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Oryza sativa
cluster # 1503 cluster # 1503       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1503#0 length = 1666 sequences # 2  

consensusID : consensus_1503#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1666
fasta sequence
                              [CTTGGAGGATAAGATCTCAAATTTAGAAGATGAGAACCATTTATTGAGGCAGAAGGCCTTAAGCTTATCTCCTAGGCATAGCCGCACCATGAGCCATCCTATTGGGTCTTCCCCATGCAGCCCAAAGTCATTGATTGAATCTTCACCTGTAAAGATCGTGCCTCTCCCGCACAACCCGACAGAGTTAAGAAGATCAAGAATGAACTCAGAAAGACATGAGGAGTACCACGAACTTCTACAGCGGTGCATCAAGGATGATATGGGATTCAAGAAGGGAAAACCAGTCGCTGCATGTGTCATTTACAAATGTCTTCTCCATTGGGGAGTATTCGAGGCTGAAAGAACAACTATTTCGACTTCATAATTCAGAACATCAATACAGTTCTGAAGACAGAAAATGAGAATGATATTCTGCCTTACTGGCTAGCCAATGCATCTGCCCTTTTATGTCTGTTGCAAAGAAACTTACGGTCAAAAGGATTCATCGCGGCGCCTTCTAGATCTTCTTCAGATCCTCACTTATGTGAAAAGGCAAATGATGCTCTCAGACCACCTTTGAAAGCTTTTGGACAACGGAATAGCATGTCGCATATAGATGCTAAATACCCAGCTATGTTGTTTAAGCAACAACTAACTGCTTCCTTGGAGAAGATATTTGGCTTAATCCGTGACAATCTTAAGAAAGAGATATCACCTCTTTTGAGCCTCTGCATTCAAGCACCAAAACTTGCTCGAGGAGGCAGTGGAAGGAGGTCGAGATCGCCTGATGTGACCTTGCAGCAACCAATAAGTGCTCACTGGGATCGGATTATAAAATTTTTGGACTCATTGATGGACAGGCTGCATAAAAACTTTGTGCCTTCTTTTTTCATTCGCAAGCTAGTAACTCAAGTTTTCTCCTTCATAAATGTACAATTGTTCAATAGCTTGCTCCTACGACGGGAGTGTTGCACATTTTCAAATGGAGAATATGTGAAAACTGGGCTCTGTGTACTGGAGAAATGGATTCTGGATGCTACAGAAGAGCATGCAGGTGCAGCTTGGGATGAGCTAAAGTACATCAGAGAGGCGGTTGAATTTCTGATTATTGCACAGAAAAGCAAAAGGACTCTTGAGCAGATTAAGAAAAATATTTGTCCGGCGTTAAGTGTGAGGCAGATATATCGTCTATGTACGATGTACTGGGATGACAAATATGGTACCCACAGTGTATCAGCCGAGGTTGTTGCCAAAATGAGGGACATGGTGAGCAGCGATGCACAAAATCCAGTGTCAAATTCATTTCTCTTGGATGACGACTTGAGCATTCCTTTCACGACAGAGGAGATAGCAGAGGAAGTACCGGACATAGACATGCCAAACATCGAGATGCCCTCATCACTTCGTCATGTACACTCTGCTCAGTTCCTGATGCAGCACCTTCAGACAACGTACCCGCTAAGATGAATTTGCCTAGGCGTGTTATCTGATAGGCGATAAGGATGATCCAATTGCTTAGTTAGAGAGGAATTTTAAGTCAGTAATCATCATGTGGTTTGCCTAGATTTTTCTCAGTATGACTCGGTGATCCACTTAAAATGGCGCATTGCTTTGTTGCCATGCCTAGCACAAACCTAAAATTGCAGAATCTAAGGATAAAAATGTGAAGTCTTTAACATGGTGACAT]

[+] EMBL AK119317             [CTTGGAGGATAAGATCTCAAATTTAGAAGATGAGAACCATTTATTGAGGCAGAAGGCCTTAAGCTTATCTCCTAGGCATAGCCGCACCATGAGCCATCCTATTGGGTCTTCCCCATGCAGCCCAAAGTCATTGATTGAATCTTCACCTGTAAAGATCGTGCCTCTCCCGCACAACCCGACAGAGTTAAGAAGATCAAGAATGAACTCAGAAAGACATGAGGAGTACCACGAACTTCTACAGCGGTGCATCAAGGATGATATGGGATTCAAGAAGGGAAAACCAGTCGCTGCATGTGTCATTTACAAATGTCTTCTCCATTGGGGAGTATTCGAGGCTGAAAGAACAACTATTTCGACTTCATAATTCAGAACATCAATACAGTTCTGAAGACAGAAAATGAGAATGATATTCTGCCTTACTGGCTAGCCAATGCATCTGCCCTTTTATGTCTGTTGCAAAGAAACTTACGGTCAAAAGGATTCATCGCGGCGCCTTCTAGATCTTCTTCAGATCCTCACTTATGTGAAAAGGCAAATGATGCTCTCAGACCACCTTTGAAAGCTTTTGGACAACGGAATAGCATGTCGCATATAGATGCTAAATACCCAGCTATGTTGTTTAAGCAACAACTAACTGCTTCCTTGGAGAAGATATTTGGCTTAATCCGTGACAATCTTAAGAAAGAGATATCACCTCTTTTGAGCCTCTGCATTCAAGCACCAAAACTTGCTCGAGGAGGCAGTGGAAGGAGGTCGAGATCGCCTGATGTGACCTTGCAGCAACCAATAAGTGCTCACTGGGATCGGATTATAAAATTTTTGGACTCATTGATGGACAGGCTGCATAAAAACTTTGTGCCTTCTTTTTTCATTCGCAAGCTAGTAACTCAAGTTTTCTCCTTCATAAATGTACAATTGTTCAATAGCTTGCTCCTACGACGGGAGTGTTGCACATTTTCAAATGGAGAATATGTGAAAACTGGGCTCTGTGTACTGGAGAAATGGATTCTGGATGCTACAGAAGAGCATGCAGGTGCAGCTTGGGATGAGCTAAAGTACATCAGAGAGGCGGTTGAATTTCTGATTATTGCACAGAAAAGCAAAAGGACTCTTGAGCAGATTAAGAAAAATATTTGTCCGGCGTTAAGTGTGAGGCAGATATATCGTCTATGTACGATGTACTGGGATGACAAATATGGTACCCACAGTGTATCAGCCGAGGTTGTTGCCAAAATGAGGGACATGGTGAGCAGCGATGCACAAAATCCAGTGTCAAATTCATTTCTCTTGGATGACGACTTGAGCATTCCTTTCACGACAGAGGAGATAGCAGAGGAAGTACCGGACATAGACATGCCAAACATCGAGATGCCCTCATCACTTCGTCATGTACACTCTGCTCAGTTCCTGATGCAGCACCTTCAGACAACGTACCCGCTAAGATGAATTTGCCTAGGCGTGTTATCTGATAGGCGATAAGGATGATCCAATTGCTTAGTTAGAGAGGAATTTTAAGTCAGTAATCATCATGTGGTTTGCCTAGATTTTTCTCAGTATGACTCGGTGATCCACTTAAAATGGCGCATTGCTTTGTTGCCATGCCTAGCACAAACCTAAAATTGCAGAATCTAAGGATAAAAATGTGAAGTCTTTAACATGGTGACAT]
[+] EMBL CA766719             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                gggGGAGAAATGGATTCTGGATGCTACAGAAGAGCATGCAGGTGCAGCTTGGGATGAGCTAAAGTACATCAGAGAGGCGGTTGAATTTCTGATTATTGCACAGAAAAGCAAAAGGACTCTTGAGCAGATTAAGAAAAATATTTGTCCGGCGTTAAGTGTGAGGCAGATATATCGTCTATGTACGATGTACTGGGATGACAAATATGGTACCCACAGTGTATCAGCCGAGGTTGTTGCCAAAATGAGGGACATGGTGAGCAGCGATGCACAAAATCCAGTGTCAAATTCATTTCTCTTGGATGACGACTTGAGCATTCCTTTCACGACAGAGGAGATAGCAGAGGAAGTACCGGACATAGACATGTCAAACATCGAGATGCCCTCATCACTTCGTCATGTACACTCTGCTCAGTTCCTGATGCAGCACCTTCAGACAACGTACCCGCTAAGATGAATTTGCCTAGGCGTGTTATCTGATAGGCGATAAGAATGATCCAATTGCTTAGTTAGAGAGGAATTTTAAGTCAGTAATCATCATGTGGTTTGCCTAGATTTTTCTCAGTATGACTCGGTGATCCACTCAAAATGGCGCATTGCTTTGTTGCCATGCCTAGCACAAACCTAAAATTGCAGAATCTAANGATAAAAATGTGAAGTCTTTAAC          ]


>consensus_1503#0 CTTGGAGGATAAGATCTCAAATTTAGAAGATGAGAACCATTTATTGAGGCAGAAGGCCTT AAGCTTATCTCCTAGGCATAGCCGCACCATGAGCCATCCTATTGGGTCTTCCCCATGCAG CCCAAAGTCATTGATTGAATCTTCACCTGTAAAGATCGTGCCTCTCCCGCACAACCCGAC AGAGTTAAGAAGATCAAGAATGAACTCAGAAAGACATGAGGAGTACCACGAACTTCTACA GCGGTGCATCAAGGATGATATGGGATTCAAGAAGGGAAAACCAGTCGCTGCATGTGTCAT TTACAAATGTCTTCTCCATTGGGGAGTATTCGAGGCTGAAAGAACAACTATTTCGACTTC ATAATTCAGAACATCAATACAGTTCTGAAGACAGAAAATGAGAATGATATTCTGCCTTAC TGGCTAGCCAATGCATCTGCCCTTTTATGTCTGTTGCAAAGAAACTTACGGTCAAAAGGA TTCATCGCGGCGCCTTCTAGATCTTCTTCAGATCCTCACTTATGTGAAAAGGCAAATGAT GCTCTCAGACCACCTTTGAAAGCTTTTGGACAACGGAATAGCATGTCGCATATAGATGCT AAATACCCAGCTATGTTGTTTAAGCAACAACTAACTGCTTCCTTGGAGAAGATATTTGGC TTAATCCGTGACAATCTTAAGAAAGAGATATCACCTCTTTTGAGCCTCTGCATTCAAGCA CCAAAACTTGCTCGAGGAGGCAGTGGAAGGAGGTCGAGATCGCCTGATGTGACCTTGCAG CAACCAATAAGTGCTCACTGGGATCGGATTATAAAATTTTTGGACTCATTGATGGACAGG CTGCATAAAAACTTTGTGCCTTCTTTTTTCATTCGCAAGCTAGTAACTCAAGTTTTCTCC TTCATAAATGTACAATTGTTCAATAGCTTGCTCCTACGACGGGAGTGTTGCACATTTTCA AATGGAGAATATGTGAAAACTGGGCTCTGTGTACTGGAGAAATGGATTCTGGATGCTACA GAAGAGCATGCAGGTGCAGCTTGGGATGAGCTAAAGTACATCAGAGAGGCGGTTGAATTT CTGATTATTGCACAGAAAAGCAAAAGGACTCTTGAGCAGATTAAGAAAAATATTTGTCCG GCGTTAAGTGTGAGGCAGATATATCGTCTATGTACGATGTACTGGGATGACAAATATGGT ACCCACAGTGTATCAGCCGAGGTTGTTGCCAAAATGAGGGACATGGTGAGCAGCGATGCA CAAAATCCAGTGTCAAATTCATTTCTCTTGGATGACGACTTGAGCATTCCTTTCACGACA GAGGAGATAGCAGAGGAAGTACCGGACATAGACATGCCAAACATCGAGATGCCCTCATCA CTTCGTCATGTACACTCTGCTCAGTTCCTGATGCAGCACCTTCAGACAACGTACCCGCTA AGATGAATTTGCCTAGGCGTGTTATCTGATAGGCGATAAGGATGATCCAATTGCTTAGTT AGAGAGGAATTTTAAGTCAGTAATCATCATGTGGTTTGCCTAGATTTTTCTCAGTATGAC TCGGTGATCCACTTAAAATGGCGCATTGCTTTGTTGCCATGCCTAGCACAAACCTAAAAT TGCAGAATCTAAGGATAAAAATGTGAAGTCTTTAACATGGTGACAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)