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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15008#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1617 fasta sequence
[GCCTTCTGCAAACAGATGAACTACGTATATTTCACAACAGTGTACCTGAAGAGATAATTTCAACAGTCAGATTGGAAGAATCTGATGCATTCTATATGCTAGAACTTAGCACGAGCAGAGAATTTAGCTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCCTGTTACAAAGAGTACCAGCAGCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAGAAATTGCTTCCCTTCCAAAGCGGTTCAGTTGATGTTGTCACCTTTAGAGGCTCTAAGCTGCAAAGAATTAAAGAAATCTGGGTTGGTCTTGA-----GTCAG-----GCTCATGGAGAATAGATAATTTAAGCTTGAAAGTTATCCATGGACAGTTGAATACACCTCCAGATCTGGAGGAAACACCTGAACTCAAGTTCAATGGTCTGCAGTACACATTTGACAAACTCAGCATGCTGCTTGGAGAGGATGGAGCTTCAGTTGTGGAAGCAAGACCTGTGGCTGTCACTGATCTCACGGGAATAAGCCTTTCTGATCTCCAAGAGGGGCAATTATCCTCAGCAAGCACAGCTTCAAGCATCCTTGAAATGAAAGAGGATGGCTTGAAAGAGTATGCTGACCTCAAGCAGTCGCTGCTGCTCTACGATCTTGCTATTGTGATAACAGGTTTCTCTGCCTTCACCTTGGCTTCAAATGACAGTGCTGCCCTCTCGTTCCTTGTTGGAGGCATTGGAGGATTTCTCTATCTGTTGCTGCTCCAAAAATCTGTAGACGGGTTGCCGGCGCTTAATTCACCATCAGAAGCTGGCAGTGCCCAGCCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTTGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA-AATGCTCTTCTTGAATCGTAAGCA-TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG--ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTAGCAGTAATACTGCTGCTT-CTAGCAGAATATATTATATTATTGGTGTATATAAATCCGGTACTAATGATT-CAAATGTAATAATTACAATGTATGAATAGAAATCGCTTTGG]
[+] EMBL AK068341 [GCCTTCTGCAAACAGATGAACTACGTATATTTCACAACAGTGTACCTGAAGAGATAATTTCAACAGTCAGATTGGAAGAATCTGATGCATTCTATATGCTAGAACTTAGCACGAGCAGAGAATTTAGCTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCCTGTTACAAAGAGTACCAGCAGCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAGAAATTGCTTCCCTTCCAAAGCGGTTCAGTTGATGTTGTCACCTTTAGAGGCTCTAAGCTGCAAAGAATTAAAGAAATCTGGGTTGGTCTTGA GTCAG GCTCATGGAGAATAGATAATTTAAGCTTGAAAGTTATCCATGGACAGTTGAATACACCTCCAGATCTGGAGGAAACACCTGAACTCAAGTTCAATGGTCTGCAGTACACATTTGACAAACTCAGCATGCTGCTTGGAGAGGATGGAGCTTCAGTTGTGGAAGCAAGACCTGTGGCTGTCACTGATCTCACGGGAATAAGCCTTTCTGATCTCCAAGAGGGGCAATTATCCTCAGCAAGCACAGCTTCAAGCATCCTTGAAATGAAAGAGGATGGCTTGAAAGAGTATGCTGACCTCAAGCAGTCGCTGCTGCTCTACGATCTTGCTATTGTGATAACAGGTTTCTCTGCCTTCACCTTGGCTTCAAATGACAGTGCTGCCCTCTCGTTCCTTGTTGGAGGCATTGGAGGATTTCTCTATCTGTTGCTGCTCCAAAAATCTGTAGACGGGTTGCCGGCGCTTAATTCACCATCAGAAGCTGGCAGTGCCCAGCCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTTGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGTCATAGGCTTATAGCAGAACAATATATTCTTCAGTGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTAGCAGTAATACCGCTGCTT CTAGCAGAATATATTATATTATTGGTGTATATAAATCCGGTACTAATGATT CAAATGTAATAATTACA ]
[+] EMBL CB663205 [GCCTTCTGCAAACAGATGAACTACGTATATTTCACAACAGTGTACCTGAAGAGATAATTTCAACAGTCAGATTGGAAGAATCTGATGCATTCTATATGCTAGAACTTAGCACGAGCAGAGAATTTAGCTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCCTGTTACAAAGAGTACCAGCAGCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAGAAATTGCTTCCCTTCCAAAGCGGTTCAGTTGATGTTGTCACCTTTAGAGGCTCTAAGCTGCAAAGAATTAAAGAAATCTGGGTTGGTCTTGA GTCAGGTCACGCTCATGGAGAATAGATAATTTAAGCTTGA ]
[+] EMBL CB641464 [GCCTTCTGCAAACAGATGAACTACGTATATTTCACAACAGTGTACCTGAAGAGATAATTTCAACAGTCAGATTGGAAGAATCTGATGCATTCTATATGCTAGAACTTAGCACGAGCAGAGAATTTAGCTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCCTGTTACAAAGAGTACCAGCAGCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAGAAATTGCTTCCCTTCCAAAGCGGTTCAGTTGATGTTGTCACCTTTAGAGGCTCTAAGCTGCAAAGAATTAAAGAAATCTGGGTTGGTCTTGA GTCAG GCTCATGGAGAATAGATAATTTAAGCTTGAAAGTTATCCATGGACAGTTGAATACACCTCCAGATCTGGAGG ]
[+] EMBL CB626904 [GCCTTCTGCAAACAGATGAACTACGTATATTTCACAACAGTGTACCTGAAGAGATAATTTCAACAGTCAGATTGGAAGAATCTGATGCATTCTATATGCTAGAACTTAGCACGAGCAGAGAATTTAGCTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCCTGTTACAAAGAGTACCAGCAGCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAGAAATTGCTTCCCTTCCAAAGCGGTTCAGTTGATGTTGTCACCTTTAGAGGCTCTAAGCTGCAAAGAATTAAAGAAATCTGGGTTGGTCTTGAGTCAGGTCAG GCTCATGGAGAATAGATAATTTAAGCTTGAAAGTTATCCATGGACAGTTGAATACACCTCCAGATCTGGAGGAAACACCTGAACTCAAGTTCAATGGTCTGCAGTACACATTTGACAAACTCAGCATGCTGCTTGGAGAGGATGGAGCTTCAGTTGTGGAAGCAAGACCTGTGGCTGTCACTGATCTCACGGGAATAAGCCTTTCTGATCTCCAAGAGGGGCAATTATCCTCAGCAAGCACAGCTTCAAGCATCCTTGAAATGAAAGAGGATGGCTTGANAGAGTATGCTGACCTCAAGCAGTCGCTGCTGCTCTACGATCTTGCTATTGTGATAACAGGT ]
[+] EMBL CF304171 [GCCTTCTGCAAACAGATGAACTACGTATATTTCACAACAGTGTACCTGAAGAGATAATTTCAACAGTCAGATTGGAAGAATCTGATGCATTCTATATGCTAGAACTTAGCACGAGCAGAGAATTTAGCTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCCTGTTACAAAGAGTACCAGCAGCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAGAAATTGCTTCCCTTCCAAAGCGGTTCAGTTGATGT ]
[+] EMBL CB633749 [ TCAAGCA CCTCTGATGCTCTACGATCTTGCTATTGTGATAACAGGTTTCTCTGCCTTCACCTTGGCTTCAAATGACAGTGCTGCCCTCTCGTTCCTTGTTGGAGGCATTGGAGGATTTCTCTATCTGTTGCTGCTCCAAAAATCTGTAGACGGGTTGCCGGCGCTTAATTCACCATCAGAAGCTGGCAGTGCCCAACCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTTGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTGAAATTTCACATCACAGGCATGGAAATTGGCAAGGTGGCCTA ]
[+] EMBL CB619959 [ GCTCTACGATCTTGCTATTGTGATAACAGGTTTCTCTGCCTTCACCTTGGCTTCAAATGACAGTGCTGCCCTCTCGTTCCTTGTTGGAGGCATTGGAGGATTTCTCTATCTGTTGCTGCTCCAAAAATCTGTAGACGGGTTGCCGGCGCTTAATTCACCATCAGAAGCTGGCAGTGCCCAGCCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTCGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTCTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTAT ]
[-] EMBL CB633750 [ TTCTCTATCTGTTGCTGCTCCAAAAATCTGTAGACGGGTTGCCGGCGCTTAATTCACCATCAGAAGCTGGCAGTGCCCAACCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTTGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTGAAATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGGGGCAGTAATACTGCTGCTT CTAGCAGAAAAAA AAATTAaaaga ]
[-] EMBL CB626905 [ GCCGGCGCTTAATTCACCATCAGAAGCTGGCAGTGCCCAACCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTTGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTGAAATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTAGCAGTAATACTGCTGCTT CTAGCAGAATATATTATATTATTGGTGTATATAAATCCGGTACTAATGATT CAAATGTAATAATTACAATGTATGAATAGAAATCGCTTTGG]
[-] EMBL CB619960 [ GCAGTGCCCAGCCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTCGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTCTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTAGCAGTAATACTTCTGCTT CTAGCAGAATATATTATATTATTGGCGTATATAAATCCGGTACTAATGATTCCAAAAG GGTAATTACAATGTATGAATA ]
[-] EMBL CB641465 [ AGCCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTTGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAGTGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTAGCAGTAATACTGCTGCTTGGTAGCAGAATATATTATATTATTGGTGTATATCAAaaaaagga ]
[-] EMBL CB631744 [ CAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTTGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTGAAATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTAGCAGTAATACTGCTGCTT CTAGC ]
[-] EMBL CB663206 [ GGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAGACTTGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTTCCATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGGTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCATAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGTTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATGTGAAGTATACCGAAACTTCCCTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGTCATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTATTCAGTGTATGTAAATTTGGTATAGTAATGGTTACAATTTTAATGATTATGTAGCAGTAATTCTGCTGCTT GTAGCAGAATATATTATATTATTGGTGTATA ]
[-] EMBL CA762074 [ AGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCNGGAGCTGTGCCATTGAAATATGGAGCGGGTGGTGACAAACTCGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTCTTCTCGCGGCATTCAAACCCTTGCAGAGTAATNTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTAGCAGTAATACTTCTGCTT CTAGCAGAATATATTATATTATTGGCGTAAAAAAAa ]
[+] EMBL CA764063 [ GCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTACCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTAGCAGTAATACTTCTGCTT CTAGCAGAATATATTATATTATTGGCGTATATAAATCCGGTACTAATGATT CAAATGTAATAATTACAATGTATGAATAGAAA ]
[+] EMBL BQ907792 [ TATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCCAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAAC ATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTA CAGTAATACTTCTGCTT CTA CAGAATATATTAaaaaaaaaa ]
[+] EMBL BM420300 [ TTAATTATCGAAGTCCCTAGTTCAAGTTTCCAGAGGGAACTTGACCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACANAATGCTCTTCTTGAATCGTAA CACTTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACCATTTTAATGATTATGTAGCAGTAATACTTCTGCTT CTAGCAGAATATATTATATTATTGGCGTATATAAATCCGGTACTAATGATT CAAAaaaaaaa ]
consensusID : consensus_15008#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 479 fasta sequence
[CGGATCCACAAAAATGCCTTCCTTTCCTTGGGATATTCGTAAACCACTTTTTCCTTTTTAAAAGGGTTTCCAAACCTTCCGGAATTATTGAAAATTTTTCCAATTCCGGAAAGTAATCCCGAACCTTTCACCTGGAGTTCCACCAATTCCACCAGCCATTGGAAGAATTTGGCCAACTTTTGGCCCCTAATAATCCACCACTTCCCAAGAACCAACTTTGGACCAAGAATTCCCAATGATAATCTAGTAACATAGTATAGATGTATAGTCACATGATAGTCCATAGGCTTATACAGAACCATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTACAGTAATACTTCTGCTTCTACCAGAATATATTATATTATTGGCGTATATAAATCCGGTACTAATGATTCAAATGTAATAATTACCATGTATGAATAGAAATCGCTTTGGTAAAAAAAA]
[+] EMBL BM421508 [CGGATCCACAAAAATGCCTTCCTTTCCTTGGGATATTCGTAAACCACTTTTTCCTTTTTAAAAGGGTTTCCAAACCTTCCGGAATTATTGAAAATTTTTCCAATTCCGGAAAGTAATCCCGAACCTTTCACCTGGAGTTCCACCAATTCCACCAGCCATTGGAAGAATTTGGCCAACTTTTGGCCCCTAATAATCCACCACTTCCCAAGAACCAACTTTGGACCAAGAATTCCCAATGATAATCTAGTAACATAGTATAGATGTATAGTCACATGATAGTCCATAGGCTTATACAGAACCATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTACAGTAATACTTCTGCTTCTACCAGAATATATTATATTATTGGCGTATATAAATCCGGTACTAATGATTCAAATGTAATAATTACCATGTATGAATAGAAATCGCTTTGGTAAAAAAAA]
consensusID : consensus_15008#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 404 fasta sequence
[CATTCTATATGCTAGNACTTAGCACGANNNGAGAATTTNNNTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCCTGTTACAAAGAGTACCAGCATCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAAAAATTGCTTCCCTTCCAAAGCGNNTCAGTTGATGTTGTCACCTTTNNNNGCTCTAAGCTGCANNNNATTACANAAATCTGGGTTGGTCTTGAGTCAGGCTCATGGAGAATNNNTAATTTAAGCTTGAAAGTTATCCATGGACAGTTGAATACACCTCCNNNTCTGGANNAAACACCTGAACTCAAGTTCANTGGTCTGCNNTACACATTTGACAAACTNNNNATGCTGCTTGGNNNNNAT]
[+] EMBL CF197063 [CATTCTATATGCTAGNACTTAGCACGANNNGAGAATTTNNNTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCCTGTTACAAAGAGTACCAGCATCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAAAAATTGCTTCCCTTCCAAAGCGNNTCAGTTGATGTTGTCACCTTTNNNNGCTCTAAGCTGCANNNNATTACANAAATCTGGGTTGGTCTTGAGTCAGGCTCATGGAGAATNNNTAATTTAAGCTTGAAAGTTATCCATGGACAGTTGAATACACCTCCNNNTCTGGANNAAACACCTGAACTCAAGTTCANTGGTCTGCNNTACACATTTGACAAACTNNNNATGCTGCTTGGNNNNNAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15008#0 GCCTTCTGCAAACAGATGAACTACGTATATTTCACAACAGTGTACCTGAAGAGATAATTT 60
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 --------------------------------------CGGATCCACAAAAATGCCTTCC 22
consensus_15008#0 CAACAGTCAGATTGGAAGAATCTGATGCATTCTATATGCTAGAACTTAGCACGAGCAGAG 120
consensus_15008#2 ---------------------------CATTCTATATGCTAGNACTTAGCACGANNNGAG 33
consensus_15008#1 TTTCCTTGGGATATTCGTAAACCACTTTTTCCTTTTTAAAAGGGTTTCCAAACCTTCCGG 82
* ** * * ** ** * *
consensus_15008#0 AATTTAGCTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCA 180
consensus_15008#2 AATTTNNNTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCA 93
consensus_15008#1 AATTATTGAAAATTTTTCCAATTCCGGAAAGTAATCCCGAACCTTTCACCTGGAGTTCCA 142
**** *** * * * * * * * * * * * ***
consensus_15008#0 ATGGTGATTCC--CTGTTACAAAGAGT--ACCAGCAG----CCTATTGTAATCATTC--T 230
consensus_15008#2 ATGGTGATTCC--CTGTTACAAAGAGT--ACCAGCAT----CCTATTGTAATCATTC--T 143
consensus_15008#1 CCAATTCCACCAGCCATTGGAAGAATTTGGCCAACTTTTGGCCCCTAATAATCCACCACT 202
* ** * ** ** * * *** * ** * ***** * *
consensus_15008#0 GCACAAGGCAGAGAGGCCGAGAAATTGCTTCCCTTCCAAAGCGGTTCAGTTGATGTTGTC 290
consensus_15008#2 GCACAAGGCAGAGAGGCCGAAAAATTGCTTCCCTTCCAAAGCGNNTCAGTTGATGTTGTC 203
consensus_15008#1 TCCCAAGAACCAACTTTGGACCAAGAATTCCCAATGATAATCTAGTAACATAGTATAGAT 262
* **** * ** ** * ** * ** * * * * * * *
consensus_15008#0 ACCTTTAGAGGCTCTAAGCTGCAAAGAATTAAAGAAATCTGGGTTGGTCT-TGAGTCAGG 349
consensus_15008#2 ACCTTTNNNNGCTCTAAGCTGCANNNNATTACANAAATCTGGGTTGGTCT-TGAGTCAGG 262
consensus_15008#1 GTATAGTCACATGATAGTCCATAGGCTTATACAGAACCATATATTCTTCAATGTATGTAA 322
* ** * * ** * ** * ** ** ** *
consensus_15008#0 CTCATGGAGAATAGATAATTTAAGCTTGAAAGTTATCCATGGACAGTTGAATACACCTCC 409
consensus_15008#2 CTCATGGAGAATNNNTAATTTAAGCTTGAAAGTTATCCATGGACAGTTGAATACACCTCC 322
consensus_15008#1 ATCTGGTATACTAATGGTTACAATTTTAATGATTATGTACAGTAATACTTCTGCTTCTAC 382
** * * * * * ** ** * **** * * * * * ** *
consensus_15008#0 AGATCTGGAGGAAACACCTGA---ACTCAAGTTCAATGGTCTGCAGTACACATTTGACAA 466
consensus_15008#2 NNNTCTGGANNAAACACCTGA---ACTCAAGTTCANTGGTCTGCNNTACACATTTGACAA 379
consensus_15008#1 CAGAATATATTATATTATTGGCGTATATAAATCCGGTACTA-ATGATTCAAATGTAATAA 441
* * * * ** * ** * * * * * ** ** * * **
consensus_15008#0 ACTCAGCATGCTGCTTGGAGAGGATGGAGCTTCAGTTGTGGAAGCAAGACCTGTGGCTGT 526
consensus_15008#2 ACTNNNNATGCTGCTTGGNNNNNAT----------------------------------- 404
consensus_15008#1 TTACCATGTATGAATAGAAATCGCTTTGGTAAAAAAAA---------------------- 479
* * * *
consensus_15008#0 CACTGATCTCACGGGAATAAGCCTTTCTGATCTCCAAGAGGGGCAATTATCCTCAGCAAG 586
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 CACAGCTTCAAGCATCCTTGAAATGAAAGAGGATGGCTTGAAAGAGTATGCTGACCTCAA 646
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 GCAGTCGCTGCTGCTCTACGATCTTGCTATTGTGATAACAGGTTTCTCTGCCTTCACCTT 706
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 GGCTTCAAATGACAGTGCTGCCCTCTCGTTCCTTGTTGGAGGCATTGGAGGATTTCTCTA 766
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 TCTGTTGCTGCTCCAAAAATCTGTAGACGGGTTGCCGGCGCTTAATTCACCATCAGAAGC 826
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 TGGCAGTGCCCAGCCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATT 886
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 GTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACT 946
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 TGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGC 1006
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 CATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGG 1066
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 AGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTA 1126
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 TCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGC 1186
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 CTTATCTCTAGCTCACAAGCACAGCTGCCGATCACAAATGCTCTTCTTGAATCGTAAGCA 1246
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACT 1306
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 GATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTT 1366
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 GAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGC 1426
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 CATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGT 1486
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 TACAATTTTAATGATTATGTAGCAGTAATACTGCTGCTTCTAGCAGAATATATTATATTA 1546
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 TTGGTGTATATAAATCCGGTACTAATGATTCAAATGTAATAATTACAATGTATGAATAGA 1606
consensus_15008#2 ------------------------------------------------------------
consensus_15008#1 ------------------------------------------------------------
consensus_15008#0 AATCGCTTTGG 1617
consensus_15008#2 -----------
consensus_15008#1 -----------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||