Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1506 cluster # 1506       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1506#0 length = 808 sequences # 2  

consensusID : consensus_1506#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 808
fasta sequence
                              [GATCATCGCCGTGCTGTACACCACGGCGCAGGTCACGCGCGACGTTCACCGGCTCAGCTGGGGACGGGACGTCATCGCGGGGAGGAAGGCGGCGGCCGTCGTTGACTTCGCCGGAGATCAGGTCGTCGCTTACCTGTTGATGTCGGCGTTGTCCGCGGTGGCGCCTGTGATTGACTACATGCTGCAGGCCGTCTACTACCTGTTCACCGACTGCGGGGGGGTGGTCCTCAACGAGCCTCCGTCCGTTGCCGGTTTGTTCTGCACCCCCATCGCCCTGTATTACCCTTCTTCCCTTTTCCTTATTGCTTTTGTGTACAGGGTTTTCTTCTATGTCTCTTATTTCTGCTTGTTTCTCAGACTGTTGTGTGTATCGTCGTTCATTCCGCTGTTCGTTCGGCGGCGCCCCTCCTCTCCCCCTTGGTTTCTTATTTCCATCATCTTTTTTACGTCGTCCCGTACTTGGCCCCTTGTCATTGCACGCGGGTCTGCCGTCTTTGCCTTTTCTGTGTGCTTCTTACTTTCGCCCTTCCGTTCTATATCTCGTTTCTTTCCGGGTTCTGTATGCCTCGTATTTCGTTCATGTGTCCTTTCGCTCGCGTCGCCTGGTCCGCCCGTCCTGAGAGTCCCCTGTCTTATGTTCGTTGGTGGGTGGAGCGATTCAGTGTCGTCATAATTTGGTCGGGTGTGCCGCCGGGCTTTTTTCTTACTGGTTACGTTCATTATGCCCCGCGTCGCTATGTTTATTAATATTTATGATACTTTCACACCGCATGCGAGCTGAAGGCGTCGTTGCTGTACGTACCCGTCC]

[+] EMBL BE040367             [GATCATCGCCGTGCTGTACACCACGGCGCAGGTCACGCGCGACGTTCACCGGCTCAGCTGGGGACGGGACGTCATCGCGGGGAGGAAGGCGGCGGCCGTCGTTGACTTCGCCGGAGATCAGGTCGTCGCTTACCTGTTGATGTCGGCGTTGTCCGCGGTGGCGCCTGTGATTGACTACATGCTGCAGGCCGTCTACTACCTGTTCACCGACTGCGGGGGGGTGGTCCTCAACGAGCCTCCGTCCGTTGCCGGTTTGTTCTGCACCCCCATCGCCCTGTATTACCCTTCTTCCCTTTTCCTTATTGCTTTTGTGTACAGGGTTTTCTTCTATGTCTCTTATTTCTGCTTGTTTCTCAGACTGTTGTGTGTATCGTCGTTCATTCCGCTGTTCGTTCGGCGGCGCCCCTCCTCTCCCCCTTGGTTTCTTATTTCCATCATCTTTTTTACGTCGTCCCGTACTTGGCCCCTTGTCATTGCACGCGGGTCTGCCGTCTTTGCCTTTTCTGTGTGCTTCTTACTTTCGCCCTTCCGTTCTATATCTCGTTTCTTTCCGGGTTCTGTATGCCTCGTATTTCGTTCATGTGTCCTTTCGCTCGCGTCGCCTGGTCCGCCCGTCCTGAGAGTCCCCTGTCTTATGTTCGTTGGTGGGTGGAGCGATTCAGTGTCGTCATAATTTGGTCGGGTGTGCCGCCGGGCTTTTTTCTTACTGGTTACGTTCATTATGCCCCGCGTCGCTATGTTTATTAATATTTATGATACTTTCACACCGCATGCGAGCTGAAGGCGTCGTTGCTGTACGTACCCGTCC]
[+] EMBL CA758669             [GATCATCGCCGTGCTGTACACCACGGCGCAGGTCACGCGCGACGTTCACCGGCTCAGCTGGGGACGGGACGTCATCGCGGGGAGGAAGGCGGCGGCCGTCGTTGACTTCGCCGGAGATCAGGTCGTCGCTTACCTGTTGATGTCGGCGTTGTCGGCGGCGGCGCCGGTGACGGACTACATGCGTCAGGCCGCCGACANCCTGTTCACCGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_1506#0 GATCATCGCCGTGCTGTACACCACGGCGCAGGTCACGCGCGACGTTCACCGGCTCAGCTG GGGACGGGACGTCATCGCGGGGAGGAAGGCGGCGGCCGTCGTTGACTTCGCCGGAGATCA GGTCGTCGCTTACCTGTTGATGTCGGCGTTGTCCGCGGTGGCGCCTGTGATTGACTACAT GCTGCAGGCCGTCTACTACCTGTTCACCGACTGCGGGGGGGTGGTCCTCAACGAGCCTCC GTCCGTTGCCGGTTTGTTCTGCACCCCCATCGCCCTGTATTACCCTTCTTCCCTTTTCCT TATTGCTTTTGTGTACAGGGTTTTCTTCTATGTCTCTTATTTCTGCTTGTTTCTCAGACT GTTGTGTGTATCGTCGTTCATTCCGCTGTTCGTTCGGCGGCGCCCCTCCTCTCCCCCTTG GTTTCTTATTTCCATCATCTTTTTTACGTCGTCCCGTACTTGGCCCCTTGTCATTGCACG CGGGTCTGCCGTCTTTGCCTTTTCTGTGTGCTTCTTACTTTCGCCCTTCCGTTCTATATC TCGTTTCTTTCCGGGTTCTGTATGCCTCGTATTTCGTTCATGTGTCCTTTCGCTCGCGTC GCCTGGTCCGCCCGTCCTGAGAGTCCCCTGTCTTATGTTCGTTGGTGGGTGGAGCGATTC AGTGTCGTCATAATTTGGTCGGGTGTGCCGCCGGGCTTTTTTCTTACTGGTTACGTTCAT TATGCCCCGCGTCGCTATGTTTATTAATATTTATGATACTTTCACACCGCATGCGAGCTG AAGGCGTCGTTGCTGTACGTACCCGTCC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)