These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15054#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1544 fasta sequence [TTGTTATCCACATTTGCGGGGCGCAGCAGCAAAAGCACAAGGGCAAAGCCTCGCCGCCGTCGCCGCCGCCGCCGCCGCCGCCGCCGCGGCGA-T-CGCCACGCCATGTCTCCCTCCCTCTTGCTTACCTCTAGGGGTACCCACTCGCCGGCGCCACGGCCGCAAACCCGTCGAGCATCACAACTGCTCGTCTCTTTCCCCTCGCGCTGCAGCCGCTTCGTCGGCCTCCGCCTCGCGCGCGCAGCCGCCG-ATTCGCAGGGGCCCAACGGCGCTGCCCCTGGATCTGGATCTGGTGGGGACGGAGAGGGCAAGGCAGCCAATGGTGCCGACACCAAATTGCCAAAGAACCGGAGGGACATACTCCTGGAATACGTTAAAAATGTCCAGCCAGAGTTTATGGAGCTCTTCATAAAAAGAGCTCCGCCACAGGTTGTTGATGCCATGCGCCAAACGGTGACTAATAT-GATTGGGACTCTGCCACCTCAATTTTTCGCTGTAACTGTGACAACGGTTGCTGAAAATCTAGCTCAGCTTATGTACAGTGTTCTGATGACCGGATACATGTTCAGGAATGCGCAGTATCGTCTGGAATTGCAACAGAGTTTGGAGCAGATTGCCCTTCCAGAACCAAAAGAAGAAAATGATTCTGCAGATTATGCTCCTGGAACCCAGAAAAAGGTTACT-GGAGAAGTTATCCGATGGAACAAGACTACTGGTCCTGAGAAAATTGATGCAGTAAAATATATAGAATTGCTTGAAGCAGAAATTGATGAACTCAGCCATCAAGTTGCTAGAAAATCATCTCAAGGAAGTAATGAACTCTTGGAATATCTAAAAACTCTAGAACCTCAAAATCTGAAGGAGCTGGCAAGTAGTGCCGGCGAGGATGTCGTTTTTGCTATGAATGCATTCATAAAGCGCCTTTTGGCTGTCTCAGATCCTGCACAGATGAAGACAACAGTTTCAGAAACAAGTGCTAATCAGCTAGCCAACTTGATGTTTTGGTTGATGATTGTTGGCTACAGCATGCGCAATATTGAAGTGCGGTTTGACATGGAAAGAGTATTGGGTGCTGCCCCAAAGATAGGGGAATTACCACCTGGAGAAAACATATAGCAGGGAGGAAAGGGGC-GTAAGAGTGGGGAAGTGATGATTAGTTAAAATCTAGGGTTACTGGCCGGCCAAGATAACTGTATTTGCGTGGTCATATTATTTTGAGTGGAATGGATTACAGCATTTGTGCAAAGACA-CCAATCCACATTTTGGGAACTAAGATGAGATGCTAGGCATAGCCATTTCTGATATATTTCTCGGGGAGGTATAGACGACGAGATACATAGAAACAATAGAACGGGACCTGATGCTGTAGTTTTGCAA-CCTGACTATTGTTGGTAAAAT-ACAAT-CAAGGCAACT-CATATT-ACCATATTGTACT-CCCATGTTGTATG-TCTAGTT-CA-CCAATC--AAGTTGAG-TCTGATGTGAGTTTGTTTAAAAAAAAAACTAATTTTGCTACAAGACACATAAGTTTGTGTAATTTGATAGCGTACATCG] [+] EMBL AK073112 [TTGTTATCCACATTTGCGGGGCGCAGCAGCAAAAGCACAAGGGCAAAGCCTCGCCGCCGTCGCCGCCGCCGCCGCCGCCGCCGCCGCGGCGA T CGCCACGCCATGTCTCCCTCCCTCTTGCTTACCTCTAGGGGTACCCACTCGCCGGCGCCACGGCCGCAAACCCGTCGAGCATCACAACTGCTCGTCTCTTTCCCCTCGCGCTGCAGCCGCTTCGTCGGCCTCCGCCTCGCGCGCGCAGCCGCCG ATTCGCAGGGGCCCAACGGCGCTGCCCCTGGATCTGGATCTGGTGGGGACGGAGAGGGCAAGGCAGCCAATGGTGCCGACACCAAATTGCCAAAGAACCGGAGGGACATACTCCTGGAATACGTTAAAAATGTCCAGCCAGAGTTTATGGAGCTCTTCATAAAAAGAGCTCCGCCACAGGTTGTTGATGCCATGCGCCAAACGGTGACTAATAT GATTGGGACTCTGCCACCTCAATTTTTCGCTGTAACTGTGACAACGGTTGCTGAAAATCTAGCTCAGCTTATGTACAGTGTTCTGATGACCGGATACATGTTCAGGAATGCGCAGTATCGTCTGGAATTGCAACAGAGTTTGGAGCAGATTGCCCTTCCAGAACCAAAAGAAGAAAATGATTCTGCAGATTATGCTCCTGGAACCCAGAAAAAGGTTACT GGAGAAGTTATCCGATGGAACAAGACTACTGGTCCTGAGAAAATTGATGCAGTAAAATATATAGAATTGCTTGAAGCAGAAATTGATGAGCTCAGCCATCAAGTTGCTAGAAAATCATCTCAAGGAAGTAATGAACTCTTGGAATATCTAAAAACTCTAGAACCTCAAAATCTGAAGGAGCTGGCAAGTAGTGCCGGCGAGGATGTCGTTTTTGCTATGAATGCATTCATAAAGCGCCTTTTGGCTGTCTCAGATCCTGCACAGATGAAGACAACAGTTTCAGAAACAAGTGCTAATCAGCTAGCCAACTTGATGTTTTGGTTGATGATTGTTGGCTACAGCATGCGCAATATTGAAGTGCGGTTTGACATGGAAAGAGTATTGGGTGCTGCCCCAAAGATAGGGGAATTACCACCTGGAGAAAACATATAGCAGGGAGGAAAGGGGC GTAAGAGTGGGGAAGTGATGATTAGTTAAAATCTAGGGTTACTGGCCGGCCAAGATAACTGTATTTGCGTGGTCATATTATTTTGAGTGGAATGGATTACAGCATTTGTGCAAAGACA CCAATCCACATTTTGGGAACTAAGATGAGATGCTAGGCATAGCCATTTCTGATATATTTCTCGGGGAGGTATAGACGACGAGATACATAGAAACAATAGAACGGGACCTGATGCTGTAGTTTTGCAA CCTGACTATTGTTGGTAAAAT ACAAT CAAGGCAAC ] [+] EMBL CB625776 [ GCGGGGCGCAGCAGCAAAAGCACAAGGGCAAAGCCTCGCCGCCGT CGCCGCCGCCGCCGCCGCCGCGGCGA T CGCCACGCCATGTCTCCCTCCCTCTTGCTTACCTCTAGGGGTACCCACTCGCCGGCGCCACGGCCGCAAACCCGTCGAGCATCACAACTGCTCGTCTCTTTCCCCTCGCGCCGCAGCCGCTTCGTCGGCCTCCGCCTCGCGCGCGCAGCCGCCG ATTCGCAGGGGCCCAACGGCGCTGCCCCTGGATCTGGATCTGGTGGGGACGGAGAGGGCAAGGCAGCCAATGGTGCCGACACCAAATTGCCAAAGAACCGGAGGGACATACTCCTGGAATACGTTAAAAATGTCCAGCCAGAGTTTATGGAGCTCTTCATAAAAAGAGCTCCGCCACAGGTTGTTGATGCCATGCGCCAAACGGTGACTAATAT GATTGGGACTCTGCCACCTCAATTTTTCGCTGTAACTGTGACAACGGTTGCTGAAAATCTAGCTCAGCTTATGTACAGTGTTCTGATGACCGGATACATGTTCAGGAATGCGCAGTATCGTCTGGAATTGCAACAGAGTTTGGAGCAGATTGCCCTTCCAGAACCAAAAGAAGAAAATGATTCTGCAGATTATGCTCCTGGAACCCAGAAAAAGGTTACT GGAGAAGTTATCCGATGGAACAAGACTACTGGTCCTGAGAAAATTGATGCAGTAAAATATATAGAATTGCTTGAAGCAGAAATTGATGAACTCAGCCATCAAGTTGCTAGAAAATCATCTCAAGGAAGTAATGAACTCTT ] [+] EMBL CB677755 [ CGCCGACGCCGCCGCCGCCGCCGCCGCCGCCGCGGCGA T CGCCACGCCATGGCTCCCTCCCTCTTGCTTACCTCTAGGGGTACCCACTCGCCGGCGCCACGGCCGCAAACCCGTCGAGCATCACAACTGCTCGTCTCTTTCCCCTCGCGCTGCAGCCGCTTCGTCGGCCTCCGCCTCGCGCGCGCAGCCGCCG ATTCGCAGGGGCCCAACGGCGCTGCCCCTGGATCTGGATCTGGTGGGGACGGAGAGGGCAAGGCAGCCAATGGTGCCGACACCAAATTGCCAAAGAACCGGAGGGACATACTCCTGGAATACGTTAAAAATGTCCAGCCAGAGTTTATGGAGCTCTTCATAAAAAGAGCTCCGCCACAGGTTGTTGATGCCATGCGCCAAACGGTGACTAATAT GATTGGGACTCTGCCACCTCAATTTTTCGCTGTAACTGTGACAACGGTTGCTGAAAATCTAGCTCAGCTTATGTACAGTGTTCTGATGACCGGATACATGTTCAGGAATGCGCAGTATCGTCTGGAATTGCAACAGAGTTTGGAGCAGATTGCCCTTCCAGAACCAAAAGAAGAAAATGATTCTGCAGATTATGCTCCTGGAACCCAGAAAAAGGTTACTGGGAGAA ] [+] EMBL AU173460 [ GCCGTCGCCGCCGCCGCCGCCGCCGCCGCCGCGGCGA T CGCCACGCCATGTCTCCCTCCCTCTTGCTTACCTCTAGGGGTACCCACTCGCCGGCGCCACGGCCGCAAACCCGTCGAGCATCACAACTGCTCGTCTCTTTCCCCTCGCGCTGCAGCCGCTTCGTCGGCCTCCGCCTCGCGCGCGCAGCCGCCG ATTCGCAGGGGCCCAACGGCGCTGCCCCTGGATCTGGATCTGGTGGGGACGGAGAGGGCAAGGCAGCCAATGGTGCCGACACCAAATTGCCAAAGAACCGGAGGGACATACTCCTGGAATACGTTAAAAATGTCCAGCCAGAGTTTATGGAGCTNTTCATAAAAAGAGCTCCGNCACAGGTTGCTGATGCCATGCGCCAAACGGTGACTAATATNGATTGGGACTCTGCCACCTCAATTTTTNGCTGTAA ] [+] EMBL OSR29131A [ GCCGTCGCCGCCGCCGCCGCCGCCGCCGCCGCG GA T CGCCACGCCATGTCTCCCTCCCTCTTGCTTACCTCTAGGGGTACCCACTCGCCGGCGCCACGGCCGCAAACCCGTCGAGCATCACAACTGCTCGTCTCTTTCCCCTCGCGCTGCAGCCGCTTCGTCGGCCTCCGCCTCGCGCGCGCAG CGCCGAATTCGCAGGGGCCCAACGGCGCTGCCCCTGGATCTGGATCTGGTGGGGACGG ] [+] EMBL OSR27951A [ GCCGTCGCCGCCGCCGCCGCCGCCGCCGCCGCGG GANTACGCCACGCCATGTCTCCCTCCCTCTTGCTTACCTCTAGGGGTACCCACTCGCCGNCGNCACGGCCGCAAACCCGTCGAGCATCACAACTGCTCGTCTNTTTCCCCTCGAGCTGCANCCGNTTCGTCGGCCTCCNCCTCGNGCGCa ] [+] EMBL CB652773 [ GCCGCCGCCGCCGCGGCGA T CGCCACGCCATGTCTCCCTCCCTCTTGCTTACCTCTAGGGGTACCCACTCGCCGGCGCCACGGCCGCAAACCCGTCGAGCATCACAACTGCTCGTCTCTTTCCCCTCGCGCTGCAGCCGCTTCGTCGGCCTCCGCCTCGCGCGCGCAGCCGCCG ATTCGCAGGGGCCCAACGGCGCTGCCCCTGGATCTGGATCTGGTGGGGACGGAGAGGGCAAGGCAGCCAATGGTGCCGACACCAAATTGCCAAAGAACCGGAGGGACATACTCCTGGAATACGTTAAAAATGTCCAGCCAGAGTTTATGGAGCTCTTCATAAAAAGAGCTCCGCCACAGGTTGTTGATGCCATGCGCCAAACGGTGACTAATAT GATTGGGACTCTGCCACCTCAATTTTTCGCTGTAACTGTGACAACGGTTGCTGAAAATCTAGCTCAGCTTATGTACAGTGTTCTGATGACCGGATACATGTTCAGGAATGCGCAGTATCGTCTGGAATTGCAACAGAGTTTGGAGCAGATTGCCCTTCCAGAACCAAAAGAAGAAAATGATTCTGCAGATTATGCTCCTGGAACCCAGAAAAAGGTTACT GGAGAAGTTATCCGATGGAACAAGACTACTGGTCCTGAGAAAATTGATGCAGTAAAATATATAGAATTGCTTGAAGCAGAAATTGATGAACTCAGCCATCCAGTTGCTAGA ] [+] EMBL CB652805 [ GCCGCCCCTGCAGCGGCGA T CGCCACGCCATGTCTCCCTCCCTCTTGCTTACCTCTAGGGGTACCCACTCGCCGGCGCCACGGCCGCAAACCCGTCGAGCATCACAACTGCTCGTCTCTTTCCCCTCGCGCTGCAGCCGCTTCGTCGGCCTCCGCCTCGCGCGCGCAGCCGCCG ATTCGCAGGGGCCCAACGGCGCTGCCCCTGGATCTGGATCTGGTGGGGACGGAGAGGGCAAGGCAGCCAATGGTGCCGACACCAAATTGCCAAAGAACCGGAGGGACATACTCCTGGAATACGTTAAAAATGTCCAGCCAGAGTTTATGGAGCTCTTCATAAAAAGAGCTCCGCCACAGGTTGTTGATGCCATGCGCCAAACGGTGACTAATAT GATTGGGACTCTGCCACCTCAATTTTTCGCTGTAACTGTGACAACGGTTGCTGAAAATCTAGCTCAGCTTATGTACAGTGTTCTGATGACCGGATACATGTTCAGGAATGCGCAGTATCGTCTGGAATTGCAACAGAGTTTGGAGCAGATTGCCCTTCCAGAACCAAAAGAAGAAAATGATTCTGCAGATTATGCTCCTGGAACCCAGAAAAAGGTTACT GGAGAAGTTATCCGATGGAACAAGACTACTGGTCCTGAGAAAATTGATGCAGTAAAATATATAGAATTGCTTGAAGCAGAAATTGATGAACTCAGCCATCAAGTTGCTAGAAAATCATCTCAAGGAAGTAATGAACTCTTGGAATATC ] [+] EMBL AK063696 [ CCATGTCTCCCTCCCTCTTGCTTACCTCTAGGGGTACCCACTCGCCGGCGCCACGGCCGCAAACCCGTCGAGCATCACAACTGCTCGTCTCTTTCCCCTCGCGCTGCAGCCGCTTCGTCGGCCTCCGCCTCGCGCGCGCAGCCGCCG ATTCGCAGGGGCCCAACGGCGCTGCCCCTGGATCTGGATCTGGTGGGGACGGAGAGGGCAAGGCAGCCAATGGTGCCGACACCAAATTGCCAAAGAACCGGAGGGACATACTCCTGGAATACGTTAAAAATGTCCAGCCAGAGTTTATGGAGCTCTTCATAAAAAGAGCTCCGCCACAGGTTGTTGATGCCATGCGCCAAACGGTGACTAATAT GATTGGGACTCTGCCACCTCAATTTTTCGCTGTAACTGTGACAACGGTTGCTGAAAATCTAGCTCAGCTTATGTACAGTGTTCTGATGACCGGATACATGTTCAGGAATGCGCAGTATCGTCTGGAATTGCAACAGAGTTTGGAGCAGATTGCCC ] [-] EMBL CB625777 [ ATGATTCTGCAGATTATGCTCCTGGAACCCAGAAAAAGGTTACT GGAGAAGTTATCCGATGGAACAAGACTACTGGTCCTGAGAAAATTGATGCAGTAAAATATATAGAATTGCTTGAAGCAGAAATTGATGAACTCAGCCATCAAGTTGCTAGAAAATCATCTCAAGGAAGTAATGAACTCTTGGAATATCTAAAAACTCTAGAACCTCAAAATCTGAAGGAGCTGGCAAGTAGTGCCGGCGAGGATGTCGTTTTTGCTATGAATGCATTCATAAAGCGCCTTTTGGCTGTCTCAGATCCTGCACAGATGAAGACAACAGTTTCAGAAACAAGTGCTAATCAGCTAGCCAACTTGATGTTTTGGTTGATGATTGTTGGCTACAGCATGCGCAATATTGAAGTACGGTTTGACATGGAAAGAGTATTGGGTGCTGCCCCAAAGATAGGGGAATTACCACCTGGAGAAAACATATAGCAGGGAGGAAAGGGGCTGTAAGAGTGGGGAAGTGATGATTAGTCAAAATCTAGGGTTACTGGCCGGCCAAGATAACTGTATTTGCGTGGTCATATTATTTTGAGTGGAATGGATTACAGCATTTGTGCAAAGACA CCAATCCACATTTTGGGAACTAAGATGAGATGCTAGGCATAGCCATTTCTGATATATTTCTCGGGGAGGTATAGACGACGAGATACATAGAAACAATAGAACGGGACCTGATGCTGTAGTTTTGCAA CCTGACTATTGTTGGTAAAAT ACAAT CAAGGCAACT CATATT ACCAaaaaaaaga ] [-] EMBL CB634079 [ TCTGCAGATTATGCTCCTGGAACCCAGAAAAAGGTTACT GGAGAAGTTATCCGATGGAACAAGACTACTGGTCCTGAGAAAATTGATGCAGTAAAATATATAGAATTGCTTGAAGCAGAAATTGATGAACTCAGCCATCAAGTTGCTAGAAAATCATCTCAAGGAAGTAATGAACTCTTGGAATATCTAAAAACTCTAGAACCTCAAAATCTGAAGGAGCTGGCAAGTAGTGCCGGCGAGGATGTCGTTTTTGCTATGAATGCATTCATAAAGCGCCTTTTGGCTGTCTCAGATCCTGCACAGATGAAGACAACAGTTTCAGAAACAAGTGCTAATCAGCTAGCCAACTTGATGTTTTGGTTGATGATTGTTGGCTACAGCATGCGCAATATTGAAGTACGGTTTGACATGGAAAGAGTATTGGGTGCTGCCCCAAAGATAGGGGAATTACCACCTGGAGAAAACATATAGCAGGGAGGAAAGGGGCTGTAAGAGTGGGGAAGTGATGATTAGTCAAAATCTAGGGTTACTGGCCGGCCAAGATAACTGTATTTGCGTGGTCATATTATTTTGAGTGGAATGGATTACAGCATTTGTGCAAAGACA CCAATCCACATTTTGGGAACTAAGATGAGATGCTAGGCATAGCCATTTCTGATATATTTCTCGGGGAGGTATAGACGACGAGATACATAGAAACAATAGAACGGGACCTGATGCTGTAGTTTTGCAA CCTGACTATTGTTGGTAAAAT ACAAT CAAGGCAACT CATATT ACCATATTGTACT CCCATGTTGTATG TCTAGT ] [-] EMBL CB634113 [ GTTACT GGAGAAGTTATCCGATGGAACAAGACTACTGGTCCTGAGAAAATTGATGCAGTAAAATATATAGAATTGCTTGAAGCAGAAATTGATGAACTCAGCCATCAAGTTGCTAGAAAATCATCTCAAGGAAGTAATGAACTCTTGGAATATCTAAAAACTCTAGAACCTCAAAATCTGAAGGAGCTGGCAAGTAGTGCCGGCGAGGATGTCGTTTTTGCTATGAATGCATTCATAAAGCGCCTTTTGGCTGTCTCAGATCCTGCACAGATGAAGACAACAGTTTCAGAAACAAGTGCTAATCAGCTAGCCAACTTGATGTTTTGGTTGATGATTGTTGGCTACAGCATGCGCAATATTGAAGTACGGTTTGACATGGAAAGAGTATTGGGTGCTGCCCCAAAGATAGGGGAATTACCCCCTGGAGAAAACATATAGCAGGGAGGAAAGGGGCTGTAAGAGTGGGGAAGTGATGATTAGTCAAAATCTAGGGTTACTGGCCGGCCAAGATAACTGTATTTGCGTGGTCATATTATTTTGAGTGGAATGGATTACAGCATTTGTGCAAAGACA CCAATCCACATTTTGGGAACTAAGATGAGATGCTAGGCATAGCCATTTCTGATATATTTCTCGGGGAGGTATAGACGACGAGATACATAGAAACAATAGAACGGGACCTGATGCTGTAGTTTTGCAA CCTGACTATTGTTGGTAAAAT ACAAT CAAGGCAACT CATATT ACCATATGGTACT CCCATGTTGTATG TCTAGTT CA CCAAT ] [-] EMBL CB677756 [ GAACCTCAAAATCTGAAGGAGCTGGCAAGTAGTGCCGGCGAGGATGTCGTTTTTGCTATGAATGCATTCATAAAGCGCCTTTTGGCTGTCTCAGATCCTGCACAGATGAAGACAACAGTTTCAGAAACAAGTGCTAATCAGCTAGCCAACTTGATGTTTTGGTTGATGATTGTTGGCTACAGCATGCGCAATATTGAAGTGCGGTTTGACATGGAAAGAGTATTGGGTGCTGCCCCAAAGATAGGGGAATTACCACCTGGAGAAAACATATAGCAGGGAGGAAAGGGGC GTAAGAGTGGGGAAGTGATGATTAGTTAAAATCTAGGGTTACTGGCCGGCCAAGATAACTGTATTTGCGTGGTCATATTATTTTGAGTGGAATGGATTACAGCATTTGTGCAAAGACA CCAATCCACATTTTGGGAACTAAGATGAGATGCTAGGCATAGCCATTTCTGATATATTTCTCGGGGAGGTATAGACGACGAGATACATAGAAACAATAGAACGGGACCTGATGCTGTAGTTTTGCAA CCTGACTATTGTTGGTAAAAT ACAAT CAAGGCAACT CATATT ACCATATTGTACT CCCATGTGGTATG TCTAGTT CA CCAATC AAGTTGAG TCTGATGTGAGTTTGTTTAGAATCTTGACTAATTTTGCTACAAGACACATAAGTTTGTGTAATTTGATAGCGTACATCG] [+] EMBL AK105388 [ AAGGAGCTGGCAAGTAGTGCCGGCGAGGATGTCGTTTTTGCTATGAATGCATTCATAAAGCGCCTTTTGGCTGTCTCAGATCCTGCACAGATGAAGACAACAGTTTCAGAAACAAGTGCTAATCAGCTAGCCAACTTGATGTTTTGGTTGATGATTGTTGGCTACAGCATGCGCAATATTGAAGTGCGGTTTGACATGGAAAGAGTATTGGGTGCTGCCCCAAAGATAGGGGAATTACCACCTGGAGAAAACATATAGCAGGGAGGAAAGGGGC GTAAGAGTGGGGAAGTGATGATTAGTTAAAATCTAGGGTTACTGGCCGGCCAAGATAACTGTATTTGCGTGGTCATATTATTTTGAGTGGAATGGATTACAGCATTTGTGCAAAGACA CCAATCCACATTTTGGGAACTAAGATGAGATGCTAGGCATAGCCATTTCTGATATATTTCTCGGGGAGGTATAGACGACGAGATACATAGAAACAATAGAACGGGACCTGATGCTGTAGTTTTGCAA CCTGACTATTGTTGGTAAAAT ACAAT CAAGGCAACT CATATT ACCATATTGTACT CCCATGTTGTATG TCTAGTT CA CCAATC AAGTTGAG TCTGATGT ] [+] EMBL AU184553 [ ATTGGGTGCTGCCCCAAAGATAGGGGAATTACCACCTGGAGAAAACATATAGCAGGGAGGAAAGGGGC GTAAGAGTGGGGAAGTGATGATTAGTTAAAATCTAGGGTTACTGGCCGGCCAAGATAACTGTATTTGCGTGGTCATATTATTTTGAGTGGAATGGATTACAGCATTTGTGCAAAGACA CCAATCCACATTTTGGGAACTAAGATGAGATGCTAGGCATAGCCATTTNTGATATATTTCTCGGGGAGGTATAGACGACGAGATACATAGAAACAATAGAACGGGACCTGATGCTGTAGTTTTGCAA CCTGACTATTGTTGGTAAAAT ACAAT CAAGGCAACT CATATT ACCATATTGTACT CCCATGTTGTATG TCTAGTT CA CCAATC AAGTTGAG TCTGATGTGAGTTTGTTTAAAAAAAAAA ] [+] EMBL AU173400 [ AGATAGGGGAATTACCNCCTGGAGAAAACATATAGCAGGGAGGAAAGGGGC GTAAGAGTGGGGAAGTGATGATTAGTTAAAATCTAGGGTTACTGGCCGGCCAAGATAACTGTATTTGCGTGGTCATATTATTTTGAGTGGAATGGATTACAGCATTTGTGCAAAGACACCCAATCCCCATTTTGGGAACTAAGATGAGATGCTAGGCATAGCCATTTCTGATATATTTCTCGGGGAGGTATAGACGGCGAGATACATAGAAACAATAGAACGGGGCCTGATGCTGTAGTTTTGCAACCCTGACTATTGTTGGTAAAATNCCAATCCAAGGCAACTCCATATTNCCCATATTGNACTCCCCATGTTGTATGTTCTAGTTCCACCCAATCCAAAGTTGAGTTCTNATGNGAGNTTGNTTNAAAAAAAAA ] [+] EMBL AU173461 [ TTATTTTGAGTGGAATGGATTNCAGCATTTGTGCAAAGACA CCAATCCNCATTTTGGGAANTAAGATGAGATGCTAGGCATAGCCATTTCTGATATATTTCTCGGGGAGGTATAGACGACGAGATACATAGAAACAATAGAACGGGACCTGATGCTGTAGTTTTGCAA CCTGACTATTGTTGGTAAAAT ACAAT CAAGGCAACT CATATT ACCATATTGTACT CCCATGTTGTATG TCTAGTT CA CCAATC AAGTTGAG TCTGATGTGAGTTTGTTTAAAAAAAAAA ] consensusID : consensus_15054#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 836 fasta sequence [CGTCGCCGCCGCCGCCGCCGCCGCGGCGATCGCCACGCCATGTCTCCCTCCCTCTTGCTTACCTCTAGGGGTACCCACTCGCCGGCGCCACGGCCGCAAACCCGTCGAGCATCACAACTGCTCGTCTCTTTCCCCTCGCGCCGCAGCCGCTTCGTCGGCCTCCGCCTCGCGCGCGCAGCCGCCGATTCGCAGGGGCCCAACGGCGCTGCCCCTGGATCTGGATCTGGTGGGGACGGAGAGGGCAAGGCAGCCAATGGTGCCGACACCAAATTGAACATTTGGGAATGGTAACAGGACATGGAGGTTGATCCTATACCAAGACACCATGTATATATACATATATAAATGATACACCACCAACTGCAATTCTATCAGTCGGTTTCATCTGAATTACACTGTGCAATGAATAGATATATCATATGTATGACTCATCATGCTCACATTTTTTCTCCATTAGTGGGCCGCTTGTTAATAATATATAAGTTGATGAAATATTGTTAACTCTCACTGATCCATGGCATCAATGATCTGTCTAATACTGCACGAGCGACTGTTGTCTGTTGCTAGGGCAGCTGGTAGTCAATGGATTGTTCACTCTCCACAAAACATGTTGAGTTGAGGGCTTTTATGATATCTTGCCTTTGTTGATCTGTTCCTACACAAAACAACTTGAAGGTCCTATATGTAAGAAAATTAGCAAGGATTGCTTGACAATTGTTGATAGCCTTATAGCTCAGGGCAGAAAGTTCTGGCAGAACCTTATATTCAAGAAAATTAGCAAGGATCTCTTGACAATCTTTGATAGACTTATCGCTCAGAGCAGAAAGTTCTAGCAC] [+] EMBL CB634112 [CGTCGCCGCCGCCGCCGCCGCCGCGGCGATCGCCACGCCATGTCTCCCTCCCTCTTGCTTACCTCTAGGGGTACCCACTCGCCGGCGCCACGGCCGCAAACCCGTCGAGCATCACAACTGCTCGTCTCTTTCCCCTCGCGCCGCAGCCGCTTCGTCGGCCTCCGCCTCGCGCGCGCAGCCGCCGATTCGCAGGGGCCCAACGGCGCTGCCCCTGGATCTGGATCTGGTGGGGACGGAGAGGGCAAGGCAGCCAATGGTGCCGACACCAAATTGAACATTTGGGAATGGTAACAGGACATGGAGGTTGATCCTATACCAAGACACCATGTATATATACATATATAAATGATACACCACCAACTGCAATTCTATCAGTCGGTTTCATCTGAATTACACTGTGCAATGAATAGATATATCATATGTATGACTCATCATGCTCACATTTTTTCTCCATTAGTGGGCCGCTTGTTAATAATATATAAGTTGATGAAATATTGTTAACTCTCACTGATCCATGGCATCAATGATCTGTCTAATACTGCACGAGCGACTGTTGTCTGTTGCTAGGGCAGCTGGTAGTCAATGGATTGTTCACTCTCCACAAAACATGTTGAGTTGAGGGCTTTTATGATATCTTGCCTTTGTTGATCTGTTCCTACACAAAACAACTTGAAGGTCCTATATGTAAGAAAATTAGCAAGGATTGCTTGACAATTGTTGATAGCCTTATAGCTCAGGGCAGAAAGTTCTGGCAGAACCTTATATTCAAGAAAATTAGCAAGGATCTCTTGACAATCTTTGATAGACTTATCGCTCAGAGCAGAAAGTTCTAGCAC] [+] EMBL CB634078 [CGTCGCCGCCGCCGCCGCCGCCGCGGCGATCGCCACGCCATGTCTCCCTCCCTCTTGCTTACCTCTAGGGGTACCCACTCGCCGGCGCCACGGCCGCAAACCCGTCGAGCATCACAACTGCTCGTCTCTTTCCCCTCGCGCCGCAGCCGCTTCGTCGGCCTCCGCCTCGCGCGCGCAGCCGCCGATTCGCAGGGGCCCAACGGCGCTGCCCCTGGATCTGGATCTGGTGGGGACGGAGAGGGCAAGGCAGCCAATGGTGCCGACACCAAATTGAACATTTGGGAATGGTAACAGGACATGGAGGTTGATCCTATACCAAGACACCATGTATATATACATATATAAATGATACACCACCAACTGCAATTCTATCAGTCGGTTTCATCTGAATTACACTGTGCAATGAATAGATATATCATATGTATGACTCATCATGCTCACATTTTTTCTCCATTAGTGGGCCGCTTGTTAATAATATATAAGTTGATGAAATATTGTTAACTCTCACTGATCCATGGCATCAATGATCTGTCTAATACTGCACGAGCGACTGTTGTCTGTTGCTAGGGCAGCTGGTAGTCAATGGATTGTTCACTCTCCACAAAACATGTTGAGTTGAGGGCTTTTATGATATCTTGCCTTTGTTGATCTGTTCCTACACAAAACAACTTGAAGGTCCTATATGTAAGAAAATTAGCAAGGATTGCTTGACAATTGTTGATAGCCTTATAGCTCAGGGCAGAAAGTTCTGGCAGAACCTTATATTCAAGAGAATTAGCAAGGATCTCTTGACAATCTTTGATAGA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15054#0 TTGTTATCCACATTTGCGGGGCGCAGCAGCAAAAGCACAAGGGCAAAGCCTCGCCGCCGT 60 consensus_15054#1 ------------------------------------------------------------ consensus_15054#0 CGCCGCCGCCGCCGCCGCCGCCGCCGCGGCGATCGCCACGCCATGTCTCCCTCCCTCTTG 120 consensus_15054#1 ---CGTCGCCGCCGCCGCCGCCGCCGCGGCGATCGCCACGCCATGTCTCCCTCCCTCTTG 57 ** ****************************************************** consensus_15054#0 CTTACCTCTAGGGGTACCCACTCGCCGGCGCCACGGCCGCAAACCCGTCGAGCATCACAA 180 consensus_15054#1 CTTACCTCTAGGGGTACCCACTCGCCGGCGCCACGGCCGCAAACCCGTCGAGCATCACAA 117 ************************************************************ consensus_15054#0 CTGCTCGTCTCTTTCCCCTCGCGCTGCAGCCGCTTCGTCGGCCTCCGCCTCGCGCGCGCA 240 consensus_15054#1 CTGCTCGTCTCTTTCCCCTCGCGCCGCAGCCGCTTCGTCGGCCTCCGCCTCGCGCGCGCA 177 ************************ *********************************** consensus_15054#0 GCCGCCGATTCGCAGGGGCCCAACGGCGCTGCCCCTGGATCTGGATCTGGTGGGGACGGA 300 consensus_15054#1 GCCGCCGATTCGCAGGGGCCCAACGGCGCTGCCCCTGGATCTGGATCTGGTGGGGACGGA 237 ************************************************************ consensus_15054#0 GAGGGCAAGGCAGCCAATGGTGCCGACACCAAATTGCCAAAGAACCGGAGGGACATACTC 360 consensus_15054#1 GAGGGCAAGGCAGCCAATGGTGCCGACACCAAATTG---AACATTTGGGAATGGTAACAG 294 ************************************ ** * ** ** consensus_15054#0 CTGGAATACGTTAAAAATGTCCAGCCAGAGTTTATGGAGCTCTTCATAAAAAGA-GCTCC 419 consensus_15054#1 GACATGGAGGTTGATCCTAT--ACCAAGACACCATGTATATATACATATATAAATGATAC 352 * *** * * * * * *** *** * * * **** * * * * * * consensus_15054#0 GCCACAGGTTGTTGATGCCATGCGCCAAACGGTGACTAATATGATTGGGACTCTGCCACC 479 consensus_15054#1 ACCACCAACTGC-AATTCTAT----CAGTCGGT--TTCATCTGAATTACACTGTGCAATG 405 **** ** ** * ** ** **** * ** *** * *** *** * consensus_15054#0 TCAATTTTTCGCTGTAACTGTGACAACGGTTGCTGAAAATCTAGCTCAGCTTATGTACAG 539 consensus_15054#1 AATAGATAT-ATCATATGTATGACTCATCATGCTCACATTTTTTCTCCATTAGTGGGCCG 464 * * * ** * **** **** * * * * *** * ** * * consensus_15054#0 TGTTCTGATGACCGGATACATGTTCAGGAATGCGCAGTATCGTCTGGAATTGCAACAGAG 599 consensus_15054#1 CTTGTTAATAAT---ATATAAGTTGATGAA------ATATTGTT--AACTCTCACTGATC 513 * * ** * *** * *** * *** *** ** * * ** consensus_15054#0 TTTGGAGCAGATTGCCCTTCCAGAACCAAAAGAAGAAAATGATTCTGCAGATTATGCTCC 659 consensus_15054#1 CATGGCATCAATGATCTGTCTAATACTGCACGAGCGA-------CTGTTG--TCTGTTGC 564 *** ** * ** * ** * ** * *** * * ** * * consensus_15054#0 TGGAACCCAGAAAAAGGTTACTGGAGAAGTTATCCGATGGAACAAGACTACTGGTCCTGA 719 consensus_15054#1 TAGGG--CAGCTGGTAGTCAATGGATTGTTCACTCTCC---ACAAAACATGTTGAGTTGA 619 * * *** ** * **** * * * **** ** * * *** consensus_15054#0 GAAAATTGATGCAGTAAAATATATAGAATTGCTTGAAGCAGAAATTGATGAACTCAGCCA 779 consensus_15054#1 GGGCTTTTATG-------ATATCTTGCCTTT------------GTTGATCTGTTCCTACA 660 * ** *** **** * * ** ***** ** ** consensus_15054#0 TCAAGTTGCTAGAAAATCATCTCAAGGAAGTAATGAACTCTTGGAATATCTAAAAACTCT 839 consensus_15054#1 CAAAACAACTTGAAGGTCCTATATGTAAGAAAATTAGCA--AGGATTGCTTGACAATTGT 718 ** ** *** ** * * * *** * * *** * * * ** * * consensus_15054#0 AGA-ACCTCAAAATCTGAAGGAGCTGGCAAGTAGTGCCGGCGAGGATGTCGTTTTTGCTA 898 consensus_15054#1 TGATAGCCTTATAGCTCAGGG------CAGAAAGTTCTGGC-AGAACCTTATATTC---- 767 ** * * * * ** * ** ** *** * *** ** * * * ** consensus_15054#0 TGAATGCATTCATAAAGCGCCTTTTGGCTGTCTCAGATCC-TGCACAGATGAAGACAACA 957 consensus_15054#1 --AAGAAAATTAGCAAGGATCTCTTGACAATCTTTGATAGACTTATCGCTCAGAGCAGAA 825 ** * * * *** ** *** * *** *** * * * * ** * consensus_15054#0 GTTTCAGAAACAAGTGCTAATCAGCTAGCCAACTTGATGTTTTGGTTGATGATTGTTGGC 1017 consensus_15054#1 AGTTCTAGCAC------------------------------------------------- 836 *** ** consensus_15054#0 TACAGCATGCGCAATATTGAAGTGCGGTTTGACATGGAAAGAGTATTGGGTGCTGCCCCA 1077 consensus_15054#1 ------------------------------------------------------------ consensus_15054#0 AAGATAGGGGAATTACCACCTGGAGAAAACATATAGCAGGGAGGAAAGGGGCGTAAGAGT 1137 consensus_15054#1 ------------------------------------------------------------ consensus_15054#0 GGGGAAGTGATGATTAGTTAAAATCTAGGGTTACTGGCCGGCCAAGATAACTGTATTTGC 1197 consensus_15054#1 ------------------------------------------------------------ consensus_15054#0 GTGGTCATATTATTTTGAGTGGAATGGATTACAGCATTTGTGCAAAGACACCAATCCACA 1257 consensus_15054#1 ------------------------------------------------------------ consensus_15054#0 TTTTGGGAACTAAGATGAGATGCTAGGCATAGCCATTTCTGATATATTTCTCGGGGAGGT 1317 consensus_15054#1 ------------------------------------------------------------ consensus_15054#0 ATAGACGACGAGATACATAGAAACAATAGAACGGGACCTGATGCTGTAGTTTTGCAACCT 1377 consensus_15054#1 ------------------------------------------------------------ consensus_15054#0 GACTATTGTTGGTAAAATACAATCAAGGCAACTCATATTACCATATTGTACTCCCATGTT 1437 consensus_15054#1 ------------------------------------------------------------ consensus_15054#0 GTATGTCTAGTTCACCAATCAAGTTGAGTCTGATGTGAGTTTGTTTAAAAAAAAAACTAA 1497 consensus_15054#1 ------------------------------------------------------------ consensus_15054#0 TTTTGCTACAAGACACATAAGTTTGTGTAATTTGATAGCGTACATCG 1544 consensus_15054#1 ----------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||