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Oryza sativa
cluster # 14885 cluster # 14885       Sequences # 18       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14885#0 length = 2139 sequences # 17  
 consensus_14885#1 length = 215 sequences # 1  
consensusID : consensus_14885#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 2139
fasta sequence 
                              [ATCTAACCCCAGACTTTTCCTCCCCTCCTCCCTCTCCTCCGGCCCCGCCGCCAGAGCCCTTCCAGAAGCTTCCGGAG-CCCGCGCCGCCGATCTGATCGCCGCCGCGTGCCATGGCCGACGAGGCGAAGGCGAAGGGTAATGCGGCCTTCTCGGCCGGCCGCTACGAGGAGGCGGCGCGGCACTTCACTGACGCCATCGCGCTCGCCCCGGGGAACCACGTCCTCTACTCCAACCGCTCCGCCGCGCTCGCCTCGGTCCACCGCTACTCCGAGGCGCTCGCCGACGCCGAGAAGACCGTCGAGCTGAAGCCCGACTGGGCTAAGGGGTACTCCCGCCTCGGAGCCGCCCACCTCGGCCTCGGCGACGCCGCGAGCGCCGTCGCCGCCTACGAGAAGGGCCTCGCCCTCGACCCCACCAACGAGGGCCTTAAGGCCGGCCTCGCCGATGCCAAGAAGGCGGCCGCCGCCCCGCCGCGCCGCCCGCCGCCCAGCGGCGTTGACGGCATAGGCCAGATGTTCCAGGGGCCCGAGCTCTGGACCAAGATCGCCTCCGACCCGACCACGCGCGCATACCTCGAGCAGCCCGACTTCATGCAGATGCTGCGGGATGTGCAGAGGAACCCCAGCAGCCTCAACATGTACCTCTCCGATCCCCGGATGATGCAGGTGCTCGGCCTCATGCTTAACATCAAGATCCAGAGACCAGAGGCCTCTGAATCGTCGCAGCCCAGCTCGTCGCCGCCGTCGCAGCCGCAGGAGCAGCCCGAGGCGAAGGCGAGGGAGGTGGAGCCAGAGCCTGAGCCGGAGCCGATGGAGGTGACCGATGAGGAGAAGGAGCGGAAGGAGAGGAAATCGTCTGCTCAGAAGGAGAAGGAAGCGGGGAACGCAGCTTACAAGAAAAAGGACTTCGAGACCGCGATCCAGCATTACACAAAAGCCATGGAACTTGATGATGAGGACATTTCCTATCTTACCAACCGTGCAGCGGTCTACATTGAGATGGGAAAGTACGATGAATGCGTTAAGGACTGTGATAAGGCTGTGGAGAGGGGAAGGGAACTTCGTGCTGATTTCAAGATGATCTCAAGGGCACTGACAAGAAAAGGAACAGCCCTAGCCAAACTTGCTAAGACCTCTAAGGACTATGACATTGCCATTGAGACTTTCCAGAAGGCTCTAACTGAGCATCGGAATCCAGACACTCTAAAAAAGCTAAATGAGGCTGAGAGGGCAAAGAAAGAGTTGGAGCAACAAGAGTACTATGATCCAAAGTTAGCAGATGAA-GAGAGAGAGAAAGGTAATCAGCTTTTCAAGGAGCAAAAATAT-CCAGACGCGGTAAAGCATTACACTGAGGCTATCAGGAGAAATCCTAAGGACCCGAAGGTGTACAGCAATAGGGCTGCATGCTACACCAAGTTGGGAGCCATGCCTGAAGGTCTTAAAGATGCAGAGAAGTGCATTGAACTAGATCCCACCTTCTCCAAAGGGTATACAA-GGAAA-GGTGCAATTCAGTTTTTCATGAAAGAATATGACAAGGCAATGGAAACTTACCAGGCCGGTTTGAAGCATGATCCGAATAACCCGGAACTGCTGGACGGTGTGA-AAAGGTGTATCGAACAGATCAACAAGGCCAACAGGGGTGATTTGACTCAGGAAGAGATTCAGGAACGACAGAACAAGGCTATGCAGGATCCAGAGATCCAGAATATTCTTACAGATCCCATCATGCGACAGGTACTGGTCGATTTGCAGGAGAACCCTAGGGCTTCTCAGGAGCATCTTAAGAACCCTGGAGTGATGCAGAAGATTCAGAAGCTTGTAAGCGCTGGAATAGTTCAAATGAGATAGTCGACCAAAGCAAGAAGCGCTGTTCGTGTCTA-TGTTCATTGCTCCTTACTTTTTTTCCATGCTCAGTCTTTGTGGACTTAAGATTTACACA-GTTTGGGGCTAATCTTCATTCTCAATTGGATTATGTGAGTG-CAGCGTGTCACTGGATTATTAGTGGTTATGGCATCCGTGCTACAGCTGCACGTGC-AAACGTATGTCTCTATTTGTTAGTCCTAAACATTTTCCCTACCGAATGAAAATAGAGCCATAAGAGGTGCAGAAATAAAAAAGGGATTTTATTTTAAAAAAAAAA]

[+] EMBL AK102431             [ATCTAACCCCAGACTTTTCCTCCCCTCCTCCCTCTCCTCCGGCCCCGCCGCCAGAGCCCTTCCAGAAGCTTCCGGAG CCCGCGCCGCCGATCTGATCGCCGCCGCGTGCCATGGCCGACGAGGCGAAGGCGAAGGGTAATGCGGCCTTCTCGGCCGGCCGCTACGAGGAGGCGGCGCGGCACTTCACTGACGCCATCGCGCTCGCCCCGGGGAACCACGTCCTCTACTCCAACCGCTCCGCCGCGCTCGCCTCGGTCCACCGCTACTCCGAGGCGCTCGCCGACGCCGAGAAGACCGTCGAGCTGAAGCCCGACTGGGCTAAGGGGTACTCCCGCCTCGGAGCCGCCCACCTCGGCCTCGGCGACGCCGCGAGCGCCGTCGCCGCCTACGAGAAGGGCCTCGCCCTCGACCCCACCAACGAGGGCCTTAAGGCCGGCCTCGCCGATGCCAAGAAGGCGGCCGCCGCCCCGCCGCGCCGCCCGCCGCCCAGCGGCGTTGACGGCATAGGCCAGATGTTCCAGGGGCCCGAGCTCTGGACCAAGATCGCCTCCGACCCGACCACGCGCGCATACCTCGAGCAGCCCGACTTCATGCAGATGCTGCGGGATGTGCAGAGGAACCCCAGCAGCCTCAACATGTACCTCTCCGATCCCCGGATGATGCAGGTGCTCGGCCTCATGCTTAACATCAAGATCCAGAGACCAGAGGCCTCTGAATCGTCGCAGCCCAGCTCGTCGCCGCCGTCGCAGCCGCAGGAGCAGCCCGAGGCGAAGGCGAGGGAGGTGGAGCCAGAGCCTGAGCCGGAGCCGATGGAGGTGACCGATGAGGAGAAGGAGCGGAAGGAGAGGAAATCGTCTGCTCAGAAGGAGAAGGAAGCGGGGAACGCAGCTTACAAGAAAAAGGACTTCGAGACCGCGATCCAGCATTACACAAAAGCCATGGAACTTGATGATGAGGACATTTCCTATCTTACCAACCGTGCAGCGGTCTACATTGAGATGGGAAAGTACGATGAATGCGTTAAGGACTGTGATAAGGCTGTGGAGAGGGGAAGGGAACTTCGTGCTGATTTCAAGATGATCTCAAGGGCACTGACAAGAAAAGGAACAGCCCTAGCCAAACTTGCTAAGACCTCTAAGGACTATGACATTGCCATTGAGACTTTCCAGAAGGCTCTAACTGAGCATCGGAATCCAGACACTCTAAAAAAGCTAAATGAGGCTGAGAGGGCAAAGAAAGAGTTGGAGCAACAAGAGTACTATGATCCAAAGTTAGCAGATGAA GAGAGAGAGAAAGGTAATCAGCTTTTCAAGGAGCAAAAATAT CCAGACGCGGTAAAGCATTACACTGAGGCTATCGGGAGAAATCCTAAGGACCCGAAGGTGTACAGCAATAGGGCTGCATGCTACACCAAGTTGGGAGCCATGCCTGAAGGTCTTAAAGATGCAGAGAAGTGCATTGAACTAGATCCCACCTTCTCCAAAGGGTATACAA GGAAA GGTGCAATTCAGTTTTTCATGAAAGAATATGACAAGGCAATGGAAACTTACCAGGCCGGTTTGAAGCATGGTCCGAATAACCCGGAACTGCTGGACGGTGTGA AAAGGTGTATCGAACAGATCAACAAGGCCAACAGGGGTGATTTGACTCAGGAAGAGATTCAGGAACGACAGAACAAGGCTATGCAGGATCCAGAGATCCAGAATATTCTTACAGATCCCATCATGCGACAGGTACTGGTCGATTTGCAGGAGAACCCTAGGGCTTCTCAGGAGCATCTTAAGAACCCTGGAGTGATGCAGAAGATTCAGAAGCTTGTAAGCGCTGGAATAGTTCAAATGAGATAGTCGACCAAAGCAAGAAGCGCTGTTCGTGTCTA TGTTCATTGCTCCTTACTTTTTTTCCATGCTCAGTCTTTGTGGACTTAAGATTTACACA GTTTGGGGCTAATCTTCATTCTCAATTGGATTATGTGAGTG CAGCGTGTCACTGGATTATTAGTGGTTATGGCATCCGTGCTACAGCTGCACGTGC AAACGTATGTCTCTATTTGTTAGTCCTAAACATTTTCCCTACCGAATGAAAATAGAGCCA                                             ]
[+] EMBL CB646110             [                      CCCTCCCCTCTAAGCTCCGGCCCCGCCGCCAGAGCCCTTCCAGAAGCTTCCGGAG CCCGCGCCGCCGATCTGATCGCCGCCGCGTGCCATGGCCGACGAGGCGAAGGCGAAGGGTAATGCGGCCTTCTCGGCCGGCCGCTACGAGGAGGCGGCGCGGCACTTCACTGACGCCATCGCGCTCGCCCCGGGGAACCACGTCCTCTACTCCAACCGCTCCGCCGCGCTCGCCTCGGTCCACCGCTACTCCGAGGCGCTCGCCGACGCCGAGAAGACCGTCGAGCTGAAGCCCGACTGGGCTAAGGGGTACTCCCGCCTCGGAGCCGCCCACCTCGGCCTCGGCGACGCCGCGAGCGCCGTCGCCGCCTACGAGAAGGGCCTCGCCCTCGACCCCACCAACGAGGGCCTTAAGGCCGGCCTCGCCGATGCCAAGAAGGCGGCCGCCGCCCCGCCGCGCCGCCCGCCGCCCAGCGGCGTTGACGGCATAGGCCAGATGTTCCAGGGGCCCGAGCTCTGGACCAAGATCGCCTCCGACCCGACCACGCGCGCATACCTCGAGCAGCCCGACTTCATGCAGATGCTGCGGGATGTGCAGAGGAACCCCAGCAGCCTCAACATGTACCTCTCCGATCCCCGGATGATGCAGGTGCTCGGCCTCATGCTTAACATCAAGATCCAGAGACCAGAGGCCTCTGAATCGTCGCAGCCCAGCTCGTCGCCGCCGTCGCAGCCGCAGGAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB624320             [                      CCCTCCTCCCTCTCCTCCGGCCCCGCCGCCAGAGCCCTTCCAGAAGCTTCCGGAG CCCGCGCCGCCGATCTGATCGCCGCCGCGTGCCATGGCCGACGAGGCGAAGGCGAAGGGTAATGCGGCCTTCTCGGCCGGCCGCTACGAGGAGGCGGCGCGGCACTTCACTGACGCCATCGCGCTCGCCCCGGGTAACCACGTCCTCTACTCCAACCGCTCCGCCGCGCTCGCCTCGGTCCACCGCTACTCCGAGGCGCTCGCCGACGCCGAGAAGACCGTCGAGCTGAAGCCCGACTGGGCTAAGGGGTACTCCCGCCTCGGAGCCGCCCACCTCGGCCTCGGCGACGCCGCGAGCGCCGTCGCCGCCTACGAGAAGGGCCTCGCCCTCGACCCCACCAACGAGGGCCTTAAGGCCGGCCTCGCCGATGCCAAGAAGGCGGCCGCCGCCCCGCCGCGCCGCCCGCCGCCCAGCGGCGTTGACGGCATAGGCCAGATGTTCCAGGGGCCCGAGCTCTGGACCAAGATCGCCTCCGACCCGACCACGCGCGCATACCTCGAGCAGCCCGACTTCATGCAGATGCTGCGGGATGTGCAGAGGAACCCCAGCAGCCTCAACATGTACCTCTCCGATCCCCGGATGATGCAGGTGCTCGGCCTCATGCTTAACATCAAGATCCAGAGACCAGAGGCCTCTGAATCGTCGCAGCCCAGCTCGTCGCCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C29139               [                            TCCCTCTCCTCCGGCCCCGCCGCCAGAGCCCTTCCAGAAGCTTCCGGAG CCCGCGCCGCCGATCTGATCGCCGCCGCGTGCNATGGCCGACGAGGCGAAGGCGAAGGGTAATGCGGCCTTCTCGGCCGGCCGCTACGAGGAGGCGGCGCGGCACTTCACTNACGNCATCGCGCTCGCCCCGGGGAACCACGTCCTCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OS40143              [                                                 ctCAGAGCCCTTCCAGAAGCTTCCGGAGTCCCGCGCCGCCGATCTGATCGCCGCCGCGTGCCATGGCCGACGAGGCGAAGGCGAAGGGTAATGCGGCCTTCTCGGCCGGCCGCTACGAGGAGGCGGCGC GCACTTCACTGACGCCATCGCGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL C26452               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAGTACGATGAATGCATTAAGGACTGTNATAAGGCTGTGGAGAGGGGAAGGGAACTTCGTGCTGATTTCAAGATGATCTCAAGGGCACTGACAAGAAAAGGAACAGCCCTAGCCAAACTTGCTAAGACCTCTAAGGACTATNACATTGCCATTGAGACTTTCCAGAAGGCTCTAACTGAGCATCGGAATCCAGACACTCTAAAAAAGCTAAATNAGGCTGAGAGGGCAAAGAAAGAGTTGGAGCAACAAGAGTACTATGATCCAAAGTTAGCAGATGAAGGAGAGAGAGAAAGGTAATCAGCTTTTCAAGGAGCAAAAATAT CCAGGCGCGGTAAAGCATTACACTGAGGCTATCAGGNG AATCCTAAGGACCCG ANGTGTACAGCAATAGGGCTGCATGCTNCACCAAGTTNGGAGCCATGCCTa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF323675             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAAGGGCACTGACAAGAAAAGGAACAGCCCTAGCCAAACTTGCTAAGACCTCTAAGGACTATGACATTGCCATTGAGACTTTCCAGAAGGCTCTAACTGAGCATCGGAATCCAGACACTCTAAAAAAGCTAAATGAGGCTGAGAGGGCAAAGAAAGAGTTGGAGCAACAAGAGTACTATGATCCAAAGTTAGCAGATGAA GAGAGAGAGAAAGGTAATCAGCTTTTCAAGGAGCAAAAATAT CCAGACGCGGTAAAGCATTACACTGAGGCTATCAGGAGAAATCCTAAGGACCCGAAGGTGTACAGCAATAGGGCTGCATGCTACACCAAGTTGGGAGCCATGCCTGAAGGTCTTAAAGATGCAGAGAAGTGCATTGAACTAGATCCCACCTTCTCCAAAGGGTATACAAGGGAAAGGGTGCAATTCAGTTTTTCATGAAAGAATATGACAAGGCAATGGAAACTTACCAGGCCGGTTTGAAGCATGATCCGAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB663561             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAAAGAGTTGGAGCAACAAGAGTACTATGATCCAAAGTTAGCAGATGAA GAGAGAGAGAAAGGTAATCAGCTTTTCAAGGAGCAAAAATAT CCAGACGCGGTAAAGCATTACACTGAGGCTATCAGGAGAAATCCTAAGGACCCGAAGGTGTACAGCAATAGGGCTGCATGCTACACCAAGTTGGGAGCCATGCCTGAAGGTCTTAAAGATGCAGAGAAGTGCATTGAACTAGATCCCACCTTCTCCAAAGGGTATACAA GGAAA GGTGCAATTCAGTTTTTCATGAAAGAATATGACAAGGCAATGGAAACTTTCCAGGCCGGTTTGAAGCATGATCCGAATAACCCGGAACTGCTGGACGGTGTGA AAAGGTGTATCGAACAGATCAACAAGGCCAACAGGGGTGATTTGACTCAGGAAGAGATTCAGGAACGACAGAACAAGGCTATGCAGGATCCAGAGATCCAGAATATTTTTACAGATCCCATCATGCGACAGGTACTGGTCGATTTGCAGGAGAACCCTAGGGCTTTTCAGGAGCATCTTAAGAACCCTGGAGTGATGCAGAAGATTCAGAAGCTTGTAAGCGCTGGAATAGTTCAAATGAGATAGTCGCCCAAAGCAAGAAGCGCTGTTCGTGTCTA TGTTCATTGCTCCTTACTTTTTTTCCACGTTCAGTCTTTGGGGACTTAAGATTTACTCA GTGGGGGGCTAATTTTCATTGTC                                                                                                                                                                                    ]
[-] EMBL CB646111             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TAGCAGATGAA GAGAGAGAGAAAGGTATTCAGCTTTTCAAGGAGCAAAAATAT CCAGACGCGGTAAAGCATTACACTGAGGCTATCAGGAGAAATCCTAAGGACCCGAAGGTGTACAGCAATAGGGCTGCATGCTACACCAAGTTGGGAGCCATGCCTGAAGGTCTTAAAGATGCAGAGAAGTGCATTGAACTAGATCCCACCTTCTCCAAAGGGTATACAA GGAAA GGTGCAATTCAGTTTTTCATGAAAGAATATGACAAGGCAATGGAAACTTACCAGGCCGGTTTGAAGCATGATCCGAATAACCCGGAACTGCTGGACGGTGTGA AAAGGTGTATCGAACAGATCAACAAGGCCAACAGGGGTGATTTGACTCAGGAAGAGATTCAGGAACGACAGAACAAGGCTATGCAGGATCCAGAGATCCAGAATATTCTTACAGATCCCATCATGCGACAGGTACTGGTCGATTTGCAGGAGAACCCTAGGGCTTCTCAGGAGCATCTTAAGAACCCTGGAGTGATGCAGAAGATTCAGAAGCTTGTAAGCGCTGGAATAGTTCAAATGAGATAGTCGACCAAAGCAAGAAGCGCTGTTCGTGTCTA TGTTCATTGCTCCTTACTTTTTTTCCATGCTCAGTCTTTGTGGACTTAAGATTTACACA GTTTGGGGCTAATCTTCATTCTCAATTGGATTATGTGAGTG CAGCGTGTCACTGGATTATTAGTGGTTAGGGCATCCGTGCTACAGCTGCACGTGC AAACGTATGTCTCTATTTGTTAGTCCTAAACATTTTCCCTTCCG AGGAAAATAGACCCATAAGAGG                                      ]
[-] EMBL CB624321             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAGAAAGGTAATCAGCTTTGCAAGGAGCAAAAATAT CCAGACGCGGTAAAGCATTACACTGAGGCTATCAGGAGAAATCCTAAGGACCCGAAGGTGTACAGCAATAGGGCTGCATGCTACACCAAGTTGGGAGCCATGCCTGAAGGTCTTAAAGATGCAGAGAAGTGCATTGAACTAGATCCCACCTTCTCCAAAGGGTATACAA GGAAA GGTGCAATTCAGTTTTTCATGAAAGAATATGACAAGGCAATGGAAACTTACCAGGCCGGTTTGAAGCATGATCCGAATAACCCGGAACTGCTGGACGGTGTGA AAAGGTGTATCGAACAGATCAACAAGGCCAACAGGGGTGATTTGACTCAGGAAGAGATTCAGGAACGACAGACCAAGGCTATGCAGGATCCAGAGATCCAGAATATTCTTACAGATCCCATCATGCGACAGGTACTGGTCGATTTGCAGGAGAACCCTAGGGCTTCTCAGGAGCATCTTAAGAACCCTGGAGTGATGCAGAAGATTCAGAAGCTTGTAAGCGCTGGAATAGTTCAAATGAGATAGTCGACCAAAGCAAGAAGCGCTGTTCGTGTCTA TGTTCATTGCTCCTTACTTTTTTTCCATGCTCAGTCTTTGTGGACTTAAGATTTACACA GTTTGGGGCTAATCTTCATTCTCAATTGGATTATGTGAGTG CAGCGTGTCACTGGATTATTAGTGGTTATGGCATCCGTGCTACAGCTGCACGGGC AAACGTATGTCTCTATTTGTTAGTCCTAAACATTTTCCCTACCGAATGAAAATATTGCCATAAGAGGTGCAGCAATAAAAAAGGGA                   ]
[-] EMBL C27395               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAAGGAGCAACNATATCCCAGACGCGGTTAANCATTACACTGAGGCTATCAGGAGAAATCCTAAGGACCCGAAGNTGTACAGCAATAGGGCTGCATGCTACACCAAGTTGGGAGCCATGCCTGAAGGTCTTAAAGATGCAGAGAAGTGCATTGAACTAGATCCCACCTTCTCCAAAGGGTATACAA GGAAA GGTGCAATTCAGTTTTTCATGANAGAATATGACAAGGCAATGGAAACTTACCAGGCCGGTTTGAAGCATGATCCGAATAACCCGGAACTGCTGGACGGTGTGA AAAGGTGTATCGAACAGATCAACAAGGCCAACAGGGGTGATTTGACTCAGGAAGAGATTCAGGAACGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BQ906675             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAGGCCGGTTTGAAGCATGATCCGAATAACCCGGAACTGCTGGACGGTGTGAGAAAGGTGTATCGAACAGATCAACAAGGCCAACAGGGGTGATTTGACTCAGGAAGAGATTCAGGAACGACAGAACAAGGCTATGCAGGATCCAGAGATCCAGAATATTCTTACAGATCCCATCATGCGACAGGTACTGGTCGATTTGCAGGAGAACCCTAGGGCTTCTCAGGAGCATCTTAAGAACCCTGGAGTGATGCAGAAGATTCAGAAGCTTGTAAGCGCTGGAATAGTTCAAATGAGATAGTCGACCCAAGCAAGAAGCGCTGTTCGTGTCTACTGTTCATTGCTCCTTACTTTTTTTCCATGCTCAGTCTTTGTGGACTTAAGATTTACACA GTTTGGGGCTAATCTTCATTCTCAATTGGATTATGTGAGTG CAGCGTGTCACTGGATTATTAGTGGTTATGGCATCCGTGCTACAGCTGCACGGGC AAACGTATGTCTCTATTTGTTAGTCCTAAACATTTTCCCTACCGAATGAAAATATTGCCATAAGAGGTTCAGAAATAAAAAAaa                     ]
[+] EMBL BI797703             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTATCGAACAGATCAACAAGGCCAACAGGGGTGATTTGACTCAGGAAGAGATTCAGGAACGACAGAACAAGGCTATGCAGGATCCAGAGATCCAGAATATTCTTACAGATCCCATCATGCGACAGGTACTGGTCGATTTGCAGGAGAACCCTAGGGCTTCTCAGGAGCATCTTAAGAACCCTGGAGTGATGCAGAAGATTCAGAAGCTTGTAAGCGCTGGAATAGTTCAAATGAGATAGTCGACC AAGCAAGAAGCGCTGTTCGTGTCTA TGTTCATTGCTCCTTACTTTTTTTCCATGCTCAGTCTTTGTGGACTTAAGATTTACACA GTTTGGGGCTAATCTTCATTCTC ATTGGATTATGTGAGTG CAGCGTGTCACTGGATTATTAGTGGTTATGGCATCCGTGCTACAGCTGCACGGGC AAACGTATGTCTCTATTTGTTAGTCCTAAACATTTTCCCTACCGAATGAAAATATTGCCATAAGAGGT CAGAAATAAAAA                        ]
[+] EMBL AK059659             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GATCCCATCATGCGACAGGTACTGGTCGATTTGCAGGAGAACCCTAGGGCTTCTCAGGAGCATCTTAAGAACCCTGGAGTGATGCAGAAGATTCAGAAGCTTGTAAGCGCTGGAATAGTTCAAATGAGATAGTCGACCAAAGCAAGAAGCGCTGTTCGTGTCTA TGTTCATTGCTCCTTACTTTTTTTCCATGCTCAGTCTTTGTGGACTTAAGATTTACACA GTTTGGGGCTAATCTTCATTCTCAATCGGATTATGTGAGTG CAGCGTGTCACTGGATTATTAGTGGTTATGGCATCCGTGCTACAGCTGCACGTGC AAACGTATGTCTCTATTTGTTAGTCCTAAACATTTTCCCTACCGAATGAAAATAGAGCCATAAGAGGTGCAGAAATAgtc                         ]
[+] EMBL AU092316             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTTGCAGGAGAACCCTAGGGCTTCTCAGGAGCATCTTAAGAACCCTGGAGTGATGCAGAAGATTCAGAAGCTTGTAAGCGCTGGAATAGTTCAAATGAGATAGTCGACCAAAGCAAGAAGCGCTGNTCGTGTCTA TGTNCATTGCTCCTTACTTTTTTTCCATGCTCAGTCTTTGTGGACTTAAGATTTACACA GTTTGGGGCTAATCTTCATTCTCAATTGGATTATGTGAGTG CAGCGTGTCACTGGATTATTAGTGGTTATGGNATCCGTGCTACAGCTGCACGTGC AAACGTATGTCTCTATTTGTTAGTCCTAAACATTTTCCCTNCCGAATGAAAATAGAGCCATAAGAGGTGCAGA                                ]
[+] EMBL BI800058             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTCAGAAGCTTGTAAGCGCTGGAATAGTTC AATGAGATAGTCGACC AAGC AGAAGCGCTGTTCGTGTCTA TGTTCATTGCTCCTTACTTTTTTTCCATGCTCAGTCTTTGTGGACTTAAGATTTACACACGTTTGGGGCTAATCTTCATTCTC ATTGGATTATGTGAGTG CAGCGTGTCACTGGATTATTAGTGGTTATGGCATCCGTGCTACAGCTGCACGGGC  AACGTATGTCTCTATTTGTTAGTCCTAAACATTTTCCCTACCGAATGAAAATATTGCCATAAGAGGTGCAGAAATAGTCGATTGCTTTTATTTTAAAAAAAAAA]
[-] EMBL AA750366             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               aACCAAAGC AGAAGCGCTGTTCGTGTCTA TGTTGA   CTCCTTACTTTTTTTCCATGCTCAGTCTTTGTGGANTTAAGATTTACACA GTTTGGGGCTAATCTTCATTCTCAATTGGATTATGTGAGNGACAGCGTGTCACTGGATTATTAGTGGTTATGGNAT CGTGCTACAGCTGCACGNGCAAAACGTATGTCTCTATTTGTTAGTCCTAAACATTTTCCCT                                                                 ]




>consensus_14885#0
ATCTAACCCCAGACTTTTCCTCCCCTCCTCCCTCTCCTCCGGCCCCGCCGCCAGAGCCCT
TCCAGAAGCTTCCGGAGCCCGCGCCGCCGATCTGATCGCCGCCGCGTGCCATGGCCGACG
AGGCGAAGGCGAAGGGTAATGCGGCCTTCTCGGCCGGCCGCTACGAGGAGGCGGCGCGGC
ACTTCACTGACGCCATCGCGCTCGCCCCGGGGAACCACGTCCTCTACTCCAACCGCTCCG
CCGCGCTCGCCTCGGTCCACCGCTACTCCGAGGCGCTCGCCGACGCCGAGAAGACCGTCG
AGCTGAAGCCCGACTGGGCTAAGGGGTACTCCCGCCTCGGAGCCGCCCACCTCGGCCTCG
GCGACGCCGCGAGCGCCGTCGCCGCCTACGAGAAGGGCCTCGCCCTCGACCCCACCAACG
AGGGCCTTAAGGCCGGCCTCGCCGATGCCAAGAAGGCGGCCGCCGCCCCGCCGCGCCGCC
CGCCGCCCAGCGGCGTTGACGGCATAGGCCAGATGTTCCAGGGGCCCGAGCTCTGGACCA
AGATCGCCTCCGACCCGACCACGCGCGCATACCTCGAGCAGCCCGACTTCATGCAGATGC
TGCGGGATGTGCAGAGGAACCCCAGCAGCCTCAACATGTACCTCTCCGATCCCCGGATGA
TGCAGGTGCTCGGCCTCATGCTTAACATCAAGATCCAGAGACCAGAGGCCTCTGAATCGT
CGCAGCCCAGCTCGTCGCCGCCGTCGCAGCCGCAGGAGCAGCCCGAGGCGAAGGCGAGGG
AGGTGGAGCCAGAGCCTGAGCCGGAGCCGATGGAGGTGACCGATGAGGAGAAGGAGCGGA
AGGAGAGGAAATCGTCTGCTCAGAAGGAGAAGGAAGCGGGGAACGCAGCTTACAAGAAAA
AGGACTTCGAGACCGCGATCCAGCATTACACAAAAGCCATGGAACTTGATGATGAGGACA
TTTCCTATCTTACCAACCGTGCAGCGGTCTACATTGAGATGGGAAAGTACGATGAATGCG
TTAAGGACTGTGATAAGGCTGTGGAGAGGGGAAGGGAACTTCGTGCTGATTTCAAGATGA
TCTCAAGGGCACTGACAAGAAAAGGAACAGCCCTAGCCAAACTTGCTAAGACCTCTAAGG
ACTATGACATTGCCATTGAGACTTTCCAGAAGGCTCTAACTGAGCATCGGAATCCAGACA
CTCTAAAAAAGCTAAATGAGGCTGAGAGGGCAAAGAAAGAGTTGGAGCAACAAGAGTACT
ATGATCCAAAGTTAGCAGATGAAGAGAGAGAGAAAGGTAATCAGCTTTTCAAGGAGCAAA
AATATCCAGACGCGGTAAAGCATTACACTGAGGCTATCAGGAGAAATCCTAAGGACCCGA
AGGTGTACAGCAATAGGGCTGCATGCTACACCAAGTTGGGAGCCATGCCTGAAGGTCTTA
AAGATGCAGAGAAGTGCATTGAACTAGATCCCACCTTCTCCAAAGGGTATACAAGGAAAG
GTGCAATTCAGTTTTTCATGAAAGAATATGACAAGGCAATGGAAACTTACCAGGCCGGTT
TGAAGCATGATCCGAATAACCCGGAACTGCTGGACGGTGTGAAAAGGTGTATCGAACAGA
TCAACAAGGCCAACAGGGGTGATTTGACTCAGGAAGAGATTCAGGAACGACAGAACAAGG
CTATGCAGGATCCAGAGATCCAGAATATTCTTACAGATCCCATCATGCGACAGGTACTGG
TCGATTTGCAGGAGAACCCTAGGGCTTCTCAGGAGCATCTTAAGAACCCTGGAGTGATGC
AGAAGATTCAGAAGCTTGTAAGCGCTGGAATAGTTCAAATGAGATAGTCGACCAAAGCAA
GAAGCGCTGTTCGTGTCTATGTTCATTGCTCCTTACTTTTTTTCCATGCTCAGTCTTTGT
GGACTTAAGATTTACACAGTTTGGGGCTAATCTTCATTCTCAATTGGATTATGTGAGTGC
AGCGTGTCACTGGATTATTAGTGGTTATGGCATCCGTGCTACAGCTGCACGTGCAAACGT
ATGTCTCTATTTGTTAGTCCTAAACATTTTCCCTACCGAATGAAAATAGAGCCATAAGAG
GTGCAGAAATAAAAAAGGGATTTTATTTTAAAAAAAAAA

consensusID : consensus_14885#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 215
fasta sequence 
                              [ATGGATTGAAGGAGTAGAAATGGATTATGTGAGTGCAGCGTGTCACTGGATTATTAGTGGTTATGGCATCCGTGATACAGCTGCACGTGCAAACGTATGTATCTATTTGTTAGTCCTAAACATTTTCCAAACAAAATAAAAATAGAGCCATAAAAGGAACAAAAAAAAAAAAAAAAAACACTGTCATGCCGCTCTGTCATGCCGTTACGTAACCA]

[-] EMBL CF327816             [ATGGATTGAAGGAGTAGAAATGGATTATGTGAGTGCAGCGTGTCACTGGATTATTAGTGGTTATGGCATCCGTGATACAGCTGCACGTGCAAACGTATGTATCTATTTGTTAGTCCTAAACATTTTCCAAACAAAATAAAAATAGAGCCATAAAAGGAACAAAAAAAAAAAAAAAAAACACTGTCATGCCGCTCTGTCATGCCGTTACGTAACCA]




>consensus_14885#1
ATGGATTGAAGGAGTAGAAATGGATTATGTGAGTGCAGCGTGTCACTGGATTATTAGTGG
TTATGGCATCCGTGATACAGCTGCACGTGCAAACGTATGTATCTATTTGTTAGTCCTAAA
CATTTTCCAAACAAAATAAAAATAGAGCCATAAAAGGAACAAAAAAAAAAAAAAAAAACA
CTGTCATGCCGCTCTGTCATGCCGTTACGTAACCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14885#0      ATCTAACCCCAGACTTTTCCTCCCCTCCTCCCTCTCCTCCGGCCCCGCCGCCAGAGCCCT 60
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      TCCAGAAGCTTCCGGAGCCCGCGCCGCCGATCTGATCGCCGCCGCGTGCCATGGCCGACG 120
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      AGGCGAAGGCGAAGGGTAATGCGGCCTTCTCGGCCGGCCGCTACGAGGAGGCGGCGCGGC 180
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      ACTTCACTGACGCCATCGCGCTCGCCCCGGGGAACCACGTCCTCTACTCCAACCGCTCCG 240
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      CCGCGCTCGCCTCGGTCCACCGCTACTCCGAGGCGCTCGCCGACGCCGAGAAGACCGTCG 300
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      AGCTGAAGCCCGACTGGGCTAAGGGGTACTCCCGCCTCGGAGCCGCCCACCTCGGCCTCG 360
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      GCGACGCCGCGAGCGCCGTCGCCGCCTACGAGAAGGGCCTCGCCCTCGACCCCACCAACG 420
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      AGGGCCTTAAGGCCGGCCTCGCCGATGCCAAGAAGGCGGCCGCCGCCCCGCCGCGCCGCC 480
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      CGCCGCCCAGCGGCGTTGACGGCATAGGCCAGATGTTCCAGGGGCCCGAGCTCTGGACCA 540
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      AGATCGCCTCCGACCCGACCACGCGCGCATACCTCGAGCAGCCCGACTTCATGCAGATGC 600
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      TGCGGGATGTGCAGAGGAACCCCAGCAGCCTCAACATGTACCTCTCCGATCCCCGGATGA 660
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      TGCAGGTGCTCGGCCTCATGCTTAACATCAAGATCCAGAGACCAGAGGCCTCTGAATCGT 720
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      CGCAGCCCAGCTCGTCGCCGCCGTCGCAGCCGCAGGAGCAGCCCGAGGCGAAGGCGAGGG 780
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      AGGTGGAGCCAGAGCCTGAGCCGGAGCCGATGGAGGTGACCGATGAGGAGAAGGAGCGGA 840
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      AGGAGAGGAAATCGTCTGCTCAGAAGGAGAAGGAAGCGGGGAACGCAGCTTACAAGAAAA 900
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      AGGACTTCGAGACCGCGATCCAGCATTACACAAAAGCCATGGAACTTGATGATGAGGACA 960
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      TTTCCTATCTTACCAACCGTGCAGCGGTCTACATTGAGATGGGAAAGTACGATGAATGCG 1020
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      TTAAGGACTGTGATAAGGCTGTGGAGAGGGGAAGGGAACTTCGTGCTGATTTCAAGATGA 1080
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      TCTCAAGGGCACTGACAAGAAAAGGAACAGCCCTAGCCAAACTTGCTAAGACCTCTAAGG 1140
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      ACTATGACATTGCCATTGAGACTTTCCAGAAGGCTCTAACTGAGCATCGGAATCCAGACA 1200
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      CTCTAAAAAAGCTAAATGAGGCTGAGAGGGCAAAGAAAGAGTTGGAGCAACAAGAGTACT 1260
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      ATGATCCAAAGTTAGCAGATGAAGAGAGAGAGAAAGGTAATCAGCTTTTCAAGGAGCAAA 1320
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      AATATCCAGACGCGGTAAAGCATTACACTGAGGCTATCAGGAGAAATCCTAAGGACCCGA 1380
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      AGGTGTACAGCAATAGGGCTGCATGCTACACCAAGTTGGGAGCCATGCCTGAAGGTCTTA 1440
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      AAGATGCAGAGAAGTGCATTGAACTAGATCCCACCTTCTCCAAAGGGTATACAAGGAAAG 1500
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      GTGCAATTCAGTTTTTCATGAAAGAATATGACAAGGCAATGGAAACTTACCAGGCCGGTT 1560
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      TGAAGCATGATCCGAATAACCCGGAACTGCTGGACGGTGTGAAAAGGTGTATCGAACAGA 1620
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      TCAACAAGGCCAACAGGGGTGATTTGACTCAGGAAGAGATTCAGGAACGACAGAACAAGG 1680
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      CTATGCAGGATCCAGAGATCCAGAATATTCTTACAGATCCCATCATGCGACAGGTACTGG 1740
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      TCGATTTGCAGGAGAACCCTAGGGCTTCTCAGGAGCATCTTAAGAACCCTGGAGTGATGC 1800
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      AGAAGATTCAGAAGCTTGTAAGCGCTGGAATAGTTCAAATGAGATAGTCGACCAAAGCAA 1860
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      GAAGCGCTGTTCGTGTCTATGTTCATTGCTCCTTACTTTTTTTCCATGCTCAGTCTTTGT 1920
consensus_14885#1      ------------------------------------------------------------
                                                                                   

consensus_14885#0      GGACTTAAGATTTACACAGTTTGGGGCTAATCTTCATTCTCAATTGGATTATGTGAGTGC 1980
consensus_14885#1      --------------------ATGGATTGAAGGAGTAG----AAATGGATTATGTGAGTGC 36
                                            ***    **     *     ** ****************

consensus_14885#0      AGCGTGTCACTGGATTATTAGTGGTTATGGCATCCGTGCTACAGCTGCACGTGCAAACGT 2040
consensus_14885#1      AGCGTGTCACTGGATTATTAGTGGTTATGGCATCCGTGATACAGCTGCACGTGCAAACGT 96
                       ************************************** *********************

consensus_14885#0      ATGTCTCTATTTGTTAGTCCTAAACATTTTCCCTACCGAATGAAAATAGAGCCATAAGAG 2100
consensus_14885#1      ATGTATCTATTTGTTAGTCCTAAACATTTTCCAAACAAAATAAAAATAGAGCCATAAAAG 156
                       **** ***************************  **  *** *************** **

consensus_14885#0      GTGCAGAAATAAAAAAGGGATTTTATTTTAAAAAAAAAA-------------------- 2139
consensus_14885#1      GAACAAAAAAAAAAAAAAAAAACACTGTCATGCCGCTCTGTCATGCCGTTACGTAACCA 215
                       *  ** *** ******   *     * * *


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)