These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14840#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 663 fasta sequence [TTTTTTCNTTTTTTTTTNTTNTTTCCCCTTTTTTTTTTTTTACGAAAGATGCTCA-TTAATTTCCCAGATTCT-GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGAC] [-] EMBL AU070930 [TTTTTTCNTTTTTTTTTNTTNTTTCCCCTTTTTTTTTTTTTACGAAAGATGCTCA TTAATTTCCCAGATTCT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCAT ] [-] EMBL CB685755 [ tggTTTTCTGTAGTGTACGAAAGATGCTCA TTAATTTCCCAGATTCT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTATTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTGTGCTTCGCCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGGGGCC ] [-] EMBL BM419747 [ TTTTTTTTTTACGAAAGATGCTCA TTAATTTCCCAGATACT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACNGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAcgg ] [+] EMBL CF311133 [ TTTTTTGTACGAAAGATGCTCA TTAATTTCCCAGATTCT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGA ACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATT ] [-] EMBL AU166299 [ TTTTTGTACGAAAGATGCTCA TTAATTTCCCAGATTCT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCT ] [+] EMBL CF280446 [ TTTTACGAAAGATGCTCA TTAATTTCCCAGATTCT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTTCTTATATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCA TTTTTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGAT ] [-] EMBL AU070745 [ AAAGATGCTCATTTAATTTCCCAGATTCTGGGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCAT ] [+] EMBL CB633657 [ AAGATGCTCA TTAATTTCCCAGATACC GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGA ] [+] EMBL CB649237 [ AGATGCTCA TTAATTTCCCAGCCTCT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGA ] [-] EMBL AK060032 [ TGCTCA TTAATTTCCCAGATTCT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGAC] [+] EMBL CB626850 [ CTCA TTAATTTCCCAGATACT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGA ] [+] EMBL BI118675 [ ACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGA ] [-] EMBL AA754581 [ AAAAGATCGGT GTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTAGCTTCGGCCNTGGTGCTCTCCACCCATTNGGCATNGATCCTCACTCTCTNGATGNTCNGCTTCACCGTCCTCGCGATGTNGGCTTTCGTCNTGCTCTGGAAGAANTCNTCNGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGNTGCACCGACTCNTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGAC] [-] EMBL AA750407 [ GAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCT CCTCAGGTGAC] consensusID : consensus_14840#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 505 fasta sequence [TTTTTTTTTTGGCATCTATCAAACTGACATAACCGGGAGAAACGGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTGGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGGGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTAGCCTCGGCCCGTGGGGCTCTCCACCCATTGGGCATTGATCCTCACTCTCTCGATGCTCGGGTTCACCGTCCTCGCGATGTTGGCCTTCGTCCGGGCTCTGTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGGTGCGCAGCGGGTGAGACGGGGGGGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGGGTCTGAAAGGTAGTCCCACTTTTCCTTCAACCAGGTCCAGGCACCTCAGTGTCCCGTGTGACCGACTCCTCTAAGCAAAAATATAGAGTCCTG] [-] EMBL BI812006 [TTTTTTTTTTGGCATCTATCAAACTGACATAACCGGGAGAAACGGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTGGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGGGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTAGCCTCGGCCCGTGGGGCTCTCCACCCATTGGGCATTGATCCTCACTCTCTCGATGCTCGGGTTCACCGTCCTCGCGATGTTGGCCTTCGTCCGGGCTCTGTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGGTGCGCAGCGGGTGAGACGGGGGGGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGGGTCTGAAAGGTAGTCCCACTTTTCCTTCAACCAGGTCCAGGCACCTCAGTGTCCCGTGTGACCGACTCCTCTAAGCAAAAATATAGAGTCCTG] consensusID : consensus_14840#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 501 fasta sequence [TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCTCTCACTAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACAGGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAAAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAACGGTGAGACGGTGGTGGAAACAAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGA] [+] EMBL CB679711 [TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCTCTCACTAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACAGGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAAAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAACGGTGAGACGGTGGTGGAAACAAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGA] consensusID : consensus_14840#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 486 fasta sequence [TTTTTTTTTTTTTTAACCTGGAGAAACGGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGTGACGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCC] [-] EMBL BI812087 [TTTTTTTTTTTTTTAACCTGGAGAAACGGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGTGACGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCC] consensusID : consensus_14840#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 466 fasta sequence [TTTTTTTTTTGGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACATGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGGTCCTCGGCGATGTTGGCCTTCGGTCCGTGGCTCTTGAAGAACTCCTCCGGCGATCGTCGCCCATTTCATCGGGTGCGCAGCGGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAAGCCATGTCCATGCCACCTCATGTCCCGGTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCAGNCTACAGGTGACAGCA] [-] EMBL BQ908130 [TTTTTTTTTTGGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACATGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGGTCCTCGGCGATGTTGGCCTTCGGTCCGTGGCTCTTGAAGAACTCCTCCGGCGATCGTCGCCCATTTCATCGGGTGCGCAGCGGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAAGCCATGTCCATGCCACCTCATGTCCCGGTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCAGNCTACAGGTGACAGCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14840#1 ------------------------------------------------------------ consensus_14840#3 ------------------------------------------------------------ consensus_14840#0 TTTTTTCNTTTTTTTTTNTTNTTTCCCCTTTTTTTTTTTTTACGAAAGATGCTCATTAAT 60 consensus_14840#2 ------------------------------------------------------------ consensus_14840#4 ------------------------------------------------------------ consensus_14840#1 ------------------------------------------------------------ consensus_14840#3 ------------------------------------------------------------ consensus_14840#0 TTCCCAGATTCTGGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGG 120 consensus_14840#2 ------------------------------------------------------------ consensus_14840#4 ------------------------------------------------------------ consensus_14840#1 ------------------------TTTTTTTTTTGGCATCTATCAAACTGACATAACCGG 36 consensus_14840#3 ----------------------------------------TTTTTTTTTTTTTTAACCTG 20 consensus_14840#0 ATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTG 180 consensus_14840#2 -----------------------------------------TCTCTCTCTCTCTCTCTCT 19 consensus_14840#4 ------------------------------------------------------------ consensus_14840#1 GAGAAACGGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAA 96 consensus_14840#3 GAGAAACGGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAA 80 consensus_14840#0 GAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAA 240 consensus_14840#2 CTCTCTCTCTCTCTCTCACTCTCTCACTAGGGGCATGCAACAGGTCGTCTAACCCACCAA 79 consensus_14840#4 -------------------------------TTTTTTTTTTGGGTCGTCTAACCCACCAA 29 * ****************** consensus_14840#1 GTTCTTATTACTAACTGGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCA 156 consensus_14840#3 GTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCA 140 consensus_14840#0 GTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCA 300 consensus_14840#2 GTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACAGGCTAAGACAACGGCGCA 139 consensus_14840#4 GTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCA 89 **************** ************************* ***************** consensus_14840#1 GGAAAAGATCGGTCGTCTCAGGGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTA 216 consensus_14840#3 GGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTA 200 consensus_14840#0 GGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTA 360 consensus_14840#2 GGAAAAGATCGGTCGTCTCAGTGGTCGTGAAAAATTTCCTTGAGGACATTGCCCAGGTTA 199 consensus_14840#4 GGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACAT-GCCCAGGTTA 148 ********************* ******** ********** ******* ********** consensus_14840#1 GCCTCGGCCCGTGGGGCTCTCCACCCATTGGGCATTGATCCTCACTCTCTCGATGCTCGG 276 consensus_14840#3 GCCTCGGCCC-TGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTG 259 consensus_14840#0 GCCTCGGCCC-TGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTG 419 consensus_14840#2 GCCTCGGCCC-TGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTG 258 consensus_14840#4 GCCTCGGCCC-TGGTGCTCTCCACCCATT-GGCATTGATCCTCACTCTCTCGATGCTCTG 206 ********** *** ************** **************************** * consensus_14840#1 GTTCACCG-TCCTCG-CGATGTTGGCCTTCGTCCGGG--CTCTGTGAAGAACTCCTCCGC 332 consensus_14840#3 CTTCACCG-TCCTCG-CGATGTTGGCCTTCGTCCTG---CTCT-TGAAGAACTCCTCCGC 313 consensus_14840#0 CTTCACCG-TCCTCG-CGATGTTGGCCTTCGTCCTG---CTCT-TGAAGAACTCCTCCGC 473 consensus_14840#2 CTTCACCG-TCCTCG-CGATGTTGGCCTTCGTCCTG---CTCT-TGAAGAACTCCTCCGC 312 consensus_14840#4 CTTCACCGGTCCTCGGCGATGTTGGCCTTCGGTCCGTGGCTCT-TGAAGAACTCCTCCGG 265 ******* ****** *************** * * **** *************** consensus_14840#1 --GTCGTCGCCCATTTCATCGGGTGCGCAGCGGGTGAGACGGGGGGGGAAACGAAATAGG 390 consensus_14840#3 --GTCGTCGCCCATTTCATCGG-TGCGCAGCGG-TGAGACGGTGGTGGAAACGAAATAGG 369 consensus_14840#0 --GTCGTCGCCCATTTCATCGG-TGCGCAGCGG-TGAGACGGTGGTGGAAACGAAATAGG 529 consensus_14840#2 --GTCGTCGCCCATTTCATCGG-TGCGCAACGG-TGAGACGGTGGTGGAAACAAAATAGG 368 consensus_14840#4 CGATCGTCGCCCATTTCATCGGGTGCGCAGCGGGTGAGACGGTGGTGGAAACGAAATAGG 325 ******************* ****** *** ******** ** ****** ******* consensus_14840#1 TGAGAAGAGTTCCAGAGAAGGGGTCTGAAAGGTAGTCCCACTTTTCCTTCAA-CCAGGTC 449 consensus_14840#3 TGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAA-CCATGTC 428 consensus_14840#0 TGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAA-CCATGTC 588 consensus_14840#2 TGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAA-CCATGTC 427 consensus_14840#4 TGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAAGCCATGTC 385 ********************* ******** ********************* *** *** consensus_14840#1 CAGGCACCTCAGTGTCCCGTGTGACCGACTCCTCTAAGCAAAAATATAGAGTCCTG---- 505 consensus_14840#3 CATGCCACCTCATGTCCCGTGA---CGACTCCTCTAAGCAAAAATATAGAGTCCTGATTC 485 consensus_14840#0 CATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTC 648 consensus_14840#2 CATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTC 487 consensus_14840#4 CATGCCACCTCATGTCCCGGTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTC 445 ** ** * ******* ******************************* consensus_14840#1 --------------------- consensus_14840#3 C-------------------- 486 consensus_14840#0 CTCACCTCAGGTGAC------ 663 consensus_14840#2 CTCACCT--CAGGTGA----- 501 consensus_14840#4 CTCAGNCTACAGGTGACAGCA 466 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||