These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15104#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 744 fasta sequence [GGAGTAGAAACTCTCCGTCGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTCGTCCTGTGGGCTCGCCGGAGTCGTCGTCGTTGTCTGCTCCGGTGGAGATCGCCGCCTCTCGCCGGAAGCGGCGGTCTCGGTCGTGGGCTTCCGAGTACAACATGTTCGACCAGA-CCAAC-GACGACGACG-ACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG----TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAAAAAGGGGAAAAAAATGAATGCCAGATGCTACAGAGTTGCTGAATTATTGTAAC] [+] EMBL CF333966 [GGAGTAGAAACTCTCCGTCGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTTGT ] [+] EMBL CF333459 [ GAGTAGAAACTCTCCGTCGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGC ] [+] EMBL CF334506 [ GAGTAGAAACTCTCCGTCGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAA ] [+] EMBL CF332845 [ GAGTAGAAACTCTCCGTCGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTCGTCCTGTGGGCTCGCCGG ] [+] EMBL CF333769 [ GAGTAGAAACTCTCCGTCGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGAC ACT CGAC ACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTC ] [+] EMBL CF333996 [ AGT GAAACTCTCCGTCGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGAC ACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTCGTC ] [+] EMBL CF332519 [ CGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGAC ACTCCGAC ACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTC ] [+] EMBL CF337397 [ CGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTCGTCCTGTGGGCTCG ] [+] EMBL CF335592 [ CGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTCGTCCTGTGGGCTCGCCGGAGTCGTCGTCGTTGTCTGCTCCGGTGGAGATCGCCGCCTCTCGCCGGAAGCGGCGGTCTCGGTCGTGGGCTTCCGAGTACAACATGTTCGACCAGA CCAAC GACGACGACG ACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGGTTGATTGATTGATTGATTGCGAATAGGATATAC ] [+] EMBL CF335853 [ CGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTCGTCCTGTGGGCTCGCCGGAGTCGTCGTCGTTGTCTGCTCCGGTGGAGATCGCCGCCTCTCGCCGGAAGCGGCGGTCTCGGTCGTGGGCTTCCGAGTACAACATGTTCGACCAGA CCAAC GACGACGACG ACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG TTGATTGATTGATTGCGAATAGGATATAC ] [+] EMBL CF334174 [ CGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTCGTCCTGTG ] [+] EMBL AK109325 [ GTCCAGGAGACGGCCGGCGACGGCGACGGTGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTCGTCCTGTGGGCTCGCCGGAGTCGTCGTCGTTGTCTGCTCCGGTGGAGATCGCCGCCTCTCGCCGGAAGCGGCGGTCTCGGTCGTGGGCTTCCGAGTACAACATGTTCGACCAGA CCAAC GACGACGACG ACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAGAAAGGGGAAAAAAATGAATGCCAGATGCTACAGAGTTGCTGAATTATTGTAAC] [-] EMBL CF332846 [ GTCGTCCTGTGGGCTCGCCGGAGTCGTCGTCGTTGTCTGCTCCGGTGGAGATCGCCGCCTCTCGCCGGAAGCGGCGGTCTCGGTCGTGGGCTTCCGAGTACAACATGTTCGACCAGA CCAAC GACGACGACG ACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAA ] [-] EMBL CF334507 [ TGTGGGCTCGCCGGAGTCGTCGTCGTTGTCTGCTCCGGTGGAGATCGCCGCCTCTCGCCGGAAGCGGCGGTCTCGGTCGTGGGCTTCCGAGTACAACATGTTCGACCAGACCCAACGGACGACGACGAACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAA ] [-] EMBL CF333967 [ TCGCCGGAGTCGTCGTCGTTGTCTGCTCCGGTGGAGATCGCCGCCTCTCGCCGGAAGCGGCGGTCTCGGTCGTGGGCTTCCGAGTACAACATGTTCGACCAGA CCAAC GACGACGACGAACGCTGT AAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAA ] [-] EMBL CF335854 [ CTTCCGAGTACAACATGTTCGACCAGA CCAAC GACGACGACG ACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAA ] [-] EMBL CF333460 [ CGAGTACAACATGTTCGACCAGA CCAAC GACGACGACG ACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAA ] [-] EMBL CF335593 [ TACAACATGTTCGACCAGA CCAAC GACGACGACG ACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGGTTGATTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAA ] [-] EMBL CF333997 [ ATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAA ] [-] EMBL CF317941 [ ATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||