These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15132#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 2574 fasta sequence [GCCTCGCGATGGCGGCGCGCGCTACGTTCTCCCGCTTCCCCGTGACGGCGGAGGCGCTGGAGGCGTGCGCCGTGCAGTGGGGCATCGCCGTGACGCCCTTCGCCGCCGCCGACGAGCGCGGCCAGGCGCCGGCCGCGGGCGCCGGCGGCGACCGGGTCCCGCGCTGCGAGCACTGCTGGGCCTACCTGAACAGCCACTGCGACATGGAGCGCTGGGGCTGGTCCTGCGCCCTCTGCGGCACCCTCAACGGCTTCGACGACGACGCGCTCCGCCGCCTCCAACACCCCGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGTGGATGGCTCGGAGGGTGCAGGAGACGGTGTGC-GGCGCGCCCTGTGTATGTAGCGGCTGTCGATCTTGCATGTTCTGAAGAGTTCCTGGAGCTTATTAAGAGTGCACTTCTGGCAGCTCTAGAAGCTCTGATTCCAGGCTCCCTGTTTGGGCTTATGACGTTCAGTCACAAGATTGGACTGTATGATGTACAAGGTCCAATTCCAGTTGTAAAAAATGTTTTCATCCCTCCAGACACAGAAGAAGATGGGCTG-CCTGTTGCCCTTGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTATCGACACATGCAAAGATCGAATTGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGGGCAGGAACCTGATACTGTTTTGCTTGGTGGCCGAGGTTTTGGAACAGCCATGTCTGCTCTAACTGACTACCTAAGTTCAGAGTATGGAACTACTTTTGCTTTGGCTAGGGTATTTGCTTTTCTGTCTGGTGCTCCTGATTATGGAGATGGTCAACTAGACACTAGGAGATATGGTGAACAATATGCTAGCAAA-GGGGAAGACCCTGACCTTGCATTACTTCCTGAACAGATACCATTTTATAAAGACCTGGCAGCTGTCGCTGTTCAAGCAGGAGTATGTGTAGACATATTTGCTATAACCGACGAATACACCGATTTGGCTTCGTTGAAGTTTTTAAGTATTGAAAGTGGTGGCTCATTGTTTCTGTATACAAATACAGACGATTCAACACTTCCCCAGGACATATATCGCTTATTGAGTAGACCCTATGCATTTGGTTGTGTTCTAAGGTTGAGAACATCTTCAGATTTTGAACCTGGCAATTCTTATGGCCATTTCTTCCCTGATCCTCAATATGAACATGTGCAACATATCATCTGCTGCGATTCATTTGCTACTTATGCATATGACTTTAACTTTTCACACCCTGAGGGCTTTTCCAGGCACACAGATCCTGCTGTTGTACAAATTGCATTTCAGTATAGTGTTATTGAACCTGTCAAGCATACATCAGAGAATGAAACACAATCATCTACAAGTAACATGTTTTGTCTAAAGAGGCGGTTGAGAATAAGGACATTGCAGTATCGACCAGCTAAAAATATCAACGAAATATATGACAGTGTTGATCCAGAGACTCTCCTACATATTCTAGTACATAAGGTTATTTTAATTTCATTGGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGCTCGGTATAATCAGGCATTGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTTGACTTCTTACAGTGCCCACAGCTGCAAATGTTACCTCAGCTTGTGTTTGCATTGTTAAGGAACCCTCTTC-TTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGTGCCCTGGAGCCATCTTCTCTAGCCAAAGCTATATACCCAGTTTTAGTTTCATACTCGTCACCCGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTCTAATCATGAGTGAGAGCCCCATATTTCTT-CTGGATGCATTTACGAACCTTATTGTTTACTATTCACCGTCTGCTGATCCTTCACTTCCTTTTCCTCCACCTCATGACTGTC-TTTTGAGAACCATGATTAATGAGTTGAAGCAGGGCAGGTGTATAACACCAAAGCTGACATT-TATCCATGGAGGACGAGAAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT-GCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGT-TGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGTACCTCTTTTATTTTGTATACTCTTTTTGTTACGGAACACAGCGATACAAAGAATAACACATCAGATTTATACAGTATAAGTAAAATGATTAATTATATTGTTCAAAAAAAAGGGAAAAAAAAAACTTTATGGA] [+] EMBL CB635923 [GCCTCGCGATGGCGGCGCGCGCTACGTTCTCCCGCTTCCCCGTGACGGCGGAGGCGCTGGAGGCGTGCGCCGTGCAGTGGGGCATCGCCGTGACGCCCTTCGCCGCCGCCGACGAGCGCGGCCAGGCGCCGGCCGCGGGCGCCGGCGGCGACCGGGTCCCGCGCTGCGAGCACTGCTGGGCCTACCTGAACAGCCACTGCGACATGGAGCGCTGGGGCTGGTCCTGCGCCCTCTGCGGCACCCTCAACGGCTTCGACGACGACGCGCTCCGCCGCCTCCAACACCCCGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGTGGATGGCTTGGAGGGTGCAGGAGACGGTGTGCAGGCGCGCCCTGTGTATGTAGCGGCTGTCGATCTTGCATGTTCTGAAGAGTTCCTGGAGCTTATTAAGAGTGCACTTCTGGCAGCTCTAGAAGCTCTGATTCCAGGCTCCCTGTTTGGGCTTATGACGTTCAGTCACAAGATTGGACTGTATGATGTACAAGGTCCAATTCCAGTTGTAAAAAATGTTTTCATCCCTCCAGACACAGAAGAAGATGGGCTG CCTGTTGCCCTTGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTATCGACACATGCAAAGATCGAATTGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGGGCAGGAACCTGATACTGTTTTGCTTGGTGGCCGAGGTTTTGGAACAGCCATGTCTGCTC ] [+] EMBL CB629543 [GCCTCGCGATGGCGGCGCGCGCTACGTTCTCCCGCTTCCCCGTGACGGCGGAGGCGCTGGAGGCGTGCGCCGTGCAGTGGGGCATCGCCGTGACGCCCTTCGCCGCCGCCGACGAGCGCGGCCAGGCGCCGGCCGCGGGCGCCGGCGGCGACCGGGTCCCGCGCTGCGAGCACTGCTGGGCCTACCTGAACAGCCACTGCGACATGGAGCGCTGGGGCTGGTCCTGCGCCCTCTGCGGCACCCTCAACGGCTTCGACGACGACGCGCTCCGCCGCCTCCAACACCCCGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGTGGATGGCTTGGAGGGTGCAGGAGACGGTGTGCAGGCGCGCCCTGTGTATGTAGCGGCTGTCGATCTTGCATGTTCTGAAGAGTTCCTGGAGCTTATTAAGAGTGCACTTCTGGCAGCTCTAGAAGCTCTGATTCCAGGCTCCCTGTTTGGGCTTATGACGTTCAGTCACAAGATTGGACTGTATGATGTACAAGGTCCAATTCCAGTTGTAAAAAATGTTTTCATCCCTCCAGACACAGAAGAAGATGGGCTG CCTGTTGCCCTTGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTATCGACACATGCAAAGATCGAATTGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGGGCANGA ] [+] EMBL CF305912 [ GCACCCTCAACGGCTTCGACGACGACGCGCTCCGCCGCCTCCAACACCCCGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGTGGATGGCTCGGAGGGTGCAGGAGACGGTGTGC TGCTCGTTCTGTGTATGTAGCGGCTGTCGATCTTGCATGTTCTGAATAGTTCCTGGAGCTTATTAAGAGTGCACTTCTGGCAGCTCTAGAAGCTCTGATTCCAGGCTCCCTGTTTGGGCTTATGACGTTCAGTCACAAGATTGGACTGTATGATGTACAAGGTCCAATTCCAGTTGTAAAAAATGTTTTCATCCCTCCAGACACAGAAGAAGATGGGCTG CCTGTTGCCCTTGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTATCGACACATGCAAAGATCGAATTGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGGGCAGGAACCTGATACT ] [+] EMBL CF306064 [ GCACCCTCAACGGCTTCGACGACGACGCGCTCCGCCGCCTCCAACACCCCGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGTGGATGGCTCGGAGGGTGCAGGAGACGGTGTTCTTGTTCGCCCTGTGTATGTAGCGGCTGTCGATCTTGCATGTTTTTTTTAGTTCCTGGAGCTTATTAAGAGTGCACTTCTGGCAGCTCTAGAAGCTCTGATTCCAGGCTCCCTGTTTGGGCTTATGACGTTCAGTCACAAGATTGGACTGTATGATGTACAAGGTCCAATTCCAGTTGTAAAAAATGTTTTCATCCCTCCAGACACAGAAGAAGATGGGCTG CCTGTTGCCCTTGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTATCGACACATGCAAAGATCGAATTGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGGGCAGGAACCTGATACTGTTTTGCTTGGTGGCCGAGGTTTTGGAACAGCCATGTCTGCTCTAACTGACTACCTAAGTTCAGAGTATGGAACTACTTTTGCTTTGGCTAGGGTATTTGCTTTTCTGTCTGGTGCTCCTGATTATGGA ] [+] EMBL CF303319 [ cacgaGGCTTCGACGACGACGCGCTCCGCCGCCTCCAACACCCCGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGTGGATGGCTCGGAGGGTGCAGGAGACGGTGTGCAGGCGCGCCCTGTGTATGTAGCGGCTGTCGATCTTGCATGTTCTGAAGAGTTCCTGGAGCTTATTAAGAGTGCACTTCTGGCAGCTCTAGAAGCTCTGATTCCAGGCTCCCTGTTTGGGCTTATGACGTTCAGTCACAAGATTGGACTGTATGATGTACAAGGTCCAATTCCAGTTGTAAAAAATGTTTTCATCCCTCCAGACACAGAAGAAGATGGGCTG CCTGTTGCCCTTGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTATCGACACATGCAAAGATCGAATTGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGGGCAGGAACCTGATACTGTTTTGCTTGGTGGCCGAGGTTTTGGAACAGCCATGTCTGCTCTAACTGACTACCTAAGTTCAGAGTATGGAACTACTTTTGCTTTGGCTAGGGTATTTGCTTTTCTGTCTGGTGCTCCTGATTATGGAGATGGTCAACTAGACACTAGGAGATATGGTGAACAATATGCTAGCAAAGGGGGAAGACCCTGACCTTGCATTACTTCCTGAACAGATACCATTTTATAAAG ] [+] EMBL CB670770 [ GGCTGCCCCCTTGCCCTTGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTATCGACACATGCAAAGATCGAATTGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGGGCAGGAACCTGATACTGTTTTGCTTGGTGGCCGAGGTTTTGGAACAGCCATGTCTGCTCTAACTGACTACCTAAGTTCAGAGTATGGAACTACTTTTGCTTTGGCTAGGGTATTTGCTTTTCTGTCTGGTGCTCCTGATTATGGAGATGGTCAACTAGACACTAGGAGATATGGTGAACAATATGCTAGCAAA GGGGAAGACCCTGACCTTGCATTACTTCCTGAACAGATACCATTTTATAAAGACCTGGCAGCTGTCGCTGTTCAAGCAGGAGTATGTGTAGACATATTTGCTATAACCGACGAATACACCGATTTGGCTTCGTTGAAGTTTTTAAGTATTGAAAGTGGTGGCTCATTGTTTCTGTATACAAATACAGACGATTCAACACTTCCCCAGGACATATATCGCTTATTGAGTAGACCCTATGCATTTGGTTGTGTTCTAAGGTTGAGAACATCTTCAGATTTTGAACCTGGCAATTCTTATGGCCATTTCTTCCCTGATCCTCAATATGAACATGTGCAACATATCATCTGCTGCGATTCATTTGCTACTTATGCATATGACTTTAACTTTTCACACCCTGAGGGCTTTTCCAGGCACACAGATC ] [+] EMBL CB621505 [ ACTAGCCACTAGGAGATATGGTGAACAATATGCTAGCAAA GGGGAAGACCCTGACCTTGCATTACTTCCTGAACAGATACCATTTTATAAAGACCTGGCAGCTGTCGCTGTTCAAGCAGGAGTATGTGTAGACATATTTGCTATAACCGACGAATACACCGATTTGGCTTCGTTGAAGTTTTTAAGTATTGAAAGTGGTGGCTCATTGTTTCTGTATACAAATACAGACGATTCAACACTTCCCCAGGACATATATCGCTTATTGAGTAGACCCTATGCATTTGGTTGTGTTCTAAGGTTGAGAACATCTTCAGATTTTGAACCTGGCAATTCTTATGGCCATTTCTTCCCTGATCCTCAATATGAACATGTGCAACATATCATCTGCTGCGATTCATTTGCTACTTATGCATATGACTTTAACTTTTCACACCCTGAGGGCTTTTCCAGGCACACAGATCCTGCTGTTGTACAAATTGCATTTCAGTATAGTGTTATTGAACCTGTCAAGCATACATCAGAGAATGAAACACAATCATCTACAAGTAACATGTTTTGTCTAAAGAGGCGGTTGAGAATAAGGACATTGCAGTATCGACCAGCTAAAAATATCAACGAAATATATGACAGTGTTGATCCAGAGACTCTCCTACATATTCTAGTACATAAGGTTATTTTAATTTCATTGGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGCTCGGTATAATCAGGCATTGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTT ] [+] EMBL CB000021 [ CTGCTGTTGTACAAATTGCATTTCAGTATAGTGCTATTGAACCTGTCAAGCATACATCAGAGAATGAAACACAATCATCTACAAGTAACATGTTTTGTCTAAAGAGGCGGTTGAGAATAAGGACATTGCAGTATCGACCAGCTAAAAATATCAACGAAATATATGACAGTGTTGATCCAGAGACTCTCCTACATATTCTAGTACATAAGGTTATTTTAATTTCATTGGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGCTCGGTATAATCAGGCATTGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTTGACTTCTTACAGTGCCCACAGCTGCAAATGTTACCTCAGCTTGTGTTTGCATTGTTAAGGAACCCTCTTC TTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGTGCCCTGGAGCCATCTTCTCTAGCCAAAGCTATATACCCAGTTTTAGTTTCATACTCGTCACCCGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTCTAATCATGAGTGAGAGCCCCACATTTCTT CTGGATGCATTTACGAACCTTATTGTTTACTATTCACCGTCTGCTGATCCTTCACTTCCTTTGCCTCCACCTCATGACTGTC TTTTG ] [+] EMBL CB000496 [ TGCTGTTGTACAAATTGCATTTCAGTATAGTGTTATTGAACCTGTCAAGCATACATCAGAGAATGAAACACAATCATCTACAAGTAACATGTTTTGTCTAAAGAGGCGGTTGAGAATAAGGACATTGCAGTATCGACCAGCTAAAAATATCAACGAAATATATGACAGTGTTGATCCAGAGACTCTCCTACATATTCTAGTACATAAGGTTATTTTAATTTCATTGGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGCTCGGTATAATCAGGCATTGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTTGACTTCTTACAGTGCCCACAGCTGCAAATGTTACCTCAGCTTGTGTTTGCATTGTTAAGGAACCCTCTTC TTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGTGCCCTGGAGCCATCTTCTCTAGCCAAAGCTATATACCCAGTTTTAGTTTCATACTCGTCACCCGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTCT ] [-] EMBL CB670771 [ AGGAACCCTCTTCTTTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGTGCCCTGGAGCCATCTTCTCTAGCCAAAGCTATATACCCAGTTTTAGTTTCATACTCGTCACCCGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTCTAATCATGAGTGAGAGCCCCATATTTCTT CTGGATGCATTTACGAACCTTATTGTTTACTATTCACCTTCTGCTGATCCTTCACTTCCTTTTCCTCCACCTCATGACTGTC TTTTGAGAACCATGGTTAATGAGTTGAAGCAGGGCAGGTGTATAACACCAAAGCTGACATT TATCCATGGAGGACGAGAAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT GCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGT TGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGTACCTCTTTTATTTTGTATACTCTTTTTGTTACGGAACACAGCGATACAAAGAATAACACATCAGATTTATACAGTATAAGTAAAATGATTAATTATAT ] [-] EMBL CB635924 [ AAGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGTGCCCTGGAGCCATCTTCTCTAGCCAAAGCTATATACCCAGTTTTAGTTTCATACTCGTCACCTGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTCTAATCATGAGTGAGAGCCCCATATTTCTT CTGGATGCATTTACGAACCTTATTGTTTACTATTCACCGTCTGCTGATCCTTCACTTCCTTTTCCTCCACCTCATGACTGTC TTTTGAGAACCATGATTAATGAGTTGAAGCAGGGCAGGTGTATAACACCAAAGCTGACATT TATCCATGGAGGACGAGAAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT GCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGT TGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGTACCTCTTTTATTTTGTATACTCTTTTTGTTACGGAACACAGCGATACAAAGAATAACACATGAGATTTATACAGTATAAGTAAAATGATTAATTAaaaaaaaga ] [-] EMBL CB621506 [ AGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGTGCCCTGGAGCCATCTTCTCTAGCCAAAGCTATATACCCAGTTTTAGTTTCATACTCGTCACCTGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTCTAATCATGAGTGAGAGCCCCATATTTCTT CTGGATGCATTTACGAACCTTATTGTTTACTATTCACCGTCTGCTGATCCTTCACTTCCTTTTCCTCCACCTCATGACTGTC TTTTGAGAACCATGATTAATGAGTTGAAGCAGGGCAGGTGTATAACACCAAAGCTGACATT TATCCATGGAGGACGAGAAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT GCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATAT ATATAGCCTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGT TGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGGACCTCTTTTATTTTGTATACTCTTTTTGTTACGGAACACAGCGATACAAAGAATAACACATCAGCTTTAAAGAGTATAAGTAAAATGATTAATTATATTGTTCCCTTAAAAGGGA ] [-] EMBL CB629544 [ TTTCATACTGGTCACCGGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTTTAATCATGAGTGAGAGCCCCATATTTCTT TTGGATGCATTTACGACCCTTATTGTTTACTATTCCCCGTCTGCGGATCCTTCACTTCCTTTTCCTCCCCCTCATGACTGTC TTTTGAGAACCATGATTAATGAGTTGAAGCAGGGCAGGTGTATAACCCCAAAGCTGCCATT TATCCATGGAGGACGAGAAGATCCAGCATTGTTTGAGAGGTATTTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT GCTGCAACAGACATCATGGAGACAGAAAGTAGTATTTAGTTCAAGACGTAGCCCAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATACCCTTCATTCCTTCATATAGATATACCCTTGGAGCAATAAAAGGGGAGGGGATTTTTTGGCATCATAGT TCCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGTCCCTCTTTTATTTTGTATGCTCTTTTTGTTACGGAACCCAGCGATACAAAGAATAACCCATCAGATTTATCCAGTATAAGTAAAATGAAAGATTATATTGTTCAAAAAAAAAAAAAAAAAAAAACTTTATGGA] [+] EMBL BI808609 [ ATCAGGAGTGAGACCCCCATATTTCTTCCTGGAT CATTTACGAACCTTGT TTTACTATTCACCGTCT CTGATCCTTCACTTCCTGTCCGTCCACCTCATGACT TCTTTTTGAG ACCATGATTAATGAGTTGAA CAGGGCAGGTGTATAACACC AAGCTGACATTGTATCCATGGAGGACGAGAAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCATGGCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCC AAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGC ATAAAAGGGGAGGGGATCTTCTGGCATCATAGTCCGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGTACCTCTTTTATTTTGTATACTCTTTTTGTTACGGAACACAGCGATAC AAGAATAACACATCAGATTTATACAGTATA ] [-] EMBL AU225921 [ CATGACTGTC TTTTGAGAACCATGGTTAATGAGTTGAAGCAGGGCAGGTGTATAACACCAAAGCTGACATT TATCCATGGAGGACGANNAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT GCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGT TGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGTACCTCTTTTATTTTGTATACTCTTTTTGTTACGGAACACAGCGATACAAAGAATAACACATCAGATTagcggc ] [+] EMBL BM039004 [ CGAGAAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT GCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGT TGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGTACCTCTTTTATTTTGTATACTCTTTTTGTTACGGAACACAGCGATAC AAGAATAACACATCAGATTTATACAGTATAAGTAAAATGATTAATTATATTGTTCAAAAA ] [-] EMBL CA882868 [ CAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT GCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGT TGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGT ] [-] EMBL CA882866 [ CAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT GCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGT TGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGT ] consensusID : consensus_15132#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 565 fasta sequence [CTTATTGAGTAGACCCTATGCATTTGGTTGTGTTCTAAGGTTGAGAACATCTTCAGATTTTGAACCTGGCAATTCTTATGGCCATTTCTTCCCTGATCCTCAATATGAACATGTGCAACATATCATCTGCTGCGATTCATTTGCTACTTATGCATATGACTTTAACTTTTCACACCCTGAGGGCTTTTCCAGGCACACAGATCCTGCTGTTGTACAAATTGCATTTCAGTATAGTGTTATTGAACCTGTCAAGCATACATCAGAGAATGAAACACAATCATCTACAAGGTTATTTTAATTTCATTGGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGCTCGGTATAATCAGGCATTGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTTGACTTCTTACAGTGCCCACAGCTGCAAATGTTACCTCAGCTTGTGTTTGCATTGTTAAGGAACCCTCTTCTTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGTGCCCTGGAGC] [+] EMBL CF304031 [CTTATTGAGTAGACCCTATGCATTTGGTTGTGTTCTAAGGTTGAGAACATCTTCAGATTTTGAACCTGGCAATTCTTATGGCCATTTCTTCCCTGATCCTCAATATGAACATGTGCAACATATCATCTGCTGCGATTCATTTGCTACTTATGCATATGACTTTAACTTTTCACACCCTGAGGGCTTTTCCAGGCACACAGATCCTGCTGTTGTACAAATTGCATTTCAGTATAGTGTTATTGAACCTGTCAAGCATACATCAGAGAATGAAACACAATCATCTACAAGGTTATTTTAATTTCATTGGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGCTCGGTATAATCAGGCATTGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTTGACTTCTTACAGTGCCCACAGCTGCAAATGTTACCTCAGCTTGTGTTTGCATTGTTAAGGAACCCTCTTCTTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGTGCCCTGGAGC] consensusID : consensus_15132#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 263 fasta sequence [AGGTATGCTTTATTGAAGAGCAAGATGTTGGCGGGACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCATGCTGCAGACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACCATTCAGCTCCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCCAATAAAAGGGGAGGGGATCTTCTGGCCAAAAAAAAAA] [+] EMBL BI813502 [AGGTATGCTTTATTGAAGAGCAAGATGTTGGCGGGACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCATGCTGCAGACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACCATTCAGCTCCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCCAATAAAAGGGGAGGGGATCTTCTGGCCAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15132#0 GCCTCGCGATGGCGGCGCGCGCTACGTTCTCCCGCTTCCCCGTGACGGCGGAGGCGCTGG 60 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 AGGCGTGCGCCGTGCAGTGGGGCATCGCCGTGACGCCCTTCGCCGCCGCCGACGAGCGCG 120 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 GCCAGGCGCCGGCCGCGGGCGCCGGCGGCGACCGGGTCCCGCGCTGCGAGCACTGCTGGG 180 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 CCTACCTGAACAGCCACTGCGACATGGAGCGCTGGGGCTGGTCCTGCGCCCTCTGCGGCA 240 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 CCCTCAACGGCTTCGACGACGACGCGCTCCGCCGCCTCCAACACCCCGAAGGGTGGCCTG 300 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 AGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGTGGATGGCTCGGAGGGTGCAGGAG 360 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 ACGGTGTGCGGCGCGCCCTGTGTATGTAGCGGCTGTCGATCTTGCATGTTCTGAAGAGTT 420 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 CCTGGAGCTTATTAAGAGTGCACTTCTGGCAGCTCTAGAAGCTCTGATTCCAGGCTCCCT 480 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 GTTTGGGCTTATGACGTTCAGTCACAAGATTGGACTGTATGATGTACAAGGTCCAATTCC 540 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 AGTTGTAAAAAATGTTTTCATCCCTCCAGACACAGAAGAAGATGGGCTGCCTGTTGCCCT 600 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 TGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTATCGACACATGCAAAGATCGAAT 660 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 TGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGG 720 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 GCAGGAACCTGATACTGTTTTGCTTGGTGGCCGAGGTTTTGGAACAGCCATGTCTGCTCT 780 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 AACTGACTACCTAAGTTCAGAGTATGGAACTACTTTTGCTTTGGCTAGGGTATTTGCTTT 840 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 TCTGTCTGGTGCTCCTGATTATGGAGATGGTCAACTAGACACTAGGAGATATGGTGAACA 900 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 ATATGCTAGCAAAGGGGAAGACCCTGACCTTGCATTACTTCCTGAACAGATACCATTTTA 960 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 TAAAGACCTGGCAGCTGTCGCTGTTCAAGCAGGAGTATGTGTAGACATATTTGCTATAAC 1020 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 CGACGAATACACCGATTTGGCTTCGTTGAAGTTTTTAAGTATTGAAAGTGGTGGCTCATT 1080 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 GTTTCTGTATACAAATACAGACGATTCAACACTTCCCCAGGACATATATCGCTTATTGAG 1140 consensus_15132#1 ---------------------------------------------------CTTATTGAG 9 consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 TAGACCCTATGCATTTGGTTGTGTTCTAAGGTTGAGAACATCTTCAGATTTTGAACCTGG 1200 consensus_15132#1 TAGACCCTATGCATTTGGTTGTGTTCTAAGGTTGAGAACATCTTCAGATTTTGAACCTGG 69 consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 CAATTCTTATGGCCATTTCTTCCCTGATCCTCAATATGAACATGTGCAACATATCATCTG 1260 consensus_15132#1 CAATTCTTATGGCCATTTCTTCCCTGATCCTCAATATGAACATGTGCAACATATCATCTG 129 consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 CTGCGATTCATTTGCTACTTATGCATATGACTTTAACTTTTCACACCCTGAGGGCTTTTC 1320 consensus_15132#1 CTGCGATTCATTTGCTACTTATGCATATGACTTTAACTTTTCACACCCTGAGGGCTTTTC 189 consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 CAGGCACACAGATCCTGCTGTTGTACAAATTGCATTTCAGTATAGTGTTATTGAACCTGT 1380 consensus_15132#1 CAGGCACACAGATCCTGCTGTTGTACAAATTGCATTTCAGTATAGTGTTATTGAACCTGT 249 consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 CAAGCATACATCAGAGAATGAAACACAATCATCTACAAGTAACATGTTTTGTCTAAAGAG 1440 consensus_15132#1 CAAGCATACATCAGAGAATGAAACACAATCATCTACAAG--------------------- 288 consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 GCGGTTGAGAATAAGGACATTGCAGTATCGACCAGCTAAAAATATCAACGAAATATATGA 1500 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 CAGTGTTGATCCAGAGACTCTCCTACATATTCTAGTACATAAGGTTATTTTAATTTCATT 1560 consensus_15132#1 -------------------------------------------GTTATTTTAATTTCATT 305 consensus_15132#2 ----------------------------------------------AGGTATGCTTTATT 14 * * ** *** consensus_15132#0 GGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGC 1620 consensus_15132#1 GGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGC 365 consensus_15132#2 GAA-GAGCAAGATGTTGGCGGGACAGGGTTTACAAGTGGTAAAGGGTTTGTA-TCGTTCC 72 * * * ** * * ** * * * ** * ** * ** * * * * * consensus_15132#0 TCGGTATAATCAGGCAT--TGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTT 1678 consensus_15132#1 TCGGTATAATCAGGCAT--TGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTT 423 consensus_15132#2 GTGAGAGCATCAGGCATGCTGCAGACAGACATCATCGAGACAGAAAGTAGTATCTAGTTC 132 * * ********* ** * ** ***** * * * * consensus_15132#0 GACTTCTTACAGTGCCCACAGCTGCAAATGTTACCTCAGCTTGTGTTTGCATTGTTAAGG 1738 consensus_15132#1 GACTTCTTACAGTGCCCACAGCTGCAAATGTTACCTCAGCTTGTGTTTGCATTGTTAAGG 483 consensus_15132#2 AAGACGTAGCACCATTCAGCTCCCAAAATCATGGAGTAGATTGTATG-AAGTCATCATAG 191 * * ** ** * **** * ** **** * * * * * consensus_15132#0 AACCCTCTTCTTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAA 1798 consensus_15132#1 AACCCTCTTCTTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAA 543 consensus_15132#2 CCTTCATTCCTTCA----TATAGATATAGCCTTGGAGCCAATAAAAGGGGAGG---GGAT 244 * * ***** ** * * ** ** * ** * *** * * * consensus_15132#0 TGCCTTTTCAGTGCCCTGGAGCCATCTTCTCTAGCCAAAGCTATATACCCAGTTTTAGTT 1858 consensus_15132#1 TGCCTTTTCAGTGCCCTGGAGC-------------------------------------- 565 consensus_15132#2 CTTCTGGCCAAAAAAAAAA----------------------------------------- 263 ** ** consensus_15132#0 TCATACTCGTCACCCGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTCTA 1918 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 ATCATGAGTGAGAGCCCCATATTTCTTCTGGATGCATTTACGAACCTTATTGTTTACTAT 1978 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 TCACCGTCTGCTGATCCTTCACTTCCTTTTCCTCCACCTCATGACTGTCTTTTGAGAACC 2038 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 ATGATTAATGAGTTGAAGCAGGGCAGGTGTATAACACCAAAGCTGACATTTATCCATGGA 2098 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 GGACGAGAAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGT 2158 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 ACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCATGCTGCA 2218 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 ACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCA 2278 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 AAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGC 2338 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 CTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGTTGCCTGTGTGTCTGTGTC 2398 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 ACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGTACCTCTTTTATTTTGTA 2458 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 TACTCTTTTTGTTACGGAACACAGCGATACAAAGAATAACACATCAGATTTATACAGTAT 2518 consensus_15132#1 ------------------------------------------------------------ consensus_15132#2 ------------------------------------------------------------ consensus_15132#0 AAGTAAAATGATTAATTATATTGTTCAAAAAAAAGGGAAAAAAAAAACTTTATGGA 2574 consensus_15132#1 -------------------------------------------------------- consensus_15132#2 -------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||