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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15051#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1547 fasta sequence
[ATTTCCGTTTTCTCTCGATTTTCTATATACTTTTGTGTTCTTCTCTTGTGCAATGGATCTATGGCCCAACTATTTGATCCAGCCACAAACCAATGGCAAACTCATCGACAAGGAAGCTTTAGGGAGTGTAGATTTGAGAGACTACAAGCATTTGAGCCTCTTCAGAATGTGAGGTCGGAAGCTGGTGTGACCGAGTACTTTGATGAGACGAATGAATTGTTTCAGTGCACAGGTACATTTGTCATCCGACGTGTTATTCAACCTCAAGGCCTTCTAATACCTCGATACGCCAATACTCCTGGCATGGTCTACATCATCCAAGGAAGAGGTTCTATGGGTCTAACCTTCCCTGGATGCCCCGCAACTTACCAGCAGCAATCCCAACAGTTTTTGTTTCAAGGCGAAAGTCAGAGCCAAAAGTTTATAGATGAGCACCAAAAGATTCATCAATTTAGGCAAGGTGATATCGTTGTACTCCCAACAGGTGTTGCACATTGGTTCTACAATGATGGTGACACGCCTGTTGTTGCCCTATATGTTTATGACATAAACAATAGCGCTAATCAACTTGAACCAAGGCATAGGGAGTTCTTATTGGCTGGTAAGAACAATAGGGTACAACAAGTGTATGGTCGCTCAATTCAGCAACACTCTGGGCAAAACATATTCAATGGATTCAGTGTTGAGCCACTAAGTGAGGCTTTAAACATCAACACAGTAACAACAAAGAGGCTACAAAGCCAAAATGACCAAAGAGGAGAGATCATACATGTAAAGAATGGCCTTCAATTGCTGAAACCAACTTTGACACAACGACAAGAACAAGAACAAGCTCAATACCAAGAAGTCCAATATAGTGAAAAACCACAAACATCT--TCCCGATGGAACGGTTTAG-AGGAGAACTTGTGCAC-AATCAAGACGAGGTTAAACATTGAAAA-TCCAAGTCGTGCTGATTCATACGATCCACGTGCTGGAAGGATCACAAGTCTTGATAGTCAGAAGTTCCCTATCCTTAATATCATCCAAATGAGTGCTACTAGAGTAAATCTATACCAGAATGCTATTCTCACACCATTCTGGAATGTAAATG-CTCATAGTTTGATGTATGTGATT-CAAGGGCGTGCTCAAGTTCAAGTCGTCAGTAACCTTGGAAAGACTGTGTTCGATGGTGTTCTTCGTCCAGAACAA-CTATTGATTATTCCACAAAACTATGTTGTCT-T-AAAGAA-AGCACAACATG-A-AGGAT-GCCAATATA-T-TGC-AATCAACA-C-AACGCTAATGCCTTTGTGAGCCACC-TTGCAGGG-GTAGACTCAGTATTCCGTGCCTTAC-CAGTTGATGTT-GTT-GCTAATGCGTATCGCATCTCAAGGGAAGAGGCTCGAAGA-CTCAAGAACAA-CA-GGGGAGACGAGTATGGTCCATTCCCTCCCAGATT-AC-AACAACAAATCTACCCAGAATT-CTCGAATGAATCTAAAGGCGAGACTTCAGAGTAATGTAACTAAGATCTAATATTAGGAAA-G-C-AAATAAAGGGGTAA-TTGGATCCAAAAAAAAAAAAAAAA]
[+] EMBL AY429651 [ATTTCCGTTTTCTCTCGATTTTCTATATACTTTTGTGTTCTTCTCTTGTGCAATGGATCTATGGCCCAACTATTTGATCCAGCCACAAACCAATGGCAAACTCATCGACAAGGAAGCTTTAGGGAGTGTAGATTTGAGAGACTACAAGCATTTGAGCCTCTTCAGAATGTGAGGTCGGAAGCTGGTGTGACCGAGTACTTTGATGAGACGAATGAATTGTTTCAGTGCACAGGTACATTTGTCATCCGACGTGTTATTCAACCTCAAGGCCTTCTAATACCTCGATACGCCAATACTCCTGGCATGGTCTACATCATCCAAGGAAGAGGTTCTATGGGTCTAACCTTCCCTGGATGCCCCGCAACTTACCAGCAGCAATCCCAACAGTTTTTGTTTCAAGGCGAAAGTCAGAGCCAAAAGTTTATAGATGAGCACCAAAAGATTCATCAATTTAGGCAAGGTGATATCGTTGTACTCCCAACAGGTGTTGCACATTGGTTCTACAATGATGGTGACACGCCTGTTGTTGCCCTATATGTTTATGACATAAACAATAGCGCTAATCAACTTGAACCAAGGCATAGGGAGTTCTTATTGGCTGGTAAGAACAATAGGGTACAACAAGTGTATGGTCGCTCAATTCAGCAACACTCTGGGCAAAACATATTCAATGGATTCAGTGTTGAGCCACTAAGTGAGGCTTTAAACATCAACACAGTAACAACAAAGAGGCTACAAAGCCAAAATGACCAAAGAGGAGAGATCATACATGTAAAGAATGGCCTTCAATTGCTGAAACCAACTTTGACACAACGACAAGAACAAGAACAAGCTCAATACCAAGAAGTCCAATATAGTGAAAAACCACAAACATCT TCCCGATGGAACGGTTTAG AGGAGAACTTGTGCAC AATCAAGACGAGGTTAAACATTGAAAA TCCAAGTCGTGCTGATTCATACGATCCACGTGCTGGAAGGATCACAAGTCTTGATAGTCAGAAATTCCCTATCCTTAATATCATCCAAATGAGTGCTACTAGAGTAAATCTATACCAGAATGCTATTCTCACACCATTCTGGAATGTAAATG CTCATAGTTTGATGTATGTGATT CGAGGGCGTGCTCGAGTCCAAGTCGTCAGTAACTTTGGAAAGACTGTGTTCGACGGTGTTCTTCGTCCAGAACAA CTATTGATTATTCCACAAAACTATGTTGTCT T AAAGAA AGCACAACATG A AGGAT GCCAATATA T TGC AATCAACA CAAACGCTAATGCCTTCGTGAGCCACC TTGCAGGG GTAGACTCAGTATTCCATGCCTTAC CAGTTGATGTT ATC GCTAATGCGTATTGCATCTCAAGGGAAGAGGCTCGAAGA CTCAAGAACAA CA GGGGAGACGAGTATGGTCCATTCCCTCCTAGATT AC AACAACAAATCTACCCAGAATT CTCGAATGAATCTAAAGGCGAGACTTCAGAGTAATGTAACTAAGATCTAA ]
[+] EMBL AA750683 [ATTTCCGTTTTCTCTCGATTTTCTATATACTTTTGTGTTCTTCTCTTGTGCAATGGATCTATGGCCCAACTATTTGATCCAGCCACAAACCAATGGCAAACTCATCGACAAGGAAGCTTTAGGGAGTGTAGATTTGAGAGACTAC AGCATTTGAGCCTCTTCAGAATGTGAGGTCGGAAGCTGGTGTGACCGAGTACTTTGATGAGACGAATGAATTGTTTCAG ]
[+] EMBL AA749634 [ ACACGAACAAGAACAAGCTCAATACCAAGAAGTCCAATTTAGTGAAAAACCACAAACTTCT TCCCGATGGAACGGTTTAG AGGAGAACTTGTGCAC AATCAAGACAAG ]
[+] EMBL BI796944 [ tgAAACCCCCAACATGTTGTCCGGATGG ACCGTTTAGAAGGAGAACTTGGGCACAAATCAAGACCAGGTTAAAC TTGAAAAGTCCAACTCGT CTGATTCATACGATCCACGTGCTGGAAGGATCACAAGTCTTGATA TCAGAAGTTCCCTATCCGTAATATCATCC AATGAGTGCTACTAGAGTAAATCTATACCAGAATGCTATTCTCACACCATTCTGGAATGTAAATG CTCATAGTTTGATGTATGTGATT CAAGGGCGTGCTCAAGTTCAAGTCGTCAGTAACCTTGGAAAGACTGTGTTCGATGGTGTTCTTCGTCCAGAACAA CTATTGATTATTCCAC AAACTATGTTGTCT T AAAGAA AGCACAACATG A AGGAT GCCAATATA T TGC AATCAACA C AACGCTAATGCCTTTGTGAGCCACC TTGCAGGG GTAGACTCAGTATTCCGTGCCTTAC CAGTTGATGTT GTT GCTAATGCGTATCGCATCTCAAGGGAAGAGGCTCGAAGA CTCAAGAACAC CA GGGGAGACGAGTATGGTCCATTCCCTCCCAGATT AC AACAACAAATCTACCCAGAATT CTCGAATGAATCTAAAGGCGAGACTTCAGAGTAATGTAACTAAGATCTAATATTAGGAAA G C AAATAAAGGGGTAA TTGGATCCATGTCAAAAAAA ]
[+] EMBL BI798816 [ ATAGTCAGAAGTTCC A CC TAATATCA CC AATGAGTGCTACTAGAGTAAATCTATACCAGAATGCTATTCTCACACCATTCTGGAATGTAAATGCCTCATAGTTTGATGTATGTGATT CAAGGGCGTGCTCAAGTTCAAGTCGTCAGTGACCTTGGAAAGACTGTGTTCGATGGTGTTCTTCGTCCAGAACAA CTATTGATTATTCCAC AAACTATGTTGTCT T AAAGAA AGCAC ACATG A AGGAT GCCAATATA T TGC AATCAACA C AACGCTAATGCCTTTGTGAGCCACC TTGCAGGG GTAGACTCAGTATTCCGT CCTTAC CAGTTGATGTT GTT GCTAATGCGTATCGCATCTCAAGGGAAGAGGCTCGAAGA CTCAAG ACAA CA GGGAGACGAGTAT GTCCATTCCCTCCCAGA T AC AC AC AATCTACCCAG ATT CTCG ATG ATCTAA GCGAGACTTCAGAGT ATGT ACT AGATCT ATA TAG AA C AAATAAggtcatga c ]
[+] EMBL BI799692 [ CCTATCCTTAATATCATCCAAATGAGTGCTACTAGAGTAAATCTATACCAGAATGCTATTCTCACACCATTCTGGAATGTAAATG CTCATAGTTTGATGTATGTGATT CAAGGGCGTGCTCAAGTTCAAGTCGTCAGTAACCTTGGAAAGACTGTGTTCGATGGTGTTCTTCGTCCAGAACAACCTATTGATTATTCCACAAAACTATGTTGTCT T AAAGAA AGCACAACATG A AGGAT GCCAATATA T TGC AATCAACA C AACGCTAATGCCTTTGTGAGCCACC TTGCAGGG GTAGACTCAGTATTCCGTGCCTTAC CAGTTGATGTT GTT GCTAATGCGTATCGCATCTCAAGGGAAGAGGCTCGAAGA CTCAAGAAC A CA GGGGAGACGAGTATGGTCCATTCCCTCCCAGATT AC AACAACAAATCTACCCAGAATTCCTCGAATGAATCTAAAGGCGAGACTTCAGAGTAATGTAACTAAGATCTAATATTAGGAAA C AAATAAAGGGGTAA TTGGATCCAAA ]
[+] EMBL BI798343 [ CAAATGAGTGCTACTAGAGTAAATCTATACCAGAATGCTATTCTCACACCATTCTGGAATGTAAATG CTCATAGTTTGATGTATGTGATT CAAGGGCGTGCTCAAGTTCAAGTCGTCAGTAACCTTGGAAAGACTGTGTTCGATGGTGTTCTTCGTCCAGAACAA CTATTGATTATTCCACAAAACTATGTTGTCT T AAAGAA AGCACAACATG A AGGAT GCCAATATA T TGC AATCAACA CAAACGCTAATGCCTTTGTGAGCCACC TTGCAGGG GTAGACTCAGTATTCCGTGCCTTAC CAGTTGATGTT GTT GCTAATGCGTATCGCATCTCAAGGGAAGAGGCTCGAAGA CTCAAGAACAACCA GGGGAGACGAGTATGGTCCATTCCCTCCCAGATT AC AACAACAAATCTACCCAGAATT CTCGAATGAATCTAAAGGCGAGACTTCAGAGTAATGTAACTAAGATCTAATATTAGGAAA G C AAATAAAGGGGTAA TTGGATCAAAA ]
[+] EMBL BI799035 [ AAATGAGTGCTACTAGAGTAAATCTATACCAGAATGCTATTCTCACACCATTCTGGAATGTAAATG CTCATAGTTTGATGTATGTGATTCCAAGGGCGTGCTCAAGTTCAAGTCGTCAGTAACCTTGGAAAGACTGTGTTCGATGGTGTTCTTCGTCCAGAACAA CTATTGATTATTCCACAAAACTATGTTGTCT T AAAGAA AGCACAACATG A AGGAT GCC ATATA T TGC AATCAACACC AACGCTAATGCCTTTGTGAGCCCCC TTGCAGGG GTAGACTCAGTATTCCGTGCCTTAC CAGTTGATGTT GTT GCTAATGCGTATCGCATCTCAAGGGAAGAGGCTCGAAGA CTCAAGAACCA CACGGGGAGACGAGTATGGTCCATTCCCTCCCAGATT AC AACAAC AATCTACCCAGAATT CTCGAATGAATCTAAAGGCGAGACTTCAGAGTAATGTAACTAAGATCTAATATTAGGAAA GCC AAATAAAGGGGTAA TTGGATCCAAAAAAAAAA ]
[+] EMBL BI799146 [ TGATTACAAGGGCGTGCTCAAGTTCAAGTCGTCAGTAACCTGGGAAAGACTGTGTTCGATGGTGTTCTTCGTCCAGAACAA CTATTGATTATTCCACAACACTATGTTGTCTCTCAAAGAACAGCACAACATGTATAGGATCGCCAATATACTGTGC AATCAACA C AACGTTAATGCCTTTGTGAGCCACC TTCCAGGGTGTAGACTCAGTATTCCGTGCCTTAC CAGTTGATGTTCCTTCGCTAATGCGTATCGCATCTCAAGGGAAGAGGCTCGAAGATCTCAAGAACAA CA GGGGAGACGAGTATGCTCCATTCCCTCCCAGATTGAC ACAAC AATCTACCCAGAATT CTCGAATGAAT TAAAGGCGAGACTTCAGAGTAATGTAACTAAGATCTAATATTAGGAAA G CAAAATAAAGGGGTAA TTGGATCAAAA ]
[+] EMBL BI796270 [ ACATG A AGGATGGCCAATATA T TGCAAATCAACA C TACGCTAATGCCTTTGTGAGCCACCTTTGCAGGG GTAGACTCAGTATTCCGTGCCTTACACAGTTGATGTT GTT GCTAATGCGTATCGCATCTCAAGGGAAGAGGCTCGAAGA CTCAAGAACAA CA GGGGAGACGAGTATGGTCCATTCCCTCCCAGATT ACAAACAACAAATCTACCCAGAATT CTCGAATGAATCTAAAGGCGAGACTTCAGAGTAATGTAACTAAGATCTAATATTAGGAAACG CAAAATAAAGGGGTAATTTGGATCCAAAA ]
[+] EMBL CA763872 [ acaagggGTAATGTAACTAAGATCTAATATTAGGAAA G CAAAATAAAGGGGTAA TTGGATCCAAAAAAAAAAAAAAAA]
consensusID : consensus_15051#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 648 fasta sequence
[CATCCAATGAGTGCTACCTAGAGTAAATCTATACCAGAATGCTATTCTCACACCATTCTGGAATGTAAATGCTCATAGTTTGATGTATGTGATTCAAGGGCGTGCTCAAGTTCAAGTCGTCAGTAACCTTGGAAAGACTGTGTTCGATGGTGTTCTTCGTCCAGAACAACTATTGATTATTCCACCAAACTATGTTGTCTTAAAGAAAGCACAACATGAAGGATGCCAATATATTGCAATCAACACAAACGCTAATGCCTTTGTGAGCCA-CCTTGCAGGGGTAGACTCAGTATTCCGTGCCTTACCAGTTGATGTT-GTTGCTAATGCGTATCGCATCTCAAGGGAAGAGGCTCGAAGACT-CAAGAACAA-CAGGGGAGACGAGTATGGTCCATTCCCTCCCAGATTACAACAACAAATCTACCCAGAATTCTCGAATGAATCTAAAGGCGAGACTTCAGAGTAATGTAACTAAGATCTAATATTAGGAAAGCAAAATAAAGGGGTAATTGGATCCATGTCA-TTGCGAAAAATGTCGATTAAGATAATTGTCATTACCATTCGTCT----GTATTCATCTCAAAAGAAATCATTGTCACTGTCACGTTTTCCATCATCATATAGACCAAAATACCCCAAACGTGGGACCCACAT]
[+] EMBL BI796723 [CATCCAATGAGTGCTACCTAGAGTAAATCTATACCAGAATGCTATTCTCACACCATTCTGGAATGTAAATGCTCATAGTTTGATGTATGTGATTCAAGGGCGTGCTCAAGTTCAAGTCGTCAGTAACCTTGGAAAGACTGTGTTCGATGGTGTTCTTCGTCCAGAACAACTATTGATTATTCCACCAAACTATGTTGTCTTAAAGAAAGCACAACATGAAGGATGCCAATATATTGCAATCAACACAAACGCTAATGCCTTTGTGAGCCA CCTTGCAGGGGTAGACTCAGTATTCCGTGCCTTACCAGTTGATGTT GTTGCTAATGCGTATCGCATCTCAAGGGAAGAGGCTCGAAGACT CAAGAACAA CAGGGGAGACGAGTATGGTCCATTCCCTCCCAGATTACAACAACAAATCTACCCAGAATTCTCGAATGAATCTAAAGGCGAGACTTCAGAGTAATGTAACTAAGATCGAATATTAGGAAAGCAAAATAAAGGGGTAATTGGATCCATGTCATTTGCGAAAAA ]
[+] EMBL BI796757 [ TCACACCATTCTGGAATGTAAATGCTCATAGTTTGATGTATGTGATTCAAGGGCGTGCTCAAGTTCAA TCGTCAGTAACCTTGGAAAGACTGTGTTCGATGGTGTTCTTCGTCCAGAACAACTATTGATTATTCCACCAAACTATGTTGTCTTAAAGAAAGCACAACATGAAGGATGCCCATATATTGCAATCAACAC AACGCTAATGCCTTTGTGACCAA CCTTGCAGGGGTAGACTCAGTATTCCGTGCCTTACCAGTTGATGTTGGTTGCTAATGCGTATCGCATCTCAAGGGAAGAGGCTCGAAGACT CAAGAACAA CAGGGGAGACGAGTATGGTCCATTCCCTCCCAGATTACAAC ACAAATCTACCCAGAATTCTCGAATGAATCTAAAGGCGAGACTTCAGAGTAATGTAACTAAGATCTAATATTAGGAAAGCAAAATAAAGGGGTAATTGGATCCATGTCA TTGCGAAAAATGTCGATTAAGATAATTGTCATTACCATTCGTCT GTATTCATCTCAAAA ]
[+] EMBL BI796140 [ CTTTGTGAGCCACCCTTGCAGGGGTAGACTCAGTATTCCGT CCTTACCAGTTGATGTT GTTGCTAATGCGTATCGCATCTCAAGGGAAGAGGCTCGAAGACT CAAGAACAACCAGGGGAGACGAGTATGGTCCATTCCCTCCCAGATTAC ACAAC AATCTACCCAGAATTCTCGAATGAATCTAAAGGCGAGACTTCAGAGTAATGTAACTAAGATCTAATATTAGGAAAGC AAATAAAGGGGTAATTGGATCCATGTCAaaaaaa ]
[+] EMBL AA749630 [ TGCAGGGGTAGACTCAGTATTCCNTNCCTTACCAGTTGATGTT GTTGCTAATGCGTAT CAGCTCAAGGGAAGAGGCTCGAAGACTACAAGAACAA CAGGGGAGACGAGTATGGTCCATTCCCTCCCAGATTACAACAACAAATC ]
[+] EMBL CB096916 [ GTATTCCGTGCCTTACCAGTTGATGTT GTTGCTAATGCGTATTGCATCTCAAGGGAAGAGGCTCGAAGACT CAAGAACAA CAGGGGAGACGAGTATGGTCCATTCCCTCCCAGATTACAACAACAAATCTACCCAGAATTCTCGAGTGAATCTAAAGGCGAGACTTCAGGGTAATGTAACTAAGATCTAATATTAGGAAAGCAAAATAAAGGGGTAATTGGATCCATGTCA TTGCGAAAAATGTCGATTAAGATAATT ]
[+] EMBL CA766631 [ CTAAGATCTAATATTAGGAAAGCAAAATAAAGGGGTAATTGGATCCATGTCA TTGCGAAAAATGTCGATTAAGATAATTGTCATTACAATTCGTCTGTCCGTATTCATCTCATTCGAAATCATTGTCACTGTCACGTTTTCCATCATCATATAGACCAAAATACCCCAAACGTGGGACCCACAT]
consensusID : consensus_15051#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 548 fasta sequence
[ATGNGGTAATGGNGTAATTAAACCNGATGTATTNTCACACCATTTGGGANGTAATGNTCATAGTTTGAGTATGTGATTCAAGGNGTGNTCAAGTCAAGTGTCAGTAACCTTGGAAAGACTGTGTTCGATGTNTTCTTTCGTCCAGAACAANTATTGATTATTCCACAAAANTATGTTGTCTTAAAGAAAGCACAACATGAAGGATGCCAATATATTGCAATCAACACAAACGCTAATGCCTTTGTGAGCCACCTTGCAGGGGTAGACTCAGTATTCCGTGCCTTACCAGTTGATGTTGTTGCTAATGCGTATCGCATCTCAAGGGAAGAGGCTCGAAGACTCAAGAACAACAGGGGAGACGAGTATGGTCCATTCCCTCCCAGATTACAACAACAAATCTACCCAGAATTCTCGAATGAATCTAAAGGCGAGACTTCAGAGTAATGTAACTAAGATCTAATATTAGGAAAGCAAAATAAAGGGGTAATTGGATCCATGTCATTGCGAAAAATGTCGATTAAGATAATTGTCATTACAAAAAAAAAAAA]
[-] EMBL AA753754 [ATGNGGTAATGGNGTAATTAAACCNGATGTATTNTCACACCATTTGGGANGTAATGNTCATAGTTTGAGTATGTGATTCAAGGNGTGNTCAAGTCAAGTGTCAGTAACCTTGGAAAGACTGTGTTCGATGTNTTCTTTCGTCCAGAACAANTATTGATTATTCCACAAAANTATGTTGTCTTAAAGAAAGCACAACATGAAGGATGCCAATATATTGCAATCAACACAAACGCTAATGCCTTTGTGAGCCACCTTGCAGGGGTAGACTCAGTATTCCGTGCCTTACCAGTTGATGTTGTTGCTAATGCGTATCGCATCTCAAGGGAAGAGGCTCGAAGACTCAAGAACAACAGGGGAGACGAGTATGGTCCATTCCCTCCCAGATTACAACAACAAATCTACCCAGAATTCTCGAATGAATCTAAAGGCGAGACTTCAGAGTAATGTAACTAAGATCTAATATTAGGAAAGCAAAATAAAGGGGTAATTGGATCCATGTCATTGCGAAAAATGTCGATTAAGATAATTGTCATTACAAAAAAAAAAAA]
consensusID : consensus_15051#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 370 fasta sequence
[GGAAAGCACACCATGGAAGGGATGGCCATGATGATTGCCATGCAACACAACGCTGAATCCTTTGTGACCACCTTGCAGGGGTAGACTCAGTATTCCGTGCCCTTGACCAGTTGGATGTGTGTTGGCTAATGCGTATCGCATCTCAAGGGAAGAGGCTGCGAAGACTGCAAGAACCACAGGGGAGACAGAGTATGGTGCCATTGCCCTGCCCAGATGTGACAACAACAAATGCTACCCAGAATTCTCGAATGAATTAAAGGCGAGACTTCAGAGTAATGTAACTAAGATCTAATATTAGGAAACCAAATAAAGGGGTAATTGGATCCATGTCATTGCGAAAAATGTCGATTAAGATAATTGTCATTAAAAA]
[+] EMBL BI795200 [GGAAAGCACACCATGGAAGGGATGGCCATGATGATTGCCATGCAACACAACGCTGAATCCTTTGTGACCACCTTGCAGGGGTAGACTCAGTATTCCGTGCCCTTGACCAGTTGGATGTGTGTTGGCTAATGCGTATCGCATCTCAAGGGAAGAGGCTGCGAAGACTGCAAGAACCACAGGGGAGACAGAGTATGGTGCCATTGCCCTGCCCAGATGTGACAACAACAAATGCTACCCAGAATTCTCGAATGAATTAAAGGCGAGACTTCAGAGTAATGTAACTAAGATCTAATATTAGGAAACCAAATAAAGGGGTAATTGGATCCATGTCATTGCGAAAAATGTCGATTAAGATAATTGTCATTAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15051#1 ------------------------------------------------------------
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 ATTTCCGTTTTCTCTCGATTTTCTATATACTTTTGTGTTCTTCTCTTGTGCAATGGATCT 60
consensus_15051#1 ------------------------------------------------------------
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 ATGGCCCAACTATTTGATCCAGCCACAAACCAATGGCAAACTCATCGACAAGGAAGCTTT 120
consensus_15051#1 ------------------------------------------------------------
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 AGGGAGTGTAGATTTGAGAGACTACAAGCATTTGAGCCTCTTCAGAATGTGAGGTCGGAA 180
consensus_15051#1 ------------------------------------------------------------
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 GCTGGTGTGACCGAGTACTTTGATGAGACGAATGAATTGTTTCAGTGCACAGGTACATTT 240
consensus_15051#1 ------------------------------------------------------------
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 GTCATCCGACGTGTTATTCAACCTCAAGGCCTTCTAATACCTCGATACGCCAATACTCCT 300
consensus_15051#1 ------------------------------------------------------------
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 GGCATGGTCTACATCATCCAAGGAAGAGGTTCTATGGGTCTAACCTTCCCTGGATGCCCC 360
consensus_15051#1 ------------------------------------------------------------
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 GCAACTTACCAGCAGCAATCCCAACAGTTTTTGTTTCAAGGCGAAAGTCAGAGCCAAAAG 420
consensus_15051#1 ------------------------------------------------------------
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 TTTATAGATGAGCACCAAAAGATTCATCAATTTAGGCAAGGTGATATCGTTGTACTCCCA 480
consensus_15051#1 ------------------------------------------------------------
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 ACAGGTGTTGCACATTGGTTCTACAATGATGGTGACACGCCTGTTGTTGCCCTATATGTT 540
consensus_15051#1 ------------------------------------------------------------
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 TATGACATAAACAATAGCGCTAATCAACTTGAACCAAGGCATAGGGAGTTCTTATTGGCT 600
consensus_15051#1 ------------------------------------------------------------
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 GGTAAGAACAATAGGGTACAACAAGTGTATGGTCGCTCAATTCAGCAACACTCTGGGCAA 660
consensus_15051#1 ------------------------------------------------------------
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 AACATATTCAATGGATTCAGTGTTGAGCCACTAAGTGAGGCTTTAAACATCAACACAGTA 720
consensus_15051#1 ------------------------------------------------------------
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 ACAACAAAGAGGCTACAAAGCCAAAATGACCAAAGAGGAGAGATCATACATGTAAAGAAT 780
consensus_15051#1 ------------------------------------------------------------
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 GGCCTTCAATTGCTGAAACCAACTTTGACACAACGACAAGAACAAGAACAAGCTCAATAC 840
consensus_15051#1 ------------------------------------------------------------
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 CAAGAAGTCCAATATAGTGAAAAACCACAAACATCTTCCCGATGGAACGGTTTAGAGGAG 900
consensus_15051#1 ------------------------------------------------------------
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 AACTTGTGCACAATCAAGACGAGGTTAAACATTGAAAATCCAAGTCGTGCTGATTCATAC 960
consensus_15051#1 -----------------------------------------------------------C 1
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 GATCCACGTGCTGGAAGGATCACAAGTCTTGATAGTCAGAAGTTCCCTATCCTTAATATC 1020
consensus_15051#1 ATCCAATGAGTGCTACCTAGAGTAAATCTATACCAGAATGCTATTCTCACACCATTCTGG 61
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ----------ATGNGGTAATGGNGTAATTAAACCNGAT--GTATTNTCACACCATTTGGG 48
consensus_15051#0 ATCCAAATGAGTGCTACTAGAGTAAATCTATACCAGAATGCTATTCTCACACCATTCTGG 1080
consensus_15051#1 AATGTAAATGCTCATAGTTTGATGTATGTGATTCAAGGGCGTGCTCAAGTTCAAGTCGTC 121
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ANGT--AATGNTCATAGTTTGA-GTATGTGATTCAAGGN-GTGNTCAAGTCAAG--TGTC 102
consensus_15051#0 AATGTAAATGCTCATAGTTTGATGTATGTGATTCAAGGGCGTGCTCAAGTTCAAGTCGTC 1140
consensus_15051#1 AGTAACCTTGGAAAGACTGTGTTCGATGGTGTTCTTCGTCCAGAACAACTATTGATTATT 181
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 AGTAACCTTGGAAAGACTGTGTTCGATGTNTTCTTTCGTCCAGAACAANTATTGATTATT 162
consensus_15051#0 AGTAACCTTGGAAAGACTGTGTTCGATGGTGTTCTTCGTCCAGAACAACTATTGATTATT 1200
consensus_15051#1 CCACCAAACTATGTTGTCTTAAAGAAAGCACAACATGAA--GGATGCCAATAT--ATTGC 237
consensus_15051#3 ----------------------GGAAAGCACACCATGGAAGGGATGGCCATGATGATTGC 38
consensus_15051#2 CCACAAAANTATGTTGTCTTAAAGAAAGCACAACATGAA--GGATGCCAATAT--ATTGC 218
consensus_15051#0 CCACAAAACTATGTTGTCTTAAAGAAAGCACAACATGAA--GGATGCCAATAT--ATTGC 1256
********* **** * ***** * ** *****
consensus_15051#1 AAT-CAACACAAACGCTAATGCCTTTGTGAGCCACCTTGCAGGGGTAGACTCAGTATTCC 296
consensus_15051#3 CATGCAACACAA-CGCTGAATCCTTTGTGA-CCACCTTGCAGGGGTAGACTCAGTATTCC 96
consensus_15051#2 AAT-CAACACAAACGCTAATGCCTTTGTGAGCCACCTTGCAGGGGTAGACTCAGTATTCC 277
consensus_15051#0 AAT-CAACACAA-CGCTAATGCCTTTGTGAGCCACCTTGCAGGGGTAGACTCAGTATTCC 1314
** ******** **** * ********* *****************************
consensus_15051#1 GTGCCTT--ACCAGTTG-ATGT-TGTTG-CTAATGCGTATCGCATCTCAAGGGAAGAGGC 351
consensus_15051#3 GTGCCCTTGACCAGTTGGATGTGTGTTGGCTAATGCGTATCGCATCTCAAGGGAAGAGGC 156
consensus_15051#2 GTGCCTT--ACCAGTTG-ATGT-TGTTG-CTAATGCGTATCGCATCTCAAGGGAAGAGGC 332
consensus_15051#0 GTGCCTT--ACCAGTTG-ATGT-TGTTG-CTAATGCGTATCGCATCTCAAGGGAAGAGGC 1369
***** * ******** **** ***** *******************************
consensus_15051#1 T-CGAAGACT-CAAGAACAACAGGGGAGAC-GAGTATGGT-CCATT--CCCTCCCAGATT 405
consensus_15051#3 TGCGAAGACTGCAAGAACCACAGGGGAGACAGAGTATGGTGCCATTGCCCTGCCCAGATG 216
consensus_15051#2 T-CGAAGACT-CAAGAACAACAGGGGAGAC-GAGTATGGT-CCATT--CCCTCCCAGATT 386
consensus_15051#0 T-CGAAGACT-CAAGAACAACAGGGGAGAC-GAGTATGGT-CCATT--CCCTCCCAGATT 1423
* ******** ******* *********** ********* ***** ** *******
consensus_15051#1 --ACAACAACAAAT-CTACCCAGAATTCTCGAATGAATCTAAAGGCGAGACTTCAGAGTA 462
consensus_15051#3 TGACAACAACAAATGCTACCCAGAATTCTCGAATGAAT-TAAAGGCGAGACTTCAGAGTA 275
consensus_15051#2 --ACAACAACAAAT-CTACCCAGAATTCTCGAATGAATCTAAAGGCGAGACTTCAGAGTA 443
consensus_15051#0 --ACAACAACAAAT-CTACCCAGAATTCTCGAATGAATCTAAAGGCGAGACTTCAGAGTA 1480
************ *********************** *********************
consensus_15051#1 ATGTAACTAAGATCTAATATTAGGAAAGCAAAATAAAGGGGTAATTGGATCCATGTCATT 522
consensus_15051#3 ATGTAACTAAGATCTAATATTAGGAAACCAAA-TAAAGGGGTAATTGGATCCATGTCATT 334
consensus_15051#2 ATGTAACTAAGATCTAATATTAGGAAAGCAAAATAAAGGGGTAATTGGATCCATGTCATT 503
consensus_15051#0 ATGTAACTAAGATCTAATATTAGGAAAGCAAA-TAAAGGGGTAATTGGATCCAAAAAAAA 1539
*************************** **** ******************** *
consensus_15051#1 GCGAAAAATGTCGATTAAGATAATTGTCATTACCATTCGTCTGTATTCATCTCAAAAGAA 582
consensus_15051#3 GCGAAAAATGTCGATTAAGATAATTGTCATTAAAAA------------------------ 370
consensus_15051#2 GCGAAAAATGTCGATTAAGATAATTGTCATTACAAAAAAAAAAAA--------------- 548
consensus_15051#0 AAAAAAAA---------------------------------------------------- 1547
*****
consensus_15051#1 ATCATTGTCACTGTCACGTTTTCCATCATCATATAGACCAAAATACCCCAAACGTGGGAC 642
consensus_15051#3 ------------------------------------------------------------
consensus_15051#2 ------------------------------------------------------------
consensus_15051#0 ------------------------------------------------------------
consensus_15051#1 CCACAT 648
consensus_15051#3 ------
consensus_15051#2 ------
consensus_15051#0 ------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||