACAAAGTTGTTTGAAATGAATGATGTCAAGTTGCATTTTACTGAGAAGGCTTTACGGCTTATTTCCAAAAGAGCAATAGCGAAGAACACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCCATGTACGAGATTCCAGAAATACGAACTGGAAAAGACAAAATAGACGCGGTTGTTGTTGACGAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCA TTGGACCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCC AGCATGTAGGGATTCCTGAC AACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAGCCAATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGCAATTTCTCTTGGCGATCAAAACCTTCCCTTTCTGTGACATTTTTTTAAAAATAAAAGGTAA AG GGG AATAGATTC ] [-] EMBL CB674194 [ ATTGATCCCAGAATTTGTTGGTAGATTTCCCATTCTTGTTAGTCTATCTTCCCTTAGTGAAGACCAACTTGTTGAGGTTTTTACAAAACCAAAGAATGCCCTAGGCAGGCAGTATACAAAGTTGTTTGAAATGAATGATGTCAAGTTGCATTTTACTGAGAAGGCTTTACGGCTTATTTCCAAAAGAGCAATAGCGAAGAACACTGGAGCTTGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCCATGTACGAGATTCCAGAAATACGAACTGGAAAAGACAAAATAGACGCGGTTGTTGTTGACGAAGACTTTGTTGGATTTACAAATCAGCATGGTTTTGGAGCCAAGATTTTTTGTGGAGAAGGAGCA TTGGACCTTTTCTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTTTAGAGTGGCC AGCATGTAGGGATTCCTGAC AACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAGCCAATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGGGCAATTTTTTTTGGGGATCAAAACCTTCCCTTTTTGTGACATTTTTTTAAAAAGAAAAGGTAA AG GGG AAAAAA AAAAA AAAAAAAAAAAAAAAAAAAAGA] [+] EMBL BQ529306 [ TGTTTGAAATGAATGATGTCAAGTTGCATTTTACTGAGAAGGCTTTACGGCTTATTTCCAAAAGAGCAATAGCGAAGAACACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCCATGTACGAGATTCCAGAAATACGAACTGGAAAAGACAAAATAGACGCGGTTGTTGTTGACGAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGG ] [+] EMBL BI798535 [ TCCAGAAATACGAACTGGAAAAGACCAAATAGACGCGGTTGTTGTTGACGAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCACTTGGACCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCC AGCATGTAGGGATTCCTGAC ACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAGCC ATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGC ATTTCTCTTGGCGATC AAACCTTCCCTTTCTGTGACATTTTTTTAAAAAGAAAAGGTAA AG GGG AATAGATTCTCATGGC CAAAAAAAAAA ] [+] EMBL BI798431 [ TCCAGAAATACGAACTGGAAAAGACAAAATAGACGCGGTTGTTGTTGACGAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCA TTGGACCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCCAAGCATGTAGGGATTCCTGACAAACAGTAATTATGTATATAACTTGTTACCGCCCATGTAACTGTAGCCAATTCAAAGGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTCCAATTTCTCTTGGCGATCAAAACCTTCCCTTTCTG GACATTTTTTTAAAAAGAAAAGGTAA AGCGGGCAATAGATTCTCATGGC CAAAAAAAAAA ] [+] EMBL BI798162 [ TCCAGAAATACGAACTGGAAAAGACCAAATAGACGCGGTTGTTGTTGACGAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCACTTGGACCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCC AGCATGTAGGGATTCCTGAC AACAGTAATTATGTATATAACTTGTTATCGCCCATGTAACTGTAGCC ATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGCAATTTCTCTTGGCGATC AAACCTTCCCTTTCTGTGACATTTTTTTAAAAAGAAAAGGTAACAG CCG CATAGATTCTCATGCC CAAAAAAAAAAAA ] [+] EMBL AA752025 [ ggcacgaGTGGAGAAGGA NN TTGNACCTATACTTGGATTAACATTANANAGAAACNACGNTACGACCGNCGGAGAAGGTGGATNGAAAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCC AGCATGTACGGATTCCTGAC AACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTA CCAATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCNGGGGTGCAATTTCTCTTGGCGATCAAAACCTTCCCTTTCTGTGACATTTTTTTAAAAAGAAAAGGTAA AN GGG AATATATTCT ] [+] EMBL AU057392 [ nCCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGANCCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCC AGCATGTAGGGATTCCTGAC AACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAGCCAATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGCAATTTCTCTTGGCGATCAAAACCTTCCCTTTCTGTGACATTTTTTTAAAAAGAAAAGGTAA AG GGG AATAGATTCTCATGGCNNTGATGAAAAAAAAAAAAAAAA ] [+] EMBL BI797457 [ AGAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCC AGCATGTAGGGATTCCTGAC AACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAGCC ATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGT C ATTTCTCTTGGCGATC AAACCTTCCCTTTCTGTGACATTTTTTTAAAAAGACAAGGTAA AG GGG AATAGATTCTCAT GC CAAAA ] consensusID : consensus_14810#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 686 fasta sequence [TTAATTGCATATGGATTGATTCCAGAATTTGTTGGTAGATTTCCCATTTTTGGTAGTCTATCTTCCCTTAGTGAAGACCAACTTGTTGAGGTTTTTACAAAACCAAAGAATGCCCTAGGCAGGCAGTATACAAAGTTGTTTGAAATGAATGATGTCAAGTTGCATTTTAGTGAGAAGGCTTTACGGCTTATTTTTAAAAGAGCAATAGCGAAGAACACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCCATGTAGGAGATTCCAGAAATACGAAGTGGAAAAGACAAAATAGATGCGGTTGTTGTTGAGGAAGACTTTGTTGGATTTACAAATCAGCATGGTTTTGGAGCCAAGATTTTTTGTGGAGAAGGAGCATTGGACCTTTATTTGGATGAACATAATAAAGAATCAACGCTACGACGGTTGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAGGGATTCCTGACAACAGTAATTATGTATATAACTTGTTATTGGGCATGTAAGTGTAGCCAATTCAAATGTAAAGTCATCTTCCTCATACATTTATGTATTAGGTGTATGTTGGGGGTGCAATTTCTCATGGGGATCATCCCCACCACCACCACCACCCCCCGCCGCAACCTTAAGGACAT] [-] EMBL CB645263 [TTAATTGCATATGGATTGATTCCAGAATTTGTTGGTAGATTTCCCATTTTTGGTAGTCTATCTTCCCTTAGTGAAGACCAACTTGTTGAGGTTTTTACAAAACCAAAGAATGCCCTAGGCAGGCAGTATACAAAGTTGTTTGAAATGAATGATGTCAAGTTGCATTTTAGTGAGAAGGCTTTACGGCTTATTTTTAAAAGAGCAATAGCGAAGAACACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCCATGTAGGAGATTCCAGAAATACGAAGTGGAAAAGACAAAATAGATGCGGTTGTTGTTGAGGAAGACTTTGTTGGATTTACAAATCAGCATGGTTTTGGAGCCAAGATTTTTTGTGGAGAAGGAGCATTGGACCTTTATTTGGATGAACATAATAAAGAATCAACGCTACGACGGTTGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAGGGATTCCTGACAACAGTAATTATGTATATAACTTGTTATTGGGCATGTAAGTGTAGCCAATTCAAATGTAAAGTCATCTTCCTCATACATTTATGTATTAGGTGTATGTTGGGGGTGCAATTTCTCATGGGGATCATCCCCACCACCACCACCACCCCCCGCCGCAACCTTAAGGACAT] consensusID : consensus_14810#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 682 fasta sequence [AAGGGAGGATCTTGCCCTAGGGAGGGGCCCGCTTCTTAAGGTTTTTCCAGAACCAAGGGATTCCCCTAACGCCGACCGTACCCGAATTGGTTTAAACTGAAGGACCCCGGCGTCCCTTTTACTGAGAGGCCTTTGGCACTTTTTTCCGAAAGAGCCATAGGGCAGAGGCACTGGAGCCCTAGGCTTAAGGTCCATATTGGAAAGGTGATTGTTTGGGTCCATGTCCGAGGTTCCCGAAATTCGACCTGGAAAAGACAAAATTGACGCGGGTGTTGTTGGCGAAAACTTTGTTGGATCTACAAATTAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCCTTGGCCCTTTCCTTGGATGAACATAATAAAGAATCAACGCTTCCGCGGTTGGAGAAGGTGGATGGAGAACCTGGCATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAGGGATTCCTGACAACAGTAATTATGTATATAACTTGTTATTGGCCATGTAACTGTAGCCAATTCAAATGTAAAGTCATCCTCCTTATACATTCATGTATAAGGTCCATGTTGGGGGTGCAATTTTTTTTGGCGATCAAAACCTTCCCCTTTTGTGACATTTTTTTAAAAAGAAAAGGTAAAGGGGAATAGATTTTCATGGCCCTGATGAAAAAAAAAAAAAAA] [-] EMBL CA759731 [AAGGGAGGATCTTGCCCTAGGGAGGGGCCCGCTTCTTAAGGTTTTTCCAGAACCAAGGGATTCCCCTAACGCCGACCGTACCCGAATTGGTTTAAACTGAAGGACCCCGGCGTCCCTTTTACTGAGAGGCCTTTGGCACTTTTTTCCGAAAGAGCCATAGGGCAGAGGCACTGGAGCCCTAGGCTTAAGGTCCATATTGGAAAGGTGATTGTTTGGGTCCATGTCCGAGGTTCCCGAAATTCGACCTGGAAAAGACAAAATTGACGCGGGTGTTGTTGGCGAAAACTTTGTTGGATCTACAAATTAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCCTTGGCCCTTTCCTTGGATGAACATAATAAAGAATCAACGCTTCCGCGGTTGGAGAAGGTGGATGGAGAACCTGGCATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAGGGATTCCTGACAACAGTAATTATGTATATAACTTGTTATTGGCCATGTAACTGTAGCCAATTCAAATGTAAAGTCATCCTCCTTATACATTCATGTATAAGGTCCATGTTGGGGGTGCAATTTTTTTTGGCGATCAAAACCTTCCCCTTTTGTGACATTTTTTTAAAAAGAAAAGGTAAAGGGGAATAGATTTTCATGGCCCTGATGAAAAAAAAAAAAAAA] consensusID : consensus_14810#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 519 fasta sequence [AAGTTTATGGCTTAATCCAAGTACGAGATTCCCAAAATTCGAACTGGAAAAGACCAAATAAAGGCGGTTGGTTTTTAAAAAGATTTGTTGGATTTCCAAAAAAGCAGGTTTTGAACCCAAATTTTTTGGGAAGAAGAAGCATTGGCCCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAGGGATTCCTGACAACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAACCAATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGCAATTTTTTTTGGCGATCAAAACCTTCCCTTTTTGTGACATTTTTTTAAAAAGAAAAGGTAAAGGGGAATAGATTTTCATGGCCATGATGAAGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTC] [-] EMBL AW155626 [AAGTTTATGGCTTAATCCAAGTACGAGATTCCCAAAATTCGAACTGGAAAAGACCAAATAAAGGCGGTTGGTTTTTAAAAAGATTTGTTGGATTTCCAAAAAAGCAGGTTTTGAACCCAAATTTTTTGGGAAGAAGAAGCATTGGCCCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAGGGATTCCTGACAACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAACCAATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGCAATTTTTTTTGGCGATCAAAACCTTCCCTTTTTGTGACATTTTTTTAAAAAGAAAAGGTAAAGGGGAATAGATTTTCATGGCCATGATGAAGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14810#2 ------------------------------------------------------------ consensus_14810#3 ------------------------------------------------------------ consensus_14810#0 AGGGGGGTGGTGGTGGTGCGGGGTGGGGCGGCTCCAACCTGGGGCGACGGTTCCCCACGC 60 consensus_14810#1 ------------------------------------------------------------ consensus_14810#2 ------------------------------------------------------------ consensus_14810#3 ------------------------------------------------------------ consensus_14810#0 CCAAGGAGATTTGCCGTGGGCTCGATAAGTTCGTCATCGGCCAGGAGCGCGCCAAGAAGG 120 consensus_14810#1 ------------------------------------------------------------ consensus_14810#2 ------------------------------------------------------------ consensus_14810#3 ------------------------------------------------------------ consensus_14810#0 TACTGTCTGTAGCAGTTTATAACCACTATAAAAGGATACACTGCGAGTTACTCTCCAGCA 180 consensus_14810#1 ------------------------------------------------------------ consensus_14810#2 ------------------------------------------------------------ consensus_14810#3 ------------------------------------------------------------ consensus_14810#0 GGTCTGCTGGAGATTGTAGCGAGACTGATTCTTGCGCGAGTGATACTGATGGAGTGGAGC 240 consensus_14810#1 ------------------------------------------------------------ consensus_14810#2 ------------------------------------------------------------ consensus_14810#3 ------------------------------------------------------------ consensus_14810#0 TTGAGAAAAGCAACATCCTTGTGATGGGTCCGACAGGCTCGGGGAAAACATTGCTGGCAA 300 consensus_14810#1 ------------------------------------------------------------ consensus_14810#2 ------------------------------------------------------------ consensus_14810#3 ------------------------------------------------------------ consensus_14810#0 AAACCCTTGCAAGGTTTGTGAATGTGCCATTTGTTATAGCTGATGCAACAACCCTCACTC 360 consensus_14810#1 ------------------------------------------------------------ consensus_14810#2 ------------------------------------------------------------ consensus_14810#3 ------------------------------------------------------------ consensus_14810#0 AGGCTGGATATGTTGGCGAGGATGTTGAATCTATCCTGTATAAGCTCCTAGCGGCTGCTG 420 consensus_14810#1 ------------------------------------------------------------ consensus_14810#2 ------------------------------------------------------------ consensus_14810#3 ------------------------------------------------------------ consensus_14810#0 ATTTTGATGTAGCTGCTGCTCAGCAAGGGATTGTCTATATTGACGAAGTTGATAAAATAA 480 consensus_14810#1 ------------------------------------------------------------ consensus_14810#2 ------------------------------------------------------------ consensus_14810#3 ------------------------------------------------------------ consensus_14810#0 CAAAGAAGGCTGAAAGCATCAACCTTAGTAGAGATGTTTCAGGTGAAGGTGTTCAACAAG 540 consensus_14810#1 ------------------------------------------------------------ consensus_14810#2 ------------------------------------------------------------ consensus_14810#3 ------------------------------------------------------------ consensus_14810#0 CACTGCTAAAAATGCTTGAGGGAACGGTCGTTAGTGTTCCTGAGAAAGGGGCTAGAAGGC 600 consensus_14810#1 ------------------------------------------------------------ consensus_14810#2 ------------------------------------------------------------ consensus_14810#3 ------------------------------------------------------------ consensus_14810#0 ACCCAAGGGGTGACAATATCCAGATTGATACAAAAAACATTCTCTTCATTTGTGGTGGTG 660 consensus_14810#1 ------------------------------------------------------------ consensus_14810#2 ------------------------------------------------------------ consensus_14810#3 ------------------------------------------------------------ consensus_14810#0 CTTTTGTTGATTTGGAGAAGACTATTTCGGAAAGGAGACATGATTCTTCCATTGGTTTCC 720 consensus_14810#1 ------------------------------------------------------------ consensus_14810#2 ------------------------------------------------------------ consensus_14810#3 ------------------------------------------------------------ consensus_14810#0 AAGCACCAATTCGTTCAAATATGCGGACTGGGGGTGTGATAAATGCTGAGATCACATCCT 780 consensus_14810#1 ------------------------------------------------------------ consensus_14810#2 ------------------------------------------------------------ consensus_14810#3 ------------------------------------------------------------ consensus_14810#0 CGTTACTCGAATCAGTTGAAAGTGGTGATCTCATTGCATATGGATTGATCCCAGAATTTG 840 consensus_14810#1 -----------------------------TTAATTGCATATGGATTGATTCCAGAATTTG 31 consensus_14810#2 --------------------AAGGGAGGATCTTGCCCTAGGGAGGGGCCCGCTTCTTAAG 40 consensus_14810#3 ------------------------------------------------------------ consensus_14810#0 TTGGTAGATTTCCCATTCTTGTTAGTCTATCTTCCCTTAGTGAAGA-CCAACTTGTTGAG 899 consensus_14810#1 TTGGTAGATTTCCCATTTTTGGTAGTCTATCTTCCCTTAGTGAAGA-CCAACTTGTTGAG 90 consensus_14810#2 GTTTTTCCAGAACCAAGGGATTCCCCTAACGCCGACCGTACCCGAATTGGTTTAAACTGA 100 consensus_14810#3 ------------------------------------------------------------ consensus_14810#0 GTTCTTACAAAACCAAAGAATGCCCT--AGGCAGGCAGTATACAAAGTTGTTTGAAATGA 957 consensus_14810#1 GTTTTTACAAAACCAAAGAATGCCCT--AGGCAGGCAGTATACAAAGTTGTTTGAAATGA 148 consensus_14810#2 AGGACCCCGGCGTCCCTTTTACTGAGAGGCCTTTGGCACTTTTTTCCGAAAGAGCCATAG 160 consensus_14810#3 ------------------------------------------------------------ consensus_14810#0 ATGATGTCAAGTTGCATTTTACTGAGAAGGCTTTACGGCTTATTTCCAAAAGAGCAATAG 1017 consensus_14810#1 ATGATGTCAAGTTGCATTTTAGTGAGAAGGCTTTACGGCTTATTTTTAAAAGAGCAATAG 208 consensus_14810#2 GGCAGAGGCACTGGAGCCCTAGGCTTAAGGTCCATATTGGAAAGGTGATTGTTTGGGTCC 220 consensus_14810#3 -----------------------------------------AAGTTTATGGCTTAA-TCC 18 consensus_14810#0 CGAAGAA-CACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCC 1076 consensus_14810#1 CGAAGAA-CACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCC 267 *** * ** * * *** consensus_14810#2 ATGTCCGAGGTTCCCGAAATTCGACCTGGAAAAGACAAAATTGACGCGGGTGTTGTTGGC 280 consensus_14810#3 AAGTACGAGATTCCCAAAATTCGAACTGGAAAAGACCAAATAAAGGCGGTTGGTTTTTAA 78 consensus_14810#0 ATGTACGAGATTCCAGAAATACGAACTGGAAAAGACAAAATAGACGCGGTTGTTGTTGAC 1136 consensus_14810#1 ATGTAGGAGATTCCAGAAATACGAAGTGGAAAAGACAAAATAGATGCGGTTGTTGTTGAG 327 * ** *** **** **** *** ********** **** * **** ** * ** consensus_14810#2 GAAAACTTTGTTGGATCTACAAATTAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAA 340 consensus_14810#3 AAAGA-TTTGTTGGATTTCCAAAAAAGCA-GGTTTTGAACCCAA-ATTTTTTGGGAAGAA 135 consensus_14810#0 GAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAA 1196 consensus_14810#1 GAAGACTTTGTTGGATTTACAAATCAGCATGGTTTTGGAGCCAAGATTTTTTGTGGAGAA 387 ** * * ******** * **** **** **** ** * **** *** **** * **** consensus_14810#2 GGAGCCTTGGCCCTTTCCTTGGATGAACATAATAAAGAATCAACGCTTCCGCGGTTGGAG 400 consensus_14810#3 GAAGCATTGGCCCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAG 195 consensus_14810#0 GGAGCATTGGACCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAG 1256 consensus_14810#1 GGAGCATTGGACCTTTATTTGGATGAACATAATAAAGAATCAACGCTACGACGGTTGGAG 447 * *** **** ***** ***************************** * **** **** consensus_14810#2 AAGGTGGATGGAGAACCTGGCATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAG 460 consensus_14810#3 AAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAG 255 consensus_14810#0 AAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCCAGCATGTAG 1316 consensus_14810#1 AAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAG 507 ******************* ******************** ******************* consensus_14810#2 GGATTCCTGACAACAGTAATTATGTATATAACTTGTTATTGGCCATGTAACTGTAGCCAA 520 consensus_14810#3 GGATTCCTGACAACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAACCAA 315 consensus_14810#0 GGATTCCTGACAACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAGCCAA 1376 consensus_14810#1 GGATTCCTGACAACAGTAATTATGTATATAACTTGTTATTGGGCATGTAAGTGTAGCCAA 567 *************************************** ** ******* **** **** consensus_14810#2 TTCAAATGTAAAGTCATCCTCCTTATACATTCATGTATAAGGTCCATGTTGGGGGTGCAA 580 consensus_14810#3 TTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGCAA 375 consensus_14810#0 TTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGCAA 1436 consensus_14810#1 TTCAAATGTAAAGTCATCTTCCTCATACATTTATGTATTAGGTGTATGTTGGGGGTGCAA 627 ****************** **** ******* ****** **** **** ********** consensus_14810#2 TTTTTTTTGGCGATCAAAACCTTCCCCTTTTGTGACATTTTTTTAAAAAGAAAAGGTAAA 640 consensus_14810#3 TTTTTTTTGGCGATCAAAACCTTCCCTTTTTGTGACATTTTTTTAAAAAGAAAAGGTAAA 435 consensus_14810#0 TTTCTCTTGGCGATCAAAACCTTCCCTTTCTGTGACATTTTTTTAAAAAGAAAAGGTAAA 1496 consensus_14810#1 TTTCTCATGGGGATCATC-CCCACCACCACCACCACCCCCCGCCGCAACCTTAAGGACAT 686 *** * *** ***** ** ** ** ** **** * consensus_14810#2 GGGGAATAGATTTTCATGGCCCTGATGAA-----AAAAAAAAAAAAA------------- 682 consensus_14810#3 GGGGAATAGATTTTCATGGCCATGATGAAGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAA 495 consensus_14810#0 GGGGAATAGATTCTCATGGCCAAAAAAAA-----AAAAAAAAAAAGA------------- 1538 consensus_14810#1 ------------------------------------------------------------ consensus_14810#2 ------------------------ consensus_14810#3 AAAAAAAACTCGAGACTAGTTCTC 519 consensus_14810#0 ------------------------ consensus_14810#1 ------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||