|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15039#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1047 fasta sequence
[ACAACCTCAGTGGAGCTCACCCTTATCCCCCCCAGCTCCAGAACCTTCTCCTCTCTCCTCTCTCGCTCGCTCGCTTCTCGCGGTTGTCGTCGGCGGTAGCGAGCTCATGGCGTCGGTGCAGCTGTCCGCCGGCCCGCGGGTGTCAGTGTCACCGGCGGCGGCGCTGGTGGCGATGCCTTCGGTCGCCGCCGCCGCATCGAGGGGGCGCCGCGGGTACCGGGGGCTCGTCGTGAGGGCCGCCACGGTCGTGTCGCCCAAGTATACTTCTATCAAACCCTTGGGAGATAGGGTGCTTGTGAAGATCAAGACCTCTGATGATAAAACTGTTGGAGGAATATTACTTCCAACATCAGTTCAGTCAAAACCGCAAGGAGGACAAGTTGT-AGCAGTTGGAG-AGGGGAGAAGCATGGGCAGCGACAGCATAGAGATCAGTGTTCCAGTTGGTGCACAAGTTGTCTACTCTAAATATGCTGGCACAGAGTTGGAATTCGATGGGTCT-GA-CCATCTCATTTTGAAAG-AAGATGACATCATTGGTATTCTCGACACAGATGATGTGAAAGATCTGAAGCCACTGAATGA-CCGTGTTCTCATTAAGGTTGCAG-A-GGCTGAAGAGAAAACTGCAGGTGGTTTGCTATTGACACAAGCGACCAAAGAAAAGCCTTCTATTGGAACAGTGACAG-CCGTAGGCCCAGG-ACCATTGGTTGAGG-ATGGCAGCAGGAAACCCTTGTCAATCA-CTCCTGGGAATA-CCGTGATGTACTCCAAGTACGCGGGAAGCGAGTTTAAGGGTGAAGATGGCGAATATATTGTTCTCAGGGTATCCGACGTAATGGCTGTTCTTTCCTAA-GCAGACAACGCTCTTGCGAAATAGGATTTTCTTTAAGAAAACATGTGAAATAGGAATTTTGATATTTAGTCAAAACTTTGTTGCACTGCTCTTGCTTGGAAATGGTGTATCGCTGCTATTCCTACTTGATGTCACTGCAAAATGCAGAGTTCAATACAGGACGTGCTCTTTAGACTTTGGACATATAATAATGCTGTGCTGCT]
[+] EMBL AK061837 [ACAACCTCAGTGGAGCTCACCCTTATCCCCCCCAGCTCCAGAACCTTCTCCTCTCTCCTCTCTCGCTCGCTCGCTTCTCGCGGTTGTCGTCGGCGGTAGCGAGCTCATGGCGTCGGTGCAGCTGTCCGCCGGCCCGCGGGTGTCAGTGTCACCGGCGGCGGCGCTGGTGGCGATGCCTTCGGTCGCCGCCGCCGCATCGAGGGGGCGCCGCGGGTACCGGGGGCTCGTCGTGAGGGCCGCCACGGTCGTGTCGCCCAAGTATACTTCTATCAAACCCTTGGGAGATAGGGTGCTTGTGAAGATCAAGACCTCTGATGATAAAACTGTTGGAGGAATATTACTTCCAACATCAGTTCAGTCAAAACCGCAAGGAGGACAAGTTGT AGCAGTTGGAG AGGGGAGAAGCATGGGCAGCGACAGCATAGAGATCAGTGTTCCAGTTGGTGCACAAGTTGTCTACTCTAAATATGCTGGCACAGAGTTGGAATTCGATGGGTCT GA CCATCTCATTTTGAAAG AAGATGACATCATTGGTATTCTCGACACAGATGATGTGAAAGATCTGAAGCCACTGAATGA CCGTGTTCTCATTAAGGTTGCAG A GGCTGAAGAGAAAACTGCAGGTGGTTTGCTATTGACACAAGCGACCAAAGAAAAGCCTTCTATTGGAACAGTGACAG CCGTAGGCCCAGG ACCATTGGTTGAGG ATGGCAGCAGGAAACCCTTGTCAATCA CTCCTGGGAATA CCGTGATGTACTCCAAGTACGCGGGAAGCGAGTTTAAGGGTGAAGATGGCGAATATATTGTTCTCAGGGTATCCGACGTAATGGCTGTTCTTTCCTAA GCAGACAACGCTCTTGCGAAATAGGATTTTCTTTAAGAAAACATGTGAAATAGGAATTTTGATATTTAGTCAAAACTTTGTTGCACTGCTCTTGCTTGGAAATGGTGTATCGCTGCTATTCCTACTTGATGTCACTGCAAAATGC ]
[+] EMBL AK098903 [ CCCTTATCCCCCCCAGCTCCAGAACCTTCTCCTCTCTCCTCTCTCGCTCGCTCGCTTCTCGCGGTTGTCGTCGGCGGTAGCGAGCTCATGGCGTCGGTGCAGCTGTCCGCCGGCCCGCGGGTGTCAGTGTCACCGGCGGCGGCGCTGGTGGCGATGCCTTCGGTCGCCGCCGCCGCATCGAGGGGGCGCCGCGGGTACCGGGGGCTCGTCGTGAGGGCCGCCACGGTCGTGTCGCCCAAGTATACTTCTATCAAACCCTTGGGAGATAGGGTGCTTGTGAAGATCAAGACCTCTGATGATAAAACTGTTGGAGGAATATTACTTCCAACATCAGTTCAGTCAAAACCGCAAGGAGGACAAGTTGT AGCAGTTGGAG AGGGGAGAAGCATGGGCAGCGACAGCATAGAGATCAGTGTTCCAGTTGGTGCACAAGTTGTCTACTCTAAATATGCTGGCACAGAGTTGGAATTCGATGGGTCT GA CCATCTCATTTTGAAAG AAGATGACATCATTGGTATTCTCGACACAGATGATGTGAAAGATCTGAAGCCACTGAATGA CCGTGTTCTCATTAAGGTTGCAG A GGCTGAAGAGAAAACTGCAGGTGGTTTGCTATTGACACAAGCGACCAAAGAAAAGCCTTCTATTGGAACAGTGACAG CCGTAGGCCCAGG ACCATTGGTTGAGG ATGGCAGCAGGAAACCCTTGTCAATCA CTCCTGGGAATA CCGTGATGTACTCCAAGTACGCGGGAAGCGAGTTTAAGGGTGAAGATGGCGAATATATTGTTCTCAGGGTATCCGACGTAATGGCTGTTCTTTCCTAA GCAGACAACGCTCTTGCGAAATAGGATTTTCTTTAAGAAAACATGTGAAATAGGAATTTTGATATTTAGTCAAAACTTTGTTGCACTGCTCTTGCTTGGAAATGGTGTATCGCTGCTATTCCTACTTGATGTCACTGCAAAATGCAGAGTTCAATACAGGACGTGCTCTTTA ]
[+] EMBL C28675 [ CCTCTCTCGCTCGCTCGCTTCTCGCGGTTGTCGTCGGCGGTANCGAGCTCATGGCGTCGGTGCAGCTGTCCGCCGGCCCGCGGGTGTCAGTGTCACTGGCGGCGGCGCTGGTGGCGATGCCTTCGGTCGCCGCNGCCGCATCGAGGGGGCGCCGCGGGTACCGGGGGCTCGTCGTGAGGGCCGCCACGGTCGTTTCGCCCAANTATACTTCTATNAAACCCTTGGGAGATAGGGTGCTTGTNAAGATCAANACCTCTGATGATAAAACTNTTGGAGGAATATTACTTCCAACATCAGTTCAGTCAAAACCGCAAGGAGGACAAGTTTTAAGCANTTGGAGAAGGGGAGAAG ]
[+] EMBL OSS14133A [ CTCTCTCGCTCGCTCGCTTCTNGCGGTTGTNGTCGGCGGTAGCGAGCTCATGGCGTCGGTGCAGCTGTCCGCCGGCCCGCGGGTGTCAGTNTCACNGGCGGCGGCGCTGGTGGCGATGCCTTCGGTCGCCGCNGCCGCATCGAGGGGGCGCCGCGGGTACCGGGGGCTCGTNGTGAGGGCCGCCACGGTCGTNTCGCCCAAGTATACTTNTATAAAACCCTTGGGAGATAGGGTGCTTGTAAAGATCAAAACCTCTGATGATAAAACTGTTGGAGGAATATTACTTCCAACATCAGTTCAGTCAAAACCGCAA GNGGACAAGTTGT AGAAG ]
[+] EMBL AU108867 [ TCTCTCGCTCGCTCGCTTCTCGCGGTTGTCGTCGGCGGTAGCGAGCTCATGGCGTCGGTGCAGCTGTCCGCCGGCCCGCGGGTGTCAGTGTCACNNGCGGCGGCGCTGGTGGCGATNCCTTCGGTCGCCGCCGCCGCATCGAGGGGGCGCCGCGGGTA CNGGGGCTCGTCGTGAGGNCCGCCACGGTCGTGTCGCCCAAGTATACTTCTATCAAACCCTTGGGAGATAAGGTGCTTGTGAAGATCAAGACCTCTGATGATAAAACTGTTGGAGGAATATTACTTCCAACATCAGTTCAGTCAAAACCGCAAGGAGGACAAG ]
[+] EMBL CB655919 [ TCCGCCGGCCCGCGGGTGTCAGTGTCACCGGCGGCGGCGCTGGTGGCGATGCCTTCGGTCGCCGCCGCCGCATCGAGGGGGCGCCGCGGGTACCGGGGGCTCGTCGTGAGGGCCGCCACGGTCGTGTCGCCCAAGTATACTTCTATCAAACCCTTGGGAGATAGGGTGCTTGTGAAGATCAAGACCTCTGATGATAAAACTGTTGGAGGAATATTACTTCCAACATCAGTTCAGTCAAAACCGCAAGGAGGACAAGTTGT AGCAGTTGGAG AGGGGAGAAGCATGGGCAGCGACAGCATAGAGATCAGTGTTCCAGTTGGTGCACAAGTTGTCTACTCTAAATATGCTGGCACAGAGTTGGAATTCGATGGGTCT GA CCATCTCATTTTGAAAG AAGATGACATCATTGGTATTCTCGACACAGATGATGTGAAAGATCTGAAGCCACTGAATGA CCGTGTTCTCATTAAGGTTGCAG A GGCTGAAGAGAAAACTGCAGGTGGTTTGCTATTGACACAAGCGACCAAAGAAAAGCCTTCTATTGGAACAGTGACAG CCGTAGGCCCAGG ACCATTGGTTGAGG ATGGCAGCAGGAAACCCTTGTCAATCA CTCCTGCGAATA CCGTGATGTACTCCAAGTACGCGGGAAGCGAGTTTAAAGGTGAAGATGGCGAA ]
[-] EMBL CB655920 [ TACTTCTATCAAACCCTTGGGAGATAGGGTGCTTGTGAAGATCAAGACCTCTGATGATAAAACTGTTGGAGGAATATTACTTCCAACATCAGTTCAGTCAAAACCGCAAGGAGGACAAGTTGT AGCAGTTGGAG AGGGGAGAAGCATGGGCAGCGACAGCATAGAGATCAGTGTTCCAGTTGGTGCACAAGTTGTCTACTCTAAATATGCTGGCACAGAGTTGGAATTCGATGGGTCT GA CCATCTCATTTTGAAAG AAGATGACATCATTGGTATTCTCGACACAGATGATGTGAAAGATCTGAAGCCACTGAATGA CCGTGTTCTCATTAAGGTTGCAG A GGCTGAAGAGAAAACTGCAGGTGGTTTGCTATTGACACAAGCGACCAAAGAAAAGCCTTCTATTGGAACAGTGACAG CCGTAGGCCCAGG ACCATTGGTTGAGG ATGGCAGCAGGAAACCCTTGTCAATCA CTCCTGGGAATA CCGTGATGTACTCCAAGTACGCGGGAAGCGAGTTTAAGGGTGAAGATGGCGAATATATTGTTCTCAGGGTATCCGACGTAATGGCTGTTCTTTCCTAA GCAGACAACGCTCTTGCGAAATAGGATTTTCTTTAAGAAAACATGTGAAATAGGAATTTTGATATTTAGTCAAAACTTTGTTGCACTGCTCTTGCTTGGAAATGGTGTATCGCTGCTATTCCTACTTGATGTCACTGCAAAATGCAGAGTTCAATACAGGACGTGCTCTTTAGAC ]
[+] EMBL CA764694 [ AGGGGAGAAGCATGGGCAGCGACAGCATAGAGATCAGTGTTCCAGTTGGTGCACAAGTTGTCTACTCTAAATATGCTGGCACAGAGTTGGAATTCGATGGGTCT GA CCATCTCATTTTGAAAG AAGATGACATCATTGGTATTCTCGACACAGATGATGTGAAAGATCTGAAGCCACTGAATGA CCGTGTTCTCATTAAGGTTGCAGNAGGGCTGGAGAGAAAACTGCAGGTGGTTTGCTATTGACACAAGCGACCAAAGAAAAGCCT ]
[+] EMBL BQ906720 [ ggtctggGGCACAGAGTTGGAATTCGATGGGTCTGGACCCATCTCATTTTGAAAGTAAGATGACATCATTGGTATTCTCGACACAGATGATGTGAAAGATCNGAAGCCACTGAATGACCCGTGTTCTCATTAAGGTTGCAG A GGCTGAAGAGAAAACGGCAGGTGGTTTGCTATTGACACAAGCGACCAAAGAAAAGCCTTCTATTGGAACAGTGACAGCCCGTAGGCCCAGGTACCATTGGTTGAGGTATGGCAGCAGGAAACCCTTGTCAATCATCTCCTGGGAATACCCGTGATGTACTCCAAATACGCGGGAAGCGAGTTTAAGGGTGAAGATGGCGAATATATTGTTCTCAGGGTATCCGACGTAATGGCTGTTCTTTCCTAACGCAGACAACGCTCTTGCGAAATAGGATTTTCTTTAAGAAAACATGTGAAATAGGAATTTTGATATTTAGTCAAAACTTTGTTGCACTGCTCTTGCTTGGAAATGGTGTATCGCTGCTATTCCTAaaaaaaaaa ]
[-] EMBL BI306214 [ A CCATCTCATTTTGAAAG AAGATGACATCATTGGTATTCTCGACACAGATGATGTGAAAGATCTGAAGCCACTGAATGA CCGTGTTCTCATTAAGGTTGCAG A GGCTGAAGAGAAAACTGCAGGTGGTTTGCTATTGACACAAGCGACCAAAGAAAAGCCTTCTATTGGAACAGTGACAG CCGTAGGCCCAGG ACCATTGGTTGAGG ATGGCAGCAGGAAACCCTTGTCAATCA CTCCTGGGAATA CCGTGATGTACTCCAAATACGCGGGAAGCGAGTTTAAGGGTGAAGATGGCGAATATATTGTTCTCAGGGTATCCGACGTAATGGCTGTTCTTTCCTAA GCAGACAACGCTCTTGCGAAATAGGATTTTCTTTAAGAAAACATGTGAAATAGGAATTTTGATATTTAGTCAAAACTTTGTTGCACTGCTCTTGCTTGGAAATGGTGTATCGCTGCTATTCCTACTTGATGTCACTGCAAAATGCAGAGTTCAATACAGGACGTGCTCTTTAGACTTTGGACATATAATAATGCTGTGCTGCT]
[-] EMBL CB965929 [ CCATCTCATTCTGAAAG AAGATCACATCATTGGTATTCTCGACACAGATGATGTGAAAGATCTGAAGCCACTGAATGA CCGTGTTCTCATTAAGGTTGCAG A GGCTGAAGAGAAAACTGCAGTTGGTTTGCTATTGACACAAGCGACCTAAGAAAAGCCTTCTATTGGAACAGTGACAG CCGTAGGCCCAGG ACCATTGGTTGAGG ATGGCAGCAGGAAACCCTTGTCAATCA CTCCTGGGAATA CCGTGATGTACTCCAAATACGCGGGAAGCGAGTTTAAGGGTGAAGATGGCGAATATATTGTTCTCAGGGTATCCGACGTAATGGCTGTTCTTTCCTAA GCAGACAACGCTCTTGCGAAATAGGATTTTCTTTAAGAAAACATGTGAAATAGGAATTTTGATATTTAGTCAAAACTTTGTTGCACTGCTCTTGCTTGGAAATGGTGTATCGCTGCTATTCCTACTTGATGTCACTGCAAAATGCAGAGTTCAATACAGGACGTGCTCTTTAGACTTTGGACATATAATAATGCTGTGCTGCT]
consensusID : consensus_15039#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 685 fasta sequence
[ACCNGCAAGGAGGCCAAGTTGTANCAGTTGAAAAGGGGAAGAAGCATGGCAGCGACAGCATAGAGATCCAGTGTT-CCAGTTGGTG-CACAAGTTGTCTACTCT-AAATATGCTG-GCACAGAGTTGNAATTCGATGGGTCTGACCA-TCTCATTTTGAAAGAAGATGACAT-CATT-GGTATTCTCGACA-CAGATGATGTGAAAGATCTGAAG-CCA-CTGAATGACCGTGTTCTCATTAAGGTTG-CAGAGGCTGAAGAG-AAAACTGCAGGTGGTTTGCTATTGACACAAGCGACCA-AAGAAAAGCCTTCTATTGGAACAGTGACAGCCGTAGGCCCAGGACCA-TTGGTTGAGGATGGCAGCAGGAAACCCTTGTCAATCACTCCTGGGAATACCGTGATGTACTCCAAGTACGCGGGAAGCGAGT-TTAAGGGTGAAGA-TGGCGAATATA-TTGTTCT-CAGGGTATCCGACGTAAT-GGCTGTTCTTTCCTAAGCAGACAACGCTCTTGCGAAA-TAGGATTTTCT-TTAAGAA-AA-CATGTGAAATAGGAAT-TTTGATA-TTTAGTCAAAACTTTGTTGCA-CTGCTCTTGCTTGGAAATGGTGTATCGCTGCTATTCCTACTTGATGTCACTGC-AAATGCAGAGTTCAATA-CAGGACGTGCTCTTTAGACTTTGG-ACAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU091808 [ACCNGCAAGGAGGCCAAGTTGTANCAGTTGAAAAGGGGAAGAAGCATGGCAGCGACAGCATAGAGATCCAGTGTT CCAGTTGGTG CACAAGTTGTCTACTCT AAATATGCTG GCACAGAGTTGNAATTCGATGGGTCTGACCA TCTCATTTTGAAAGAAGATGACAT CATT GGTATTCTCGACA CAGATGATGTGAAAGATCTGAAG CCA CTGAATGACCGTGTTCTCATTAAGGTTG CAGAGGCTGAAGAG AAAACTGCAGGTGGTTTGCTATTGACACAAGCGACCA AAGAAAAGCCTTCTATTGGAACAGTGACAGCCGTAGGCCCAGGACCA TTGGTTGAGGATGGCAGCAGGAAACCCTTGTCAATCACTCCTGGGAATACCGTGATGTACTCCAAGTACGCGGGAAGCGAGT TTAAGGGTGAAGA TGGCGAATATA TTGTTCT CAGGGTATCCGACGTAAT GGCTGTTCTTTCCTAAGCAGACAACGCTCTTGCGAAA TAGGATTTTCT TTAAGAA AA CATGTGAAATAGGAAT TTTGATA TTTAGTCAAAACTTTGTTGCA CTGCTCTTGCTTGGAAATGGTGTATCGCTGCTATTCCTACTTGATGTCACTGCAAAATGCAGAGTTCAATA CAGGACGTGCTCTTTAGACTTTGG ACAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU108868 [ CCAGTTTTCCCAGTTGGTGCCACAAGTTGTCTACTCTAAAATATGCTGNGCACAGAGTTGGAATTCGATGGGTCTGACCANTCTCATTTTGAAAGAAGATGACAT CATT GGTATTCTCGACA CAGATGATGTGAAAGATCTGAAGCCCA CTG ATGACCGTGTTCTCATTAAGGTTG CAGAGGCTGAAGAGAAAAACTGCAGGTGGTTTGCTATTGACACAAGCGACCA AAGAAAAGCCTTCTATTGGAACAGTGACAGCCGTAGGCCCAGGACCA TTGGTTGAGGATGGCAGCAGGAANCCCTTGTCAATCACTCCTGGGAATACCGTGATGTACTCCAAGTACGCGGGAAGCGAGT TTAAGGGTGAAGA TGGCGAATATA TTGTTCT CAGGGTATCCGACGTAAT GGCTGTTCTTTCCTAAGCAGACAACGCTCTTGCGAAA TAGGATTTTCT TTAAGAA AA CATGTGAAATAGGAAT TTTGATA TTTAGTCAAAACTTTGTTGCA CTGCTCTTGCTTGGAAATGGTGTATCGCTGCTATTCCTACTTGATGTCACTGCAAAATGCAGAGTTCAATA CAGGACGTGCTCTTTAGACTTTGG ACAAAAA ]
[+] EMBL BI804690 [ ATTCGATGGGTCTGACCA TCTCATTTTGAAAGAAGATGACAT CATT GGTATTCTCGACA CAGATGATGTGAAAGATCTGAAG CC CTGAATGACCGTGTTCTCATTAAGGTTG CAGAGGCTGAAGAG AAAACTGCAGGTGGTTTGCTATTGACACAAGCGACC AAGAAAAGCCTTCTATTGGAACAGTGACAGCCGTAGGCCCAGGACCA TTGGTTGAGGATGGCAGCAGGAAACCCTTGTCAATCACTCCTGGGAATACCGTGATGTACTCCAAATACGCGGGAAGCGAGT TTAAGGGTGAAGA TGGCGAATATA TTGTTCT CAGGGTATCCGACGTAAT GGCTGTTCTTTCCTAAGCAGAC ACGCTCTTGCGAAA TAGGATTTTCT TTAAGAA AA CATGTGAAATAGGAAT TTTGATA TTTAGTC AAACTTTGTTGCA CTGCTCTTGCTTGGAAATGGTGTATCGCTGCTATTCCTACTTGATGTCACTGC AAATGCAGAGTTCAATA CAGGACGTGCTCTTTAGACTTTGG ACAAAA ]
[+] EMBL BM419194 [ GACCA TCTCATTTTGAAAGAAGATGACAT CATT GGTATTCTCGACA CAGATGATGTGAAAGATCTGAAG CCACCTGAATGACCGTGTTCTCATTAAGGTTGCCAGAGGCTGAAGAG AAAACTGCAGGTGGTTTGCTATTGACACAAGCGACCACAAGAAAAGCCTTCTATTGGAACAGTGACAGCCGTAGGCCCAGGACCACTTGGTTGAGGATGGCAGCAGGAAACCCTTGTCAATCACTCCTGGGAATACCGTGATGTACTCCAAATACGCGGGAAGCGAGT TTAAGGGTGAAGA TGGCGAATATA TTGTTCTCCAGGGTATCCGACGTAAT GGCTGTTCTTTCCTAAGCAGAC ACGCTCTTGCGAAA TAGGATTTTCT TTAAGAA AACCATGTGAAATAGGAAT TTTGATA TTTAGTC AAACTTTGTTGCACCTGCTCTTGCTTGGAAATGGTGTATCGCTGCTATTCCTACTTGATGTCACTGC AAATGCAGAGTTCAATA CAGGACGTGCTCTTTAGACTTTGGCACAAAA ]
[-] EMBL CB966987 [ CCA TCTCATTTTGAAAGAAGATGACAT CATT GGTATTCTCGACA CAGATGATGTGAAAGATCTGAAG CCA CTGAATGACCGTGTTCTCA ]
[+] EMBL BI810006 [ AAGATGACATCCATTGGGTATTCTCGACACCAGATGATGTGAAAGATCTGAA CCA CTGAATGACCGTGTTCTCATTAAGGTTG CAGAGGCTGAAGAG AAAACTGCAGGTGGTTTGCTATTGACACAAGCGACC AAGAAAA CCTTCTATTGGAACAGTGACAGCCGTAGGCCCAGGACCACTTGGTTGAGGATGGCAGCAGGAAACCCTTGTCAATCACTCCTGGGAATACCGTGATGTACTCCAA TACGCGGGAAGCGAGT TTAAGGGTGAAGA TGGCGAATATA TTGTTCT CAGGGTATCCGACGTAAT GCTGTTCTTTCCTAA CAGAC ACGCTCTTGCGAAA TAGGATTTTCT TTAAGAA AA CATGTGAAATAGGAAT TTTGATA TTTAGTC AAACTTTGTTGCA CTGCTCTTGCTTGGAAATGGTGTATCGCTGCTATTCCTACTTGATGTCACTGC AAATGCAGAGTTCAATACCAGGACGTGCTCTTTAGACTTTGG ACATAAAAAAAAAA ]
[+] EMBL AU096529 [ TGGGAATNCCGTGATGTACTCCAAGTNCGCGGGAAGCGAGT TTANGGGTGAAGN TGGCGCATATA TTGTTCT CAGGGTATCCGACGTAAT GGNTGTTCTTTCCTAAGCAGACAACGCTCTTGCGAAA TAGGATTTTCT TTAAGAA AA CATGTGAAATAGGAAT TTTGATA TTTAGTCAAAACTTTGTTGCA CTGCTCTTGCTTGGAAATGGTGTATCNCTGCTATTCCTACTTGATGTCACTGCAAAATGCAGAGTTCAATA CAGGACGTGCTCTTTAGACTTTGG ANATAAAAAAAAAAAAAAAAA ]
[+] EMBL BI800568 [ agcCGAGTGTTAAGGGTGAAGAGTGGCGAATATACTTGTTCT CAGGGTATCCGACGTAATGGGCTGTTCTTTCCTAAGCAGACAACGCTCTTGCGAAAGTAGGATTTTCTCTTAAGAAGAA CATGTGAAATAGGAATGTTTGATACTTTAGTCAAAACTTTGTTGCA CTGCTCTTGCTTGGAAATGGTGTATCGCTGCTATTCCTACTTGATGTCACTGC AAATGCAGAGTTCAATA CAGGACGTGCTCTTTAGACTTTGG ACATAAAAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15039#0 ACAACCTCAGTGGAGCTCACCCTTATCCCCCCCAGCTCCAGAACCTTCTCCTCTCTCCTC 60
consensus_15039#1 ------------------------------------------------------------
consensus_15039#0 TCTCGCTCGCTCGCTTCTCGCGGTTGTCGTCGGCGGTAGCGAGCTCATGGCGTCGGTGCA 120
consensus_15039#1 ------------------------------------------------------------
consensus_15039#0 GCTGTCCGCCGGCCCGCGGGTGTCAGTGTCACCGGCGGCGGCGCTGGTGGCGATGCCTTC 180
consensus_15039#1 ------------------------------------------------------------
consensus_15039#0 GGTCGCCGCCGCCGCATCGAGGGGGCGCCGCGGGTACCGGGGGCTCGTCGTGAGGGCCGC 240
consensus_15039#1 ------------------------------------------------------------
consensus_15039#0 CACGGTCGTGTCGCCCAAGTATACTTCTATCAAACCCTTGGGAGATAGGGTGCTTGTGAA 300
consensus_15039#1 ------------------------------------------------------------
consensus_15039#0 GATCAAGACCTCTGATGATAAAACTGTTGGAGGAATATTACTTCCAACATCAGTTCAGTC 360
consensus_15039#1 ------------------------------------------------------------
consensus_15039#0 AAAACCGCAAGGAGGACAAGTTGTAGCAGTTGGAGAGGGGA-GAAGCATGGGCAGCGACA 419
consensus_15039#1 --ACCNGCAAGGAGGCCAAGTTGTANCAGTTGAAAAGGGGAAGAAGCATGG-CAGCGACA 57
* * ********* ********* ****** * ****** ********* ********
consensus_15039#0 GCATAGAGATC-AGTGTTCCAGTTGGTGCACAAGTTGTCTACTCTAAATATGCTGGCACA 478
consensus_15039#1 GCATAGAGATCCAGTGTTCCAGTTGGTGCACAAGTTGTCTACTCTAAATATGCTGGCACA 117
*********** ************************************************
consensus_15039#0 GAGTTGGAATTCGATGGGTCTGACCATCTCATTTTGAAAGAAGATGACATCATTGGTATT 538
consensus_15039#1 GAGTTGNAATTCGATGGGTCTGACCATCTCATTTTGAAAGAAGATGACATCATTGGTATT 177
****** *****************************************************
consensus_15039#0 CTCGACACAGATGATGTGAAAGATCTGAAGCCACTGAATGACCGTGTTCTCATTAAGGTT 598
consensus_15039#1 CTCGACACAGATGATGTGAAAGATCTGAAGCCACTGAATGACCGTGTTCTCATTAAGGTT 237
************************************************************
consensus_15039#0 GCAGAGGCTGAAGAGAAAACTGCAGGTGGTTTGCTATTGACACAAGCGACCAAAGAAAAG 658
consensus_15039#1 GCAGAGGCTGAAGAGAAAACTGCAGGTGGTTTGCTATTGACACAAGCGACCAAAGAAAAG 297
************************************************************
consensus_15039#0 CCTTCTATTGGAACAGTGACAGCCGTAGGCCCAGGACCATTGGTTGAGGATGGCAGCAGG 718
consensus_15039#1 CCTTCTATTGGAACAGTGACAGCCGTAGGCCCAGGACCATTGGTTGAGGATGGCAGCAGG 357
************************************************************
consensus_15039#0 AAACCCTTGTCAATCACTCCTGGGAATACCGTGATGTACTCCAAGTACGCGGGAAGCGAG 778
consensus_15039#1 AAACCCTTGTCAATCACTCCTGGGAATACCGTGATGTACTCCAAGTACGCGGGAAGCGAG 417
************************************************************
consensus_15039#0 TTTAAGGGTGAAGATGGCGAATATATTGTTCTCAGGGTATCCGACGTAATGGCTGTTCTT 838
consensus_15039#1 TTTAAGGGTGAAGATGGCGAATATATTGTTCTCAGGGTATCCGACGTAATGGCTGTTCTT 477
************************************************************
consensus_15039#0 TCCTAAGCAGACAACGCTCTTGCGAAATAGGATTTTCTTTAAGAAAACATGTGAAATAGG 898
consensus_15039#1 TCCTAAGCAGACAACGCTCTTGCGAAATAGGATTTTCTTTAAGAAAACATGTGAAATAGG 537
************************************************************
consensus_15039#0 AATTTTGATATTTAGTCAAAACTTTGTTGCACTGCTCTTGCTTGGAAATGGTGTATCGCT 958
consensus_15039#1 AATTTTGATATTTAGTCAAAACTTTGTTGCACTGCTCTTGCTTGGAAATGGTGTATCGCT 597
************************************************************
consensus_15039#0 GCTATTCCTACTTGATGTCACTGCAAAATGCAGAGTTCAATACAGGACGTGCTCTTTAGA 1018
consensus_15039#1 GCTATTCCTACTTGATGTCACTGCAAA-TGCAGAGTTCAATACAGGACGTGCTCTTTAGA 656
*************************** ********************************
consensus_15039#0 CTTTGGACATATAATAATGCTGTGCTGCT 1047
consensus_15039#1 CTTTGGACAAAAAAAAAAAAAAAAAAAAA 685
********* * ** **
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||