These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15123#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 2244 fasta sequence [AGCACTCCTAGTTGCTTACGTTGATATTGTTGAGAGCGTTAAGAATGGAAAGCCTAGCACCGAGTATTACTCAAAGCTTGTTAAAGCTGACATTCATGGAAAGGACAAGGAAATTTATTCCATTAAATTGCCTGGCAATTTTAAGCTGGGTGAGGGGAAGCCAGAAAACCAAAATCATGCCATAATATTCACCCGTGGAAATGCAGTGCAAACCATTGATATGAATCAGGATAACTATTTTGAGGAGGCACTCAAAATGAGAAACCTGCTTGAGGAATTCTATCAGAATCATGGCAAGCACAAGCCTTCAATTCTTGGTGTTAGAGAACACGTGTTCACGGGAAGTGTTTCTTCGCTGGCCTCGTTTATGTCCAATCAGGAAACTAGTTTTGTCACATTGGGACAGCGTGTTCTGGCCAATCCACTGAAAGTAAGAATGCATTATGGCCATCCAGATGTTTTTGATAGAATTTTTCATATAACGAGGGGTGGAATAAGTAAGGCCTCCCGTGTCATCAATATCAGTGAGGATATTTATGCAGGGTTCAACTCAACTCTGCGCTTAGGGAACATAACTCATCATGAATATATTCAGGTTGGAAAGGGAAGAGACGTTGGTCTTAATCAGATTGCACTGTTCGAAGGAAAAGTTGCTGGAGGAAATGGTGAGCAAGTGCTCAGCCGGGATATATACAGACTTGGACAGCTTTTTGACTTTTTCAGGATGTTGTCCTTCTATGTGACAACTATTGGGTTCTACTTCTGCACCATGCTAACTGTTTGGACCGTGTACATATTTCTCTATGGGAAAACCTATCTGGCTTTGTCTGGAGTTGGAGAATCAATTCAGAATAGGGTGGATATATTGCAGAACACAGCCTTGAATGCAGCTCTGAACACACAGTTTCTTTTCCAGATTGGTGTATTTACTGCTATTCCTATGATTCTGGGTTTCATCCTGGAATTTGGTGTCTTGACGGCTTTTGTCAGCTTCATCACGATGCAGTTCCAACTTTGCTCTGTATTTTTTACTTTCTCCCTGGGTACAAGGACCCACTATTTTGGCCGCACAATACTACATGGTGGTGCAAAGTATAGAGCAACCGGTAGGGG--TTTTGTGGTACGACATATCAAATTTGCTGAAAACTACCGTCTTTATTCCAGGAGCCATTTTGTGAAAGGGTTGGAGGTTGCTCTTTTGTTAGTGATCTTTTTAGCGTATGGTTTTAACAATGGTGGAGCAGTTGGCTACATTTTGCTTTCCATAAGTAGCTGGTTTATGGCAGTTTCTTGGCTTTTTGCTCCATACATATTCAATCCATCTGGATTTGAATGGCAGAAGGTCGTTGAGGATTTCAGAGACTGGACGAATTGGCTGTTTTACCGAGGTGGTATTGGGGTTAAGGGAGAAGAAAGTTGGGAAGCCTGGTGGGATGAAGAACTGGCACATATTCACAATGTTGGTGGGAGGATACTGGAAACTGTACTGAGTTTAAGATTTTTCATCTT-CCAGTAT-GGAGTTGTTTA-CCA-TAT-GGATGCAAG-CGAATCAA-GTAAAGCACTA-TTGATATATTGGATATCATGGGCTGTGCTTGGTGGCCTTTT-TGTCCTCTTACTGGTATTCGGTTTGAATCCCAAGGCGATGGTGCATTTCCAGTTGTTCCTCCGACTTATCAAAAGCATTGCGCTACTGATGGTTTTGGC-GGGCTTGGTTGTGGCAGTTGTGTTTACAA-GCCTTAGTGTC-AAAGATGTGTTTGCTGCCATCTTAGCATTTGTGCCAACTGGCTGGGG-AGTTCTTTCGATCGCTGTGGCGTGGAAACCTATT-GTGAAGAAACTAGGTCTATGGAAAACAGTGCGCT-CTCTAGCTCGCCTGTACGATGCTGGCACAGGAATGATCATTTTTGTCCCGATAGCCATCTTTTCCTGGTTTCCTTTCATATCCACCTTCCAGACCCGACTTCTATTTAACCAGGCTTTCAGCAGAGGTTTGGAGATCTCTCTCATTCTTGCTGGCAACAATCCAAATGCGGGAGTATGACTGTAGCTGCTCCCATCCATCTAAGCATCTCCATTCAGATCGTGGAGCTTTACAATCACTGTTGTTCTCTCTTAGCAGTAGGATGTATATATTTCATGGACGGGGAGTCGTGGATGTATCCTGTTGGCCACATTGTTGTATTGATCTTAGTGCTTCTAATTGTGATTGCTACTGTTGTTTTGTAGCTTTAGTTGTGGAGTTAGCTTTTC] [+] EMBL CB671521 [AGCACTCCTAGTTGCTTACGTTGATATTGTTGAGAGCGTTAAGAATGGAAAGCCTAGCACCGAGTATTACTCAAAGCTTGTTAAAGCTGACATTCATGGAAAGGACAAGGAAATTTATTCCATTAAATTGCCTGGCAATTTTAAGCTGGGTGAGGGGAAGCCAGAAAACCAAAATCATGCCATAATATTCACCCGTGGAAATGCAGTGCAAACCATTGATATGAATCAGGATAACTATTTTGAGGAGGCACTCAAAATGAGAAACCTGCTTGAGGAATTCTATCAGAATCATGGCAAGCACAAGCCTTCAATTCTTGGTGTTAGAGAACACGTGTTCACGGGAAGTGTTTCTTCGCTGGCCTCGTTTATGTCCAATCAGGAAACTAGTTTTGTCACATTGGGACAGCGTGTTCTGGCCAATCCACTGAAAGTAAGAATGCATTATGGCCATCCAGATGTTTTTGATAGAATTTTTCATATAACGAGGGGTGGAATAAGTAAGGCCTCCCGTGTCATCAATATCAGTGAGGATATTTATGCAGGGTTCAACTCAACTCTGCGCTTAGGGAACATAACTCATCATGAATATATTCAGGTTGGAAAGGGAAGAGACGTTGGTCTTAATCAGATTGCACTGTTCGAAGGAAAAGTTGCTGGAGGAAATGGTGAGCAAGTGCTCAGCCGGGATATATACAGACTTGGACAGCTTTTTGACTTTTTCAGGATGTTGTCCTTCTATGTGACAACTATTGGGTTCTACTTCTGCACCATGCTAACTGTTTGGACCGTGTACATATTTCTCTATGGGAAAACCTATCT ] [+] EMBL CF307470 [ AAAGCTTGTTAAAGCTGACATTCATGGAAAGGACAAGGAAATTTATTCCATTAAATTGCCTGGCAATTTTAAGCTGGGTGAGGGGAAGCCAGAAAACCAAAATCATGCCATAATATTCACCCGTGGAAATGCAGTGCTTTCCATTGATATGAATCAGGATAACTATTTTGAGGAGGCACTCATAATGAGAAACCTGCTTGAGGAATTCTATCAGAATCATGGCAAGCACAAGCCTTCAATTCTTGGTGTTAGAGAACACGTGTTCACGGGAAGTGTTTCTTCGCTGGCCTCGTTTATGTCCAATCAGGAAACTAGTTTTGTCACATTGGGACAGCGTGTTCTGGCCAATCCACTGAAAGTAAGAATGCATTATGGCCATCCAGATGTTTTTGATAGAATTTTTCATATAACGAGGGGTGGAATAAGTAAGGCCTCCCGTGTCATCAATATCAGTGAGGATATTTATGCAGGGTTCAACTCAACTCTGCGCTTANGGAACATAACTCATCATGAATATATTCAG ] [+] EMBL AK069531 [ ACCATTGATATGAATCAGGATAACTATTTTGAGGAGGCACTCAAAATGAGAAACCTGCTTGAGGAATTCTATCAGAATCATGGCAAGCACAAGCCTTCAATTCTTGGTGTTAGAGAACACGTGTTCACGGGAAGTGTTTCTTCGCTGGCCTCGTTTATGTCCAATCAGGAAACTAGTTTTGTCACATTGGGACAGCGTGTTCTGGCCAATCCACTGAAAGTAAGAATGCATTATGGCCATCCAGATGTTTTTGATAGAATTTTTCATATAACGAGGGGTGGAATAAGTAAGGCCTCCCGTGTCATCAATATCAGTGAGGATATTTATGCAGGGTTCAACTCAACTCTGCGCTTAGGGAACATAACTCATCATGAATATATTCAGGTTGGAAAGGGAAGAGACGTTGGTCTTAATCAGATTGCACTGTTCGAAGGAAAAGTTGCTGGAGGAAATGGTGAGCAAGTGCTCAGCCGGGATATATACAGACTTGGACAGCTTTTTGACTTTTTCAGGATGTTGTCCTTCTATGTGACAACTATTGGGTTCTACTTCTGCACCATGCTAACTGTTTGGACCGTGTACATATTTCTCTATGGGAAAACCTATCTGGCTTTGTCTGGAGTTGGAGAATCAATTCAGAATAGGGTGGATATATTGCAGAACACAGCCTTGAATGCAGCTCTGAACACACAGTTTCTTTTCCAGATTGGTGTATTTACTGCTATTCCTATGATTCTGGGTTTCATCCTGGAATTTGGTGTCTTGACGGCTTTTGTCAGCTTCATCACGATGCAGTTCCAACTTTGCTCTGTATTTTTTACTTTCTCCCTGGGTACAAGGACCCACTATTTTGGCCGCACAATACTACATGGTGGTGCAAAGTATAGAGCAACCGGTAGGGG TTTTGTGGTACGACATATCAAATTTGCTGAAAACTACCGTCTTTATTCCAGGAGCCATTTTGTGAAAGGGTTGGAGGTTGCTCTTTTGTTAGTGATCTTTTTAGCGTATGGTTTTAACAATGGTGGAGCAGTTGGCTACATTTTGCTTTCCATAAGTAGCTGGTTTATGGCAGTTTCTTGGCTTTTTGCTCCATACATATTCAATCCATCTGGATTTGAATGGCAGAAGGTCGTTGAGGATTTCAGAGACTGGACGAATTGGCTGTTTTACCGAGGTGGTATTGGGGTTAAGGGAGAAGAAAGTTGGGAAGCCTGGTGGGATGAAGAACTGGCACATATTCACAATGTTGGTGGGAGGATACTGGAAACTGTACTGAGTTTAAGATTTTTCATCTT CCAGTAT GGAGTTGTTTA CCA TAT GGATGCAAG CGAATCAA GTAAAGCACTA TTGATATATTGGATATCATGGGCTGTGCTTGGTGGCCTTTT TGTCCTCTTACTGGTATTCGGTTTGAATCCCAAGGCGATGGTGCATTTCCAGTTGTTCCTCCGACTTATCAAAAGCATTGCGCTACTGATGGTTTTGGC GGGCTTGGTTGTGGCAGTTGTGTTTACAA GCCTTAGTGTC AAAGATGTGTTTGCTGCCATCTTAGCATTTGTGCCAACTGGCTGGGG AGTTCTTTCGATCGCTGTGGCGTGGAAACCTATT GTGAAGAAACTAGGTCTATGGAAAACAGTGCGCT CTCTAGCTCGCCTGTACGATGCTGGCACAGGAATGATCATTTTTGTCCCGATAGCCATCTTTTCCTGGTTTCCTTTCATATCCACCTTCCAGACCCGACTTCTATTTAACCAGGCTTTCAGCAGAGGTTTGGAGATCTCTCTCATTCTTGCTGGCAACAATCCAAATGCGGGAGTATGACTGTAGCTGCTCCCATCCATCTAAGCATCTCCATTCAGATCGTGGAGCTTTACAATCACTGTTGTTCTCTCTTAGCAGTAGGATGTATATATTTCATGGACGGGGAGTCGTGGATGTATCCTGTTGGCCACATTGTTGTATTGATCTTAGTGCTTCTAATTGTGATTGCTACTGTTGTTTTGTAGCTTTAGTTGTGGAGTTAGCTTTT ] [+] EMBL CB620129 [ CCCCTGTCATCAATATCAGTGAGGATATTTATGCAGGGTTCAACTCAACTCTGCGCTTAGGGAACATAACTCATCATGAATATGTTCAGGTTGGAAAGGGAAGAGACGTTGGTCTTAATCAGATTGCACTGTTCGAAGGAAAAGTTGCTGGAGGAAATGGTGAGCAAGTGCTCAGCCGGGATATATACAGACTTGGACAGCTTTTTGACTTTTTCAGGATGTTGTCCTTCTATGTGACAACTATTGGGTTCTACTTCTGCACCATGCTAACTGTTTGGACCGTGTACATATTTCTCTATGGGAAAACCTATCTGGCTTTGTCTGGAGTTGGAGAATCAATTCAGAATAGGGCGGATATATTGCAGAACACAGCCTTGAATGCAGCTCTGAACACACAGTTTCTTTTCCAGATTGGTGTATTTACTGCTATTCCTATGATTCTGGGTTTCATCCTGGAATTTGGTGTCTTGACGGCTTTTGTCAGCTTCATCACGATGCAGNTCCAACTTTGCTCTGTATTTTT ] [+] EMBL CB618915 [ TCATGAATATGTTCAGGTTGGAAAGGGAAGAGACGTTGGTCTTAATCAGATTGCACTGTTCGAAGGAAAAGTTGCTGGAGGAAATGGTGAGCAAGTGCTCAGCCGGGATATATACAGACTTGGACAGCTTTTTGACTTTTTCAGGATGTTGTCCTTCTATGTGACAACTATTGGGTTCTACTTCTGCACCATGCTAATTGTTTGGACCGTGTACATATTTCTCTATGGGAAAACCTATCTGGCTTTGTCTGGAGTTGGAGAATCAATTCAGAATAGGGCGGATATATTGCAGAACACAGCCTTGAATGCAGCTCTGAACACACAGTTTCTTTTCCAGATTGGTGTATTTACTGCTATTCCTATGATTCTGGGTTTCATCCTGGAATTTGGTGTCTTGACGGCTTTTGTCAGCTTCATCACGATGCAGTTCCAACTTTGCTCTGTATTTTTTACTTTCTCCCTGGGTACAAGGACCCACTATTTTGGCCGCACAATACTACATGGTGGTGCAAAGTATAGAGCAACCGGTAGGGG TTTTGTGGTACGACATATCAAATTTGCTGAAAACTACCGTCTTTATTCCAGGAGCCATTTTGTGAAAGGGTTGGAGGTTGCTCTTTTGTTAGTGATCTTTTTAGCGTATGGTTTTAACAATGGTGGAGCAGTTGGCTACATTTTGCTTTCCATAAGTAGCTGGTTTATGGCAGTTTCTTGGCTTTTTGCTCCATACATATTCAATCCATCTGGA ] [+] EMBL AU062726 [ TTCTCTATGGGAAAACCTATCTGGCTTTGTCTGGAGTTGGAGAATCAATTCAGAATAGGGTGGATATATTGCAGAACACAGCNTTGAATGCAGCTCTGAACACACAGTTTCTTTTCCAGATTGGTGTATTTACTGCTATTCGNATGATTCTNGGTTTCATCCTGGAATTTGGTGTCTTGACGGCTTTTGTCAGCTTCATCACGATGCAGTTCCAACTTTGCTCTGTATTTTTAACTNTNTCCCTGGGTACAAGGACCCACTATTTTGGCCGCACAATACTACATGGTGGTGCAAAGTATAGAGCAACCGGTAGGGGGTTTTTTTGGTACGGCA ] [+] EMBL BE040137 [ GTGTCTTGACGGCTTTTGTCAGCTTCATCACGATGCAGTTCCAACTTTGCTCTGTATTTTTTACTTTCTCCCTGGGTACAAGGACCCACTATTTTGGCCGCACAATACTACATGGTGGTGCAAAGTATAGAGCAACCGGTAGGGG TTTTGTGGTACGACATATCAAATTTGCTGAAAACTACCGTCTTTATTCCAGGAGCCATTTTGTGAAAGGGTTGGAGGTTGCTCTTTTGTTAGTGATCTTTTTAGCGTATGGTTTTAACAATGGTGGAGCAGTTGGCTACATTTTGCTTTCCATAAGTAGCTGGTTTATGGCAGTTTCTTGGCTTTTTGCTCCATACATATTCAATCCATCTGGATTTGAATGGCAGAAGGTCGTTGAGGATTTCAGAGACTGGACGAATTGGCTGTTTTACCGAGGTGGTATTGGGGTTAAGGGAGAAGAAAGTTGGGAAGCCTGGTGGGATGAAGAACTGGCACATATTCACAATGTTGGTGGGAGGATACTGGAAACTGTACTGAGTTTAAGATTTTTCATCTT CCAGTAT GGAGTTGTTTA CCA TAT GGATGCAAG CGAATCAA GTAAAGCACTA TTGATATATTGGATATCATGGGCTGTGCTNGGTGGCCTTTTNTGTCCTC TACTGGTATTC GTTTGAATCCCAAGGCGATGGTGCATTTNCAGTTGTTCCTTCGACTTATCAAAAGCATTGCGCTACTGATGGNTTTGGCNCGGCTTGGNTGTGGCANNTGTGTTTACAAGGCCTTAGTGTCAAAAGATGTG TTGTTGCAATCTTA CATTTGGGGCAACTGCCTGGGGAAGTT TTTCGATCGTTGT GCGTGGGAAACTATTGGTGAGAAAACTAGGTTTTTGG AAACAATGCGCTACTTTA CTTGTTTGTCCGA GCTGGCACAAGAATGATCATTTTTGT CCGATA CCAACTCTTTCTTGTNTCCTTATA ATCCACCTTCCAAACCC CCTT TATTTAACCAGGCTTT AAAAAAGGGTTGGA AT T TTTTATTTTTGTTG AACAAATCAAAagg ] [+] EMBL AK059373 [ GCTTTTGTCAGCTTCATCACGATGCAGTTCCAACTTTGCTCTGTATTTTTTACTTTCTCCCTGGGTACAAGGACCCACTATTTTGGCCGCACAATACTACATGGTGGTGCAAAGTATAGAGCAACCGGTAGGGG TTTTGTGGTACGACATATCAAATTTGCTGAAAACTACCGTCTTTATTCCAGGAGCCATTTTGTGAAAGGGTTGGAGGTTGCTCTTTTGTTAGTGATCTTTTTAGCGTATGGTTTTAACAATGGTGGAGCAGTTGGCTACATTTTGCTTTCCATAAGTAGCTGGTTTATGGCAGTTTCTTGGCTTTTTGCTCCATACATATTCAATCCATCTGGATTTGAATGGCAGAAGGTCGTTGAGGATTTCAGAGACTGGACGAATTGGCTGTTTTACCGAGGTGGTATTGGGGTTAAGGGAGAAGAAAGTTGGGAAGCCTGGTGGGATGAAGAACTGGCACATATTCACAATGTTGGTGGGAGGATACTGGAAACTGTACTGAGTTTAAGATTTTTCATCTT CCAGTAT GGAGTTGTTTA CCA TAT GGATGCAAG CGAATCAA GTAAAGCACTA TTGATATATTGGATATCATGGGCTGTGCTTGGTGGCCTTTT TGTCCTCTTACTGGTATTCGGTTTGAATCCCAAGGCGATGGTGCATTTCCAGTTGTTCCTCCGACTTATCAAAAGCATTGCGCTACTGATGGTTTTGGC GGGCTTGGTTGTGGCAGTTGTGTTTACAA GCCTTAGTGTC AAAGATGTGTTTGCTGCCATCTTAGCATTTGTGCCAACTGGCTGGGG AGTTCTTTCGATCGCTGTGGCGTGGAAACCTATT GTGAAGAAACTAGGTCTATGGAAAACAGTGCGCT CTCTAGCTCGCCTGTACGATGCTGGCACAGGAATGATCATTTTTGTCCCGATAGCCATCTTTTCCTGGTTTCCTTTCATATCCACCTTCCAGACCCGACTTCTATTTAACCAGGCTTTCAGCAGAGGTTTGGAGATCTCTCTCATTCTTGCTGGCAACAATCCAAATGCGGGAGTATGACTGTAGCTGCTCCCATCCATCTAAGCATCTCCATTCAGATCGTGGAGCTTTACAATCACTGTTGTTCTCTCTTAGCAGTAGGATGTATATATTTCATGGACGGGGAGTCGTGGATGTATCCTGTTGGCCACATTGTTGTATTGATCTTAGTGCTTCTAATTGTGATTGCT ] [+] EMBL OSR1907A [ ccGGTTTTAACAATGGTGGAGCAGTTGGCTACATTTTGCTTTCCATTAGTAGCTGGTTTATGGCAGTTTCTTGGCTTTTTGCTCCATACATNTTCAATCCATNTGGATTTGAATGGCAGAAGGTCGTTGAGGATTTCAGAGACTGGACGAATTGGCTGTTTTACCGAGGTGGTATTGGGGTTAAGGGAGAAGAAAGTTNGGAAGCCTGGTGGGATGAAGAACTGGCACATATTCACAATGTTGGTGGGAGGATACTGGAAACTGTACTGAGTTTAAGATTTTTCATCTTCCCAGTAT GGAGTTGGTTA CCA TNTGGGATGCAAGCCGAATNAA GTAAAGCACTA T ] [+] EMBL OSR3242A [ ATGGTGGAGCAGTTGGCTACATTTTGCTTTCCATAAGTAGCTGGTTTATGGCAGTTTCTTGGCTTTTTGCTCCATACATATTCAATCCATCTGGATTTGAATGGCAGAAGGTCGTTGAGGATTTCAGAGACTGGACGAATTGGCTGTTTTACCGAGGTGGTATTGGGGTTAAGGGAGAAGAAAGTTGGGAAGCCTGGTGGGATGAAGAACTGGCACATATTCACAATGTTGGTGGGAGGATACTGGAAACTGTACTGAGTTTAAGATTTTTCATCTT CCAGTATGGGAGTTGTTTACCCATTNT GGATGCAAG CGAATCAAGGTAAAGCACTATTTGATATAT ] [+] EMBL CB097083 [ AGGATTT AGAGACTGGACGAATTGGCTGTTTTACCGAGGTGGTATTGGGGTTAAGGGAGAAGAAAGTTGGGAAGCCTGGTGGGATGAAGAACTGGCACATATTCACAATGTTGGTGGGAGGATACTGGAAACTGTACTGAGTTTAAGATTTTTCGTCTT CCAGTAT GGAGTTGTTTA CCA TAT GGATGCAAG CGAATCAA GTAAAGCACTA TTGATATATTGGATATCATGGGCTGTGCTTGGTGGCCTTTT TGTCCTCCTACTGGTATTCGGTTTGAATCCCAAGGCGATGGTGCATTTCCAGTTGTTCCTCCGACTTATCAAAAGCATTGCGCTACTGATGGTTTTGGC GGGCTTGGTTGTGGCAGTTGTGTTTACAA GCCTTAGTGTC AAAGATGTGTTTGCTGCCATCTTAGCATTTGTGCCAACTGGCTGGGG AGTTCTTTCGATCGCTGTGGCGTGGAAACCTATT GTGAAGAAACTAGGTCTATGGAAAACAGTGCGCT CACTAGCTCGTCTGTACGATGCTGGCACAGGAATGATCATTTTTGTCCCGATAGCCATCTTTTCCTGGTTTCCTTTCATATCCACCTTCCAGACCCGACTTCTATTTAACCAGGCTTTCAGCAGAGGTTTGGAGATCTCTCTCATTCTTGCTGGCAACAATCCAAATGCGGGAGTATGACTGTAGCTGCTCCCATCCATCTAAGCATCTCCATTCAGATCGTGGAGCTTTACAATCACTG NGTTCTCTCTTAGCAGTAGGATGT ] [-] EMBL CB620130 [ CATCTT CCAGTAT GGAGTTGTTTA CCA TAT GGATGCAAG CGAATCAA GTAAAGCACTA TTGATATATTGGATATCATGGGCTGTGCTTGGTGGCCTTTT TGTCCTCCTACTGGTATTCGGTTTGAATCCCAAGGCGATGGTGCATTTCCAGTTGTTCCTCCGACTTATCAAAAGCATTGCGCTATTGATGGTTTTGGC GGGCTTGGTTGTGGCAGTTGTGTTTACAA GCCTTAGTGTC AAAGATGTGTTTGCTGCCATCTTAGCATTTGTGCCAACTGGCTGGGG AGTTCTTTCGATCGCTGTGGCGTGGAAACCTATT GTGAAGAAACTAGGTCTATGGAAAACAGTGCGCT CACTAGCTCGTTTGTACGATGCTGGCACAGGAATGATCATTTTTGTCCCGATAGCCATCTTTTCCTGCCCCCCCTTCATATCCACCTTCCAGACCCGACTTCTATTTAACCAGGCTTTCAGCAGAGGTTTGGAGATCTCTCTCATTCTTGCTGGCAACAATCCAAATGCGGGAGTATGACTGTAGCTGCTCCCATCCATCTAAGCATCTCCATTCAGATCGTGGAGCTTTACAATCACTG TGTTCTCTCTTAGCAGTAGGATGTATATATTTCATGGCCGGGGAGTCGTGGATGTATCCTGTTGGCCACATTGTTTTTTTGGGATTAGTGCTTCTAATTGTGATTGCTACTG ] [+] EMBL CB666398 [ CA TAT GGATGCAAG CGAATCAA GTAAAGCACTA TTGATATATTGGATATCATGGGCTGTGCTTGGTGGCCTTTT TGTCCTCTTACTGGTATTCGGTTTGAATCCCAAGGCGATGGTGCATTTCCAGTTGTTCCTCCGACTTATCAAAAGCATTGCGCTACTGATGGTTTTGGC GGGCTTGGTTGTGGCAGTTGTGTTTACAA GCCTTAGTGTC AAAGATGTGTTTGCTGCCATCTTAGCATTTGTGCCAACTGGCTGGGG AGTTCTTTCGATCGCTGTGGCGTGGAAACCTATT GTGAAGAAACTAGGTCTATGGAAAACAGTGCGCT CTCTAGCTCGCCTGTACGATGCTGGCACAGGAATGATCATTTTTGTCCCGATAGCCATCTTTTCCTGGTTTCCTTTCATATCCACCTTCCAGACCCGACTTCTATTTAACCAGGCTTTCAGCAGAGGTTTGGAGATCTCTCTCATTCTTGCTGGCAACAATCCAAATGCGGGAGTATGACTGTAGCTGCTCCCATCCATCTAAGCATCTCCATTCAGATCGTGGAGCTTTACAATCACTGTTGTTCTCTCTTAGCAGTAGGATGTATATATTTCATGGACGGGGAGTCGTGGATGTATCCTGTTGGCCACATTGTTGTATTGATCTTAGTGCTTCTAATTGTGATTGCTACTGTTGTTTTGTAGCTTTAGTTGTGGAGTTAGCTTTT ] [-] EMBL CB671522 [ CAAG CGAATCAA GTAAAGCACTA TTGATATATTGGATATCATGGGCTGTGCTTGGTGGCCTTTT TGTCCTCTTACTGGTATTCGGTTTGAATCCCAAGGCGATGGTGCATTTCCAGTTGTTCCTCCGACTTATCAAAAGCATTGCGCTACTGATGGTTTTGGC GGGCTTGGTTGTGGCAGTTGTGTTTACAA GCCTTAGTGTC AAAGATGTGTTTGCTGCCATCTTAGCATTTGTGCCAACTGGCTGGGG AGTTCTTTCGATCGCTGTGGCGTGGAAACCTATT GTGAAGAAACTAGGTCTATGGAAAACAGTGCGCT CTCTAGCTCGCCTGTACGATGCTGGCACAGGAATGATCATTTTTGTCCCGATAGCCATCTTTTCCTGGTTTCCTTTCATATCCACCTTCCAGACCCGACTTCTATTTAACCAGGCTTTCAGCAGAGGTTTGGAGATCTCTCTCATTCTTGCTGGCAACAATCCAAATGCGGGAGTATGACTGTAGCTGCTCCCATCCATCTAAGCATCTCCATTCAGATCGTGGAGCTTTACAATCACTGTTGTTCTCTCTTAGCAGTAGGATGTATATATTTCATGGACGGGGAGTCGTGGATGTATCCTGTTGGCCACATTGTTGTATTGATCTTAGTGCTTCTAATTGTGATTGCTACTGTTGTTTTGTAGCTTTAGTTGTGGAGTTAGCTTTTC] [-] EMBL CB618916 [ AAG CGAATCAA GTAAAGCACTA TTGATATATTGGATATCATGGGCTGTGCTTGGTGGCCTTTT TGTCCTCCTACTGGTATTCGGTTTGAATCCCAAGGCGATGGTGCATTTCCAGTTGTTCCTCCGACTTATCAAAAGCATTGCGCTACTGATGGTTTTGGC GGGCTTGGTTGTGGCAGTTGTGTTTACAA GCCTTAGTGTC AAAGATGTGTTTGCTGCCATCTTAGCATTTGTGCCAACTGGCTGGGG AGTTCTTTCGATCGCTGTGGCGTGGAAACCTATT GTGAAGAAACTAGGTCTATGGAAAACAGTGCGCT CACTAGCTCGTCTGTACGATGCTGGCACAGGAATGATCATTTTTGTCCCGATAGCCATCTTTTCCTGGTTTCCTTTCATATCCACCTTCCAGACCCGACTTCTATTTAACCAGGCTTTCAGCAGAGGTTTGGAGATCTCTCTCATTCTTGCTGGCAACAATCCAAATGCGGGAGTATGACTGTAGCTGCTCCCATCCATCTAAGCATCTCCATTCAGATCGTGGAGCTTTACAATCACTG TGTTCTCTCTTAGCAGTAGGATGTATATATTTCATGGACGGGGAGTCGTGGATGTATCCTGTTGGCCACATTGTTGTATTGATCTTAGTGCTTCTAATTGTGATTGCTACTGTTGTTTTGTAGCTTTAGTTGTGGAGTTAGCTTTTC] [-] EMBL CB666399 [ AAG CGAATCAA GTAAAGCACTA TTGATATATTGGATATCATGGGCTGTGCTTGGTGGCCTTTT TGTCCTCTTACTGGTATTCGGTTTGAATCCCAAGGCGATGGTGCATTTCCAGTTGTTCCTCCGACTTATCAAAAGCATTGCGCTACTGATGGTTTTGGC GGGCTTGGTTGTGGCAGTTGTGTTTACAA GCCTTAGTGTC AAAGATGTGTTTGCTGCCATCTTAGCATTTGTGCCAACTGGCTGGGG AGTTCTTTCGATCGCTGTGGCGTGGAAACCTATT GTGAAGAAACTAGGTCTATGGAAAACAGTGCGCT CTCTAGCTCGCCTGTACGATGCTGGCACAGGAATGATCATTTTTGTCCCGATAGCCATCTTTTCCTGGTTTCCTTTCATATCCACCTTCCAGACCCGACTTCTATTTAACCAGGCTTTCAGCAGAGGTTTGGAGATCTCTCTCATTCTTGCTGGCAACAATCCAAATGCGGGAGTATGACTGTAGCTGCTCCCATCCATCTAAGCATCTCCATTCAGATCGTGGAGCTTTACAATCACTGTTGTTCTCTCTTAGCAGTAGGATGTATATATTTCATGGACGGGGAGTCGTGGATGTATCCTGTTGGCCACATTGTTGTATTGATCTTAGTGCTTCTAATTGTGATTGCTACTGTTGTTTTGTAGCTTTAGTTGTGGAGTTAGCTTTTC] [+] EMBL AU173469 [ TGTNCGATGCTGGCCCAGGAATGATCATTTTTGTCCCGATAGCCATCTTTTCCTGGTTTCCTTTCATATCCNCCTTCCAGACCCGACTTCTATTTAACCAGGCTTTCAGCAGAGGTTTGGAGATCTCTCTCATTCTTGCTGGCAACAATCCAAATGCGGGAGTATGACTGTAGCTGCTCCCATCCATCTAAGCATCTCCATTCAGATCGTGGAGCTTTACAATCACTGTTGTTCTCTCTTAGCAGTAGGATGTATATATTTCATGGACGGGGAGTCGTGGATGTATCCTGTTGGCCACATTGTTGTATTGATCTTAGTGCTTCTAATTGTGATTGCTACTGTTGTTTTGTAGCTTTAGTTGTGGAGTTAGCTTTT ] [+] EMBL AU184307 [ GTACGATGCTGGCACAGGAATGATCATTTTTGTCCCGATAGCCATCTTTTCCTGGTTTCCTTTCATATCCACCTTCCAGACCCGACTTCTATTTAACCAGGCTTTCAGCAGAGGTTTGGAGATCTCTCTCATTCTTGCTGGCAACAATCCAAATGCGGGAGTATGACTGTAGCTGCTCCCATCCATCTAAGCATCTCCATTCAGATCGTGGAGCTTTACAATCACTGTTGTTCTCTCTTAGCAGTAGGATGTATATATTTCATGGACGGGGAGTCGTGGATGTATCCTGTTGGCCACATTGTTGTATTGATCTTAGTGCTTCTAATTGTGATTGCTACTGTTGTTTTGTAGCTTTAGTTGTGGAGTTAGCTTTT ] [+] EMBL AK060258 [ AGCCATCTTTTCCTGGTTTCCTTTCATATCCACCTTCCAGACCCGACTTCTATTTAACCAGGCTTTCAGCAGAGGTTTGGAGATCTCTCTCATTCTTGCTGGCAACAATCCAAATGCGGGAGTATGACTGTAGCTGCTCCCATCCATCTAAGCATCTCCATTCAGATCGTGGAGCTTTACAATCACTGTTGTTCTCTCTTAGCAGTAGGATGTATATATTTCATGGACGGGGAGTCGTGGATGTATCCTGTTGGCCACATTGTTGTATTGATCTTAGTGCTTCTAATTGTGATTGCTACTGTTGTTTTGTAGCTTTAGTTGTGGAGTTAGCTTTT ] consensusID : consensus_15123#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 536 fasta sequence [CCTTCAAAAGCTCGTGCCGAATNCCNCACGAGGTGGTATTGGGGTTAAGGGAGAAGAAAGTTGGGAAGCCTGGTGGGATNAAGAACTGGCACATATTCACAATGTTGGTGGGAGGATACTGGAAACTGTACTGAGTTTAANATTTTTCATCTTCCAGTATGGAGTTGTTTACCATATGGATGCAAGCGAATCAAGTAAAGCACTATTGATATATTGGATATCATGGGCTGTGCTTGGTGGCCTTTTTGTCCTCTTACTGGTATTCGGTTTGAATCCCAAGGCGATGGTGCATTTCNNTTTTTTCNTCCGACTTATCAAAAGCATTGCGCTACTGATGGTTTTGGCGGGCTTGGTTGTGGCAGTTGTGTTTACAAGCCTTAGTGTCAAANATGTGTTTGCTGCCATCTTAGCATTTGTGCCAACTGGCTGGGGAGTTCTTTCGATCGCTGTGGCGTGGAAACCTATTGTGAAAAAACTAGGTCTATGGAAAACAGTGCGCTCTCTAANCTCGCCTGTACGATGCTGGCACAGGGAAT] [+] EMBL AA752876 [CCTTCAAAAGCTCGTGCCGAATNCCNCACGAGGTGGTATTGGGGTTAAGGGAGAAGAAAGTTGGGAAGCCTGGTGGGATNAAGAACTGGCACATATTCACAATGTTGGTGGGAGGATACTGGAAACTGTACTGAGTTTAANATTTTTCATCTTCCAGTATGGAGTTGTTTACCATATGGATGCAAGCGAATCAAGTAAAGCACTATTGATATATTGGATATCATGGGCTGTGCTTGGTGGCCTTTTTGTCCTCTTACTGGTATTCGGTTTGAATCCCAAGGCGATGGTGCATTTCNNTTTTTTCNTCCGACTTATCAAAAGCATTGCGCTACTGATGGTTTTGGCGGGCTTGGTTGTGGCAGTTGTGTTTACAAGCCTTAGTGTCAAANATGTGTTTGCTGCCATCTTAGCATTTGTGCCAACTGGCTGGGGAGTTCTTTCGATCGCTGTGGCGTGGAAACCTATTGTGAAAAAACTAGGTCTATGGAAAACAGTGCGCTCTCTAANCTCGCCTGTACGATGCTGGCACAGGGAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15123#0 AGCACTCCTAGTTGCTTACGTTGATATTGTTGAGAGCGTTAAGAATGGAAAGCCTAGCAC 60 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 CGAGTATTACTCAAAGCTTGTTAAAGCTGACATTCATGGAAAGGACAAGGAAATTTATTC 120 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 CATTAAATTGCCTGGCAATTTTAAGCTGGGTGAGGGGAAGCCAGAAAACCAAAATCATGC 180 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 CATAATATTCACCCGTGGAAATGCAGTGCAAACCATTGATATGAATCAGGATAACTATTT 240 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 TGAGGAGGCACTCAAAATGAGAAACCTGCTTGAGGAATTCTATCAGAATCATGGCAAGCA 300 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 CAAGCCTTCAATTCTTGGTGTTAGAGAACACGTGTTCACGGGAAGTGTTTCTTCGCTGGC 360 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 CTCGTTTATGTCCAATCAGGAAACTAGTTTTGTCACATTGGGACAGCGTGTTCTGGCCAA 420 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 TCCACTGAAAGTAAGAATGCATTATGGCCATCCAGATGTTTTTGATAGAATTTTTCATAT 480 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 AACGAGGGGTGGAATAAGTAAGGCCTCCCGTGTCATCAATATCAGTGAGGATATTTATGC 540 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 AGGGTTCAACTCAACTCTGCGCTTAGGGAACATAACTCATCATGAATATATTCAGGTTGG 600 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 AAAGGGAAGAGACGTTGGTCTTAATCAGATTGCACTGTTCGAAGGAAAAGTTGCTGGAGG 660 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 AAATGGTGAGCAAGTGCTCAGCCGGGATATATACAGACTTGGACAGCTTTTTGACTTTTT 720 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 CAGGATGTTGTCCTTCTATGTGACAACTATTGGGTTCTACTTCTGCACCATGCTAACTGT 780 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 TTGGACCGTGTACATATTTCTCTATGGGAAAACCTATCTGGCTTTGTCTGGAGTTGGAGA 840 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 ATCAATTCAGAATAGGGTGGATATATTGCAGAACACAGCCTTGAATGCAGCTCTGAACAC 900 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 ACAGTTTCTTTTCCAGATTGGTGTATTTACTGCTATTCCTATGATTCTGGGTTTCATCCT 960 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 GGAATTTGGTGTCTTGACGGCTTTTGTCAGCTTCATCACGATGCAGTTCCAACTTTGCTC 1020 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 TGTATTTTTTACTTTCTCCCTGGGTACAAGGACCCACTATTTTGGCCGCACAATACTACA 1080 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 TGGTGGTGCAAAGTATAGAGCAACCGGTAGGGGTTTTGTGGTACGACATATCAAATTTGC 1140 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 TGAAAACTACCGTCTTTATTCCAGGAGCCATTTTGTGAAAGGGTTGGAGGTTGCTCTTTT 1200 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 GTTAGTGATCTTTTTAGCGTATGGTTTTAACAATGGTGGAGCAGTTGGCTACATTTTGCT 1260 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 TTCCATAAGTAGCTGGTTTATGGCAGTTTCTTGGCTTTTTGCTCCATACATATTCAATCC 1320 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 ATCTGGATTTGAATGGCAGAAGGTCGTTGAGGATTTCAGAGACTGGACGAATTGGCTGTT 1380 consensus_15123#1 --------------------------------CCTTCAAAAGCT---CGTGCCGAATNCC 25 **** * ** ** * * consensus_15123#0 TTACCGAGGTGGTATTGGGGTTAAGGGAGAAGAAAGTTGGGAAGCCTGGTGGGATGAAGA 1440 consensus_15123#1 NCAC-GAGGTGGTATTGGGGTTAAGGGAGAAGAAAGTTGGGAAGCCTGGTGGGATNAAGA 84 ** ************************************************** **** consensus_15123#0 ACTGGCACATATTCACAATGTTGGTGGGAGGATACTGGAAACTGTACTGAGTTTAAGATT 1500 consensus_15123#1 ACTGGCACATATTCACAATGTTGGTGGGAGGATACTGGAAACTGTACTGAGTTTAANATT 144 ******************************************************** *** consensus_15123#0 TTTCATCTTCCAGTATGGAGTTGTTTACCATATGGATGCAAGCGAATCAAGTAAAGCACT 1560 consensus_15123#1 TTTCATCTTCCAGTATGGAGTTGTTTACCATATGGATGCAAGCGAATCAAGTAAAGCACT 204 ************************************************************ consensus_15123#0 ATTGATATATTGGATATCATGGGCTGTGCTTGGTGGCCTTTTTGTCCTCTTACTGGTATT 1620 consensus_15123#1 ATTGATATATTGGATATCATGGGCTGTGCTTGGTGGCCTTTTTGTCCTCTTACTGGTATT 264 ************************************************************ consensus_15123#0 CGGTTTGAATCCCAAGGCGATGGTGCATTTCCAGTTGTTCCTCCGACTTATCAAAAGCAT 1680 consensus_15123#1 CGGTTTGAATCCCAAGGCGATGGTGCATTTCNNTTTTTTCNTCCGACTTATCAAAAGCAT 324 ******************************* ** *** ******************* consensus_15123#0 TGCGCTACTGATGGTTTTGGCGGGCTTGGTTGTGGCAGTTGTGTTTACAAGCCTTAGTGT 1740 consensus_15123#1 TGCGCTACTGATGGTTTTGGCGGGCTTGGTTGTGGCAGTTGTGTTTACAAGCCTTAGTGT 384 ************************************************************ consensus_15123#0 CAAAGATGTGTTTGCTGCCATCTTAGCATTTGTGCCAACTGGCTGGGGAGTTCTTTCGAT 1800 consensus_15123#1 CAAANATGTGTTTGCTGCCATCTTAGCATTTGTGCCAACTGGCTGGGGAGTTCTTTCGAT 444 **** ******************************************************* consensus_15123#0 CGCTGTGGCGTGGAAACCTATTGTGAAGAAACTAGGTCTATGGAAAACAGTGCGCTCTCT 1860 consensus_15123#1 CGCTGTGGCGTGGAAACCTATTGTGAAAAAACTAGGTCTATGGAAAACAGTGCGCTCTCT 504 *************************** ******************************** consensus_15123#0 A-GCTCGCCTGTACGATGCTGGCACAGGAATGATCATTTTTGTCCCGATAGCCATCTTTT 1919 consensus_15123#1 AANCTCGCCTGTACGATGCTGGCACAGGGAAT---------------------------- 536 * ************************* * consensus_15123#0 CCTGGTTTCCTTTCATATCCACCTTCCAGACCCGACTTCTATTTAACCAGGCTTTCAGCA 1979 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 GAGGTTTGGAGATCTCTCTCATTCTTGCTGGCAACAATCCAAATGCGGGAGTATGACTGT 2039 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 AGCTGCTCCCATCCATCTAAGCATCTCCATTCAGATCGTGGAGCTTTACAATCACTGTTG 2099 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 TTCTCTCTTAGCAGTAGGATGTATATATTTCATGGACGGGGAGTCGTGGATGTATCCTGT 2159 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 TGGCCACATTGTTGTATTGATCTTAGTGCTTCTAATTGTGATTGCTACTGTTGTTTTGTA 2219 consensus_15123#1 ------------------------------------------------------------ consensus_15123#0 GCTTTAGTTGTGGAGTTAGCTTTTC 2244 consensus_15123#1 ------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||