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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14862#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 2281 fasta sequence
[TTTTTTTTGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAATCTGTACCAATCAAATTGAAAATTTCTGCTCCTTTTACAGCAACATTATCAAGGCATATTATACATCAATAACAATAAATACAATAACTAGAATATGAATGACGATCAAACATGCACAAGGAATAAACAAACGGTTGTAAATA-CAATCGACCATTTGTATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGAGGCAATACCCAGAAGCTAGATGACCAGTCAAAGAAAGAGATGCCATATAGCACAAAACAAAG-AAATGTCATCAGAATTTATGCTAAGGTT----GGG-TTTTCTTCTTCAGCAGACCACCAAATTTCTTCAGCAAGGGCTTCTTCTTTTGCGGCTGCTGCTTGG-GCGGTG-ATGCGTTGCCATTGCTCGCCGTCG-TGGAGTGCAAACCATTGCCATCAACAATGGAATCTCCCGTGTTGGACTCTAAATCAACTTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACCTT-GC-TGTTCTCCCACATCTTTGCAA-CTACCATTA-CCGGTT-CATCATCCTCGC-TGCCCCCCT-TGACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTTGCATTTGCAAGCACGGAGAGCTCCTTTATCTTCTCAGAAGCAACAAGTTCCTTTGCTTGCAAATCATCGTTCTCTTGTTTTATGTTCTGCAACTCATTTTCTTTGTCTAGTAGCTTTTCCTTCCACTGGAAGGTCTCGGCCTTGGCTTCCTCGCATGTTTTGTTAGCTTCCATTAGCTGAGCTTCAAGATGCTTCAACTTCTCCTGTAACTCAGCATTTTCACTTTCTTTGCCTTTTACAGCCTCCAAGGTCTTGTCCATCTGAGCTCTGGCGTTGATGATTTCTTCTTCTGATTTTTTAATTGAGTTAACAAAACTTAGCTCTTTGGACTGCCATTCCTCAGACGCACTCTTGGTTTCTGCTTCCATTCTCTCAACTGACTTCTTGAGACAAACTTTTTCATAGTTTGCTTCGTCAAGCATTACCTCATAGCTCTCCTTTGTATTCTGCAGACTTACATTGAGCTCCTCTACCTGTGCACGAGCACGATCAATCTCCTCTTGTTTATCTAGGTACTTCTCCTGCGCCACTCTCAGTTGAGCTGACATTTCGTGCAAAGCAGAGGCTTGACCCTCCATGGCCTTCTTAATCTTCTCAACTTCAGCTTTGCTAGCTTCAAGTTCCTTGGCTAGCATGTTCTTCTGTTCAATCAGGGTTTCCATTTCTGAACTGGCAATCTTGTCATTGTTAAGGTCTTCTTCCGCCGCTTCGAGCTTCAACCTAAGGTCTTCTATCTCCAACCTTAATTCATCAGCTTCCTTATCAGCAGTATGAAAATCTTCTTTCTGCTTGGCTACTTCATCCTCCAAAGACCTGACCTTATCCTGAAGTGCTTCGATTTCAGATTCTTTTTCTTGGAGCAGAGTCATTTTTGCATCCAATTCTTTCATTGCTGATTCTAAGGACTCGCCCTTGAGAATGTTAGACTGATCAGCTTCCTCCAACCTGACCTCCAATTCCAGTGCTTTTGTCTTCCATTTGCCAAGTAACTCCTCTGACCTCGCGCGCGCCTTCTTAACATCAGCGATTTCAACTTCAAGCTGTTCAACCACACCTTCCAATTCAACTGCCCTCTGCTCAGCGACATTTGCTTTCTCAAGCTCAAGCTTCAATCCAGAGTTCTCTTCTTCAAGCTTCCTAATGTGCTCCACAGCACCTTTTGACGAGCTCCCTACCTCGGAATCAAGCAGCCCTTTGAGATGCGCCACCTCCGCATTGAGGAGCTTGATCTTCTCGGCATTCTCATCTGAAGCCCTCATGGCATCAGGTGCCTGGGTAAGCGCCGCGTTCTTGGCATCGATTGCATCCGCTAGCTCATACCTGGCCTGCTCAAGCTGCTCCACCGTCGAACGCAGTGCGGCCATGTCAGCCTCCTGCTGGCTCTGCATGCTCGCCAGCTTCGTCCGCAGCTCGTCCTCCATGCTCGCGCTCGCCTGCTCCGCTTCGGCATCGCCGGACTGCTCCGCCGCCGACTCCTCCGCCGCCTTGCTCTGCGCAGCGAGCGCCTCCTGGAGCTTCGCATTGGCCTCATCAGCCGCCCTCTTGGCACGCTCCAGTTCATCCAGGACTTTCCCCCTCTCCTTCTCCTTCTCCACCAACTCCTCCTTGGCCTTCACGAGCTCCTGC]
[-] EMBL AT003658 [TTTTTTTTGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAATCTGTACCAATCAAATTGAAAATTTCTGCTCCTTTTACAGCAACATTATCAAGGCATATTATACATCAATAACAATAAATACAATAACTAGAATATGAATGACGATCAAACATGCACAAGGAATAAACAAACGGTTGTAAATA CAATCGACCATTTGTATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGAGGCAATACCCAGAAGCTAGATGACCAGTCAAAGAAAGAGATGCCATATAGCACAAAACAAAG AAATGTCATCAGAATTTATGCTAAGGTT GGG TTTTCTTCTTCAGCAGACCACCAAATTTCTTCAGCAAGGGCTTCTTCTTTTGCGGCTGCTGCTTGG GCGGTG ATGCGTTGCCATTGCTCGCCGTCG TGGAGTGCAAACCATTGCCATCAACAATGGAATCTCCCGTGTTGGACTCTAAATCAACTTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACCTT GC TGTTCTCCCACATCTTTGCAA CTACCATTACCCGGTT C ]
[-] EMBL AT003484 [TTTTTTTTGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAAGCTGTACCAATCAAATTGAAAATTTCTGCTCCTTTTACAGCAACATTATCAAGGCATATTATACATCAATAACAATAAATACAATAACTAGAATATGAATGACGATCAAACATGCACAAGGAATAAACAAACGGTTGTAAATA CAATCGACCATTTGTATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGAGGCAATACCCAGAAGCTAGATGACCAGTCAAAGAAAGAGATGCCATATAGCACAAAACAAAGAAAATGTCATCAGAATTTATG TAAGGTTTGGGGGGTTTTTCTTCTTCAGCAGACCACCAAATTTCTTCAGCANGGGCTTCTTCTTTTGCGGNTGCTG TTGGNCCGGNGAANGCCGTGCC TNG TGGCCNGCGNNGGAGTGC AACCA TGGCAT AACAngga ]
[-] EMBL AT003508 [TTTTTTTTGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAATCTGTACCAATCAAATTGAAAATTTCTGCTCCTTTTACAGCAACATTATCAAGGCATATTATACATCAATAACAATAAATACAATAACTAGAATATGAATGACGATCAAACATGCACAAGGAATAAACAAACGGTTGTAAATA CAATCGACCATTTGTATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGAGGCAATACCCAGAAGCTAGATGACCAGTCAAAGAAAGAGATGCCATATAGCACAAAACAAAG AAATGTCATCAGAATTTATGCTAAGGTT GGG TTTTCTTCTTCAGCAGACCACCAAATTTCTTCAGCAAGGGCTTCTTCTTTTGCGGCTGCTGCTTGG GCGGTG ATGCGTTGCCATTGCTCGCCGTCG TGGAGTGCAAACCATTGCCATCAACAATGGAATCTCCCGTGTTGGACTCTAAATCAACTTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACCTT GC TGTTCTCCCACATCTTTGCAA CTACCATTA CCGGGT CATCATCCTCGC TGC ]
[-] EMBL AT003731 [TTTTTTTTGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAATCTGTACCAATCAAATTGAAAATTTCTGCTCCTTTTACAGCAACATTATCAAGGCATATTATACATCAATAACAATAAATACAATAACTAGAATATGAATGACGATCAAACATGCACAAGGAATAAACAAACGGTTGTAAATA CAATCGACCATTTGTATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGAGGCAATACCCAGAAGCTAGATGACCAGTCAAAGAAAGAGATGCCATATAGCACAAAACAAAG AAATGTCATCAGAATTTATGCTAAGGTT GGG TTTTNTTCTTCAGCAGACCACCAAATTTCTTCAGNANGGGCTTNTTCTTTTGCGGCTGCTGCTTGG GCGGTG ATGCGTTGCCATTGCTCGCCGTCG NGGAGTGCAAACCATTGCCATCAACAATGGAATCTCCCGTGTTGGACTCTAAATCAACTTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACCTT GC TGGTCTCCCACATNTTTGCAA CTACCATTA CCGGGT CATC ]
[+] EMBL CB631874 [ tataAAAATTTCTGCTCCTTTTACAGCAACACCCTCAAGGGATATTATACATCAATAACAATAAATACAATAACTATAATATGAATGACGATCAAACATGCACAAGGAATAAACAAACGGTTGTAAATA CAATCGACCATTTGGATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGAGGCAATACCCAGAATCTACATGACCAGTCAAAGAAAGATATGCCATATATCACAAAACAAAG AAATGTCATCATAATTTATGCTAAGGTT GGG TTTTCTTCTTCAACAAACCACCAAATTTCTTCAGCAAGGGCTTCTTCTTTTGTGGCTGCTGCTTGG GCGGTG ATACGTTGCCATTGCTCCCCGTCG TGGACTGCAAACCATTGCCATCAACAATGGAATCTCCCGAGTTGGACTCTAAATCAACTTCTGATTCACCATCGATTCCCTTCTCCTTAGATGAGGCATCATCAGTAACCTT GC TGTTCTCCCACATCTTTGCAA CTACCATTA ACGGTT CATCATCCTCAC TGACCCCCT TGACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTTGCATTTGCAAGCACGGAGAGCTCCTTTATCTTCTCATAAGCAACAAGTTCCTTTGCTTGCAAATCATCGTTCTCTTGATTTATGGTCTGCAACTCATTTTCTTTGTCTAG ]
[+] EMBL CB631910 [ TGCTCCTTTTACAGCAACATTATCAAGGCATATTATACATCAATAACAATAAATACAATAACTAGAATATGAATGACGATCAAACATGCACAAGGAATAAACAAACGGTTGTAAATA CAATCGACCATTTGTATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGAGGCAATACCCAGAAGCTAGATGACCAGTCAAAGAAAGAGATGCCATATAGCACAAAACAAAG AAATGTCATCAGAATTTATGCTAAGGTT GGG TTTTCTTCTTCAGCAGACCACCAAATTTCTTCAGCAAGGGCTTCTTCTTTTGTGGCTGCTGCTTGG GCGGTG ATGCGTTGCCATTGCTCGCCGTCG TGGACTGCAAACCATTGCCATCAACAATGGAATCTCCCGTGTTGGACTCTAAATCAACTTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACCTT GC TGTTCTCCCACATC ]
[-] EMBL BI801284 [ tttTTTTAAATATCAATCGACCATTGGTATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGAGG AATACCCAGAAGCTAGATGACCAGTCAAAGAAAGAGATGCCATATAGCACAAAACAAAG AAATGTCATCAGAATTTATGCTAAGG T GGG TTTTCTTCTTCAGCAGACCACCAAATTTCTTCAGCAAGGGCTTCTTC TTTGTGGCTGCTGCTTGG GCGGTG ATGCG TGCCA TG TCGCCGTCG TGGACTG AAACCATTG CATCAACAATGGAATCTCCCGTG TGGACTCTAAATCAACTTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACCTTGGCGTGTTCTCCCACATCTTGGCAACCTACCATTA CCGGTTACATCATCCTCGCGTGTCCCCCTGTGACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTGGCATTGGCAAGCACGGAGAGCTCCTTTATCTTCTCAGAAGC ACAAGTTAC TTGGTTGCAAATCAT ]
[+] EMBL CB621333 [ CCCCCT TGACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTTGCATTTGCAAGCACGGAGAGCTCCTTTATCTTCTCAGAAGCAACAAGTTCCTTTGCTTGCAAATCATCGTTCTCTTGTTTTATGTTCTGCAACTCATTTTCTTTGTCTAGTAGCTTTTCCTTCCACTGGAAGGTCTCGGCCTTGGCTTCCTCGCATGTTTTGTTAGCTTCCATTAGCTGAGCTTCAAGATGCTTCAACTTCTCCTGTAACTCAGCATTTTCACTTTCTTTGCCTTTTACAGCCTCCAAGGTCTTGTCCATCTGAGCTCTGGCGTTGATGATTTCTTCTTCTGATTTTTTAATTGAGTTAACAAAACTTAGCTCTTTGGACTGCCATTCCTCAGACGCACTCTTGGTTTCTGCTTCCATTCTCTCAACTGACTTCTTGAGACAA ]
[+] EMBL CB621318 [ CCCCCT TGACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTTGCATTTGCAAGCACGGAGAGCTCCTTTATCTTCTCAGAAGCAACAAGTTCCTTTGCTTGCAAATCATCGTTCTCTTGTTTTATGTTCTGCAACTCATTTTCTTTGTCTAGTAGCTTTTCCTTCCACTGGAAGGTCTCGGCCTTGGCTTCCTCGCATGTTTTGTTAGCTTCCATTAGCTGAGCTTCAAGATGCTTCAACTTCTCCTGTAACTCAGCATTTTCACTTTCTTTGCCTTTTACAGCCTCCAAGGTCTTGTCCATCTGAGCTCTGGCGTTGATGATTTCTTCTTCTGATTTTTTAATTGAGTTAACAAAACTTAGCTCTTTGGACTGCCATTCCTCAGACGCACTCTTGGTTTCTGCTTCCATTCTCTCAACTGACTTCTTGAGAC ]
[+] EMBL CB643971 [ CCCCCT TGACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTTGCATTTGCAAGCACGGAGAGCTCCTTTATCTTCTCAGAAGCAACAAGTTCCTTTGCTTGCAAATCATCGTTCTCTTGTTTTATGTTCTGCAACTCATTTTCTTTGTCTAGTAGCTTTTCCTTCCACTGGAAGGTCTCGG ]
[+] EMBL CB625726 [ CCCCCT TGACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTTGCATTTGCAAGCACGGAGAGCTCCTTTATCTTCTCAGAAGCAACAAGTTCCTTTGCTTGCAAATCATCGTTCTCTTGTTTTATGTTCTGCAACTCATTTTCTTTGTCTAGTAGCTTTT ]
[-] EMBL AK059702 [ CCCCT TGACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTTGCATTTGCAAGCACGGAGAGCTCCTTTATCTTCTCAGAAGCAACAAGTTCCTTTGCTTGCAAATCATCGTTCTCTTGTTTTATGTTCTGCAACTCATTTTCTTTGTCTAGTAGCTTTTCCTTCCACTGGAAGGTCTCGGCCTTGGCTTCCTCGCATGTTTTGTTAGCTTCCATTAGCTGAGCTTCAAGATGCTTCAACTTCTCCTGTAACTCAGCATTTTCACTTTCTTTGCCTTTTACAGCCTCCAAGGTCTTGTCCATCTGAGCTCTGGCGTTGATGATTTCTTCTTCTGATTTTTTAATTGAGTTAACAAAACTTAGCTCTTTGGACTGCCATTCCTCAGACGCACTCTTGGTTTCTGCTTCCATTCTCTCAACTGACTTCTTGAGGCAAACTTTTTCATAGTTTGCTTCGTCAAGCATTACCTCATAGCTCTCCTTTGTATTCTGCAGACTTACATTGAGCTCCTCTACCTGTGCACGAGCACGATCAATCTCCTCTTGTTTATCTAGGTACTTCTCCTGCGCCACTCTCAGTTGAGCTGACATTTCGTGCAAAGCAGAGGCTTGACCCTCCATGGCCTTCTTAATCTTCTCAACTTCAGCTTTGCTAGCTTCAAGTTCCTTGGCTAGCATGTTCTTCTGTTCAATCAGGGTTTCCATTTCTGAACTGGCAATCTTGTCATTGTTAAGGTCTTCTTCCGCCGCTTCGAGCTTCAACCTAAGGTCTTCTATCTCCAACCTTAATTCATCAGCTTCCTTATCAGCAGTATGAAAATCTTCTTTCTGCTTGGCTACTTCATCCTCCAAAGACCTGACCTTATCCTGAAGTGCTTCGATTTCAGATTCTTTTTCTTGGAGCAGAGTCATTTTTGCATCCAATTCTTTCATTGCTGATTCTAAGGACTCGCCCTTGAGA ]
[-] EMBL CB625725 [ TTGAGCTCCTCTACCTGTGCACGAGCACGGTCAATCTCCTCTTGTTTATCTAGGTACTTCTCCTGCGCCACTCTCAGTTGAGCTGACATTTCGTGCAAAGCAGAGGCTTGACCCTCCATGGCCTTCTTAATCTTCTCAACTTCAGCTTTGCTAGCTTCAAGTTCCTTGGCTAGCATGTTCTTCTGTTCAATCAGGGTTTCCATTTCTGAACTGGCAATCTTGTCATTGTTAAGGTCTTCTTCCGCCGCTTCGAGCTTCAACCTAAGGTCTTCTATCTCCAACCTTAATTCATCAGCTTCCTTATCAGCAGTATGAAAATCTTCTTTCTGCTTGGCTACTTCATCCTCCAAAGACCTGACCTTATCCTGAAGTGCTTCGATTTCAGATTCTTTTTCTTGGAGCAGAGTCATTTTTGCATCCAATTCTTTCATTGCTGATTCTAAGGACTCGCCCTTGAGAATGTTAGACTGATCAGCTTCCTCCAACCTGACCTCCAATTCCAGTGCTTTTGTCTTCCATTTGCCAAGTAACTCCTCTGACCTCGCGCGCGCCTTCTTAACATCAGCGATTTCAACTTCAAGCTGTTCAACCACACCTTCCAATTCAACTGCCCTCTGCTCAGCGACATTTGCTTTCTCAAGCTCAAGCTTCAATCCAGAGTTCTCTTCTTCAAGCTTCCTAATGTGCTCCACAGCACCTTTTGACGAGCTCCCTACCTCGGAATCAAGCAGCCCTTTGAGATGCGCCACCTCCGCATTGAGGAGCTTGATCTTCTCGGCATTCTCATCTGAAGCCCTCATGGCATCAGGTGCCTG ]
[-] EMBL CB621317 [ GGTACTTCTCNTGCGCCACTCTCAGTTGAGCTGACATTTCGTGCAAAGCAGAGGCTTGACCCTCCATGGCCTTCTTAATCTTCTCAACTTCAGCTTTGCTAGCTTCAAGTTCCTTGGCTAGCATGTTCTTCTGTTCAATCAGGGTTTCCATTTCTGAACTGGCAATCTTGTCATTGTTAAGGTCTTCTTCCGCCGCTTCGAGCTTCAACCTAAGGTCTTCTATCTCCAACCTTAATTCATCAGCTTCCTTATCAGCAGTATGAAAATCTTCTTTCTGCTTGGCTACTTCATCCTCCAAAGACCTGACCTTATCCTGAAGTGCTTCGATTTCAGATTCTTTTTCTTGGAGCAGAGTCATTTTTGCATCCAATTCTTTCATTGCTGATTCTAAGGACTCGCCCTTGAGAATGTTAGACTGATCAGCTTCCTCCAACCTGACCTCCAATTCCAGTGCTTTTGTCTTCCATTTGCCAAGTAACTCCTCTGACCTCGCGCGCGCCTTCTTAACATCAGCGATTTCAACTTCAAGCTGTTCAACCACACCTTCCAATTCAACTGCCCTCTGCTCAGCGACATTTGCTTTCTCAAGCTCAAGCTTCAATCCAGAGTTCTCTTCTTCAAGCTTCCTAATGTGCTCCACAGCACCTTTTGACGAGCTCCCTACCTCGGAATCAAGCAGCCCTTTGAGATGCGCCACCTCCGCATTGAGGAGCTTGATCTTCTCGGCATTATGATCT ]
[-] EMBL CB621332 [ CCTGCGCCACTCTCAGTTGAGCTGACATTTCGTGCAAAGCAGAGGCTTGACCCTCCATGGCCTTCTTAATCTTCTCAACTTCAGCTTTGCTAGCTTCAAGTTCCTTGGCTAGCATGTTCTTCTGTTCAATCAGGGTTTCCATTTCTGAACTGGCAATCTTGTCATTGTTAAGGTCTTCTTCCGCCGCTTCGAGCTTCAACCTAAGGTCTTCTATCTCCAACCTTAATTCATCAGCTTCCTTATCAGCAGTATGAAAATCTTCTTTCTGCTTGGCTACTTCATCCTCCAAAGACCTGACCTTATCCTGAAGTGCTTCGATTTCAGATTCTTTTTCTTGGAGCAGAGTCATTTTTGCATCCAATTCTTTCATTGCTGATTCTAAGGACTCGCCCTTGAGAATGTTAGACTGATCAGCTTCCTCCAACCTGACCTCCAATTCCAGTGCTTTTGTCTTCCATTTGCCAAGTAACTCCTCTGACCTCGCGCGCGCCTTCTTAACATCAGCGATTTCAACTTCAAGCTGTTCAACCACACCTTCCAATTCAACTGCCCTCTGCTCAGCGACATTTGCTTTCTCAAGCTCAAGCTTCAATCCAGAGTTCTCTTCTTCAAGCTTCCTAATGTGCTCCACAGCACCTTTTGACGAGCTCCCTACCTCGGAATCAAGCAGCCCTTTGAGATGCGCCACCTCCGCATTGAGGAGCTTGATCTTCTCGGCATTCTCATCT ]
[-] EMBL CB625782 [ AGTTGAGCTGACATNTCGTGCAAAGCAGAGGCTTGACCCTCCATGGCCTTCTTAATCTTCTCAACTTCAGCTTTGCTAGCTTCAAGTTCCTTGGCTAGCATGTTCTTCTGTTCAATCAGGGTTTCCATTTCTGAACTGGCAATCTTGTCATTGTTAAGGTCTTCTTCCGCCGCTTCGAGCTTCAACCTAAGGTCTTCTATCTCCAACCTTAATTCATCAGCTTCCTTATCAGCAGTATGAAAATCTTCTTTGTGGCCGGCTACTTCATCGTC ]
[+] EMBL AK107413 [ CTTTGCTAGCTTCAAGTTCCTTGGCTAGCATGTTCTTCTGTTCAATCAGGGTTTCCATTTCTGAACTGGCAATCTTGTCATTGTTAAGGTCTTCTTCCGCCGCTTCGAGCTTCAACCTAAGGTCTTCTATCTCCAACCTTAATTCATCAGCTTCCTTATCAGCAGTATGAAAATCTTCTTTCTGCTTGGCTACTTCATCCTCCAAAGACCTGACCTTATCCTGAAGTGCTTCGATTTCAGATTCTTTTTCTTGGAGCAGAGTCATTTTTGCATCCAATTCTTTCATTGCTGATTCTAAGGACTCGCCCTTGAGAATGTTAGACTGATCAGCTTCCTCCAACCTGACCTCCAATTCCAGTGTTTTTGTCTTCCATTTGCCAAGTAACTCCTCTGACCTCGCGCGCGCCTTCTTAACATCAGCGATTTCAACTTCAAGCTGTTCAACCACACCTTCCAATTCAACTGCCCTCTGCTCAGCGACATTTGCTTTCTCAAGCTCAAGCTTCAATCCAGAGTTCTCTTCTTCAAGCTTCCTAATGTGCTCCACAGCACCTTTTGACGAGCTCCCTACCTCGGAATCAAGCAGCCCTTTGAGATGCGCCACCTCCGCATCGAGGAGCTTGATCTTCTCGGCATTCTCATCTGAAGCCCTCATGGCATCATCTGCCTGGGTAAGCGCCGCGTTCTTGGCATCGATTGCATCCGCTAGCTCATACCTGGCCTGCTCAAGCTGCTCCACCGTCGAACGCAGTGCGGCCATGTCAGCCTCCTGCTGGCTCTGCATGCTCGCCAGCTTCGTCCGCAGCTCGTCCTCCATGCTCGCGCTCGCCTGCTCCGCTTCGGCATCGCCGGACTGCTCCGCCGCCGACTCCTCCGCCGCCTTGCTCTGCGCAGCGAGCGCCTCCTGGAGCTTCGCATTGGCCTCATCAGCCGCCCTCTTGGCACGCTCCAGTTCATCCAGGACTTTCCCCCTCTCCTTCTCCTTCTCCACCAACTCCTCCTTGGCCTTCACGAGCTCCTGC]
consensusID : consensus_14862#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 655 fasta sequence
[TTTTTTGCTTGGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAATCTGTACCAATCAAATTGAAAATTTCTGGTCCTTTTACAGCAACATTATCAAGGGATATTATACCATCCAATAACCAATAAATACAATCAACTAGAATATGAATGGACGCATCAAACATGCACAAGGGAATAAACCAAACGGGTGTGGTAAATACCAATCGACCATTGTGGTNATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGCAGGCCAATACCCAGAAGCTAGATGACCCAGTCCAACAGCAACAGCAGCATGCCCATCATTAGCCACAACACACCAAAGCAAATGTCATCCAGAATTTCATTGCTCAAGGTATGGGTTTTCTATCTTCCAGCAGCACCCACCAAATTTCTTCCAGCCACAGGGCTTCTTCTATTGTAGGCTGCTTGCTTGGGCGGTGATGCGTTGCCATTGCTCGCCGTCGTGGACTGCAAACCATNTGCCATCAACAATGGAATCTCCCGTGTGGACTCTAAATCAATTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACTTGCTGGTTCTCCCACATCTTGGAACTACCATTAACGGTTCATCATCCTCGGTGTCCCCTT]
[-] EMBL BM419948 [TTTTTTGCTTGGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAATCTGTACCAATCAAATTGAAAATTTCTGGTCCTTTTACAGCAACATTATCAAGGGATATTATACCATCCAATAACCAATAAATACAATCAACTAGAATATGAATGGACGCATCAAACATGCACAAGGGAATAAACCAAACGGGTGTGGTAAATACCAATCGACCATTGTGGTNATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGCAGGCCAATACCCAGAAGCTAGATGACCCAGTCCAACAGCAACAGCAGCATGCCCATCATTAGCCACAACACACCAAAGCAAATGTCATCCAGAATTTCATTGCTCAAGGTATGGGTTTTCTATCTTCCAGCAGCACCCACCAAATTTCTTCCAGCCACAGGGCTTCTTCTATTGTAGGCTGCTTGCTTGGGCGGTGATGCGTTGCCATTGCTCGCCGTCGTGGACTGCAAACCATNTGCCATCAACAATGGAATCTCCCGTGTGGACTCTAAATCAATTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACTTGCTGGTTCTCCCACATCTTGGAACTACCATTAACGGTTCATCATCCTCGGTGTCCCCTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14862#0 ---TTTTTTTTGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAATCTGTAC 57
consensus_14862#1 TTTTTTGCTTGGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAATCTGTAC 60
*** ** *************************************************
consensus_14862#0 CAATCAAATTGAAAATTTCTGCTCCTTTTACAGCAACATTATCAAGGCATATTATACA-- 115
consensus_14862#1 CAATCAAATTGAAAATTTCTGGTCCTTTTACAGCAACATTATCAAGGGATATTATACCAT 120
********************* ************************* *********
consensus_14862#0 TCAATAAC-AATAAATACAAT-AACTAGAATATGAATG-ACG-ATCAAACATGCACAAGG 171
consensus_14862#1 CCAATAACCAATAAATACAATCAACTAGAATATGAATGGACGCATCAAACATGCACAAGG 180
******* ************ **************** *** *****************
consensus_14862#0 -AATAAAC-AAACGGTTGT---AAATAC-AATCGACCATT-TG--TATTCTCTTAAAACA 222
consensus_14862#1 GAATAAACCAAACGGGTGTGGTAAATACCAATCGACCATTGTGGTNATTCTCTTAAAACA 240
******* ****** *** ****** *********** ** **************
consensus_14862#0 CCCAACATTTTTTTTTACCATGATGAGG--CAATACCCAGAAGCTAGATGACC-AGTCAA 279
consensus_14862#1 CCCAACATTTTTTTTTACCATGATGCAGGCCAATACCCAGAAGCTAGATGACCCAGTCCA 300
************************* * *********************** **** *
consensus_14862#0 AGA--AAGAG----ATGCC----ATATAGCACAAAACA----AAGAAATGTCATC-AGAA 324
consensus_14862#1 ACAGCAACAGCAGCATGCCCATCATTAGCCACAACACACCAAAGCAAATGTCATCCAGAA 360
* * ** ** ***** ** ***** *** * ********** ****
consensus_14862#0 TTTA--TGCT-AAGGT-TGGGTTTTCT--TCTTCAGCAGA--CCACCAAATTTCTTC-AG 375
consensus_14862#1 TTTCATTGCTCAAGGTATGGGTTTTCTATCTTCCAGCAGCACCCACCAAATTTCTTCCAG 420
*** **** ***** ********** * ****** *************** **
consensus_14862#0 CAA--GGGCTTCTTCTTTTGC-GGCTGCT-GCTTGGGCGGTGATGCGTTGCCATTGCTCG 431
consensus_14862#1 CCACAGGGCTTCTTCTATTGTAGGCTGCTTGCTTGGGCGGTGATGCGTTGCCATTGCTCG 480
* * *********** *** ******* ******************************
consensus_14862#0 CCGTCGTGGAGTGCAAACCATT-GCCATCAACAATGGAATCTCCCGTGTTGGACTCTAAA 490
consensus_14862#1 CCGTCGTGGACTGCAAACCATNTGCCATCAACAATGGAATCTCCCGTGT-GGACTCTAAA 539
********** ********** ************************** **********
consensus_14862#0 TCAACTTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACCTTG 550
consensus_14862#1 TCAA-TTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACTTGC 598
**** *************************************************** *
consensus_14862#0 CTGTTCTCCCACATCTTTGCAACTACCATTACCGGTTCATCATCCTCGCTGCCCCCCTTG 610
consensus_14862#1 TGGTTCTCCCACATCTT-GGAACTACCATTAACGGTTCATCATCCTCGGTGTCCCCTT-- 655
*************** * *********** **************** ** **** *
consensus_14862#0 ACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTTGCATTTGCAAGCACG 670
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 GAGAGCTCCTTTATCTTCTCAGAAGCAACAAGTTCCTTTGCTTGCAAATCATCGTTCTCT 730
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 TGTTTTATGTTCTGCAACTCATTTTCTTTGTCTAGTAGCTTTTCCTTCCACTGGAAGGTC 790
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 TCGGCCTTGGCTTCCTCGCATGTTTTGTTAGCTTCCATTAGCTGAGCTTCAAGATGCTTC 850
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 AACTTCTCCTGTAACTCAGCATTTTCACTTTCTTTGCCTTTTACAGCCTCCAAGGTCTTG 910
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 TCCATCTGAGCTCTGGCGTTGATGATTTCTTCTTCTGATTTTTTAATTGAGTTAACAAAA 970
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 CTTAGCTCTTTGGACTGCCATTCCTCAGACGCACTCTTGGTTTCTGCTTCCATTCTCTCA 1030
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 ACTGACTTCTTGAGACAAACTTTTTCATAGTTTGCTTCGTCAAGCATTACCTCATAGCTC 1090
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 TCCTTTGTATTCTGCAGACTTACATTGAGCTCCTCTACCTGTGCACGAGCACGATCAATC 1150
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 TCCTCTTGTTTATCTAGGTACTTCTCCTGCGCCACTCTCAGTTGAGCTGACATTTCGTGC 1210
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 AAAGCAGAGGCTTGACCCTCCATGGCCTTCTTAATCTTCTCAACTTCAGCTTTGCTAGCT 1270
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 TCAAGTTCCTTGGCTAGCATGTTCTTCTGTTCAATCAGGGTTTCCATTTCTGAACTGGCA 1330
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 ATCTTGTCATTGTTAAGGTCTTCTTCCGCCGCTTCGAGCTTCAACCTAAGGTCTTCTATC 1390
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 TCCAACCTTAATTCATCAGCTTCCTTATCAGCAGTATGAAAATCTTCTTTCTGCTTGGCT 1450
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 ACTTCATCCTCCAAAGACCTGACCTTATCCTGAAGTGCTTCGATTTCAGATTCTTTTTCT 1510
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 TGGAGCAGAGTCATTTTTGCATCCAATTCTTTCATTGCTGATTCTAAGGACTCGCCCTTG 1570
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 AGAATGTTAGACTGATCAGCTTCCTCCAACCTGACCTCCAATTCCAGTGCTTTTGTCTTC 1630
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 CATTTGCCAAGTAACTCCTCTGACCTCGCGCGCGCCTTCTTAACATCAGCGATTTCAACT 1690
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 TCAAGCTGTTCAACCACACCTTCCAATTCAACTGCCCTCTGCTCAGCGACATTTGCTTTC 1750
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 TCAAGCTCAAGCTTCAATCCAGAGTTCTCTTCTTCAAGCTTCCTAATGTGCTCCACAGCA 1810
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 CCTTTTGACGAGCTCCCTACCTCGGAATCAAGCAGCCCTTTGAGATGCGCCACCTCCGCA 1870
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 TTGAGGAGCTTGATCTTCTCGGCATTCTCATCTGAAGCCCTCATGGCATCAGGTGCCTGG 1930
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 GTAAGCGCCGCGTTCTTGGCATCGATTGCATCCGCTAGCTCATACCTGGCCTGCTCAAGC 1990
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 TGCTCCACCGTCGAACGCAGTGCGGCCATGTCAGCCTCCTGCTGGCTCTGCATGCTCGCC 2050
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 AGCTTCGTCCGCAGCTCGTCCTCCATGCTCGCGCTCGCCTGCTCCGCTTCGGCATCGCCG 2110
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 GACTGCTCCGCCGCCGACTCCTCCGCCGCCTTGCTCTGCGCAGCGAGCGCCTCCTGGAGC 2170
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 TTCGCATTGGCCTCATCAGCCGCCCTCTTGGCACGCTCCAGTTCATCCAGGACTTTCCCC 2230
consensus_14862#1 ------------------------------------------------------------
consensus_14862#0 CTCTCCTTCTCCTTCTCCACCAACTCCTCCTTGGCCTTCACGAGCTCCTGC 2281
consensus_14862#1 ---------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||