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Oryza sativa
cluster # 1492 cluster # 1492       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1492#0 length = 3366 sequences # 1  
 consensus_1492#1 length = 1362 sequences # 1  
consensusID : consensus_1492#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3366
fasta sequence 
                              [TCCTCCTGTACAGTTGCATTCGGGTGAAATCCAATTTTGAGGACCACGACGCGAAATCCCAATTTTCCCCACCAGCCGCCGCCGCCTCGGCCAATGCGCCGCCGCGCCGATGCTGCTCTGCACGGCCACCGCGCGCGTGAACCGTTGCCTCGCCTCGATCGGTCTCGCCCGCTCCACTTTCACGCCGCCACCCGCACCTTCGCTCGATGAGGGTTAGAGCCTCTCCACCTCCCTTCCCCCAATCCCAATCCGCTCTCGCGTCTCACTGCGCATCATGGCCGGATTGGCGGTGGCTGGCCGCTCGCTTGACGAGGCGTTCGAGGTGACCAGCGCGGTGGACAACATCGGCGCCTGGGGGTGGCTCGACGTGCAGGGATGTCGGCGGAGTTTGAAGCGGCTGGGCACCCGATCGAGCATGAGGCGAGCATGGCTGGACCGCGCCGTGGACTCGGAGGGCAAGTCTCACGCGCGCGACATCGTCCGGGAGATCATCTCCCGCGGCACGGATGATTGGATAGCGCGGCGGTGAACATGGAGTGGGGCGATGGCCCCGACGCCATCTCCGCCGCCACCGACGAGCTCGACCAAAGCGCGCTTGGGTGGCGGAGCGCGACCTGCCCCCCAACCCCCACCCACCTCACCTACATCGACGGGGCGGCGTCGCGTTCGTGGCCGCTCCACGCCAGGCAGCACACGGTGGTCGCCGCCGGCTACGACGTCCCCACGGGCGCGCTCGACCATGCGTCCTCTCGCCAGCCGCCACTCGGCGGCATGCGCCGCTATCACTTCAAGTTCAAGCTGCTATCGTTCGGGGTCAGAGCGGCGGATGTTCCACCTGTCGATGAAGATGGCGGCGCCTGGGGGTGAACAAGCATCGACGGCGACGGCGGCGGCGGTGGTGGCGGCGGCGGCGGCGGCCGACGCGGTGGGGGACAGAGAGGGTGTGGGTGTGTGGATCGGCTGAGCGAGCCCAACATGCTCGTTTAGCCCGGCCCAGTTATCAAGAAGAGGGGCACCAGATGCGCCCAATCCCAAGACAACCATTTTTCCCAAGGAAAAAAAAAGGAAAGGAAAAAAAAAACAATCGTCTTCAAGCTTCGGGTTCCCGCTCAGCGCGGCAGCGGAACCAAGCCGAGGGAGCTCGACTCATCGACGATCACGGTGTCCAGTACTTTGGAAGAATCAGCCTATCCTGCCCGCACCCGCCATCTAGTTTCTGGAGGATACTATTCCGCCGAGGATAATTTGCTGACCTTGTTGCTGTTGGAGGAAGTATCTTAGTGTTGATAATGGGCAGGCGCAAAAAGAAAACACCAGCTCTCACACCGAGGAACACAGTAACTCTATATCTTGATGGAACAGAACATGAATTTGTTGAGAACTTCATACATTGCCAGGGGCACTACAGATTCTGGCTCCTGTGGAATTCTGCTTTCAGGGTAACATATAGCCGAATGATGCTATATACAACACCAGTCCACGGGACATTCTATTATGTCCTTAGGTATGAAGCAGAATACGTTGTACTAGTGATTGATGCTAGAACTGGCTGGCTTGTTGGGTTCTTCAACAACAGAGGCATTTATGAGATGCGGTCTGATGATAATCTTGGGAGTTATATGAATTCGTCACAATGTCATAAGCTTCCGTTCAATGGAAATCATAAGGAAATATCCCCACATGGGACAGAAAATACATGGCTGAATCTGCAACTGTTCAAAAAATGTTTTCGTTATCTTTCCTCTTATCAGCCTAGCAACAGAAGAGTCCCAATTGGGTTCAAGATTTCATTGGGCATGATGGTCGTAATGTTTTTGGAATCAAAATTCAAAATGGTGCATAAAAAGGATATGCCATGCCATGGAGCATGGTACGGGGTCACGGTTAGGTGATGGTTTTGAATGGGTCAAGAGGCTAATCGTCAATTGGAGTTCAATCAGCCAACAGGTTATGAGGTCTCTTAGCAATCAAAGATACAATCCCCACGATTGTGGCATAAGAGAATTGCTTACTTTTGATGATCTACACTCTTTTTGCTCTCAGGAGTTTATCACTGACCCAGTGAACAGGTTATCAGATAGAATTGACAGCGAATATGTCTTGCTTGTGAATCCTGCAATGCCACATCTGCTAGGAAACTCCTCAGATGCTACTGATCTTGATTGTACCAATCAACTTGTGGAGAATCATCCTAAGCTGCCTGACCAAAATTTATCAGCACAAGCTCAGATAGACGGTGATACAATTAATGAAGCACCACAAGCTCTTCCCACAAGTGTTGGTTCTCAGATTGGCGGCTGTTCAGTAGATGAAACACTGCAGGCTCTCCCCGCTAGCAGTTCTCTGATAAGCAGCAACACAGAAAATCTATCACCCCAGGCTCTCCCAACAAGCAGTGAATCAGCGGCAGGAGTGACGATAGATGACCTACGCTCTCTTTGCTCTCAGGAGTTTTTCACTGACCCAGTTGTGGTCCATGCTTTCAACAGGTTATCAGATAGAATTGACAGCGAAGATGTGTTGCTTGTGAATCCTGCAATGTCACATCTACTAGGAAACTCAGATGCTACTGTTGTGTCAACCCAGCTACAGAGTCTAGGACTCCCCTCTCGAAAACTAGTCCTTTTTTCCAGTGAACAGTCAGGATCCCCATCTGTTGGGTGAAGGTACACACTGGAGCCTCCTAGTGTTTGACCGCAACCTTGGAGGCAGACCATGCTTAGCCCACCATGACAGCAGTCCTGGTGATGCTAATTTGAGAGCTGCACGCCGTCTTGCGGCATCACTGCTTCCTTACCTACCTCCTGAGACGAAATGCACTAAAGCTCCGACACCTAAGCAAAACAATGGAACCGAATGTGCCCTTTACATGATTAAATGTGCTGAGGTGATCTGTGGTTGGTGGCGAAACCACGCTGCTGGAGGATCAGAGTCGCATTGGCTTGGAGTTGTGGCCCGAGGTGTTACCATGGACAGCGTGGACAACTTGAGGGCACAGCTAATCCATGATATTGGACAGCTCCTCAACGGCTCATCATCATCATAGAGTCATACTCTTACTTGTGTATGCTTGTGCTATTGTTGTGATTACACTTTGCCGCCTTCCAACCGGAAGGTTCTCATATTCACCCTTTGCCGCCTTTGAACCGCCGACCAAGTGTTCCTTTCTCACAATTCAATGATCCGAAAGGTGATCACTCATGAAAAAATTGGTTCAAGTCTGGTCAGGCCACTGCAACTTAATGGGAAAATGCCGCAAAACTGCAAGTTTTCAGGTAGGTGCTTGTAACTCAATCTCAGAGTTGTCATGAGGCCACTGTAACCTTTTGTAATCAGGTCAACGTCGTTGTTTTCTATATCGAAAGT]

[+] EMBL AK119271             [TCCTCCTGTACAGTTGCATTCGGGTGAAATCCAATTTTGAGGACCACGACGCGAAATCCCAATTTTCCCCACCAGCCGCCGCCGCCTCGGCCAATGCGCCGCCGCGCCGATGCTGCTCTGCACGGCCACCGCGCGCGTGAACCGTTGCCTCGCCTCGATCGGTCTCGCCCGCTCCACTTTCACGCCGCCACCCGCACCTTCGCTCGATGAGGGTTAGAGCCTCTCCACCTCCCTTCCCCCAATCCCAATCCGCTCTCGCGTCTCACTGCGCATCATGGCCGGATTGGCGGTGGCTGGCCGCTCGCTTGACGAGGCGTTCGAGGTGACCAGCGCGGTGGACAACATCGGCGCCTGGGGGTGGCTCGACGTGCAGGGATGTCGGCGGAGTTTGAAGCGGCTGGGCACCCGATCGAGCATGAGGCGAGCATGGCTGGACCGCGCCGTGGACTCGGAGGGCAAGTCTCACGCGCGCGACATCGTCCGGGAGATCATCTCCCGCGGCACGGATGATTGGATAGCGCGGCGGTGAACATGGAGTGGGGCGATGGCCCCGACGCCATCTCCGCCGCCACCGACGAGCTCGACCAAAGCGCGCTTGGGTGGCGGAGCGCGACCTGCCCCCCAACCCCCACCCACCTCACCTACATCGACGGGGCGGCGTCGCGTTCGTGGCCGCTCCACGCCAGGCAGCACACGGTGGTCGCCGCCGGCTACGACGTCCCCACGGGCGCGCTCGACCATGCGTCCTCTCGCCAGCCGCCACTCGGCGGCATGCGCCGCTATCACTTCAAGTTCAAGCTGCTATCGTTCGGGGTCAGAGCGGCGGATGTTCCACCTGTCGATGAAGATGGCGGCGCCTGGGGGTGAACAAGCATCGACGGCGACGGCGGCGGCGGTGGTGGCGGCGGCGGCGGCGGCCGACGCGGTGGGGGACAGAGAGGGTGTGGGTGTGTGGATCGGCTGAGCGAGCCCAACATGCTCGTTTAGCCCGGCCCAGTTATCAAGAAGAGGGGCACCAGATGCGCCCAATCCCAAGACAACCATTTTTCCCAAGGAAAAAAAAAGGAAAGGAAAAAAAAAACAATCGTCTTCAAGCTTCGGGTTCCCGCTCAGCGCGGCAGCGGAACCAAGCCGAGGGAGCTCGACTCATCGACGATCACGGTGTCCAGTACTTTGGAAGAATCAGCCTATCCTGCCCGCACCCGCCATCTAGTTTCTGGAGGATACTATTCCGCCGAGGATAATTTGCTGACCTTGTTGCTGTTGGAGGAAGTATCTTAGTGTTGATAATGGGCAGGCGCAAAAAGAAAACACCAGCTCTCACACCGAGGAACACAGTAACTCTATATCTTGATGGAACAGAACATGAATTTGTTGAGAACTTCATACATTGCCAGGGGCACTACAGATTCTGGCTCCTGTGGAATTCTGCTTTCAGGGTAACATATAGCCGAATGATGCTATATACAACACCAGTCCACGGGACATTCTATTATGTCCTTAGGTATGAAGCAGAATACGTTGTACTAGTGATTGATGCTAGAACTGGCTGGCTTGTTGGGTTCTTCAACAACAGAGGCATTTATGAGATGCGGTCTGATGATAATCTTGGGAGTTATATGAATTCGTCACAATGTCATAAGCTTCCGTTCAATGGAAATCATAAGGAAATATCCCCACATGGGACAGAAAATACATGGCTGAATCTGCAACTGTTCAAAAAATGTTTTCGTTATCTTTCCTCTTATCAGCCTAGCAACAGAAGAGTCCCAATTGGGTTCAAGATTTCATTGGGCATGATGGTCGTAATGTTTTTGGAATCAAAATTCAAAATGGTGCATAAAAAGGATATGCCATGCCATGGAGCATGGTACGGGGTCACGGTTAGGTGATGGTTTTGAATGGGTCAAGAGGCTAATCGTCAATTGGAGTTCAATCAGCCAACAGGTTATGAGGTCTCTTAGCAATCAAAGATACAATCCCCACGATTGTGGCATAAGAGAATTGCTTACTTTTGATGATCTACACTCTTTTTGCTCTCAGGAGTTTATCACTGACCCAGTGAACAGGTTATCAGATAGAATTGACAGCGAATATGTCTTGCTTGTGAATCCTGCAATGCCACATCTGCTAGGAAACTCCTCAGATGCTACTGATCTTGATTGTACCAATCAACTTGTGGAGAATCATCCTAAGCTGCCTGACCAAAATTTATCAGCACAAGCTCAGATAGACGGTGATACAATTAATGAAGCACCACAAGCTCTTCCCACAAGTGTTGGTTCTCAGATTGGCGGCTGTTCAGTAGATGAAACACTGCAGGCTCTCCCCGCTAGCAGTTCTCTGATAAGCAGCAACACAGAAAATCTATCACCCCAGGCTCTCCCAACAAGCAGTGAATCAGCGGCAGGAGTGACGATAGATGACCTACGCTCTCTTTGCTCTCAGGAGTTTTTCACTGACCCAGTTGTGGTCCATGCTTTCAACAGGTTATCAGATAGAATTGACAGCGAAGATGTGTTGCTTGTGAATCCTGCAATGTCACATCTACTAGGAAACTCAGATGCTACTGTTGTGTCAACCCAGCTACAGAGTCTAGGACTCCCCTCTCGAAAACTAGTCCTTTTTTCCAGTGAACAGTCAGGATCCCCATCTGTTGGGTGAAGGTACACACTGGAGCCTCCTAGTGTTTGACCGCAACCTTGGAGGCAGACCATGCTTAGCCCACCATGACAGCAGTCCTGGTGATGCTAATTTGAGAGCTGCACGCCGTCTTGCGGCATCACTGCTTCCTTACCTACCTCCTGAGACGAAATGCACTAAAGCTCCGACACCTAAGCAAAACAATGGAACCGAATGTGCCCTTTACATGATTAAATGTGCTGAGGTGATCTGTGGTTGGTGGCGAAACCACGCTGCTGGAGGATCAGAGTCGCATTGGCTTGGAGTTGTGGCCCGAGGTGTTACCATGGACAGCGTGGACAACTTGAGGGCACAGCTAATCCATGATATTGGACAGCTCCTCAACGGCTCATCATCATCATAGAGTCATACTCTTACTTGTGTATGCTTGTGCTATTGTTGTGATTACACTTTGCCGCCTTCCAACCGGAAGGTTCTCATATTCACCCTTTGCCGCCTTTGAACCGCCGACCAAGTGTTCCTTTCTCACAATTCAATGATCCGAAAGGTGATCACTCATGAAAAAATTGGTTCAAGTCTGGTCAGGCCACTGCAACTTAATGGGAAAATGCCGCAAAACTGCAAGTTTTCAGGTAGGTGCTTGTAACTCAATCTCAGAGTTGTCATGAGGCCACTGTAACCTTTTGTAATCAGGTCAACGTCGTTGTTTTCTATATCGAAAGT]




>consensus_1492#0
TCCTCCTGTACAGTTGCATTCGGGTGAAATCCAATTTTGAGGACCACGACGCGAAATCCC
AATTTTCCCCACCAGCCGCCGCCGCCTCGGCCAATGCGCCGCCGCGCCGATGCTGCTCTG
CACGGCCACCGCGCGCGTGAACCGTTGCCTCGCCTCGATCGGTCTCGCCCGCTCCACTTT
CACGCCGCCACCCGCACCTTCGCTCGATGAGGGTTAGAGCCTCTCCACCTCCCTTCCCCC
AATCCCAATCCGCTCTCGCGTCTCACTGCGCATCATGGCCGGATTGGCGGTGGCTGGCCG
CTCGCTTGACGAGGCGTTCGAGGTGACCAGCGCGGTGGACAACATCGGCGCCTGGGGGTG
GCTCGACGTGCAGGGATGTCGGCGGAGTTTGAAGCGGCTGGGCACCCGATCGAGCATGAG
GCGAGCATGGCTGGACCGCGCCGTGGACTCGGAGGGCAAGTCTCACGCGCGCGACATCGT
CCGGGAGATCATCTCCCGCGGCACGGATGATTGGATAGCGCGGCGGTGAACATGGAGTGG
GGCGATGGCCCCGACGCCATCTCCGCCGCCACCGACGAGCTCGACCAAAGCGCGCTTGGG
TGGCGGAGCGCGACCTGCCCCCCAACCCCCACCCACCTCACCTACATCGACGGGGCGGCG
TCGCGTTCGTGGCCGCTCCACGCCAGGCAGCACACGGTGGTCGCCGCCGGCTACGACGTC
CCCACGGGCGCGCTCGACCATGCGTCCTCTCGCCAGCCGCCACTCGGCGGCATGCGCCGC
TATCACTTCAAGTTCAAGCTGCTATCGTTCGGGGTCAGAGCGGCGGATGTTCCACCTGTC
GATGAAGATGGCGGCGCCTGGGGGTGAACAAGCATCGACGGCGACGGCGGCGGCGGTGGT
GGCGGCGGCGGCGGCGGCCGACGCGGTGGGGGACAGAGAGGGTGTGGGTGTGTGGATCGG
CTGAGCGAGCCCAACATGCTCGTTTAGCCCGGCCCAGTTATCAAGAAGAGGGGCACCAGA
TGCGCCCAATCCCAAGACAACCATTTTTCCCAAGGAAAAAAAAAGGAAAGGAAAAAAAAA
ACAATCGTCTTCAAGCTTCGGGTTCCCGCTCAGCGCGGCAGCGGAACCAAGCCGAGGGAG
CTCGACTCATCGACGATCACGGTGTCCAGTACTTTGGAAGAATCAGCCTATCCTGCCCGC
ACCCGCCATCTAGTTTCTGGAGGATACTATTCCGCCGAGGATAATTTGCTGACCTTGTTG
CTGTTGGAGGAAGTATCTTAGTGTTGATAATGGGCAGGCGCAAAAAGAAAACACCAGCTC
TCACACCGAGGAACACAGTAACTCTATATCTTGATGGAACAGAACATGAATTTGTTGAGA
ACTTCATACATTGCCAGGGGCACTACAGATTCTGGCTCCTGTGGAATTCTGCTTTCAGGG
TAACATATAGCCGAATGATGCTATATACAACACCAGTCCACGGGACATTCTATTATGTCC
TTAGGTATGAAGCAGAATACGTTGTACTAGTGATTGATGCTAGAACTGGCTGGCTTGTTG
GGTTCTTCAACAACAGAGGCATTTATGAGATGCGGTCTGATGATAATCTTGGGAGTTATA
TGAATTCGTCACAATGTCATAAGCTTCCGTTCAATGGAAATCATAAGGAAATATCCCCAC
ATGGGACAGAAAATACATGGCTGAATCTGCAACTGTTCAAAAAATGTTTTCGTTATCTTT
CCTCTTATCAGCCTAGCAACAGAAGAGTCCCAATTGGGTTCAAGATTTCATTGGGCATGA
TGGTCGTAATGTTTTTGGAATCAAAATTCAAAATGGTGCATAAAAAGGATATGCCATGCC
ATGGAGCATGGTACGGGGTCACGGTTAGGTGATGGTTTTGAATGGGTCAAGAGGCTAATC
GTCAATTGGAGTTCAATCAGCCAACAGGTTATGAGGTCTCTTAGCAATCAAAGATACAAT
CCCCACGATTGTGGCATAAGAGAATTGCTTACTTTTGATGATCTACACTCTTTTTGCTCT
CAGGAGTTTATCACTGACCCAGTGAACAGGTTATCAGATAGAATTGACAGCGAATATGTC
TTGCTTGTGAATCCTGCAATGCCACATCTGCTAGGAAACTCCTCAGATGCTACTGATCTT
GATTGTACCAATCAACTTGTGGAGAATCATCCTAAGCTGCCTGACCAAAATTTATCAGCA
CAAGCTCAGATAGACGGTGATACAATTAATGAAGCACCACAAGCTCTTCCCACAAGTGTT
GGTTCTCAGATTGGCGGCTGTTCAGTAGATGAAACACTGCAGGCTCTCCCCGCTAGCAGT
TCTCTGATAAGCAGCAACACAGAAAATCTATCACCCCAGGCTCTCCCAACAAGCAGTGAA
TCAGCGGCAGGAGTGACGATAGATGACCTACGCTCTCTTTGCTCTCAGGAGTTTTTCACT
GACCCAGTTGTGGTCCATGCTTTCAACAGGTTATCAGATAGAATTGACAGCGAAGATGTG
TTGCTTGTGAATCCTGCAATGTCACATCTACTAGGAAACTCAGATGCTACTGTTGTGTCA
ACCCAGCTACAGAGTCTAGGACTCCCCTCTCGAAAACTAGTCCTTTTTTCCAGTGAACAG
TCAGGATCCCCATCTGTTGGGTGAAGGTACACACTGGAGCCTCCTAGTGTTTGACCGCAA
CCTTGGAGGCAGACCATGCTTAGCCCACCATGACAGCAGTCCTGGTGATGCTAATTTGAG
AGCTGCACGCCGTCTTGCGGCATCACTGCTTCCTTACCTACCTCCTGAGACGAAATGCAC
TAAAGCTCCGACACCTAAGCAAAACAATGGAACCGAATGTGCCCTTTACATGATTAAATG
TGCTGAGGTGATCTGTGGTTGGTGGCGAAACCACGCTGCTGGAGGATCAGAGTCGCATTG
GCTTGGAGTTGTGGCCCGAGGTGTTACCATGGACAGCGTGGACAACTTGAGGGCACAGCT
AATCCATGATATTGGACAGCTCCTCAACGGCTCATCATCATCATAGAGTCATACTCTTAC
TTGTGTATGCTTGTGCTATTGTTGTGATTACACTTTGCCGCCTTCCAACCGGAAGGTTCT
CATATTCACCCTTTGCCGCCTTTGAACCGCCGACCAAGTGTTCCTTTCTCACAATTCAAT
GATCCGAAAGGTGATCACTCATGAAAAAATTGGTTCAAGTCTGGTCAGGCCACTGCAACT
TAATGGGAAAATGCCGCAAAACTGCAAGTTTTCAGGTAGGTGCTTGTAACTCAATCTCAG
AGTTGTCATGAGGCCACTGTAACCTTTTGTAATCAGGTCAACGTCGTTGTTTTCTATATC
GAAAGT

consensusID : consensus_1492#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1362
fasta sequence 
                              [AAATCCAATTTTGAGGACCACGACGCGAAATCCCAATTTTCCCCACCAGCCGCCGCCACCTCGGCCAATGCGCCGCCGCGCCGGTGCTGCTCTGCACGGCCACCGCGCGCGTGAACCGTTGCCTCGCCTCGATCGGTCTCGCCCGCTCCGCTTTCACGCCGCCACCCGCACCTTCGCTCGATGAGGGTTAGAGCCTCTCCACCTCCCTTCCCCCAATCCCAATCCGCTCTCGCGTCTCACTGCGCATCATGGCCGGATTGGCGGTGGCTGGCCGCTCGCTTGACGAGGCGTTCGAGGTGACCAGCGCGGTGGACAACATCGGCGCCTGGGGGTGGCTCGACGTGCAGGGATGTCGGCGGAGTTTGAAGCGGCTGGGCACCCGATCGAGCATGAGGCGAGCATGGCTGGACCGCGCCGTGGACTCGGAGGGCAAGGCTCACGCGCGCGACATCGTCCGGGAGATCATCTCCCGCGGCACGGATGATTGGATAGTGCGGCGGTGAACATGGAGTGGGGCGATGGCCCCGACGCCATCTCCGCCGCCACCGACGAGCTCGACCAAAGCGCGCTTGGGTGGCGGAGCGCGACCTGCCCCCCAACCCCCACCCACCTCACCTACATCGACGGGGCGGCGTCGCGTTCGTGGCCGCTCCACGCCAGGCAGCACACGGTGGTCGCCGCCGGCTACGACGTCCCCACGGGCGCGCTCGACCATGCGTCCTCTCGCCAGCCGCCACTCGGCGGCATGCGCCGCTATCACTTCAAGTTCAAGCTGCTATCGTTCGGGGTCAGAGCGGCGGATGTTCCACCTGTCGATGAAGATGGCGGCGCCTGGGGATGAACAAGCATCGACGGCGACGGCGGCGGCGGTGGTGGCGGCGGCGGCGGCGGCCGACGCGGTGGGGGACAGAGAGGGTGTGGGTGTGTGGATCGGCTGAGCGAGCCCAACATGCTCGTTTAGCCCGGCCCAGTTATCAAGAAGAGGGGCACCAGATGCGCCCAATCCCAAGACAACCATTTTTCCCAAGGAAAAAAAAAGGAAAGGAAAAAAAAAACAATCGTCTTCAAGCTTCGGGTTCCCGCTCAGCGCGGCAGCGGAACCAAGCCGAGGGAGCTCGACTCATCGACGATCACGGTGTCCAGTACTTTGGAAGAATCAGCCTATCCTGCCCGCACCCGCCATCTAGTTTCTGGAGGATACTATTCCGCCGAGGATAATTTGCTGACCTTGTTGCTGTTGGAGGAAGTATCTTAGTGTTGATAATGGGCAGGCGCAAAAAGAAAACACCAGCTCTCACACCGAGGGTATGATCGTCGATCACTTTTTTTCTATCTCCTGTAATTTACGGTCTGCTAACGAAT]

[+] EMBL AK109726             [AAATCCAATTTTGAGGACCACGACGCGAAATCCCAATTTTCCCCACCAGCCGCCGCCACCTCGGCCAATGCGCCGCCGCGCCGGTGCTGCTCTGCACGGCCACCGCGCGCGTGAACCGTTGCCTCGCCTCGATCGGTCTCGCCCGCTCCGCTTTCACGCCGCCACCCGCACCTTCGCTCGATGAGGGTTAGAGCCTCTCCACCTCCCTTCCCCCAATCCCAATCCGCTCTCGCGTCTCACTGCGCATCATGGCCGGATTGGCGGTGGCTGGCCGCTCGCTTGACGAGGCGTTCGAGGTGACCAGCGCGGTGGACAACATCGGCGCCTGGGGGTGGCTCGACGTGCAGGGATGTCGGCGGAGTTTGAAGCGGCTGGGCACCCGATCGAGCATGAGGCGAGCATGGCTGGACCGCGCCGTGGACTCGGAGGGCAAGGCTCACGCGCGCGACATCGTCCGGGAGATCATCTCCCGCGGCACGGATGATTGGATAGTGCGGCGGTGAACATGGAGTGGGGCGATGGCCCCGACGCCATCTCCGCCGCCACCGACGAGCTCGACCAAAGCGCGCTTGGGTGGCGGAGCGCGACCTGCCCCCCAACCCCCACCCACCTCACCTACATCGACGGGGCGGCGTCGCGTTCGTGGCCGCTCCACGCCAGGCAGCACACGGTGGTCGCCGCCGGCTACGACGTCCCCACGGGCGCGCTCGACCATGCGTCCTCTCGCCAGCCGCCACTCGGCGGCATGCGCCGCTATCACTTCAAGTTCAAGCTGCTATCGTTCGGGGTCAGAGCGGCGGATGTTCCACCTGTCGATGAAGATGGCGGCGCCTGGGGATGAACAAGCATCGACGGCGACGGCGGCGGCGGTGGTGGCGGCGGCGGCGGCGGCCGACGCGGTGGGGGACAGAGAGGGTGTGGGTGTGTGGATCGGCTGAGCGAGCCCAACATGCTCGTTTAGCCCGGCCCAGTTATCAAGAAGAGGGGCACCAGATGCGCCCAATCCCAAGACAACCATTTTTCCCAAGGAAAAAAAAAGGAAAGGAAAAAAAAAACAATCGTCTTCAAGCTTCGGGTTCCCGCTCAGCGCGGCAGCGGAACCAAGCCGAGGGAGCTCGACTCATCGACGATCACGGTGTCCAGTACTTTGGAAGAATCAGCCTATCCTGCCCGCACCCGCCATCTAGTTTCTGGAGGATACTATTCCGCCGAGGATAATTTGCTGACCTTGTTGCTGTTGGAGGAAGTATCTTAGTGTTGATAATGGGCAGGCGCAAAAAGAAAACACCAGCTCTCACACCGAGGGTATGATCGTCGATCACTTTTTTTCTATCTCCTGTAATTTACGGTCTGCTAACGAAT]




>consensus_1492#1
AAATCCAATTTTGAGGACCACGACGCGAAATCCCAATTTTCCCCACCAGCCGCCGCCACC
TCGGCCAATGCGCCGCCGCGCCGGTGCTGCTCTGCACGGCCACCGCGCGCGTGAACCGTT
GCCTCGCCTCGATCGGTCTCGCCCGCTCCGCTTTCACGCCGCCACCCGCACCTTCGCTCG
ATGAGGGTTAGAGCCTCTCCACCTCCCTTCCCCCAATCCCAATCCGCTCTCGCGTCTCAC
TGCGCATCATGGCCGGATTGGCGGTGGCTGGCCGCTCGCTTGACGAGGCGTTCGAGGTGA
CCAGCGCGGTGGACAACATCGGCGCCTGGGGGTGGCTCGACGTGCAGGGATGTCGGCGGA
GTTTGAAGCGGCTGGGCACCCGATCGAGCATGAGGCGAGCATGGCTGGACCGCGCCGTGG
ACTCGGAGGGCAAGGCTCACGCGCGCGACATCGTCCGGGAGATCATCTCCCGCGGCACGG
ATGATTGGATAGTGCGGCGGTGAACATGGAGTGGGGCGATGGCCCCGACGCCATCTCCGC
CGCCACCGACGAGCTCGACCAAAGCGCGCTTGGGTGGCGGAGCGCGACCTGCCCCCCAAC
CCCCACCCACCTCACCTACATCGACGGGGCGGCGTCGCGTTCGTGGCCGCTCCACGCCAG
GCAGCACACGGTGGTCGCCGCCGGCTACGACGTCCCCACGGGCGCGCTCGACCATGCGTC
CTCTCGCCAGCCGCCACTCGGCGGCATGCGCCGCTATCACTTCAAGTTCAAGCTGCTATC
GTTCGGGGTCAGAGCGGCGGATGTTCCACCTGTCGATGAAGATGGCGGCGCCTGGGGATG
AACAAGCATCGACGGCGACGGCGGCGGCGGTGGTGGCGGCGGCGGCGGCGGCCGACGCGG
TGGGGGACAGAGAGGGTGTGGGTGTGTGGATCGGCTGAGCGAGCCCAACATGCTCGTTTA
GCCCGGCCCAGTTATCAAGAAGAGGGGCACCAGATGCGCCCAATCCCAAGACAACCATTT
TTCCCAAGGAAAAAAAAAGGAAAGGAAAAAAAAAACAATCGTCTTCAAGCTTCGGGTTCC
CGCTCAGCGCGGCAGCGGAACCAAGCCGAGGGAGCTCGACTCATCGACGATCACGGTGTC
CAGTACTTTGGAAGAATCAGCCTATCCTGCCCGCACCCGCCATCTAGTTTCTGGAGGATA
CTATTCCGCCGAGGATAATTTGCTGACCTTGTTGCTGTTGGAGGAAGTATCTTAGTGTTG
ATAATGGGCAGGCGCAAAAAGAAAACACCAGCTCTCACACCGAGGGTATGATCGTCGATC
ACTTTTTTTCTATCTCCTGTAATTTACGGTCTGCTAACGAAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1492#0      TCCTCCTGTACAGTTGCATTCGGGTGAAATCCAATTTTGAGGACCACGACGCGAAATCCC 60
consensus_1492#1      --------------------------AAATCCAATTTTGAGGACCACGACGCGAAATCCC 34
                                                **********************************

consensus_1492#0      AATTTTCCCCACCAGCCGCCGCCGCCTCGGCCAATGCGCCGCCGCGCCGATGCTGCTCTG 120
consensus_1492#1      AATTTTCCCCACCAGCCGCCGCCACCTCGGCCAATGCGCCGCCGCGCCGGTGCTGCTCTG 94
                      *********************** ************************* **********

consensus_1492#0      CACGGCCACCGCGCGCGTGAACCGTTGCCTCGCCTCGATCGGTCTCGCCCGCTCCACTTT 180
consensus_1492#1      CACGGCCACCGCGCGCGTGAACCGTTGCCTCGCCTCGATCGGTCTCGCCCGCTCCGCTTT 154
                      ******************************************************* ****

consensus_1492#0      CACGCCGCCACCCGCACCTTCGCTCGATGAGGGTTAGAGCCTCTCCACCTCCCTTCCCCC 240
consensus_1492#1      CACGCCGCCACCCGCACCTTCGCTCGATGAGGGTTAGAGCCTCTCCACCTCCCTTCCCCC 214
                      ************************************************************

consensus_1492#0      AATCCCAATCCGCTCTCGCGTCTCACTGCGCATCATGGCCGGATTGGCGGTGGCTGGCCG 300
consensus_1492#1      AATCCCAATCCGCTCTCGCGTCTCACTGCGCATCATGGCCGGATTGGCGGTGGCTGGCCG 274
                      ************************************************************

consensus_1492#0      CTCGCTTGACGAGGCGTTCGAGGTGACCAGCGCGGTGGACAACATCGGCGCCTGGGGGTG 360
consensus_1492#1      CTCGCTTGACGAGGCGTTCGAGGTGACCAGCGCGGTGGACAACATCGGCGCCTGGGGGTG 334
                      ************************************************************

consensus_1492#0      GCTCGACGTGCAGGGATGTCGGCGGAGTTTGAAGCGGCTGGGCACCCGATCGAGCATGAG 420
consensus_1492#1      GCTCGACGTGCAGGGATGTCGGCGGAGTTTGAAGCGGCTGGGCACCCGATCGAGCATGAG 394
                      ************************************************************

consensus_1492#0      GCGAGCATGGCTGGACCGCGCCGTGGACTCGGAGGGCAAGTCTCACGCGCGCGACATCGT 480
consensus_1492#1      GCGAGCATGGCTGGACCGCGCCGTGGACTCGGAGGGCAAGGCTCACGCGCGCGACATCGT 454
                      **************************************** *******************

consensus_1492#0      CCGGGAGATCATCTCCCGCGGCACGGATGATTGGATAGCGCGGCGGTGAACATGGAGTGG 540
consensus_1492#1      CCGGGAGATCATCTCCCGCGGCACGGATGATTGGATAGTGCGGCGGTGAACATGGAGTGG 514
                      ************************************** *********************

consensus_1492#0      GGCGATGGCCCCGACGCCATCTCCGCCGCCACCGACGAGCTCGACCAAAGCGCGCTTGGG 600
consensus_1492#1      GGCGATGGCCCCGACGCCATCTCCGCCGCCACCGACGAGCTCGACCAAAGCGCGCTTGGG 574
                      ************************************************************

consensus_1492#0      TGGCGGAGCGCGACCTGCCCCCCAACCCCCACCCACCTCACCTACATCGACGGGGCGGCG 660
consensus_1492#1      TGGCGGAGCGCGACCTGCCCCCCAACCCCCACCCACCTCACCTACATCGACGGGGCGGCG 634
                      ************************************************************

consensus_1492#0      TCGCGTTCGTGGCCGCTCCACGCCAGGCAGCACACGGTGGTCGCCGCCGGCTACGACGTC 720
consensus_1492#1      TCGCGTTCGTGGCCGCTCCACGCCAGGCAGCACACGGTGGTCGCCGCCGGCTACGACGTC 694
                      ************************************************************

consensus_1492#0      CCCACGGGCGCGCTCGACCATGCGTCCTCTCGCCAGCCGCCACTCGGCGGCATGCGCCGC 780
consensus_1492#1      CCCACGGGCGCGCTCGACCATGCGTCCTCTCGCCAGCCGCCACTCGGCGGCATGCGCCGC 754
                      ************************************************************

consensus_1492#0      TATCACTTCAAGTTCAAGCTGCTATCGTTCGGGGTCAGAGCGGCGGATGTTCCACCTGTC 840
consensus_1492#1      TATCACTTCAAGTTCAAGCTGCTATCGTTCGGGGTCAGAGCGGCGGATGTTCCACCTGTC 814
                      ************************************************************

consensus_1492#0      GATGAAGATGGCGGCGCCTGGGGGTGAACAAGCATCGACGGCGACGGCGGCGGCGGTGGT 900
consensus_1492#1      GATGAAGATGGCGGCGCCTGGGGATGAACAAGCATCGACGGCGACGGCGGCGGCGGTGGT 874
                      *********************** ************************************

consensus_1492#0      GGCGGCGGCGGCGGCGGCCGACGCGGTGGGGGACAGAGAGGGTGTGGGTGTGTGGATCGG 960
consensus_1492#1      GGCGGCGGCGGCGGCGGCCGACGCGGTGGGGGACAGAGAGGGTGTGGGTGTGTGGATCGG 934
                      ************************************************************

consensus_1492#0      CTGAGCGAGCCCAACATGCTCGTTTAGCCCGGCCCAGTTATCAAGAAGAGGGGCACCAGA 1020
consensus_1492#1      CTGAGCGAGCCCAACATGCTCGTTTAGCCCGGCCCAGTTATCAAGAAGAGGGGCACCAGA 994
                      ************************************************************

consensus_1492#0      TGCGCCCAATCCCAAGACAACCATTTTTCCCAAGGAAAAAAAAAGGAAAGGAAAAAAAAA 1080
consensus_1492#1      TGCGCCCAATCCCAAGACAACCATTTTTCCCAAGGAAAAAAAAAGGAAAGGAAAAAAAAA 1054
                      ************************************************************

consensus_1492#0      ACAATCGTCTTCAAGCTTCGGGTTCCCGCTCAGCGCGGCAGCGGAACCAAGCCGAGGGAG 1140
consensus_1492#1      ACAATCGTCTTCAAGCTTCGGGTTCCCGCTCAGCGCGGCAGCGGAACCAAGCCGAGGGAG 1114
                      ************************************************************

consensus_1492#0      CTCGACTCATCGACGATCACGGTGTCCAGTACTTTGGAAGAATCAGCCTATCCTGCCCGC 1200
consensus_1492#1      CTCGACTCATCGACGATCACGGTGTCCAGTACTTTGGAAGAATCAGCCTATCCTGCCCGC 1174
                      ************************************************************

consensus_1492#0      ACCCGCCATCTAGTTTCTGGAGGATACTATTCCGCCGAGGATAATTTGCTGACCTTGTTG 1260
consensus_1492#1      ACCCGCCATCTAGTTTCTGGAGGATACTATTCCGCCGAGGATAATTTGCTGACCTTGTTG 1234
                      ************************************************************

consensus_1492#0      CTGTTGGAGGAAGTATCTTAGTGTTGATAATGGGCAGGCGCAAAAAGAAAACACCAGCTC 1320
consensus_1492#1      CTGTTGGAGGAAGTATCTTAGTGTTGATAATGGGCAGGCGCAAAAAGAAAACACCAGCTC 1294
                      ************************************************************

consensus_1492#0      TCACACCGAGG--AACACAGT--AACTCTATATCTTGATGGAACAGAACATG-AATTTGT 1375
consensus_1492#1      TCACACCGAGGGTATGATCGTCGATCACTTTTTTTCTATCTCCTGTAATTTACGGTCTGC 1354
                      ***********  *  *  **  * * ** * * *  **       **  *    * ** 

consensus_1492#0      TGAGAACTTCATACATTGCCAGGGGCACTACAGATTCTGGCTCCTGTGGAATTCTGCTTT 1435
consensus_1492#1      TAACGAAT---------------------------------------------------- 1362
                      * *  * *                                                    

consensus_1492#0      CAGGGTAACATATAGCCGAATGATGCTATATACAACACCAGTCCACGGGACATTCTATTA 1495
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      TGTCCTTAGGTATGAAGCAGAATACGTTGTACTAGTGATTGATGCTAGAACTGGCTGGCT 1555
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      TGTTGGGTTCTTCAACAACAGAGGCATTTATGAGATGCGGTCTGATGATAATCTTGGGAG 1615
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      TTATATGAATTCGTCACAATGTCATAAGCTTCCGTTCAATGGAAATCATAAGGAAATATC 1675
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      CCCACATGGGACAGAAAATACATGGCTGAATCTGCAACTGTTCAAAAAATGTTTTCGTTA 1735
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      TCTTTCCTCTTATCAGCCTAGCAACAGAAGAGTCCCAATTGGGTTCAAGATTTCATTGGG 1795
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      CATGATGGTCGTAATGTTTTTGGAATCAAAATTCAAAATGGTGCATAAAAAGGATATGCC 1855
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      ATGCCATGGAGCATGGTACGGGGTCACGGTTAGGTGATGGTTTTGAATGGGTCAAGAGGC 1915
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      TAATCGTCAATTGGAGTTCAATCAGCCAACAGGTTATGAGGTCTCTTAGCAATCAAAGAT 1975
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      ACAATCCCCACGATTGTGGCATAAGAGAATTGCTTACTTTTGATGATCTACACTCTTTTT 2035
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      GCTCTCAGGAGTTTATCACTGACCCAGTGAACAGGTTATCAGATAGAATTGACAGCGAAT 2095
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      ATGTCTTGCTTGTGAATCCTGCAATGCCACATCTGCTAGGAAACTCCTCAGATGCTACTG 2155
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      ATCTTGATTGTACCAATCAACTTGTGGAGAATCATCCTAAGCTGCCTGACCAAAATTTAT 2215
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      CAGCACAAGCTCAGATAGACGGTGATACAATTAATGAAGCACCACAAGCTCTTCCCACAA 2275
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      GTGTTGGTTCTCAGATTGGCGGCTGTTCAGTAGATGAAACACTGCAGGCTCTCCCCGCTA 2335
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      GCAGTTCTCTGATAAGCAGCAACACAGAAAATCTATCACCCCAGGCTCTCCCAACAAGCA 2395
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      GTGAATCAGCGGCAGGAGTGACGATAGATGACCTACGCTCTCTTTGCTCTCAGGAGTTTT 2455
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      TCACTGACCCAGTTGTGGTCCATGCTTTCAACAGGTTATCAGATAGAATTGACAGCGAAG 2515
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      ATGTGTTGCTTGTGAATCCTGCAATGTCACATCTACTAGGAAACTCAGATGCTACTGTTG 2575
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      TGTCAACCCAGCTACAGAGTCTAGGACTCCCCTCTCGAAAACTAGTCCTTTTTTCCAGTG 2635
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      AACAGTCAGGATCCCCATCTGTTGGGTGAAGGTACACACTGGAGCCTCCTAGTGTTTGAC 2695
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      CGCAACCTTGGAGGCAGACCATGCTTAGCCCACCATGACAGCAGTCCTGGTGATGCTAAT 2755
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      TTGAGAGCTGCACGCCGTCTTGCGGCATCACTGCTTCCTTACCTACCTCCTGAGACGAAA 2815
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      TGCACTAAAGCTCCGACACCTAAGCAAAACAATGGAACCGAATGTGCCCTTTACATGATT 2875
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      AAATGTGCTGAGGTGATCTGTGGTTGGTGGCGAAACCACGCTGCTGGAGGATCAGAGTCG 2935
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      CATTGGCTTGGAGTTGTGGCCCGAGGTGTTACCATGGACAGCGTGGACAACTTGAGGGCA 2995
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      CAGCTAATCCATGATATTGGACAGCTCCTCAACGGCTCATCATCATCATAGAGTCATACT 3055
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      CTTACTTGTGTATGCTTGTGCTATTGTTGTGATTACACTTTGCCGCCTTCCAACCGGAAG 3115
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      GTTCTCATATTCACCCTTTGCCGCCTTTGAACCGCCGACCAAGTGTTCCTTTCTCACAAT 3175
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      TCAATGATCCGAAAGGTGATCACTCATGAAAAAATTGGTTCAAGTCTGGTCAGGCCACTG 3235
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      CAACTTAATGGGAAAATGCCGCAAAACTGCAAGTTTTCAGGTAGGTGCTTGTAACTCAAT 3295
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      CTCAGAGTTGTCATGAGGCCACTGTAACCTTTTGTAATCAGGTCAACGTCGTTGTTTTCT 3355
consensus_1492#1      ------------------------------------------------------------
                                                                                  

consensus_1492#0      ATATCGAAAGT 3366
consensus_1492#1      -----------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)