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Oryza sativa
cluster # 14836 cluster # 14836       Sequences # 18       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14836#0 length = 1051 sequences # 16  
consensus_14836#1 length = 510 sequences # 2  

consensusID : consensus_14836#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 1051
fasta sequence
                              [GAGAGAGAGAGAGAGAGAGAGAGAGGCAGGAGAGTAGGAGACAGAAGGAGAGTTAGCCGCCGAGCACGACGACTCCTCCCTCTCCTCTCCCCTTCCGGCTTCCACGCGTCGGGAACCGAAGTCCAAACCGAGAGAACATCGACATGGCGGCGGCGGTGGCGGCGCA-NTCCGCGGGCCCTCGGCGGCGGCGGCGAGGAGGTGGCCGGCCCCCTCCGGCGGCGTCCTCCGCTTCGCGCCGCTCGCTACGTCGAC-GGTCCCGGCGTCGATCGCCCGGGGATCGCTCCG-GGGGTTCCCGC-TGGCGTCGTGC-TGCCCAAGCCATTGA-TAGC-AATGTGCA-TGAAGGCGGAGTATACCAGCAGTCCTGTTGATCCTAATGCTGTCGCGGAGCATACAGAAGATGAAAATCAACAGCCAACCACTGTATCGCCTACTAATGC-AGAAATAGACATAGACCAAGAGGCTGTTCCTCAACACAAGGGTGCAATAATACATGACTTTTG-CCTAGGGAT-CCCTTTTGGTGGAATTTTATTTTCCATGGGCCTTGTTGGATTTCTGTTTTGGAGGAGTACCGTAAGTCTTACTTTCGGTGTTGCACCTGGCCTTGCAATATTGGCCCTTGGTGTGCTTAGCCTTAAGGTTTGGAGGAGTGGCAAGTCAAGCTTGCCATTCATACTGGCACAAGCAGCTGTTGCTGCTGCGGTAGCATGGAAGCACTTCCAGGCGTACACCAC--AACAAAGAAACTGCTT-CCCTGGGCTTTTTACA-CTGCACTCAGTGCCGCTATGATCTGCTTCTACTCATATGTGCTACTTGCTGGGGGGAATCCACCACCA-AAGAAGAAGGCAGCAGTTGCTCAATAAGTC-GTGTCCTTTCGTGTTATCATAGTTGTACTGATATAGGAATGTGTTTGCTTTTTTTTCCCTTTCTTTTCCATTGGTGAACAGCGAAAAGAATAAGTTGTATTCTACCTTAGCTCATTTGGGTACATAACGAGAAGACCTAAGAAAAATTTTTTCTGCCTCAACATGAACTATTTTTTCCTGGACAAAAAAAAAA]

[+] EMBL AU075431             [GAGAGAGAGAGAGAGAGAGAGAGAGGCAGGAGAGTAGGAGACAGAAGGAGAGTTAGCCGCCGAGCACGACGACTCCTCCCTCTCCTCTCCCCTTCCGGCTTCCACGCGTCGGGAACCGAAGTCCAAACCGAGAGAACATCGACATGGCGGCGGCGGTGGCGGCGCACTTCCGCGGGCCCTCGGCGGCGGCGGCGAGGAGGTGGNCGGCCCCCNCCGGCGGCGTCCTCCGCTTCGCGCCGCTCGCTACGTCGAN GGTCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU064013             [                                 GTAGGAGACAGAAGGAGAGTTAGCCGCCGAGCACGACGACTCCTCCCTCTCCTCTCCCCTTCCGGCTTCCACGCGTCGGGAACCGAAGTCCAAACCGAGAGAACATCGACATGGCGGCGGCGGTGGCGGCGCA NTCCGCGGGCCCTCGGCGGCGGCGGCGAGGAGGTGGCCGGCCCCCTCCGGCGGCGTCCTCCGCTTCG GCCGCTCGCTACGTCGAC GGTCCCGGCGTCGATCGCCCGGGGATCGCTCCG GGGGTTCCCGC TGGCGTCGTGC TGCCCAAGCCATTGA TAGC AATGTGCA TGAAGGCGGAGTATACCAGCAGTCCTGTTGATCCTAATGCTTTNGCGGAG ATACAGAAGNTG AAATTAACAGCCAACCACTNTATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSS1666A             [                                 GTAGGAGACAGAAGGAGAGTTAGCCGCCGAGCACGACGACTCCTCCCTCTCCTCTCCCCTTCCGGCTTCCACGCGTCGGGAACCGAAGTCCAAACCGAGAGAACATCGACATGGCGGCGGCGGTGGCGGCGCA NTCCGCGGGCCCTCGGCGGCGGCGGCGAGGAGGTGGCCGGCCCCCTCCGGCGGCGTCCTCCGCTTCGCGCCGCTCGCTACGTCGAC GGTCCCGGCGTCGATCGCCCGGGGATCGCTCCG GGGGTTCCCGCTTGGCGTCGTGCTTGCCCAAGCCATTGA TAG  AATGTGCA TNAAGGCGGAGTATACCAGCAGTCCTGTTNATNCTAATTCTGTCGCGGAGATTACAGAAGATG AAATCAACAAGCAACCANT TATt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSS1665A             [                                 GTAGGAGACAGAAGGAGAGTTAGCCGCCGAGCACGACGACTCCTCCCTCTCCTCTCCCCTTCCGGCTTCCACGCGTCGGGAACCGAAGTCCAAACCGAGAGAACATCGACATGGCGGCGGCGGTGGCGGCGCA NTCCGCGGGCCCTCGGCGGCGGCGGCGAGGAGGTNGCCGGCCCCCTCCGGCGGCGTCCTCCGCTTCGCGCCGCTCGCTACGTCGAC GGTCCCGGCGTCGATCGCCCGGGGATCGCTCCG GGGGTTCCCGC TGGCGTCGTGCTTGCCCAAGCCATTGA TAG  AATGTGCA TNAAGGCGGAGTATANCAGCANTCCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL OSS12395A            [                                 GTAGGAGACAGAAGGAGAGTTAGCCGCCGAGCACGACGACTCCTCCCTCTCCTCTCCCCTTCCGGCTTCCACGCGTCGGGAACCGAAGTCCAAACCGAGAGAACATCGACATGGCGNCGGCGGTGGCGGCGCA NTCCGCGGGCCCTCGGCGGCGNCGNCGAGGAGGTGGCCGGCCCCCTCCGNCGGCGTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU183104             [                                 GTAGGAGACAGAAGGAGAGTTAGCCGCCGAGCACGACGACTCCTCCCTCTCCTCTCCCCTTCCGGCTTCCACGCGTCGGGAACCGAAGTCCAAACCGAGAGAACATCGACATGGCGGCGGCGGTGGCGGCGCAGCTCCGCGGGCCCTCGGCGGCGGCGGCGAGGAGGTGGCCGGCCCCCTCCGGCGGCGTCCTCCGCTTCGCGCCGNTCGCTACGTCGAC GGTCCCGGCGTCGATCGCCCGGGGATCGCTCCGCGGGGTTCCCGC TGGCGTCGTGC TGCCCAAGCCATTGA TAGC AATGTGCA TGAAGGCGGAGTATACCAGCAGTCCTGTTGATCCTAATGCTGTCGCGGAGCATACAGAAGATGAAAATCAACAGCCAACCACTGTATCGCCTACTAATGC AGAAATAGACATAGACCAAGAGGCTGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF306322             [                                  gAGGAGACAGAAGGAGAGTTAGCCGCCGAGCACGACGACTCCTCCCTCTCCTCTCCCCTTCCGGCTTCCACGCGTCGGGAACCGAAGTCCAAACCGAGAGAACATCGACATGGCGGCGGCGGTGGCGGCGCAGCTCCGCGGGCCCTCGGCGGCGGCGGCGAGGAGGTGGCCGGCCCCCTCCGGCGGCGTCCTCCGCTTCGCGCCGCTCGCTACGTCGAC GGTCCCGGCGTCGATCGCCCGGGGATCGCTCCGCGGGGTTCCCGC TGGCGTCGTGC TGCCCAAGCCATTGA TAGC AATGTGCA TGAAGGCGGAGTATACCAGCAGTCCTGTTGATCCTAATGCTGTCGCGGAGCATACAGAAGATGAAAATCAACAGCCAACCACTGTATCGCCTACTAATGC AGAAATAGACATAGACCAAGAGGCTGTTCCTCAACACAAGGGTGCAATAATACATGACTTTTG CCTAGGGAT CCCTTTTGGTGGAATTTTATTTTCCATGGGCCTTGTTGGATTTCTGTTTTGGAGGAGTACCGTAAGTCTTACTTTCGGTGTTGCACCTGGCCTTGCAATATTGGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OSS4275A             [                                       GACAGAAGGAGAGTTAGCCGCCGAGCACGACGACTCCTCCCTCTCCTCTCCCCTTCCGGCTTCCACGCGTCGGGAACC AAGTCCAAACCGAGAGAACATCGACATGGCGGCGGCGGTGGCGGCGCA NTCCGCGGGCCCTCGGCGGCGGCGGCGAGGAGGTGGCCGGCCCCCTCCGGCGGCGTCCTCCGNTTCGCGCCGCTCGCTACGTCGACGGGTCCCGGCGTCGATCGNCCGGGGATCGNTTCG GGGGTTTCCGT TGGCGTCGTGCTTGCCCAAGNCATTGATTAGCAAATGTGCATTTAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU063901             [                                       GACAGAAGGAGAGTTAGCCGCCGAGCACGACGACTCCTCCCTCTCCTCTCCCCTTCCGGCTTCCACGCGTCGGGAACCGAAGTCCAAACCGAGAGAACATCGACATGGCGGCGGCGGTGGCGGCGCA NTCCGCGGGCCCTCGGCGGCGGCGGCGAGGAGGTGGCCGGCCCCCTCCGGCGGCGTCCTCCGCTTCG GCCGCTCGCTACGTCGAC GGTCCCGGCGTCGATCGNCCGGGGATCGNTCCG GGGGTTCCCGN TGGCGTCGTGC TGCCCAAGCCATTGA TAGC AATGTGCA TGAAGGCGGAGTATACCAGCAGTCCTGTTGATCCTAATGCTGTCGCGGAG ATACAGAAGATGAAAAT AACAGCCAACCACTGTATCGCCTACTAATNCAAGAAATAGACATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU095074             [                                                AGAGTTAGCCGCCGAGCACGACGACTCCTCCCTCTCCTCTCCCCTTCCGGCTTCCACGCGTCGGGAACCGAAGTCCAAACCGAGAGAACATCGACATGGCGGCGGCGGTGGCGGCGCA NTCCGCGGGCCCTCGGCGGCGGCGGCGANGAGGTGGCCGGCCCCCTCCGGCGGCGTCCTCCGCTTCG GCCGCTCGCTACGTCGAC GGTCCCGGCGTCGATCGCCCNGGGATCGCTCCG GGGGTTCCCGC TGGCGTCGTGC TGNCCAAGCCATTGA TAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF304655             [                                                                                                                                                                                                                                                                                                  GGTTCCCGC TGGCGTCGTGC TGCCCAAGCCATTGA TAGC AATGTGCA TGAAGGCGGAGTATACCAGCAGTCCTGTTGATCCTAATGCTGTCGCGGAGCATACAGAAGATGAAAATCAACAGCCAACCACTGTATCGCCTACTAATGC AGAAATAGACATAGACCAAGAGGCTGTTCCTCAACACAAGGGTGCAATAATACATGACTTTTG CCTAGGGAT CCCTTTTGGTGGAATTTTATTTTCCATGGGCCTTGTTGGATTTCTGTTTTGGAGGAGTACCGTAAGTCTTACTTTCGGTGTTGCACCTGGCCTTGCAATATTGGCCCTTGGTGTGCTTAGCCTTAAGGTTTGGAGGAGTGGCAAGTCAAGCTTGCCATTCATAC                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU030489             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGACCAAGAGGCTGTTCCTCAACACAAGGNTGCAATAATACATGACTTTTGCCCTAGGGATCCCCTTTTGGTGGAATTTTATTTTCCATGGGCCTTGTTGGATTTCTGTTTTGGAGGAGTACCGTAAGTCTTACTTTCGGTGTTGCACCTGGCCTTGCAATATTGGCCCTTGGTGTGCTTAGCCTTAAGGTTTGGAGGAGTGGCAAGTCAAGCTTGCCATTCATACTGGCACAAGCAGCTGTTGCTGCTGCGGTAGCATGGAAGCACTTCCAGGCGTACACCAC  AACAAAGAAACTGCTT CCCTGGGCTTTTTACA CTGCACTCAGTGCCGCTATGATCTGCTTCTACTCATATGTGCTACTTGCTGGGGGGAATCCACCACCA AAGAAGAAGGCAGCAGTTGCTCAATAAGTC GTGTCCTTTCGTGTTATCATAGTTGTACTGATATAGGAATGTGTTTGCTTTTTTTTCCCTTTC TTTCCATTGGTGAACAGCGAAAAGAATAAGTTGTATTCTACCTTAGCTCATTTGGGTACATAACGAGAAGACCTAAGAAAAA                                               ]
[+] EMBL CA767410             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TAATACATGACTTTTG CCTAGGGAT CCCTTTTGGTGGAATTTTATTTTCCATGGGCCTTGTTGGATTTCTGTTTTGGAGGAGTACCGTAAGTCTTACTTTCGGTGTTGCACCTGGCCTTGCAATATTGGCCCTTGGTGTGCTTAGCCTTAAGGTTTGGAGGAGTGGCAAGTCAAGCTTGCCATTCATACTGGCACAAGCAGCTGTTGCTGCTGCGGTAGCATGGAAGCACTTCCAGGCGTACACCAC  AACAAAGAAACTGCTT CCCTGGGCTTTTTACA CTGCACTCAGTGCCGCTATGATCTGCTTCTACTCATATGTGCTACTTGCTGGGGGGAATCCACCACCA AAGAAGAAGGCAGCAGTTGCTCAATAAGTC GTGTCCTTTCGTGTTATCATAGTTGTACTGATATAGGAATGTGTTTGCTTTTTTTTCCCTTTCTTTTCCATTGGTGAACAGCGAAAAGAATAAGTTGTATTCTACCTTAGCTCATTTGGGTACATAACGAGAAGACCTAAGAAAATTTTTTTCTGCCTCAACATGAACTATTT                    ]
[+] EMBL BM421941             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTGTNGGATTTCT TTTTGGAGGAGTACCGTAAGTCTTACTTTCGGTGTTGCACCT GCCTTGCAATATTGGCCCTTGGTGTGCTTA CCTTAAGGTTTGGAGGAGTGGCAAGTCAAGCTTGCCATTCATACTGGCACAAGCAGCTGTTGCTGCTGCGGTAGCATGGAAGCACTTCCAGGCGTACACCACCNCACAAAGAAACTGCTTCCCCTGGGCTTTTTACACCTGCACTCAGTGCCGCTATGATCTGCTTCTACTCATATGTGCTACTTGCTGGGGGGAATCCCCCCCCACAAGAAGAAGGCAGCAGTTGCTCAATAAGTC GTGTCCTTTCGTGTTATCATAGTTGTACTGATATAGGAATGTGTTTGCTTTTTTTTCCCTTTCTTTTCCATTGGTGAACAGCGAAAAGAATAAGTTGTATTCTACCTTAGCTCATTTGGGTACATAACGAGAAGACCTAAGAAAATTTTTTTCTGCCTCAACATGAACTATTTTTTCCTGGACAAAAAAAAAA]
[+] EMBL AU172646             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGTCTTACTTTCGGTGTTGCACCTGGCCTTGCAATATTGGCCCTTGGTGTGCTTAGCCTTAAGGTTTGGAGGAGTGGCAAGTCAAGCTTGCCATTCATACTGGCACAAGCAGCTGTTGCTGCTGCGGTAGCATGGAAGCACTTCCAGGCGTACACCAC  AACAAAGAAACTGCTT CCCTGGGCTTTTTACA CTGCACTCAGTGCCGCTATGATCTGCTTCTACTCATATGTGCTACTTGCTGGGGGGAATCCACCACCA AAGAAGAAGGCAGCAGTTGCTCAATAAGTCGGTGTCCTTTCGTGTTATCATAGTTGTACTGATATAGGAATGTGTTTGCTTTTTTTTCCCTTTCTTTTCCATTGGTGAACAGCGAAAAGAATAAGTTGTATTCTACCTTAGCTCATTTGGGTACATAACGAGAAGACCTAAGAAAAA                                               ]
[+] EMBL AU183103             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AACTGCTT CCCTGGGCTTTTTACN CTGCACTCAGTGCCGCTATGATCTGCTTCTACTCATATGTGCTACTTGCTGGGGGGAATCCNCCNCCA AAGAAGAAGGCAGCAGTTGCTCAATAAGTC GTGTCCTTTCGTGTTATCATAGTTGTACTGATATAGGAATGTGTTTGCTTTTTTTTCCCTTTCTTTTCCATTGGTGAACAGCGAAAAGAATAAGTTGTATTCTACCTTAGCTCATTTGGGTACATAACGAGAAGACCTAAGAAAAA                                               ]


>consensus_14836#0 GAGAGAGAGAGAGAGAGAGAGAGAGGCAGGAGAGTAGGAGACAGAAGGAGAGTTAGCCGC CGAGCACGACGACTCCTCCCTCTCCTCTCCCCTTCCGGCTTCCACGCGTCGGGAACCGAA GTCCAAACCGAGAGAACATCGACATGGCGGCGGCGGTGGCGGCGCANTCCGCGGGCCCTC GGCGGCGGCGGCGAGGAGGTGGCCGGCCCCCTCCGGCGGCGTCCTCCGCTTCGCGCCGCT CGCTACGTCGACGGTCCCGGCGTCGATCGCCCGGGGATCGCTCCGGGGGTTCCCGCTGGC GTCGTGCTGCCCAAGCCATTGATAGCAATGTGCATGAAGGCGGAGTATACCAGCAGTCCT GTTGATCCTAATGCTGTCGCGGAGCATACAGAAGATGAAAATCAACAGCCAACCACTGTA TCGCCTACTAATGCAGAAATAGACATAGACCAAGAGGCTGTTCCTCAACACAAGGGTGCA ATAATACATGACTTTTGCCTAGGGATCCCTTTTGGTGGAATTTTATTTTCCATGGGCCTT GTTGGATTTCTGTTTTGGAGGAGTACCGTAAGTCTTACTTTCGGTGTTGCACCTGGCCTT GCAATATTGGCCCTTGGTGTGCTTAGCCTTAAGGTTTGGAGGAGTGGCAAGTCAAGCTTG CCATTCATACTGGCACAAGCAGCTGTTGCTGCTGCGGTAGCATGGAAGCACTTCCAGGCG TACACCACAACAAAGAAACTGCTTCCCTGGGCTTTTTACACTGCACTCAGTGCCGCTATG ATCTGCTTCTACTCATATGTGCTACTTGCTGGGGGGAATCCACCACCAAAGAAGAAGGCA GCAGTTGCTCAATAAGTCGTGTCCTTTCGTGTTATCATAGTTGTACTGATATAGGAATGT GTTTGCTTTTTTTTCCCTTTCTTTTCCATTGGTGAACAGCGAAAAGAATAAGTTGTATTC TACCTTAGCTCATTTGGGTACATAACGAGAAGACCTAAGAAAAATTTTTTCTGCCTCAAC ATGAACTATTTTTTCCTGGACAAAAAAAAAA



consensusID : consensus_14836#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 510
fasta sequence
                              [TTCCATGGGCCTTGTTGGATTTCTGTTTTGGAGGAGTACCGTAAGTCTTACTTTCGGTGTTGCACCTGGCCTTGCAATATTGGCCCTTGGTGTGCTTAGCCTTAAGGTTTGGAGGAGTGGCAAGTCAAGCTTGCCATTCATACTGGCACAAGCAGCTGTTGCTGCTGCGGTAGCATGGAAGCACTTCCAGGCGTACACCACAACAAAGAAACTGCTTCCCTGGGCTTTTTACACTGCACTCAGTGCCGCTATGATCTGCTTCTACTCATATGTGCTACTTGCTGGGGGGAATCCACCACCAAAGAAGAAGGCAGCAGTTGCTCAATAAGTCGTGTCCTTTCGTGTTATCATAGTTGTACTGATATAGGAATGTGTTTGCTTTTTTTTCCCTTTCTTTTCCATTGGTGAACAGCGAAAAGAATAAGTTGTATTCTACCTTAGCTCATTTGGGTACATAACGAGAAGACCTAAGAAAATTTTTTTCTGCCTCAAAAAAAAAAAAAAAAACTC]

[-] EMBL CF302984             [TTCCATGGGCCTTGTTGGATTTCTGTTTTGGAGGAGTACCGTAAGTCTTACTTTCGGTGTTGCACCTGGCCTTGCAATATTGGCCCTTGGTGTGCTTAGCCTTAAGGTTTGGAGGAGTGGCAAGTCAAGCTTGCCATTCATACTGGCACAAGCAGCTGTTGCTGCTGCGGTAGCATGGAAGCACTTCCAGGCGTACACCACAACAAAGAAACTGCTTCCCTGGGCTTTTTACACTGCACTCAGTGCCGCTATGATCTGCTTCTACTCATATGTGCTACTTGCTGGGGGGAATCCACCACCAAAGAAGAAGGCAGCAGTTGCTCAATAAGTCGTGTCCTTTCGTGTTATCATAGTTGTACTGATATAGGAATGTGTTTGCTTTTTTTTCCCTTTCTTTTCCATTGGTGAACAGCGAAAAGAATAAGTTGTATTCTACCTTAGCTCATTTGGGTACATAACGAGAAGACCTAAGAAAATTTTTTTCTGCCTCAAAAAAAAAAAAAAAAACTC]
[+] EMBL AU075432             [                                                                                                                                                                                                                           CTGGGCTTTTTACACTGCACTCAGTGCCGCTATGATCTGCTTCTACTCATATGTGCTACTTGCTGGGGGGAATCCACCACCAAAGAAGAAGGCAGCAGTTGCTCAATAAGTCGTGTCCTTTCGTGTTATCATAGTTGTACTGATATAGGAATGTGTTTGCTTTTTTTTCCCTTTCTTTTCCATTGGTGAACAGCGAAAAGAATAAGTTGTATTCTACCTTAGCTCATTTGGGTACATAACGAGAAGACCTAAGAAAATTTTTTTCTGNNTCAAAAAAAA            ]


>consensus_14836#1 TTCCATGGGCCTTGTTGGATTTCTGTTTTGGAGGAGTACCGTAAGTCTTACTTTCGGTGT TGCACCTGGCCTTGCAATATTGGCCCTTGGTGTGCTTAGCCTTAAGGTTTGGAGGAGTGG CAAGTCAAGCTTGCCATTCATACTGGCACAAGCAGCTGTTGCTGCTGCGGTAGCATGGAA GCACTTCCAGGCGTACACCACAACAAAGAAACTGCTTCCCTGGGCTTTTTACACTGCACT CAGTGCCGCTATGATCTGCTTCTACTCATATGTGCTACTTGCTGGGGGGAATCCACCACC AAAGAAGAAGGCAGCAGTTGCTCAATAAGTCGTGTCCTTTCGTGTTATCATAGTTGTACT GATATAGGAATGTGTTTGCTTTTTTTTCCCTTTCTTTTCCATTGGTGAACAGCGAAAAGA ATAAGTTGTATTCTACCTTAGCTCATTTGGGTACATAACGAGAAGACCTAAGAAAATTTT TTTCTGCCTCAAAAAAAAAAAAAAAAACTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14836#0      GAGAGAGAGAGAGAGAGAGAGAGAGGCAGGAGAGTAGGAGACAGAAGGAGAGTTAGCCGC 60
consensus_14836#1      ------------------------------------------------------------
                                                                                   

consensus_14836#0      CGAGCACGACGACTCCTCCCTCTCCTCTCCCCTTCCGGCTTCCACGCGTCGGGAACCGAA 120
consensus_14836#1      ------------------------------------------------------------
                                                                                   

consensus_14836#0      GTCCAAACCGAGAGAACATCGACATGGCGGCGGCGGTGGCGGCGCANTCCGCGGGCCCTC 180
consensus_14836#1      ------------------------------------------------------------
                                                                                   

consensus_14836#0      GGCGGCGGCGGCGAGGAGGTGGCCGGCCCCCTCCGGCGGCGTCCTCCGCTTCGCGCCGCT 240
consensus_14836#1      ------------------------------------------------------------
                                                                                   

consensus_14836#0      CGCTACGTCGACGGTCCCGGCGTCGATCGCCCGGGGATCGCTCCGGGGGTTCCCGCTGGC 300
consensus_14836#1      ------------------------------------------------------------
                                                                                   

consensus_14836#0      GTCGTGCTGCCCAAGCCATTGATAGCAATGTGCATGAAGGCGGAGTATACCAGCAGTCCT 360
consensus_14836#1      ------------------------------------------------------------
                                                                                   

consensus_14836#0      GTTGATCCTAATGCTGTCGCGGAGCATACAGAAGATGAAAATCAACAGCCAACCACTGTA 420
consensus_14836#1      ------------------------------------------------------------
                                                                                   

consensus_14836#0      TCGCCTACTAATGCAGAAATAGACATAGACCAAGAGGCTGTTCCTCAACACAAGGGTGCA 480
consensus_14836#1      ------------------------------------------------------------
                                                                                   

consensus_14836#0      ATAATACATGACTTTTGCCTAGGGATCCCTTTTGGTGGAATTTTATTTTCCATGGGCCTT 540
consensus_14836#1      -----------------------------------------------TTCCATGGGCCTT 13
                                                                      *************

consensus_14836#0      GTTGGATTTCTGTTTTGGAGGAGTACCGTAAGTCTTACTTTCGGTGTTGCACCTGGCCTT 600
consensus_14836#1      GTTGGATTTCTGTTTTGGAGGAGTACCGTAAGTCTTACTTTCGGTGTTGCACCTGGCCTT 73
                       ************************************************************

consensus_14836#0      GCAATATTGGCCCTTGGTGTGCTTAGCCTTAAGGTTTGGAGGAGTGGCAAGTCAAGCTTG 660
consensus_14836#1      GCAATATTGGCCCTTGGTGTGCTTAGCCTTAAGGTTTGGAGGAGTGGCAAGTCAAGCTTG 133
                       ************************************************************

consensus_14836#0      CCATTCATACTGGCACAAGCAGCTGTTGCTGCTGCGGTAGCATGGAAGCACTTCCAGGCG 720
consensus_14836#1      CCATTCATACTGGCACAAGCAGCTGTTGCTGCTGCGGTAGCATGGAAGCACTTCCAGGCG 193
                       ************************************************************

consensus_14836#0      TACACCACAACAAAGAAACTGCTTCCCTGGGCTTTTTACACTGCACTCAGTGCCGCTATG 780
consensus_14836#1      TACACCACAACAAAGAAACTGCTTCCCTGGGCTTTTTACACTGCACTCAGTGCCGCTATG 253
                       ************************************************************

consensus_14836#0      ATCTGCTTCTACTCATATGTGCTACTTGCTGGGGGGAATCCACCACCAAAGAAGAAGGCA 840
consensus_14836#1      ATCTGCTTCTACTCATATGTGCTACTTGCTGGGGGGAATCCACCACCAAAGAAGAAGGCA 313
                       ************************************************************

consensus_14836#0      GCAGTTGCTCAATAAGTCGTGTCCTTTCGTGTTATCATAGTTGTACTGATATAGGAATGT 900
consensus_14836#1      GCAGTTGCTCAATAAGTCGTGTCCTTTCGTGTTATCATAGTTGTACTGATATAGGAATGT 373
                       ************************************************************

consensus_14836#0      GTTTGCTTTTTTTTCCCTTTCTTTTCCATTGGTGAACAGCGAAAAGAATAAGTTGTATTC 960
consensus_14836#1      GTTTGCTTTTTTTTCCCTTTCTTTTCCATTGGTGAACAGCGAAAAGAATAAGTTGTATTC 433
                       ************************************************************

consensus_14836#0      TACCTTAGCTCATTTGGGTACATAACGAGAAGACCTAAGAAAAATTTTTTCTGCCTCAAC 1020
consensus_14836#1      TACCTTAGCTCATTTGGGTACATAACGAGAAGACCTAAGAAAATTTTTTTCTGCCTCAAA 493
                       ******************************************* *************** 

consensus_14836#0      ATGAACTATTTTTTCCTGGACAAAAAAAAAA 1051
consensus_14836#1      AAAAAAAAAAAAAACTC-------------- 510
                       *  **  *      *                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)