These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15022#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 2411 fasta sequence [TCTTCTCTTTCCGATCCGATCTGCGGTGCGTCTCGCGCGCGGCCGCCGACGAGCCCCCGCGGCCCCGCCTCCTCCTCGCCGCGGCCGCCCGAGCCTCTCCCCGGCCCCTCGCGCGCACGGCCGGCCGGCGAGCAGGCTCGGAGAGAGAGGCGACGACCTCCCACTTCGAATCGAATCGAAGATTGGGAATCCGTTCGGTTTGTTAGCTTGGGGGATTTGGATAATTGGATTGGGTTGTTGTTCTCGTTTTGAGGTTGATGCGGCGGTGG-GGATATACGTTGAATCGGAGGCAACCTGTTTGATGAAATGTCACTGAAGCTCCCGATCCCGCAAGGGCTCTCCTTCCTGAGAAGCGTCGGGTGGTTCGAGGAGAGGAAGGCCGATGCCGCGGCGGCCAGGCAGCGGCACTCCCCGAGATTGAAGCTCCAGACGGACAGGGAGGTGTACAGACCCGGTGATTCGGTCACCGCGACTATAGAGATCTGCACCCCAGCTGGGTTGAAGGATGACGCGGCGTCGGCGGAGACCGGTGAGGATGCCCCCTCGCTCTTGGTGGATGGGCTCTCGTTCGAGATCAAAGGGATTGAGAAGTTGGATAGCCAGTGGTTCTCTGTTTCAAAGCCCTTACCAGGGTCTAAGCAAAGGAGAGGTGAACATTTGTTTCTGGATTGTTCGGCACCCTCGCTAATCCCTAAAGTTATAATTGCTTCGGGGCAAACAAAAACATACATTGTACGTGTGGAGCTCCCGAAGATTTTACCACCATCATATAGGGGTATAAGTGTCCGCTATATTTATTATGTTAAAAGTATATTGTTTGGAAGATCGATTGTATTGGGTAATGGAGATCAAAATATTGCCCCTGTAAATACCGCAGTTCAATTGGAAGCTCGAGTCCCATTGCAGATATGTGTTTCACAGAAAAGTAGCAACCTACTAAATGAAGAAGTGAACTTTCCACTCCCAATTGAGCAACCGGATATATTTTGGAGGGAAAAGGACGAAGATTCAGAATGGAGCAAAGCAAATGATAATACTGATTTAGAAGAAGGATATGATAGTTCAAAGGATGAAGTTTCATCTGTTTCCTCCTACAACAAAGCAAATCCAGAAAGCTCCCTCAGGAGCTCAGTGTCGATGCACTCCCTGTCATCACGTCTTTCCACTAGTGAACCATTGTATTCTAGAGAACGCCCCAGTTTCCCATCTTATAGTCCAATTCCTCGACTATCAGTATCAGAGATTTCAGATGATCATGGTGGA-GGT-G--TGGTGTCACCTCAAAGGAAGCTAAATCATTTGCTGTCAGATCATCATCCATCAAATGGACAGATGTTTTCTCTAGATCCTGACCGCTCAAATGATGATGCTGGACCACCTCTCACACCAAAATATGTTGAACCAGCTGGATCAGAAGGCTTTATGAGAGGAAGATCGTACAACATAAGAATAGATGACCAAGTGTTGCTTCGCTTCTCACCAAAGAATTCTGACTCAACTTATTACTTTGGTGATATG-A-TTGGTGGAGCACTCACCTTCTTTCATGGATCTGGAACACGAAGATGCCTAGAGGTATCTGTTACCTTGGAAACATCAGAAACGGTTAATCCTCGTGTAATACATCCTTCGAGAAGGAGCTCACCCTCAATAACCAAGGTACACAGTGAGCACTATGAAGTTGTTGCGGATCTTCACCAGACAAGCTTTCTCTTTTCAGTTCCAATTGATGGACCAATGTCATTTTCCACTTCAAAAGTTTCTGTGCAATGGTCTCTTCGATTTGAGTTCTTCACAACTCCCGAAGGAATTGATTCATCTAGGTATGAACATCCACTTCTCGTCGAGAAAAGAGAGAAGGGTGACTGGGTGCTTCCAATAACTGTTTATGCACCTCCATTGCGTAGGCAAGCAATTCATGGAAGAAATGATAGATCTGTCTTAGTTGGGAACCTTTTCAACTCTTGAAGATGTGCATACAAGGTTCTGCTGTTCTTTTCAAAACCCCTACCAGTTTTGCTTCCGATGAGCTTCGACAAGTATTCTCTGTAGTTCACTTTGCACAGCTGGCCAGTTCC-ATACCTCTAAAATACATGGGAGATCCGGAACACAT-AAAGCGAGAACAAACTTGTGTTAGATCAAGTGTGCAAATCACAGAGTTC-GTCACCTGAGAACAGGCAGCTGTGCCTTGATGTAACATCGGC-ACTGCTTGATTACCT-TGATGTACTATAGGCATTCCTTTGATAG-AGGGACAAAACTTTTGGGGTGCTTGATTAGCTGTTATACCCCT-TTTCATTCGGTATGTGTATACGTGAGACATCTGCCTTGTAATTCAATTCTTTTGTGGAAACCAAACATATAGCAGTACGCTGGTTGTCCAGAATCCAGATTACACACGTCCTGTTTCTGAGACTATT] [+] EMBL CB627744 [TCTTCTCTTTCCGATCCGATCTGCGGTGCGTCTCGCGCGCGGCCGCCGACGAGCCCCCGCGGCCCCGCCTCCTCCTCGCCGCGGCCGCCCGAGCCTCTCCCCGGCCCCTCGCGCGCACGGCCGGCCGGCGAGCAGGCTCGGAGAGAGAGGCGACGACCTCCCACTTCGAATCGAATCGAAGATTGGGAATCCGTTCGGTTTGTTAGCTTGGGGGATTTGGATAATTGGATTGGGTTGTTGTTCTCGTTTTGAGGTTGATGCGGCGGTGG GGATATACGTTGAATCGGAGGCAACCTGTTTGATGAAATGTCACTGAAGCTCCCGATCCCGCAAGGGCTCTCCTTCCTGAGAAGCGTCGGGTGGTTCGAGGAGAGGAAGGCCGATGCCGCGGCGGCCAGGCAGCGGCACTCCCCGAGATTGAAGCTCCAGACGGACAGGGAGGTGTACAGACCCGGTGATTCGGTCACCGCGACTATAGAGATCTGCACCCCAGCTGGGTTGAAGGATGACGCGGCGTCGGCGGAGACCGGTGAGGATGCCCCCTCGCTCTTGGTGGATGGGCTCTCGTTCGAGATCAAAGGGATTGAGAAGTTGGATAGCCAGTGGTTCTCTGTTTCAAAGCCCTTACCAGGGTCTAAGCAAAGGAGAGGTGAACATTTGTTTCTGGATTGTTCGGCACCCTCGCTAATCCCTAAAGTTATAA ] [+] EMBL CB633743 [ GGTGCGTCTCGCGCGCGGCCGCCGACGAGCCCCCGCGGCCCCGCCTCCTCCTCGCCGCGGCCGCCCGAGCCTCTCCCCGGCCCCTCGCGCGCACGGCCGGCCGGCGAGCAGGCTCGGAGAGAGAGGCGACGACCTCCCACTTCGAATCGAATCGAAGATTGGGAATCCGTTCGGTTTGTTAGCTTGGGGGATTTGGATAATTGGATTGGGTTGTTGTTCTCGTTTTGAGGTTGATGCGGCGGTGG GGATATACGTTGAATCGGAGGCAACCTGTTTGATGAAATGTCACTGAAGCTCCCGATCCCGCAAGGGCTCTCCTTCCTGAGAAGCGTCGGGTGGTTCGAGGAGAGGAAGGCCGATGCCGCGGCGGCCAGGCAGCGGCACTCCCCGAGATTGAAGCTCCAGACGGACAGGGAGGTGTACAGACCCGGTGATTCGGTCACCGCGACTATAGAGATCTGCACCCCAGCTGGGTTGAAGGATGACGCGGCGTCGGCGGAGACCGGTGAGGATGCCCCCTCGCTCTTGGTGGATGGGCTCTCGTTCGAGATCAAAGGGATTGAGAAGTTGGATAGCCAGTGGTTCTCTGTTTCAAAGCCCTTACCAGGGTCTAAGCAAAGGAGAGGTGAACATTTGTTTCTGGATTGTTCGGCACCCTCGCTAATCCCTAAAGTTATAATTGCTTCGGGGCAAACAAAAACATACATTATACGTGTGGAGCTCCCGAAGATTTTACCACCATCATATAGGGGTATAAGTGTCCGCTATATTTA ] [+] EMBL CB673220 [ CGCGCGGCCGCCGACGAGCCCCCGCGGCCCCGCCTCCTCCTCGCCGCGGCCGCCCGAGCCTCTCCCCGGCCCCTCGCGCGCACGGCCGGCCGGCGAGCAGGCTCGGAGAGAGAGGCGACGACCTCCCACTTCGAATCGAATCGAAGATTGGGAATCCGTTCGGTTTGTTAGCTTGGGGGATTTGGATAATTGGATTGGGTTGTTGTTCTCGTTTTGAGGTTGATGCGGCGGTGGAGGATATACGTTGAATCGGAGGCAACCTGTTTGATGAAATGTCACTGAAGCTCCCGATCCCGCAAGGGCTCTCCTTCCTGAGAAGCGTCGGGTGGTTCGAGGAGAGGAAGGCCGATGCCGCGGCGGCCAGGCAGCGGCACTCCCCGAGATTGAAGCTCCAGACGGACAGGGAGGTGTACAGACCCGGTGATTCGGTCACCGCGACTATAGAGATCTGCACCCCAGCTGGGTTGAAGGATGACGCGGCGTCGGCGGAGACCGGTGAGGATGCCCCCTCGCTCTTGGTGGATGGGCTCTCGTTCGAGATCAAAGGGATTGAGAAGTTGGATAGCCAGTGGTTCTCTGTTTCAAAGCCCTTACCAGGGTCTAAGCAAAGGAGAGGTGAACATTTGTTTCTGGATTGTTCGGCACCCTCGCTAATCCCTAAAGTTATAATTGCTTCGGGGCAAACAAAAACATACATTGTACGTGTGGAGCTCCCGAAGATTTTACCACCATCAT ] [-] EMBL CB673221 [ CCGGCGAGCAGGCTCGGAGAGAGAGGCGACGACCTCCCACTTCGAATCGAATCGAAGATTGGGAATCCGTTCGGTTTGTTAGCTTGGGGGATTTGGATAATTGGATTGGGTTGTTGTTCTCGTTTTGAGGTTGATGCGGCGGTGG GGATATACGTTGAATCGGAGGCAACCTGTTTGATGAAATGTCACTGAAGCTCCCGATCCCGCAAGGGCTCTCCTTCCTGAGAAGCGTCGGGTGGTTCGAGGAGAGGAAGGCCGATGCCGCGGCGGCCAGGCAGCGGCACTCCCCGAGATTGAAGCTCCAGACGGACAGGGAGGTGTACAGACCCGGTGATTCGGTCACCGCGACTATAGAGATCTGCACCCCAGCTGGGTTGAAGGATGACGCGGCGTCGGCGGAGACCGGTGAGGATGCCCCCTCGCTCTTGGTGGATGGGCTCTCGTTCGAGATCAAAGGGATTGAGAAGTTGGATAGCCAGTGGTTCTCTGTTTCAAAGCCCTTACCAGGGTCTAAGCAAAGGAGAGGTGAACATTTGTTTCTGGATTGTTCGGCACCCTCGCTAATCCCTAAAGTTATAATTGCTTCGGGGCAAACAAAAACATACATTGTACGTGTGGAGCTCCCGAAGATTTTACCACCATCATATAGGGGTATAAGTGTCCGCTATATTTATTATGTTAAAAGTATATTGTTTGGAAGATCGATTGTAAGGGGTAATGGAGATCAAAATATTGCCCCTGTAAATAtaacgg ] [+] EMBL CF304372 [ CGGTCACCGCGACTATAGAGATCTGCACCCCAGCTGGGTTGAAGGATGACGCGGCGTCGGCGGAGACCGGTGAGGATGCCCCCTCGCTCTTGGTGGATGGGCTCTCGTTCGAGATCAAAGGGATTGAGAAGTTGGATAGTCAGTGGTTCTCTGTTTCAAAGCCCTTACCAGGGTCTAAGCAAAGGAGAGGTGAACATTTGTTTCTGGATTGTTCGGCACCCTCGCTAATCCCTAAAGTTATAATTGCTTCGGGGCAAACAAAAACATACATTGTACGTGTGGAGCTCCCGAAGATTTTACCACCATCATATAGGGGTATAAGTGTCCGCTATATTTATTATGTTAAAAGTATATTGTTTGGAAGATCGATTGTATTGGGTAATGGAGATCAAAATATTGCCCCTGTAAATACCGCAGTTCAATTGGAAGCTCGAGTCCCATTGCAGATATGTGTTTCACAGAAAAGTAGCAACCTACTAAATGAAGAAGTGAACTTTCCACTCCCAATTGAGCAACCGGATATATTTTGGAGGGAAAAGG ] [+] EMBL CF304459 [ CGGTCACCGCGACTATAGAGATCTGCACCCCAGCTGGGTTGAAGGATGACGCGGCGTCGGCGGAGACCGGTGAGGATGCCCCCTCGCTCTTGGTGGATGGGCTCTCGTTCGAGATCAAAGGGATTGAGAAGTTGGATAGCCAGTGGTTCTCTGTTTCAAAGCCCTTACCAGGGTCTAAGCAAAGGAGAGGTGAACATTTGTTTCTGGATTGTTCGGCACCCTCGCTAATCCCTAAAGTTATAATTGCTTCGGGGCAAACAAAAACATACATTGTACGTGTGGAGCTCCCGAAGATTTTACCACCATCATATAGGGGTATAAGTGTCCGCTATATTTATTATGTTAAAAGTATATTGTTTGGAAGATCGATTGTATTGGGTAATGGAGATCAAAATATTGCCCCTGTAAATACCGCAGTTCAATTGGAAGCTCGAGTCCCATTGCAGATATGTGTTTCACAGAAAAGTAGCAACCTACTAAATGAAGAAGTGAACTTTCCACTCCCAATTGAGCAACCGGATATATTTTGGAGGGAAAAGGACGAAGATTCAGAATGGAGCAAAGCAAATGATA ] [+] EMBL CF323108 [ TTGTTTGGAAGATCGATTGTATTGGGTAATGGAGATCAAAATATTGCCCCTGTAAATACCGCAGTTCAATTGGAAGCTCGAGTCCCATTGCAGATATGTGTTTCACAGAAAAGTAGCAACCTACTAAATGAAGAAGTGAACTTTCCACTCCCAATTGAGCA ] [+] EMBL AK060212 [ TATTGGGTAATGGAGATCAAAATATTGCCCCTGTAAATACCGCAGTTCAATTGGAAGCTCGAGTCCCATTGCAGATATGTGTTTCACAGAAAAGTAGCAACCTACTAAATGAAGAAGTGAACTTTCCACTCCCAATTGAGCAACCGGATATATTTTGGAGGGAAAAGGACGAAGATTCAGAATGGAGCAAAGCAAATGATAATACTGATTTAGAAGAAGGATATGATAGTTCAAAGGATGAAGTTTCATCTGTTTCCTCCTACAACAAAGCAAATCCAGAAAGCTCCCTCAGGAGCTCAGTGTCGATGCACTCCCTGTCATCACGTCTTTCCACTAGTGAACCATTGTATTCTAGAGAACGCCCCAGTTTCCCATCTTATAGTCCAATTCCTCGACTATCAGTATCAGAGATTTCAGATGATCATGGTGGA GGT G TGGTGTCACCTCAAAGGAAGCTAAATCATTTGCTGTCAGATCATCATCCATCAAATGGACAGATGTTCTCTCTAGATCCTGACCGCTCAAATGATGATGCTGGACCACCTCTCACACCAAAATATGTTGAACCAGCTGGATCAGAAGGCTTTATGAGAGGAAGATCGTACAACATAAGAATAGATGACCAAGTGTTGCTTCGCTTCTCACCAAAGAATTCTGACTCAACTTATTACTTTGGTGATATG A TTGGTGGAGCACTCACCTTCTTTCATGGATCTGGAACACGAAGATGCCTAGAGGTATCTGTTACCTTGGAAACATCAGAAACGGTTAATCCTCGTGTAATACATCCTTCGAGAAGGAGCTCACCCTCAATAACCAAGGTACACAGTGAGCACTATGAAGTTGTTGCGGATCTTCACCAGACAAGCTTTCTCTTTTCAGTTCCAATTGATGGACCAATGTCATTTTCCACTTCAAAAGTTTCTGTGCAATGGTCTCTTCGATTTGAGTTCTTCACAACTCCCGAAGGAATTGATTCATCTAGGTATGAACATCCACTTCTCGTCGAGAAAAGAGAGAAGGGTGACTGGGTGCTTCCAATAACTGTTTATGCACCTCCATTGCGTAGGCAAGCAATTCATGGAAGAAATGGTAGATCTGTCTTAGTTGGGAACCTTTTCAACTCTTGAAGATGTGCATACAAGGTTCTGCTGTTCTTTTCAAAACCCCTACCAGTTTTGCTTCCGATGAGCTTCGACGAGTATTCTCTGTAGTTCACTTTGCACAGCTGGCCAGTTCC ATACCTCTAAAATACATGGGAGATCCGGAACACAT AAAGCGAGAACAAACTTGTGTTAGATCAAGTGTGCAAATCACAGAGTTC GTCACCTGAGAACAGGCAGCTGTGCCTTGATGTAACATCGGC ACTGCTTGATTACCT TGATGTACTATAGGCATTCCTTTGATAG AGGGACAAAACTTTTGGGGTGCTTGATTAGCTGTTATACCCCT TTTCATTCGGTATGTGTATACGTGAGACATCTGCCTTGTAATTCAATTCTTTTGTGGAAACCAAACATATAGCAGTACGCTGGTTGTCCAGAATCCAGATTACACACGTCCTG ] [+] EMBL CF324397 [ TTTCACAGAAAAGTAGCAACCTACTAAATGAAGAAGTGAACTTTCCACTCCCAATTGAGCAACCGGATATATTTTGGAGGGAAAAGGACGAAGATTCAGAATGGAGCAAAGCAAATGATAATACTGATTTAGAAGAAGGATATGATAGTTCAAAGGATGAAGTTTCATCTGTTTCCTCCTACAACAAAGCAAATCCAGAAAGCTCCCTCAGGAGCTCAGTGTCGATGCACTCCCTGTCATCACGTCTTTCCACTAGTGAACCATTGTATTCTAGAGAACGCCCCAGTTTCCCATCTTATAGTCCAATTCCTCGACTATCAGTATCAGAGATTTCAGATGATCATGGTGGAGGGT GT TGGTGTCACCTCAAAGGAAGCTAAATCATTTGCTGTCAGATCATCATCCATCAAATGGACAGATGTTTTCTCTAGATCCTGACCGCTCAAATGATGATGCTGGACCACCTCTCACACCAAAATATGTTGAAC ] [+] EMBL CF324113 [ AACTTTCCACTCCCAATTGAGCAACCGGATATATTTTGGAGGGAAAAGGACGAAGATTCAGAATGGAGCAAAGCAAATGATAATACTGATTTAGAAGAAGGATATGATAGTTCAAAGGATGAAGTTTCATCTGTTTCCTCCTACAACAAAGCAAATCCAGAAAGCTCCCTCAGGAGCTCAGTGTCGATGCACTCCCTGTCATCACGTCTTTCCACTAGTGAACCATTGTATTCTAGAGAACGCCCCAGTTTCCCATCTTATAGTCCAATTCCTCGACTATCAGTATCAGAGATTTCAGATGATCATGGTGGA GGT GNNTGGTGTCACCTCAAAGGAAGCTAAATCATTTGCTGTCAGATCATCATCCATCAAATGGACAGATGTTTTCTCTAGATCCTGACCGCTCAAATGATGATGCTGGACCACCTCTCACACCAAAATATGTTGAACCAGCTGGAT AAGGCTTTATGAGAGGAAGATCGTACAACATAAGAATAGATGACCAAGTGTTGCTTCGCTTCTCACCAAAGAATTCTGACTCAACTTATTACTTTGGTGATATGAA TTGGTGGAGCACTCACCTTCTTTCATG ] [+] EMBL CF324138 [ CAAATGATAATACTGATTTAGAAGAAGGATATGATAGTTCAAAGGATGAAGTTTCATCTGTTTCCTCCTACAACAAAGCAAATCCAGAAAGCTCCCTCAGGAGCTCAGTGTCGATGCACTCCCTGTCATCACGTCTTTCCACTAGTGAACCATTGTATTCTAGAGAACGCCCCAGTTTCCCATCTTATAGTCCAATTCCTCGACTATCAGTATCAGA ATTTCAGATGATC TGG GGA GGTGG TGGTGTCACCTCAAAGGAAGCTAAATCATTTGCTGTCAGATCATCATCCATCAAATGGACAGATGTTTTCTCTAGATCCTGACCGCTCAAATGATGATGCTGGACCACCTCTCACACCAAAATATGTTGAACCAGCTGGATCAGAAGGCTTTATGAGAGGAAGATCGTACAACATAAGAATAGATGACCAAGTGTTGCTTCGCTTCTCACCAAAGAATTCTGACTCAACTTATTACTTTGGTGATATG ANTTGGTGGAGCACTCACCTTCTTTCATGGATCTG ] [-] EMBL CB633744 [ AACGGTTAATCCTCGTGTAATACATCCTTCGAGAAGGAGCTCACCCTCAATAACCAAGGTACACAGTGAGCACTATGAAGTTGTTGCGGATCTTCACCAGACAAGCTTTCTCTTTTCAGTTCCAATTGATGGACCAATGTCATTTTCCACTTCAAAAGTTTCTGTGCAATGGTCTCTTCGATTTGAGTTCTTCACAACTCCCGAAGGAATTGATTCATCTAGGTATGAACATCCACTTCTCGTCGAGAAAAGAGAGAAGGGTGACTGGGTGCTTCCAATAACTGTTTATGCACCTCCATTGCGTAGGCAAGCAATTCATGGAAGAAATGATAGATCTGTCTTAGTTGGGAACCTTTTCAACTCTTGAAGATGTGCATACAAGGTTCTGCTGTTCTTTTCAAAACCCCTACCAGTTTTGCTTCCGATGAGCTTCGACAAGTATTCTCTGTAGTTCACTTTGCACAGCTGGCCAGTTCC ATACCTCTAAAATACATGGGAGATCCGGAACACAT AAAGCGAGAACAAACTTGTGTTAGATCAAGTGTGCAAATCACAGAGTTC GTCACCTGAGAACAGGCAGCTGTGCCTTGATGTAACATCGGC ACTGCTTGATTACCT TGATGTACTATAGGCATTCCTTTGATAG AGGGACAAAACTTTTGGGGTGCTTGATTAGCTGTTATACCCCT TTTCATTCGGTATGTGTATACGTGAGACATCTGCCTTGTAATTCAATTCTTTTGTGGAAACCAAACATATAGCAGTACGCTGGTTGTCCAGGATCCAGATTACACACGTCCTG ] [-] EMBL CB627745 [ TTGCGGATCTTCACCAGACAAGCTTTCTCTTTTCAGTTCCAATTGATGGACCAATGTCATTTTCCACTTCAAAAGTTTCTGTGCAATGGTCTCTTCGATTTGAGTTCTTCACAACTCCCGAAGGAATTGATTCATCTAGGTATGAACATCCACTTCTCGTCGAGAAAAGAGAGAAGGGTGACTGGGTGCTTCCAATAACTGTTTATGCACCTCCATTGCGTAGGCAAGCAATTCATGGAAGAAATGATAGATCTGTCTTAGTTGGGAACCTTTTCAACTCTTGAAGATGTGCATACAAGGTTCTGCTGTTCTTTTCAAAACCCCTACCAGTTTTGCTTCCGATGAGCTTCGACAAGTATTCTCTGTAGTTCACTTTGCACAGCTGGCCAGTTCC ATACCTCTAAAATACATGGGAGATCCGGAACACAT AAAGCGAGAACAAACTTGTGTTAGATCAAGTGTGCAAATCACAGAGTTC GTCACCTGAGAACAGGCAGCTGTGCCTTGATGTAACATCGGC ACTGCTTGATTACCT TGATGTACTATAGGCATTCCTTTGATAG AGGGACAAAACTTTTGGGGTGCTTGATTAGCTGTTATACCCCT TTTCATTCGGTATGTGTATACGTGAGACATCTGCCTTGTAATTCAATTCTTTTGTGGAAACCAAACATATAGGGGTACGCTGGTTGTCCAGAATCC ] [+] EMBL CB628120 [ TGCATACAAGGTTCTGCTGTTCTTTTCAAAACCCCTACCAGTTTTGCTTCCGATGAGCTTCGACAAGTATTCTCTGTAGTTCACTTTGCACAGCTGGCCAGTTCC ATACCTCTAAAATACATGGGAGATCCGGAACACAT AAAGCGAGAACAAACTTGTGTTAGATCAAGTGTGCAAATCACAGAGTTC GTCACCTGAGAACAGGCAGCTGTGCCTTGATGTAACATCGGC ACTGCTTGATTACCT TGATGTACTATAGGCATTCCTTTGATAG AGGGACAAAACTTTTGGGGTGCTTGATTAGCTGTTATACCCCT TTTCATTCGGTATGTGTATACGTGAGACATCTGCCTTGTAATTCAATTCTTTTGTGGAAACCAAACATATAGCAGTACGCTGGTTGTCCAGAATCCAGATTACACACGTCCTGTTTCTGAGACTATT] [+] EMBL AU174301 [ TCTGTAGTTCACTTTGCACAGNTGGCCAGTTCCAATACCTCTAAAATACATGGGAGATCCGGAACACATAAAAGCGAGAACAAACTTGTGTTAGATCAAGTGTGCAAATCACAGAGTTC GTCACCTGAGAACAGGCAGCTGTGCCTTGATGTAACATCGGC ACTGCTTGATTACCT TGATGTACTATAGGCATTCCTTTGATAG AGGGACAAAACTTTTGGGGTGCTTGATTAGCTGTTATACCCCT TTTCATTCGGTATGTGTATACGTGAGACATCTGCCTTGTAATTCAATTCTTTTGTGGAAACCAAACATATAGCAGTACGCTGGTTGTCCAGAATCCAGATTACACAaaaaa ] [+] EMBL BI809259 [ GAGTTCGGTCACCTGAG ACAGGCAGCTGTGCCTTGATGTAACATCGGCAACTGCTTGAGTACCTGTGATGTACTATAGGCATTCCTTTGATAGTAGGGACCAAACTTTTGGGGTGCTTGATTAGCTGTTATACCCCTGTTTCATTCGGTATGTGTATACGTGAGACATCTGCCc ] consensusID : consensus_15022#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 691 fasta sequence [CAAGCTTTCTTTTTTAGTTCCAAGTGATGGACCAATGTCATTTCCACTTCAAAAGTTCTGTGCAATGGTCTCTTCGATTTGAGTTCTCACAACTCCCGAAGGAATTGATTCATCTAGGTATGAACATCCCCTTCTTGTCGAGAACAGAGAGAAGGGTGACTGGGTGCTTCCAATAACTGTTTATGCACTTCCATTGCGTAGGCGAGCAATTCATGGAAGAAATGATAGATCTGTTTTAGTTGGGAACCTTTTCAACTCTTGAAGATGTGCATACAAGGTTTTGCTGTTCTTTTCAAAACCCCTACCAGTTTTGCTTTCGATGAGCTTCGACAAGTATTCTCTGTAGTTCACTTTGCACAGCTGGCCAGTTCCATACCTCTAAAATACATGGGAGATCCGGAACACATAAAGCGAGAACAAACTTGTGTTAGATCAAGTGTGCAAATCACAGAGTTCGTCACCTGAGAACAGGCAGCTGTGCCTTGATGTAACATTGGCACTGCTTGATTACCTTGATGTACTATAGGCATTCCTTTGATAGAGGGACAAAACTTTTGGGGTGCTTGATTAGCTGTTATACCCCTTTTCATTCGGTATGTGTATACGTGAGACATTTGCCTTGTAATTCAATTCTTTTGTGGAAACCAAACATATAGCAGTACGCTGGTTGTCCAGAAAAAAAAAAAAAAAA] [-] EMBL CA763362 [CAAGCTTTCTTTTTTAGTTCCAAGTGATGGACCAATGTCATTTCCACTTCAAAAGTTCTGTGCAATGGTCTCTTCGATTTGAGTTCTCACAACTCCCGAAGGAATTGATTCATCTAGGTATGAACATCCCCTTCTTGTCGAGAACAGAGAGAAGGGTGACTGGGTGCTTCCAATAACTGTTTATGCACTTCCATTGCGTAGGCGAGCAATTCATGGAAGAAATGATAGATCTGTTTTAGTTGGGAACCTTTTCAACTCTTGAAGATGTGCATACAAGGTTTTGCTGTTCTTTTCAAAACCCCTACCAGTTTTGCTTTCGATGAGCTTCGACAAGTATTCTCTGTAGTTCACTTTGCACAGCTGGCCAGTTCCATACCTCTAAAATACATGGGAGATCCGGAACACATAAAGCGAGAACAAACTTGTGTTAGATCAAGTGTGCAAATCACAGAGTTCGTCACCTGAGAACAGGCAGCTGTGCCTTGATGTAACATTGGCACTGCTTGATTACCTTGATGTACTATAGGCATTCCTTTGATAGAGGGACAAAACTTTTGGGGTGCTTGATTAGCTGTTATACCCCTTTTCATTCGGTATGTGTATACGTGAGACATTTGCCTTGTAATTCAATTCTTTTGTGGAAACCAAACATATAGCAGTACGCTGGTTGTCCAGAAAAAAAAAAAAAAAA] consensusID : consensus_15022#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 539 fasta sequence [GTTCGAGGAGAGGAAGGCCGATGCCGCGGCGGCCAGGCAGCGGCACTCCCCGAGATTGAAGCTCCCTGTCATCACGTCTTTCCACTAGTGAACCATTGTATTCTAGAGAACGCCCCAGTTTCCCATCTTATAGTCCAATTCCTCGACTATCAGTATCAGAGATTTCAGATGATCATGGTGGAGGGTGTGGTGTCACCTCAAAGGAAGCTAAATCATTTGCTGTCAGATCATCATCCATCAAATGGACAGATGTTTTCTCTAGATCCTGACCGCTCAAATGATGATGCTGGACCACCTCTCACACCAAAATATGTTGAACCAGCTGGATCAGAAGGCTTTATGAGAGGAAGATCGTACAACATAAGAATAGATGACCAAGTGTTGCTTCGCTTCTCACCAAAGAATTCTGACTCAACTTATTACTTTGGTGATATGAATTGGTGGAGCACTCACCTTCTTTCATGGATCTGGAACACGAAGATGCCTAGAGGTATCTGTTACCTTGGAAACATCAGAAACGGTTAATCCTCGTGTAATAC] [+] EMBL CF323649 [GTTCGAGGAGAGGAAGGCCGATGCCGCGGCGGCCAGGCAGCGGCACTCCCCGAGATTGAAGCTCCCTGTCATCACGTCTTTCCACTAGTGAACCATTGTATTCTAGAGAACGCCCCAGTTTCCCATCTTATAGTCCAATTCCTCGACTATCAGTATCAGAGATTTCAGATGATCATGGTGGAGGGTGTGGTGTCACCTCAAAGGAAGCTAAATCATTTGCTGTCAGATCATCATCCATCAAATGGACAGATGTTTTCTCTAGATCCTGACCGCTCAAATGATGATGCTGGACCACCTCTCACACCAAAATATGTTGAACCAGCTGGATCAGAAGGCTTTATGAGAGGAAGATCGTACAACATAAGAATAGATGACCAAGTGTTGCTTCGCTTCTCACCAAAGAATTCTGACTCAACTTATTACTTTGGTGATATGAATTGGTGGAGCACTCACCTTCTTTCATGGATCTGGAACACGAAGATGCCTAGAGGTATCTGTTACCTTGGAAACATCAGAAACGGTTAATCCTCGTGTAATAC] consensusID : consensus_15022#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 190 fasta sequence [CTTCTGTTTCCGATCCGATCTGCGGNGCGTCTCGCGCGCGGCCGCCGACGAGCCCCCGCGGAGCCGNNTCCTCCTCGCNGCGGAGGNCCGANCNTNTCCCCGGNCCCTCGCGCGCACGGCCGGCNGGCGAGCAGGCTCGGAGAGANAGNCGACGACCTCCCACTTCGANTCGAATCGAAGATTGGNAATC] [+] EMBL OSS3863A [CTTCTGTTTCCGATCCGATCTGCGGNGCGTCTCGCGCGCGGCCGCCGACGAGCCCCCGCGGAGCCGNNTCCTCCTCGCNGCGGAGGNCCGANCNTNTCCCCGGNCCCTCGCGCGCACGGCCGGCNGGCGAGCAGGCTCGGAGAGANAGNCGACGACCTCCCACTTCGANTCGAATCGAAGATTGGNAATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 TCTTCTCTTTCCGATCCGATCTGCGGTGCGTCTCGCGCGCGGCCGCCGACGAGCCCCCGC 60 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 GGCCCCGCCTCCTCCTCGCCGCGGCCGCCCGAGCCTCTCCCCGGCCCCTCGCGCGCACGG 120 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 CCGGCCGGCGAGCAGGCTCGGAGAGAGAGGCGACGACCTCCCACTTCGAATCGAATCGAA 180 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 GATTGGGAATCCGTTCGGTTTGTTAGCTTGGGGGATTTGGATAATTGGATTGGGTTGTTG 240 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 TTCTCGTTTTGAGGTTGATGCGGCGGTGGGGATATACGTTGAATCGGAGGCAACCTGTTT 300 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 GATGAAATGTCACTGAAGCTCCCGATCCCGCAAGGGCTCTCCTTCCTGAGAAGCGTCGGG 360 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 TGGTTCGAGGAGAGGAAGGCCGATGCCGCGGCGGCCAGGCAGCGGCACTCCCCGAGATTG 420 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 AAGCTCCAGACGGACAGGGAGGTGTACAGACCCGGTGATTCGGTCACCGCGACTATAGAG 480 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 ATCTGCACCCCAGCTGGGTTGAAGGATGACGCGGCGTCGGCGGAGACCGGTGAGGATGCC 540 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 CCCTCGCTCTTGGTGGATGGGCTCTCGTTCGAGATCAAAGGGATTGAGAAGTTGGATAGC 600 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 CAGTGGTTCTCTGTTTCAAAGCCCTTACCAGGGTCTAAGCAAAGGAGAGGTGAACATTTG 660 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 TTTCTGGATTGTTCGGCACCCTCGCTAATCCCTAAAGTTATAATTGCTTCGGGGCAAACA 720 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 AAAACATACATTGTACGTGTGGAGCTCCCGAAGATTTTACCACCATCATATAGGGGTATA 780 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 AGTGTCCGCTATATTTATTATGTTAAAAGTATATTGTTTGGAAGATCGATTGTATTGGGT 840 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 AATGGAGATCAAAATATTGCCCCTGTAAATACCGCAGTTCAATTGGAAGCTCGAGTCCCA 900 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 TTGCAGATATGTGTTTCACAGAAAAGTAGCAACCTACTAAATGAAGAAGTGAACTTTCCA 960 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 CTCCCAATTGAGCAACCGGATATATTTTGGAGGGAAAAGGACGAAGATTCAGAATGGAGC 1020 consensus_15022#1 --------------------------------------------------------CAAG 4 consensus_15022#2 -----------------------------------------------------------G 1 consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 AAAGCAAATGATAATACTGATTTAGAAGAAGGATATGATAGTTCAAAGGATGAAGTTTCA 1080 consensus_15022#1 CTTTCTTTTTTAGTTCCAAGTGATGGACCAATGTCATTTCCACTTCAAAAGTTCTGTGCA 64 consensus_15022#2 TTCGAGGAGAGGAAGGCCGATGCCGCGGCGGCCAGGCAGCGGCACTCCCCGAGAT-TGAA 60 consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 TCTGTTTCCTCCTACAACAAAGCAAATCCAGAAAGCTCCCTCAGGAGCTCAGTGT-CGAT 1139 consensus_15022#1 ATGGTCTCTTCGATTTGAGTTCTCACAACTCCCGAAGGAATTGATTCATCTAGGTATGAA 124 consensus_15022#2 GC--TCCCTGTCATCACGTCTTTCCACTAGTGAACCATTGTATTCTAGAGAACGCCCCAG 118 consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 GCACTCCCTGTCATCACGTCTTTCCACTAGTGAACCATTGTATTCTAGAGAACGCCCCAG 1199 consensus_15022#1 CATCCCCTTCTTGTCGAGAACAGAGAGAAGGGTGACTGGGTGCTTCCAATAACTGTTTAT 184 consensus_15022#2 TT--TCCCATCTTATAGTC---CAATTCCTCGACTATCAGTATCAGAGATTTCAGATGAT 173 consensus_15022#3 -C--TTCTGTTTC-CGATC---CGATCTGCGGNGCGTCT-CGCGCGCGGCCGCCGACGAG 52 consensus_15022#0 TT--TCCCATCTTATAGTC---CAATTCCTCGACTATCAGTATCAGAGATTTCAGATGAT 1254 consensus_15022#1 GCACTTCCATTGCGTAGGCGAGCAATTCATGGAAGAAATGATAGATCTGTTTTAGTTGGG 244 * * * * * ** * * * consensus_15022#2 CATGGTGGAGGGTGTGGTGTCACCTCAAAGGAAGCTAAATCATTTGCTGTCAGATCATCA 233 consensus_15022#3 CCCCCGCGGAGCCGNNTCCTCCTCGCNGCGGAGGNCCGANCNTNTCCC--CGGNCCCTCG 110 consensus_15022#0 CATGGTGGAGG-TGTGGTGTCACCTCAAAGGAAGCTAAATCATTTGCTGTCAGATCATCA 1313 consensus_15022#1 AACCTTTTCAACTCTTGAAGATGTGCATACAAGGTTTTGCTGTTCTTTTCAAAACCCCTA 304 * * * * * consensus_15022#2 TCCATCAAATGGACAGATGTTTTCTCTAGAT---CCTGACCGCTCAAATGATGATGCTGG 290 consensus_15022#3 CGCGCACGGCCGGCNGGCGAGC-----AGGC---TCGGAGAGAN-AGNCGACGACCTCCC 161 consensus_15022#0 TCCATCAAATGGACAGATGTTTTCTCTAGAT---CCTGACCGCTCAAATGATGATGCTGG 1370 consensus_15022#1 CCAGTTTTGCTTTCGATGAGCTTCGACAAGTATTCTCTGTAGTTCACTTTGCACAGCTGG 364 * * * * consensus_15022#2 ACCACCTCTCACACCAAAATATGTTGAACCAGCTGGATCAGAAGGCTTTATGAGAGGAAG 350 consensus_15022#3 ACTTCGANTCGAATCGAAGATTGGNAATC------------------------------- 190 consensus_15022#0 ACCACCTCTCACACCAAAATATGTTGAACCAGCTGGATCAGAAGGCTTTATGAGAGGAAG 1430 consensus_15022#1 CCAGTTCCATACCTCTAAAATACATGGGAGATCCGGAACACATAAA---GCGAGAACAAA 421 * * ** consensus_15022#2 ATCGTACAACATAAGAATAGATGACCAAGTGTTGCTTCGCTTCTCACCAAAGAATTCTGA 410 consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 ATCGTACAACATAAGAATAGATGACCAAGTGTTGCTTCGCTTCTCACCAAAGAATTCTGA 1490 consensus_15022#1 CTTGTGTTAGATCAAGTGTGCAAATCACAGAGTTCGTCACCTGAGAACAGGCAGCTGTGC 481 consensus_15022#2 CTCAACTTATTACTTTGGTGATATGAATTGGTGGAGCACTCACCTTCTTTCATGGATCTG 470 consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 CTCAACTTATTACTTTGGTGATATGA-TTGGTGGAGCACTCACCTTCTTTCATGGATCTG 1549 consensus_15022#1 CTTGATGTAACATTGGCACTGCTTGATTACCTTGATGTACTATAGGCATTCCTTTGATAG 541 consensus_15022#2 GAACACGAAGATGCCTAGAGGTATCTGTTACCTTGGAAACA--TCAGAAACGGTTAATCC 528 consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 GAACACGAAGATGCCTAGAGGTATCTGTTACCTTGGAAACA--TCAGAAACGGTTAATCC 1607 consensus_15022#1 AGGGACAAAACTTTTGGGGTGCTTGATTAGCTGTTATACCCCTTTTCATTCGGTATGTGT 601 consensus_15022#2 TCGTGTAATAC------------------------------------------------- 539 consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 TCGTGTAATACATCCTTCGAGAAGGAGCTCACCCTCAATAACCAAGGTACACAGTGAGCA 1667 consensus_15022#1 ATACGTGAGACATTTGCCTTGTAATTCAATTCTTTTGTGGAAACCAAACATATAGCAGTA 661 consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 CTATGAAGTTGTTGCGGATCTTCACCAGACAAGCTTTCTCTTTTCAGTTCCAATTGATGG 1727 consensus_15022#1 CGCTGGTTGTCCAGAAAAAAAAAAAAAAAA------------------------------ 691 consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 ACCAATGTCATTTTCCACTTCAAAAGTTTCTGTGCAATGGTCTCTTCGATTTGAGTTCTT 1787 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 CACAACTCCCGAAGGAATTGATTCATCTAGGTATGAACATCCACTTCTCGTCGAGAAAAG 1847 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 AGAGAAGGGTGACTGGGTGCTTCCAATAACTGTTTATGCACCTCCATTGCGTAGGCAAGC 1907 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 AATTCATGGAAGAAATGATAGATCTGTCTTAGTTGGGAACCTTTTCAACTCTTGAAGATG 1967 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 TGCATACAAGGTTCTGCTGTTCTTTTCAAAACCCCTACCAGTTTTGCTTCCGATGAGCTT 2027 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 CGACAAGTATTCTCTGTAGTTCACTTTGCACAGCTGGCCAGTTCCATACCTCTAAAATAC 2087 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 ATGGGAGATCCGGAACACATAAAGCGAGAACAAACTTGTGTTAGATCAAGTGTGCAAATC 2147 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 ACAGAGTTCGTCACCTGAGAACAGGCAGCTGTGCCTTGATGTAACATCGGCACTGCTTGA 2207 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 TTACCTTGATGTACTATAGGCATTCCTTTGATAGAGGGACAAAACTTTTGGGGTGCTTGA 2267 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 TTAGCTGTTATACCCCTTTTCATTCGGTATGTGTATACGTGAGACATCTGCCTTGTAATT 2327 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------------------------------------------ consensus_15022#3 ------------------------------------------------------------ consensus_15022#0 CAATTCTTTTGTGGAAACCAAACATATAGCAGTACGCTGGTTGTCCAGAATCCAGATTAC 2387 consensus_15022#1 ------------------------------------------------------------ consensus_15022#2 ------------------------ consensus_15022#3 ------------------------ consensus_15022#0 ACACGTCCTGTTTCTGAGACTATT 2411 consensus_15022#1 ------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||