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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14821#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1575 fasta sequence
[AAGCAAACGGAGGAGGAACTGAGGAAGACGCCTGGGCTGAGAACCCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGT-CCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGC-TTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCT-GAAGAAAACCTTGAAATGGCGTTCAGAGTA-TAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGGAAGACCTTTTTAACATGGAAGAATTAGAATCTGCATTTGGTGGCAAAAACCAGGCTACTTTTAACATAAATGATTATGCTGCAAGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTTGCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTGAAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGGGAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAAGAAACAGTGGCTGTATCTGACAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAAGCCGCAGTGACTTCATCAAACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCACCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK066184 [AAGCAAACGGAGGAGGAACTGAGGAAGACGCCTGGGCTGAGAACCCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGT CCCGTCTCGCCG AGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGC TTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCT GAAGAAAACCTTGAAATGGCGTTCAGAGTA TAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGGAAGACCTTTTTAACATGGAAGAATTAGAATCTGCATTTGGTGGCAAAAACCAGGCTACTTTTAACATAAATGATTATGCTGCAAGGATGAGAGGAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTTGCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTGAAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGGGAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAAGAAACAGTGGCTGTATCTGACAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAAGCCGCAGTGACTTCATCAAACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCACCATGGAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGAC ]
[+] EMBL AK062267 [ GGAGGAGGAACTGAGGAAGACGCCTGGGCTGAGAACCCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGT CCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGC TTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCT GAAGAAAACCTTGAAATGGCGTTCAGAGTA TAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGGAAGACCTTTTTAACATGGAAGAATTAGAATCTGCATTTGGTGGCAAAAACCAGGCTACTTTTAACATAAATGATTATGCTGCAAGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTTGCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTGAAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGGGAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAAGAAACAGTGGCTGT ]
[+] EMBL CF303547 [ AGGAACTGAGGAAGACGCCTGGGCTGAGAACCCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGT CCCGTCTCGCCG AGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGC TTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCT GAAGAAAACCTTGAAATGGCGTTCAGAGTA TAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATGTGGTATACTGTATGGAGAATGCAATTCTGAAT ]
[+] EMBL CB646276 [ GAAGACGCCTGGGCTGAGAACCCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGT CCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGC TTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCT GAAGAAAACCTTGAAATGGCGTTCAGAGTA TAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACT ACAAGATCATGGAAGACCTTTTT ACATGGAAGAA TAGAATCTGCATTTGGTGGCAAAAA CAGG ]
[+] EMBL OSC111601 [ AAGACGCCTGGGCTGAGAACCCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCG GTACCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGCTTTCGATTGCGAGGTACCTGGTAGCGAGGAACTTGGAAGTGAAGAAGGNCACGAAAATGCTNGAAGAAAACCTTGAAATGGCGTTCAGAGTA TAAGCCAGA ]
[+] EMBL OSS2415A [ ACGCCTGGGCTGAGAACCCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCG GT CCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGC TTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGGAGGCCACGAAAATGTT GAAGGAAACCTTGAAATGGCGTTCAGAGTATTAAGCCAGATGAGNTCCGTTTGGGTTAGGTAGCAAACG AGTTGCAACTGG AAAATNTACCG ACTG TTTCTTTTACAA ]
[+] EMBL CB625749 [ ACGCCTGGGCTGAGAACCCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGT CCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGC TTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCT GAAGAAAACCTTGAAATGGCGTTCAGAGTA TAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAAGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAA ]
[+] EMBL CB649219 [ CCGACCACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGT CCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGC TTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCT GAAGAAAACCTTGAAATGGCGTTCAGAGTA TAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGGAAGACCTTTTTAACATGGAAGAATTAGAATCTGCATTTGGTGGCAAAAACCAGGCTACTTTTAACATAAATGATTAT ]
[+] EMBL CF331384 [ TGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGGAAGACCTTTTTAACATGGAAGAATTAGAATCTGCATTTGGTGGCAAAAACCAGGCTACTTTTAACATAAATGATTATGCTGCAAGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTTGCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTGAAGAGTGAAGAGACTGCGTCTGANAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGGGAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGAC ]
[-] EMBL CB649220 [ TTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGGAAGACCTTTTTAACATGGAAGAATTAGAATCTGCATTTGGTGGCAAAAACCAGGCTACTTTTAACATAAATGATTATGCTGCAAGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTTGCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTGAAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGGGAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAAGAAACAGTGGCTGTATCTGACAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAAGCCGCAGTGACTTCATCAAACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCACCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCAAAAAAAAAAAAga ]
[-] EMBL CB646099 [ TTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGGAAGACCTTTTTAACATGGAAGAATTAGAATCTGCATTTGGTGGCAAAAACCAGGCTACTTTTAACATAAATGATTATGCTGCAAGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTTGCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTGAAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGGGAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAAGAAACAGTGGCTGTATCTGACAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAAGCCGCAGTGACTTCATCAAACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCACCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACA ]
[+] EMBL AU166334 [ AAGAAACAGTGGCTGTATTTGCCAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAAGCCGCAGTGACTTCATCAAACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCNCCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTNTCAGCTCTCACCAANAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTNGTGACCTCATTTGAGAACCCTTTCGCAACAATATNTGCCAGATGATAAATAACAGCACGACACTTTGTTGCA AAAAAAAAAAAAAAAA ]
[-] EMBL CF331385 [ AAAAAGAGCTTGAATTTGAAAATGGGAAAGCCGCAGTGATTTCATCAAACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCCCCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTTTCAGCTTTCACCAAGAGATGAACCCCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTGGGCACCACCATCCCAACCTTGGTGACCTCATTTGAGAACCCTTTCGCAACAATATTTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCAAAAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL CA756015 [ CTGATCCATGAATACCACCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCANAANAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CA756094 [ CTGATCCATGAATACCACCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCNNAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_14821#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 805 fasta sequence
[TGCAAGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTTGCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTGAAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGGGAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAAGAAACAGTGGCTGTATCTGCCAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAAGCCGCAGTGACTTCATCAAACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCCCCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACCCCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCAGTTTCCTCCTGTCATTTCTCTCGAGGGTTTATTCACTTACTGCCTGCTATATCTTGCAATCCTTTTTTTTTTCGAATCGGAGAAATGTTTTCTGCTTTCTTTGAACAACGTTGCAATAGAAAACTGTTTACTGCTTTCTTGCCTAAAAAGGAA]
[-] EMBL CB652451 [TGCAAGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTTGCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTGAAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGGGAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAAGAAACAGTGGCTGTATCTGCCAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAAGCCGCAGTGACTTCATCAAACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCCCCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACCCCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCAGTTTCCTCCTGTCATTTCTCTCGAGGGTTTATTCACTTACTGCCTGCTATATCTTGCAATCCTTTTTTTTTTCGAATCGGAGAAATGTTTTCTGCTTTCTTTGAACAACGTTGCAATAGAAAACTGTTTACTGCTTTCTTGCCTAAAAAGGAA]
consensusID : consensus_14821#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 786 fasta sequence
[CTGGGCCCTTTAAGCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGTCCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGCTTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCTGAAGAAAACCTTGAAATGGCGTTCAGAGTATAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGG]
[+] EMBL CB652450 [CTGGGCCCTTTAAGCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGTCCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGCTTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCTGAAGAAAACCTTGAAATGGCGTTCAGAGTATAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGG]
consensusID : consensus_14821#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 430 fasta sequence
[ACTTCATCACATACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTANAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCACCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCATGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCAGTTTCCTCCTGTCATTTCTCTCGAGGGTTTATTCACTTACTGCCTGCTATATCTTGCAATCCTTTTTTTTTTCGAAGAAAAAAAAAA]
[+] EMBL BI806895 [ACTTCATCACATACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTANAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCACCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCATGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCAGTTTCCTCCTGTCATTTCTCTCGAGGGTTTATTCACTTACTGCCTGCTATATCTTGCAATCCTTTTTTTTTTCGAAGAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14821#1 ------------------------------------------------------------
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 AAGCAAACGGAGGAGGAACTGAGGAAGACGCCTGGGCTGAGAACCCGAAGAAGCCCGACG 60
consensus_14821#2 ------------------------------------------------------------
consensus_14821#1 ------------------------------------------------------------
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 ACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGTCCCGTCTCGCCG 120
consensus_14821#2 ------------------------------------------------------------
consensus_14821#1 ------------------------------------------------------------
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 AGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAA 180
consensus_14821#2 ------------------------------------------------------------
consensus_14821#1 ------------------------------------------------------------
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 GAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGA 240
consensus_14821#2 ------------------------------------------------------------
consensus_14821#1 ------------------------------------------------------------
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 CAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGCTTCGATTGCGAGGTACCTGGTA 300
consensus_14821#2 ------------------------------------------------------------
consensus_14821#1 ------------------------------------------------------------
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 GCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCTGAAGAAAACCTTGAAATGGCGT 360
consensus_14821#2 ------------------------------------------------------------
consensus_14821#1 ------------------------------------------------------------
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 TCAGAGTATAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGA 420
consensus_14821#2 ------------------------------------------------------------
consensus_14821#1 ------------------------------------------------------------
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 AAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCT 480
consensus_14821#2 ------------------------------------------------------------
consensus_14821#1 ------------------------------------------------------------
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 GGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAG 540
consensus_14821#2 ------------------------------------------------------------
consensus_14821#1 ------------------------------------------------------------
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 AATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCT 600
consensus_14821#2 ------------------------------------------------------------
consensus_14821#1 ------------------------------------------------------------
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 GGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAA 660
consensus_14821#2 ------------------------------------------------------------
consensus_14821#1 ------------------------------------------------------------
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 GGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAG 720
consensus_14821#2 ------------------------------------------------------------
consensus_14821#1 ------------------------------------------------------------
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 TCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTT 780
consensus_14821#2 ------------------------------------------------------------
consensus_14821#1 ------------------------------------------------------------
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 GTATACCCAGATAGGCCTGAGACTAACAAGATCATGGAAGACCTTTTTAACATGGAAGAA 840
consensus_14821#2 ------------------------------------------------------------
consensus_14821#1 --------------------------------------------------------TGCA 4
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 TTAGAATCTGCATTTGGTGGCAAAAACCAGGCTACTTTTAACATAAATGATTATGCTGCA 900
consensus_14821#2 --------------------------------------------------------CTGG 4
consensus_14821#1 AGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTT 64
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 AGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTT 960
consensus_14821#2 GCCCTTTAAGCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCAC 64
consensus_14821#1 GCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTG 124
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 GCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTG 1020
consensus_14821#2 CGCGCGCGCGCGTCCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAG 124
consensus_14821#1 AAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGG 184
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 AAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGG 1080
consensus_14821#2 CGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGAT 184
consensus_14821#1 GAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAA 244
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 GAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAA 1140
consensus_14821#2 TGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGA 244
consensus_14821#1 GAAACAGTGGCTGTATCTGCCAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAA 304
consensus_14821#3 ------------------------------------------------------------
consensus_14821#0 GAAACAGTGGCTGTATCTGACAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAA 1200
consensus_14821#2 TGCTTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAAT 304
consensus_14821#1 GCCGCAGTGACTTCATCAAA--CGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAA- 361
consensus_14821#3 ---------ACTTCATCACATACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTANAA 51
consensus_14821#0 GCCGCAGTGACTTCATCAAA--CGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAA- 1257
consensus_14821#2 GCTGAAGAAAAC-CTTGAAA--TGGCGTTCAGAGTATAAG----CCAGATGAGATCCGTT 357
* * * * * ** *** ** * *** **** **
consensus_14821#1 GGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCA--TGAATACCCCCAT 419
consensus_14821#3 GGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCA--TGAATACCACCAT 109
consensus_14821#0 GGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCA--TGAATACCACCAT 1315
consensus_14821#2 GGGATGAGAT-AGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGAC 416
** ** * *** * * ** * * * * * *** *** *
consensus_14821#1 GAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCA 479
consensus_14821#3 GAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCA 169
consensus_14821#0 GAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCA 1375
consensus_14821#2 AAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAA--GGCCA 474
* * * * * * *** **** * **** * ** ***
consensus_14821#1 AGAGATGAACCCCAAATGTTAACTAGAAACGCTTTAACACACAGCA-GGAATGTGTTGCC 538
consensus_14821#3 AGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCATGGAATGTGTTGCC 229
consensus_14821#0 AGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCA-GGAATGTGTTGCC 1434
consensus_14821#2 AGGGGCAGAT--CAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCA 532
** * * ** ** ** ** * * * * ** **** * **
consensus_14821#1 TGACTTGTTTTG--TAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGA-ACC 595
consensus_14821#3 TGACTTGTTTTG--TAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGA-ACC 286
consensus_14821#0 TGACTTGTTTTG--TAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGA-ACC 1491
consensus_14821#2 TGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATC 592
**** * * * ** * ** * * * * ** * * * * *
consensus_14821#1 CTTTC--GCAACAATATCTGC--CAGATGATAAATAACAGCACGACACTTTGTTGCACTC 651
consensus_14821#3 CTTTC--GCAACAATATCTGC--CAGATGATAAATAACAGCACGACACTTTGTTGCACTC 342
consensus_14821#0 CTTTC--GCAACAATATCTGC--CAGATGATAAATAACAGCACGACACTTTGTTGCACTC 1547
consensus_14821#2 ACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGG 652
*** * **** * * ****** * ** *** * **
consensus_14821#1 AGTTTCCTCCTGTCATTTCTCTCGAGGGTTTATTCACTTACTGCCTGCTATATCTTGCAA 711
consensus_14821#3 AGTTTCCTCCTGTCATTTCTCTCGAGGGTTTATTCACTTACTGCCTGCTATATCTTGCAA 402
consensus_14821#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------------------------- 1575
consensus_14821#2 TGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGT--CTTTCTGGAAGATCGCAAGC 710
*
consensus_14821#1 TCCTTTTTTTTTTCGAATCGGAGAAATGTTTTCTGCTTTCTTTGAACAACGTTGCAATAG 771
consensus_14821#3 TCCTTTTTTTTTTCGAAGAAAAAAAAAA-------------------------------- 430
consensus_14821#0 ------------------------------------------------------------
consensus_14821#2 CCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAG 770
consensus_14821#1 AAAACTGTTTACTGCTTTCTTGCCTAAAAAGGAA 805
consensus_14821#3 ----------------------------------
consensus_14821#0 ----------------------------------
consensus_14821#2 ACTAACAAGATCATGG------------------ 786
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||