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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14865#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 790 fasta sequence
[CGAATT-CCCTTGGACCTGACTGGACTGAAGGAGTAGAAAAACTCCGGCGAAACCCAAAACCCTACTCCCTCGTCC-TCC-TCGTCGACGGCGGCGG-CGATGCTCCCGCAG-AGCC-AGAGCAGCTCGCTGCAGC-GGCTCAACCACGTCGAGCAGATGATAGTCCGGGCGGTGAATCTGGCCGGGACGGTCATGGAGGAGCTGGGGAACGCCACTGGGCCCCGCACCGA-GGGCGTCGCTGGCCACTGCCGCGAGTTCATGCTCGCCATGAAGGAAATTCAAACGACATTGCGTGAGGAAATCAAAAGTGCTTGCGAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGAGATTTGTTG-CAAAAAGGTGGAATATGTACTTGAGAAGCT-GGATGCTATGCAAAAGAA-CATTG-A-GG-AATGTTCTACTACT-AGTT-AATTGATAACT-AGTTATCTACCTACCTAC-TGGTTTACAGTGGCACAAGTGTGACT-GAGCGGTTTACAAAGGAACATGAGTG-T--CGGTGTAGCCAGCTTGCAAATGCACAAGGCATCATTGAACTATGAAATGTAATTTACCTTCGGTTTACAGTGCTTTGGTTTAGGTGGTTGCACAGTGATAAACT-GCAAGTAACCACTTCAGTCTTGCAGAAGGTTTACAGGGCAGAATCTGAAATGAATGCTTGCTAGTACTCGTATGAAATGAAAGGAATGGTTGCACATGCTTGCTTGCTAAAAAAAAAAAAAAAAAAAAAAAACGTCATGCCGTTACGTAGCGTATCGTTAAG]
[+] EMBL CF281157 [CGAATT CCCTTGGACCTGACTGGACTGAAGGAGTAGAAAAACTCCGGCGAAACCCAAAACCCTACTCCCTCGTCC TCC TCGTCGACGGCGGCGG CGATGCTCCCGCAG AGCC AGAGCAGCTCGCTGCAGC GGCTCAACCACGTCGAGCAGATGATAGTCCGGGCGGTGAATCTGGCCGGGACGGTCATGGAGGAGCTGGGGAACGCCACTGGGCCCCGCACCGAGGGGCGTCGCTGGCCACTGCCGCGAGTTCATGCTCGCCATGAAGGAAATTCAAACGACATTGCGTGAGGAAATCAAAAGTGCTTGCGAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGAGATTTGTTG CAAAAAGGTGGAATATGTACTTGAGAAGCT GGATGCTATGCAAAAGAA CATTG AGGG AATGTTCTACTACT AGTT AATTGATAACT AGTTATCTACCTACCTAC TGGTTTACAGTGGCACAAGTGTGACTGGAGCGGTTTACAAAGGAACATGAGTG TTCCGGTGTAGCCAGCTTGCAAATGCACAAGGCATCATTGAACTAT ]
[+] EMBL CF281312 [CGAATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAAAACTCCGGCGAAACCCAAAACCCTACTCCCTCGTCC TCC TCGTCGACGGCGGCGG CGATGCTCCCGCAG AGCC AGAGCAGCTCGCTGCAGC GGCTCAACCACGTCGAGCAGATGATAGTCCGGGCGGTGAATCTGGCCGGGACGGTCATGGAGGAGCTGGGGAACGCCACTGGGCCCCGCACCGA GGGCGTCGCTGGCCACTGCCGCGAGTTCATGCTCGCCATGAAGGAAATTCAAACGACATTGCGTGAGGAAATCAAAAGTGCTTGCGAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGAGATTTGTTG CAAAAAGGTGGAATATGTACTTGAGAAGCT GGATGCTATGCAAAAGAA CATTG A GG AATGTTCAACTACT AGTT AATTGATAACT AGTTATCTACCTACCTAC TGGTTTACAGTGGCACAAGTGTGACT GAGCGGTTTACAAAGGAACATGAGTGTT CGGTGTAGCCAGCTTGCAAATGCACAAGGCATCATTGAACTATGAAATGTAATTTACCTTCGGTTTAC ]
[+] EMBL AK111066 [ GAAACCCAAAACCCTACTCCCTCGTCC TCC TCGTCGACGGCGGCGG CGATGCTCCCGCAG AGCC AGAGCAGCTCGCTGCAGC GGCTCAACCACGTCGAGCAGATGATAGTCCGGGCGGTGAATCTGGCCGGGGCGGTCATGGAGGAGCTGGGGAACGCCACTGGGCCCCGCACCGA GGGCGTCGCTGGCCACTGCCGCGAGTTCATGCTCGCCATGAAGGAAATTCAAACGACATTGCGTGAGGAAATCAAAAGTGCTTGCGAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGAGATTTGTTG CAAAAAGGTGGAATATGTACTTGAGAAGCT GGATGCTATGCAAAAGAA CATTG A GG ATGTTCTACTACT AGTT AATTGATAACT AGTTATCTACCTACCTAC TGGTTTACAGTGGCACAAGTGTGACT GAGCGGTTTACAAAGGAACATGAGTG T CGGTGTAGCCAGCTTGCAAATGCACAAGGCATCATTGAACTATGGAATGTAATTTACCTTCGGTTTACAGTGCTTTGGTTTAGGTGGTTGCACAGTGATAAACT GCAAGTAACCACTTCAGTCTTGCAGAAGGTTTACAGGGCAGAATCTGAAATGAATGCTTGCTAGTACTCGTATGAAATGAAAGGAATGGT ]
[+] EMBL C93489 [ AAACCCTACTCCCTCGTCC TCC TCGTCGACGGCGGCGG CGATGCTCCCGCAG AGCC AGAGCAGCTCGCTGCAGC GGCTCAACCACGTCGAGCAGATGATAGTCCGGGCGGTGAATCTGGCCGGNACGGTCATGGAGGAGCTGGGGAACGCCACTGGGCCCCGCACCGA GGGCNTCGCTGGCCACTGCCGCNAGTTCATGCTCGCNATGAAGGAAATTCAAACGACATTGCGTGAGGAAATCAAAAGTGCTTTCGAATATCGCCATTTTAAGAAagtnt ]
[+] EMBL AU063035 [ AAACCCTACTCCCTCGTCC TCC TCGTCGACGGCGGCGG CGATGCTCCCGCAG AGCC AGAGCAGCTCGCTGCAGC GGCTCAACCACGTCGAGCAGATGATAGTCCGGGCGGTGAATCTGGCCGGGACGGTCATGGAGGAGCTGGGGAACGCCACTGGGCCCCGCACCGA GGGCGTCGCTGGCCACTGCCGCGAGTTCATGCTCGCCATGAAGGAAATTCAAACGACATTGCGTGAGGAAATCAAAAGTGCTTGCGAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGAGATTTGTTG CAAAAAGGTGGAATATGTACTTGAGAAGCT GGATGCTATGCAAAAGAA CATTGAA GG AATGTTCTACTACTAAGTT AATTGATAACT AGTTATCTACCTACCTAC TTGGTTACAGTNGCACAAGTGT ]
[+] EMBL C74100 [ AACCCTACTCCCTCGTCC TCC TCGTCGACGGCGGCGG CGATGCTCCCGCAG AGCC AGAGCAGCTCGCTGCAGC GGCTCAACCACGTCGAGCAGATGATAGTCCGGGCGGTGAATCTGGCCGGGACGGTCATGGAGGAGCTGGGGAACGCCACTNGGCCCCGCACCGA GGGCGTCGCTGGCCACTGCCGCGAGTNCATGCTCGCCATGAAGGAAATTCAAACGACATTGCGTGAGGAAATCAAAAGTGCTTGCGAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGAGANTTGTTG CAAAAAGGTGGAATATGTACTTGAGAAGCT GGATGCTATGCAAAAGAA CATTG AGGG AATGTTCTACTACT A ]
[+] EMBL OSC23231 [ CCCTACTCCCTCGTCC TCC TCGTCGACGGCGGCGG CGATGCTCCCGCAG AGCC AGAGCAGCTCGCTGCAGC GGCTCAACCACGTCGAGCAGATGATAGTCCGGGCGGTGAATCTGGCCGGGACGGTCATGGAGGAGCTGGGGAACGCCACTGGGCCCCGCACCGA GGGCGTCGCTGGCCACTGCCGCGAGTTCATGCTCGCCATGAAGGAAATTCAAACGACATTNCGTNAGGAAATCAAAAGTGCTTGCGAATATCGCCCATTTGAGAAGTGTGACTACAGTTCAAGGATTGCTAATGAGATTTGTTG CAAAAAGGTGGAATATGTACTTGAGAAGCT GGATGCTATGCAAAAGAA CATTG A GG AATGTTCTACTACT AGTT AATTGATAACT AGTTATCTACCTACCTAC TGGTTTACAG ]
[+] EMBL AU165977 [ nGTCCTTCCTTNGTCGACGGCGCCGGCCAATGCTCCCGCAGAAGCCAAGAGCAGCTCGCTGCAGCGGGCTCANCCACGTCGAGCAGATGATAGTCCGGCCGGTGAATCTGGCC GGACGGTCATGAAGGAGCTGGGGAACGCCACTGGGCCCCGCACCGA GGGCGTCGCTGGCCACTGCCGCGAGTTCATGCTCGCCATGAAGGAAATTCAAACGACATTGCGTGAGGAAATCAAAAGTGCTTGCGAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGAGATTTGTTG CAAAAAGGTGGAATATGTACTTGAGAAGCT GGATGCTATGCAAAAGAA CATTG A GG AATGTTCTACTACT AGTT AATTGATAACT AGTTATCTACCTACCTAC TGGTTTACAGTGGCACAAGTGTGACT GAGCGGTTTACAAAGGAACATGAGTG T CGGTGTAGCCAGCTTGCAAATGCACAAGGCATCATTGAACTATGAAATGTAATTTACCTTCGGTTTACAGTGCTTTGGTTTAGGTGGTTGCACAGTGATAAACT GCAAGTAACCACTTCAGTCTTGCAGAAGGTTTACAGGGCAGAATCTGAAATGAATGCTTGCTAGTACTCGTATGAAATGAAAGGAATGGTTGCACATGCTTGCTTGCTAAAAAAAAA ]
[+] EMBL CA756036 [ C TCGTCGAAAACGGCGG CGATGCTCCCGCAG AGCC AGAGCAGCTCGCTGCAGC GGCTCAACCACGTCGAGCAGATGATAGTCCGGGCGGTGAATCTGGCCGGGACGGTCATGGAGGAGCTGGGGAACGCCACTGGGCCCCGCACCGA GGGCGTCGCTGGCCACTGCCGCGAGTTCATGCTCGCCATGAAGGATATTCAAACGACATTGCGTGAGGAAATCAAAAGTGCTTGCGAATATCGCCCATTTGAGAAGTGTGACTACNGTGCAAGGATTGCTAATGAGATTTGTTG CAAAAAGGTGGAATATGTACTTGAGAAGCT GGATGCTATGCANAAGAA CATTG A GG AATGTTCTACTACT AGTT AATTGATAACT AGTTATCTACCTACCTAC TGGTTTACAGTGGCACAAGTGTGACT GAGCGGTTTACAAAGGAACATGAGTG T CGGTGTAGCCCGCTTGCANATGCACAAGGCATCATTGAACTATGANATGTAATTTACCTTCGGTTTACAGTGCTTTGGTTTAGGTGGGTGCACAGTGATNAACTGGGCAGT ACCACTTCAGTCTTGCAGAAGGTTTACAGGGCAGAATCTGAAATGAATGCTTGCTAGTACTCGTATGA ]
[+] EMBL C27361 [ CGCAG AGCC AGAGCAGCTCGCTGCAGC GGCTCAACCACGTCGAGCAGATGATAGTCCGGGCGGTGAATCTGGCCGGGACGGTCATGGAGGAGCTGGGGAACGCCACTGGGCCCCGCACCGA GGGCGTCGCTGGCCACTGCCGCGAGTTCATGCTCGCCATGAAGGAAATTCAAACGACATTGCGTGAGGAAATCAAAAGTGCTTGCNAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGAGATTTGTTG CAAAAAGGTGGAATATGTACTTGAGAAGCTGGGATGCTATGCAAAAGAACCATTG A GG AATGTTCTACTACT AGTTNAATTGAT ACTNAGTTATCTACCTACCTACTTGGTTTACAGT ]
[-] EMBL CF281158 [ TCTGGCCGGGACGGTCATGGAGGAGCTGGGGAACGCCACTGGGCCCCGCACCGA GGGCGTCGCTGGCCACTGCCGCGAGTTCATGCTCGCCATGAAGGAAATTCAAACGACATTGCGTGAGGAAATCAAAAGTGCTTGCGAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGAGATTTGTTG CAAAAAGGTGGAATATGTACTTGAGAAGCT GGATGCTATGCAAAAGAA CATTG A GG AATGTTCTACTACT AGTT AATTGATAACT AGTTATCTACCTACCTAC TGGTTTACAGTGGCACAAGTGTGACT GAGCGGTTTACAAAGGAACATGAGTG T CGGTGTAGCCAGCTTGCAAATGCACAAGGCATCATTGAACTATGAAATGTAATTTACCTTCGGTTTACAGTGCTTTGGTTTAGGTGGTTGCACAGTGATAAACT GCAAGTAACCACTTCAGTCTTGCAGAAGGTTTACAGGGCAGAATCTGAAATGAATGCTTGCTAGTACTCGTATGAAATGAAAGGAATGGTTGCACATGCTTGCTTGCTAAAAAAAAAAAAAAAAAAAAAAAACGTCATGCCGTTACGTAGCGTATCGTTAAG]
[+] EMBL AU222506 [ CACTGCCGCGAGTTCATGCTCGCCATGAAGGAAATTCAAACGACATTGCGTGAGGAAATCAAAAGTGCTTGCGAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGAGATTTGTTG CAAAAAGGTGGAATATGTACTTGAGAAGCT GGATGCTATGCAAAAGAA CATTG A GG AATGTTCTACTACT AGTT AATTGATAACT AGTTATCTACCTACCTAC TGGTTTACAGTGGCACAAGTGTGACT GAGCGGTTTACAAAGGAACATGAGTG T CGGTGTAGCCAGCTTGCAAATGCACAAGGCATCATTGAACTATGAAATGTAATTTACCTTCGGTTTACAGTGCTTTGGTTTAGGTGGTTGCACAGTGATAAACT GCAAGTAACCACTTCAGTCTTGCAGAAGGTTTACAGGGCAGAATCTGAAATGAATGCTTGCTAGTACTCGTATGAAATGAAAGGAATGGTTGCACATGCTTGCTTGCTAAAAAAAA ]
[+] EMBL AU092625 [ CTACAGTGCAAGGATTGCTAATGAGATTTGTTGCCAAAAAGGTGGAATATGTACTTGAGAAGCT GGATGCTATGCAAAAGAC CATTG A GGNAATGTTCTACTACT AGTT AATTGATAACT AGTTATCTACCTACCTAC TGGTTTACAGTGGCACAAGTGTGACT GAGCGGTTTACAAAGGAACATGAGTG T CGGTGTAGCCAGCTTGCAAATGCACAAGGCATCATTGAACTATGAAATGTAATTTA CTTCGGTTTACAGTGCTTTGGTTTAGGTGGTTGCACAGTGATAAACT GCAAGTAACCACTTCAGTCTTGCAGAAGGTTTACAGGGCAGAATCTGAAATGAATGCTTGCTAGTACTCGTATGAAATGAAAGGAATGGTTGCACATGCTTGCTTGCTAAAAAAAA ]
consensusID : consensus_14865#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 633 fasta sequence
[GATCTGGCCGGACGTCATGAGACTGGGAACGCCA-CTGGCCCCGCACCGAGGGCGTCGCTGGCCACTGCCGCGAGTTCATGCTCCCCATGAAGGAAATTCAAACGACATTGCGTGAGGAAATCAAAAGTGCTTGCGAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGAGATTTGTTGC-AAAAGGTGGAATATGTACTTGAGAAGCTGGATGCTATGC-AAAGAAC-TTGAGGAATGTTCTACTACTAGTTAATTGATAACTAGTTATCTACCTACCTACTGGTTTACAGTGGCACAAGTGTGACTGAGCGGTTTAC-AAGGAACATGAGTGTCGGTGTAGCCAGCTTGCAAATGCACAAGGCATCATTGAACTATGAAATGTAATTTACCTTCGGTTTACAGTGCTTTGGTTTAGGTGGTTGCACAGTGATAAACTGCAAGTAACCACTTCAGTCTTGCAGAAGGTTTACAGGGCGTTGGTTTAGGTGGTTGCACAGTGATAAACTGCATGTAACCACTTCAGCCTTACAGAATCTGAAATGAATGCTTGCTAGTACTCGTATGAAATGAAAGGAATGGTTGCACA-TGCTTGCTTGCTAAAAAAAAAAAAAAAAAAACCC]
[+] EMBL BI805322 [GATCTGGCCGGACGTCATGAGACTGGGAACGCCA CTGGCCCCGCACCGAGGGCGTCGCTGGCCACTGCCGCGAGTTCATGCTCCCCATGAAGGAAATTCAAACGACATTGCGTGAGGAAATCAAAAGTGCTTGCGAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGAGATTTGTTGC AAAAGGTGGAATATGTACTTGAGAAGCTGGATGCTATGC AAAGAAC TTGAGGAATGTTCTACTACTAGTTAATTGATAACTAGTTATCTACCTACCTACTGGTTTACAGTGGCACAAGTGTGACTGAGCGGTTTAC AAGGAACATGAGTGTCGGTGTAGCCAGCTTGCAAATGCACAAGGCATCATTGAACTATGAAATGTAATTTACCTTCGGTTTACAGTGCTTTGGTTTAGGTGGTTGCACAGTGATAAACTGCAAGTAACCACTTCAGTCTTGCAGAAGGTTTACAGGGCGTTGGTTTAGGTGGTTGCACAGTGATAAACTGCATGTAACCACTTCAGCCTTACAGAATCTGAAATGAATGCTTGCTAGTACTCGTATGAAATGAAAGGAATGGTTGCACA TGCTTGCTTGCTAAAAAAA ]
[+] EMBL CA753598 [ gGGGAACGCCACCGGGCCCCGCACCGAGGGCGTCGCTGGCCACTGCCGCGAGTTCATGCTCGCCATGAAGGAAATTCAAACGACATTGCGTGAGGAAATCAAAAGTGCTTGCGAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGAGATTTGTTGCAAAAAGGTGGAATATGTACTTGAGAAGCTGGATGCTATGCAAAAGAACATTGAGGAATGTTCTACTACTAGTTAATTGATAACTAGTTATCTACCTACCTACTGGTTTACAGTGGCACAAGTGTGACTGAGCGGTTTACAAAGGAACATGAGTGTCGGTGTAGCCAGCTTGCAAATGCACAAGGCATCATTGAACTATGAAATGTAATTTACCTTCGGTTTACAGTGCTTTGGTTTAGGTGGTTGCACAGTGATAAACTGCAAGTAACCACTTCAGTCTTGCAGAAGGTTTACAGGGCGTTGGTTTAGGTGGTNGCACAGTGATAAACTGCATGTAACCACTTCAGCCTTACAGAATCTGAAATGAATGCTTGCTAGTACTCGTATGAAATGAAAGGAATGGTNGCACATTGCTTGC TGCTAAAAAAAAAAAAAAAAAAACCC]
consensusID : consensus_14865#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 471 fasta sequence
[ACATTGCGTGAGNAAATCAAAAGTGCTTTGCGAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGAGATTTNTTGCAAAAAGGTGGAATATGTACTTGAGAAGCTGGATGCTATGCAAAAGAACATTGAGGAATGTTCTACTACTAGTTAATTGATAACTAGTTATCTACCTACCTACTGGTTTACAGTGGCACAAGTNTGACTGAGCGGTTTACAAAGGAACATGAGTGTCGGTGTAGCCAGCTTGCAANTGCACAAGGCATCATTGAACTATGAAATGTAATTT-ACTTCGGTTTACAGTGCTTTGGTTTAGGTGGTTGCACAGTGATAAACTGCAAGTAACCACTTCAGTCTTGCAGAAGGTTTACAGGGCAGAATCTGAAATGAATGCTTGCTAGTACTCGTATGAAATGAAAGGAATGGTTGCACAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU029387 [ACATTGCGTGAGNAAATCAAAAGTGCTTTGCGAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGAGATTTNTTGCAAAAAGGTGGAATATGTACTTGAGAAGCTGGATGCTATGCAAAAGAACATTGAGGAATGTTCTACTACTAGTTAATTGATAACTAGTTATCTACCTACCTACTGGTTTACAGTGGCACAAGTNTGACTGAGCGGTTTACAAAGGAACATGAGTGTCGGTGTAGCCAGCTTGCAANTGCACAAGGCATCATTGAACTATGAAATGTAATTT ACTTCGGTTTACAGTGCTTTGGTTTAGGTGGTTGCACAGTGATAAACTGCAAGTAACCACTTCAGTCTTGCAGAAGGTTTACAGGGCAGAATCTGAAATGAATGCTTGCTAGTACTCGTATGAAATGAAAGGAATGGTTGCACAAAAAAAAAAAAAAAA ]
[+] EMBL AU181699 [ nTGAGCGGTTTACAAAGGAACATNAGNGTCGGTGTAGCCAGCTTGCAAATGCCCAAGGCATCATTGAACTATGAAATGTAATTTNCCTTCGGTTTNCAGTGCTTTGGTTTAGGTGGTTGCCCAGTGATAAACTGCAAGTAACCNCTTCAGTNTTGCANAAGGTTTACAGGGCAGAATNTGAAATGAATGCTTGCTAGTACTCGTATGAAATGAAAGGAATGGTTGCCCAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_14865#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 359 fasta sequence
[GGGAAACTTGACCCNTAAAACCCCGGACCCCTTTCCNAAAGACCNTTNGGGGATTGGNCCTCCCACCAGGTNAATGAAAACCAAGTTANCCTACCTACCTACTGGTTTACAGTGGCACCAGTGTGACCTGACCGGTTTACAAAGGAACATGAGTGTCGGTGTAGCCAGCTTGCAAATGCACAAGGCATCATTGAACTATGAAATGTAATTTACTTCGGTTTACAGTGCTTTGGTTTAGGTGGTTGCACAGTGATAAACTGCAAGTAACCACTTCAGTCTTGCAGAAGGTTTACAGGGCAGAATCTGAAATGAATGCTTGCTAGTACCCGTATGAAATGAAAGGAATGGTTGCACATGCT]
[+] EMBL D42874 [GGGAAACTTGACCCNTAAAACCCCGGACCCCTTTCCNAAAGACCNTTNGGGGATTGGNCCTCCCACCAGGTNAATGAAAACCAAGTTANCCTACCTACCTACTGGTTTACAGTGGCACCAGTGTGACCTGACCGGTTTACAAAGGAACATGAGTGTCGGTGTAGCCAGCTTGCAAATGCACAAGGCATCATTGAACTATGAAATGTAATTTACTTCGGTTTACAGTGCTTTGGTTTAGGTGGTTGCACAGTGATAAACTGCAAGTAACCACTTCAGTCTTGCAGAAGGTTTACAGGGCAGAATCTGAAATGAATGCTTGCTAGTACCCGTATGAAATGAAAGGAATGGTTGCACATGCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14865#0 CGAATTCCCTTGGACCTGACTGGACTGAAGGAGTAGAAAAACTCCGGCGAAACCCAAAAC 60
consensus_14865#2 ------------------------------------------------------------
consensus_14865#1 ------------------------------------------------------------
consensus_14865#3 ------------------------------------------------------------
consensus_14865#0 CCTACTCCCTCGTCCTCCTCGTCGACGGCGGCGGCGATGCTCCCGCAGAGCCAGAGCAGC 120
consensus_14865#2 ------------------------------------------------------------
consensus_14865#1 ------------------------------------------------------------
consensus_14865#3 ------------------------------------------------------------
consensus_14865#0 TCGCTGCAGCGGCTCAACCACGTCGAGCAGATGATAGTCCGGGCGGTGAATCTGGCCGGG 180
consensus_14865#2 ------------------------------------------------------------
consensus_14865#1 -----------------------------------------------------GATCTGG 7
consensus_14865#3 ------------------------------------------------------------
consensus_14865#0 ACGGTCATGGAGGAGCTGGGGAACGCCACTGGGCCCCGCACCGAGGGCGTCGCTGGCCAC 240
consensus_14865#2 ------------------------------------------------------------
consensus_14865#1 CCGGACGTCATGAGACTGGG-AACGCCACTGG-CCCCGCACCGAGGGCGTCGCTGGCCAC 65
consensus_14865#3 ------------------------------------------------------------
consensus_14865#0 TGCCGCGAGTTCATGCTCGCCATGAAGGAAATTCAAACGACATTGCGTGAGGAAATCAAA 300
consensus_14865#2 ---------------------------------------ACATTGCGTGAGNAAATCAAA 21
consensus_14865#1 TGCCGCGAGTTCATGCTCCCCATGAAGGAAATTCAAACGACATTGCGTGAGGAAATCAAA 125
consensus_14865#3 ------------------------------------------------------------
consensus_14865#0 AGTGCTT-GCGAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGA 359
consensus_14865#2 AGTGCTTTGCGAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGA 81
consensus_14865#1 AGTGCTT-GCGAATATCGCCCATTTGAGAAGTGTGACTACAGTGCAAGGATTGCTAATGA 184
consensus_14865#3 ------------------------------------------------------------
consensus_14865#0 GATTTGTTGCAAAAAGGTGGAATATGTACTTGAGAAGCTGGATGC-TATGCAAAAGAACA 418
consensus_14865#2 GATTTNTTGCAAAAAGGTGGAATATGTACTTGAGAAGCTGGATGC-TATGCAAAAGAACA 140
consensus_14865#1 GATTTGTTGCAAAA-GGTGGAATATGTACTTGAGAAGCTGGATGC-TATGCAAA-GAAC- 240
consensus_14865#3 ---------------GGGAAACTTGACCCNTAAAACCCCGGACCCCTTTCCNAAAGACCN 45
** * * * * * * * *** * * * * ** ** *
consensus_14865#0 TTGAGGAAT--GTTCTACTACTAGTTAATTGATAACTA-GTTATC-TACCTACCTACTGG 474
consensus_14865#2 TTGAGGAAT--GTTCTACTACTAGTTAATTGATAACTA-GTTATC-TACCTACCTACTGG 196
consensus_14865#1 TTGAGGAAT--GTTCTACTACTAGTTAATTGATAACTA-GTTATC-TACCTACCTACTGG 296
consensus_14865#3 TTNGGGGATTGGNCCTCCCACCAGGTNAATGAAAACCAAGTTANCCTACCTACCTACTGG 105
** ** ** * ** * ** ** * * *** *** * **** * **************
consensus_14865#0 TTTACAGTGGCACAAGTGTGAC-TGAGCGGTTTACAAAGGAACATGAGTGTCGGTGTAGC 533
consensus_14865#2 TTTACAGTGGCACAAGTNTGAC-TGAGCGGTTTACAAAGGAACATGAGTGTCGGTGTAGC 255
consensus_14865#1 TTTACAGTGGCACAAGTGTGAC-TGAGCGGTTTACAA-GGAACATGAGTGTCGGTGTAGC 354
consensus_14865#3 TTTACAGTGGCACCAGTGTGACCTGACCGGTTTACAAAGGAACATGAGTGTCGGTGTAGC 165
************* *** **** *** ********** **********************
consensus_14865#0 CAGCTTGCAAATGCACAAGGCATCATTGAACTATGAAATGTAATTTACCTTCGGTTTACA 593
consensus_14865#2 CAGCTTGCAANTGCACAAGGCATCATTGAACTATGAAATGTAATTTAC-TTCGGTTTACA 314
consensus_14865#1 CAGCTTGCAAATGCACAAGGCATCATTGAACTATGAAATGTAATTTACCTTCGGTTTACA 414
consensus_14865#3 CAGCTTGCAAATGCACAAGGCATCATTGAACTATGAAATGTAATTTAC-TTCGGTTTACA 224
********** ************************************* ***********
consensus_14865#0 GTGCTTTGGTTTAGGTGGTTGCACAGTGATAAACTGCAAGTAACCACTTCAGTCTTGCAG 653
consensus_14865#2 GTGCTTTGGTTTAGGTGGTTGCACAGTGATAAACTGCAAGTAACCACTTCAGTCTTGCAG 374
consensus_14865#1 GTGCTTTGGTTTAGGTGGTTGCACAGTGATAAACTGCAAGTAACCACTTCAGTCTTGCAG 474
consensus_14865#3 GTGCTTTGGTTTAGGTGGTTGCACAGTGATAAACTGCAAGTAACCACTTCAGTCTTGCAG 284
************************************************************
consensus_14865#0 AAGGTTTACAGGGC---------------------------------------------- 667
consensus_14865#2 AAGGTTTACAGGGC---------------------------------------------- 388
consensus_14865#1 AAGGTTTACAGGGCGTTGGTTTAGGTGGTTGCACAGTGATAAACTGCATGTAACCACTTC 534
consensus_14865#3 AAGGTTTACAGGGC---------------------------------------------- 298
**************
consensus_14865#0 --------AGAATCTGAAATGAATGCTTGCTAGTACTCGTATGAAATGAAAGGAATGGTT 719
consensus_14865#2 --------AGAATCTGAAATGAATGCTTGCTAGTACTCGTATGAAATGAAAGGAATGGTT 440
consensus_14865#1 AGCCTTACAGAATCTGAAATGAATGCTTGCTAGTACTCGTATGAAATGAAAGGAATGGTT 594
consensus_14865#3 --------AGAATCTGAAATGAATGCTTGCTAGTACCCGTATGAAATGAAAGGAATGGTT 350
**************************** ***********************
consensus_14865#0 GCACATGCTTGCTTGCTAAAAAAAAAAAAAAAAAAAAAAAACGTCATGCCGTTACGTAGC 779
consensus_14865#2 GCACAAA----------AAAAAAAAAAAAAAAAAAAAAAAA------------------- 471
consensus_14865#1 GCACATGCTTGCTTGCTAAAAAAAAAAAAAAAAAAACCC--------------------- 633
consensus_14865#3 GCACATGCT--------------------------------------------------- 359
*****
consensus_14865#0 GTATCGTTAAG 790
consensus_14865#2 -----------
consensus_14865#1 -----------
consensus_14865#3 -----------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||