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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15132#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 2574 fasta sequence
[GCCTCGCGATGGCGGCGCGCGCTACGTTCTCCCGCTTCCCCGTGACGGCGGAGGCGCTGGAGGCGTGCGCCGTGCAGTGGGGCATCGCCGTGACGCCCTTCGCCGCCGCCGACGAGCGCGGCCAGGCGCCGGCCGCGGGCGCCGGCGGCGACCGGGTCCCGCGCTGCGAGCACTGCTGGGCCTACCTGAACAGCCACTGCGACATGGAGCGCTGGGGCTGGTCCTGCGCCCTCTGCGGCACCCTCAACGGCTTCGACGACGACGCGCTCCGCCGCCTCCAACACCCCGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGTGGATGGCTCGGAGGGTGCAGGAGACGGTGTGC-GGCGCGCCCTGTGTATGTAGCGGCTGTCGATCTTGCATGTTCTGAAGAGTTCCTGGAGCTTATTAAGAGTGCACTTCTGGCAGCTCTAGAAGCTCTGATTCCAGGCTCCCTGTTTGGGCTTATGACGTTCAGTCACAAGATTGGACTGTATGATGTACAAGGTCCAATTCCAGTTGTAAAAAATGTTTTCATCCCTCCAGACACAGAAGAAGATGGGCTG-CCTGTTGCCCTTGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTATCGACACATGCAAAGATCGAATTGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGGGCAGGAACCTGATACTGTTTTGCTTGGTGGCCGAGGTTTTGGAACAGCCATGTCTGCTCTAACTGACTACCTAAGTTCAGAGTATGGAACTACTTTTGCTTTGGCTAGGGTATTTGCTTTTCTGTCTGGTGCTCCTGATTATGGAGATGGTCAACTAGACACTAGGAGATATGGTGAACAATATGCTAGCAAA-GGGGAAGACCCTGACCTTGCATTACTTCCTGAACAGATACCATTTTATAAAGACCTGGCAGCTGTCGCTGTTCAAGCAGGAGTATGTGTAGACATATTTGCTATAACCGACGAATACACCGATTTGGCTTCGTTGAAGTTTTTAAGTATTGAAAGTGGTGGCTCATTGTTTCTGTATACAAATACAGACGATTCAACACTTCCCCAGGACATATATCGCTTATTGAGTAGACCCTATGCATTTGGTTGTGTTCTAAGGTTGAGAACATCTTCAGATTTTGAACCTGGCAATTCTTATGGCCATTTCTTCCCTGATCCTCAATATGAACATGTGCAACATATCATCTGCTGCGATTCATTTGCTACTTATGCATATGACTTTAACTTTTCACACCCTGAGGGCTTTTCCAGGCACACAGATCCTGCTGTTGTACAAATTGCATTTCAGTATAGTGTTATTGAACCTGTCAAGCATACATCAGAGAATGAAACACAATCATCTACAAGTAACATGTTTTGTCTAAAGAGGCGGTTGAGAATAAGGACATTGCAGTATCGACCAGCTAAAAATATCAACGAAATATATGACAGTGTTGATCCAGAGACTCTCCTACATATTCTAGTACATAAGGTTATTTTAATTTCATTGGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGCTCGGTATAATCAGGCATTGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTTGACTTCTTACAGTGCCCACAGCTGCAAATGTTACCTCAGCTTGTGTTTGCATTGTTAAGGAACCCTCTTC-TTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGTGCCCTGGAGCCATCTTCTCTAGCCAAAGCTATATACCCAGTTTTAGTTTCATACTCGTCACCCGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTCTAATCATGAGTGAGAGCCCCATATTTCTT-CTGGATGCATTTACGAACCTTATTGTTTACTATTCACCGTCTGCTGATCCTTCACTTCCTTTTCCTCCACCTCATGACTGTC-TTTTGAGAACCATGATTAATGAGTTGAAGCAGGGCAGGTGTATAACACCAAAGCTGACATT-TATCCATGGAGGACGAGAAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT-GCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGT-TGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGTACCTCTTTTATTTTGTATACTCTTTTTGTTACGGAACACAGCGATACAAAGAATAACACATCAGATTTATACAGTATAAGTAAAATGATTAATTATATTGTTCAAAAAAAAGGGAAAAAAAAAACTTTATGGA]
[+] EMBL CB635923 [GCCTCGCGATGGCGGCGCGCGCTACGTTCTCCCGCTTCCCCGTGACGGCGGAGGCGCTGGAGGCGTGCGCCGTGCAGTGGGGCATCGCCGTGACGCCCTTCGCCGCCGCCGACGAGCGCGGCCAGGCGCCGGCCGCGGGCGCCGGCGGCGACCGGGTCCCGCGCTGCGAGCACTGCTGGGCCTACCTGAACAGCCACTGCGACATGGAGCGCTGGGGCTGGTCCTGCGCCCTCTGCGGCACCCTCAACGGCTTCGACGACGACGCGCTCCGCCGCCTCCAACACCCCGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGTGGATGGCTTGGAGGGTGCAGGAGACGGTGTGCAGGCGCGCCCTGTGTATGTAGCGGCTGTCGATCTTGCATGTTCTGAAGAGTTCCTGGAGCTTATTAAGAGTGCACTTCTGGCAGCTCTAGAAGCTCTGATTCCAGGCTCCCTGTTTGGGCTTATGACGTTCAGTCACAAGATTGGACTGTATGATGTACAAGGTCCAATTCCAGTTGTAAAAAATGTTTTCATCCCTCCAGACACAGAAGAAGATGGGCTG CCTGTTGCCCTTGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTATCGACACATGCAAAGATCGAATTGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGGGCAGGAACCTGATACTGTTTTGCTTGGTGGCCGAGGTTTTGGAACAGCCATGTCTGCTC ]
[+] EMBL CB629543 [GCCTCGCGATGGCGGCGCGCGCTACGTTCTCCCGCTTCCCCGTGACGGCGGAGGCGCTGGAGGCGTGCGCCGTGCAGTGGGGCATCGCCGTGACGCCCTTCGCCGCCGCCGACGAGCGCGGCCAGGCGCCGGCCGCGGGCGCCGGCGGCGACCGGGTCCCGCGCTGCGAGCACTGCTGGGCCTACCTGAACAGCCACTGCGACATGGAGCGCTGGGGCTGGTCCTGCGCCCTCTGCGGCACCCTCAACGGCTTCGACGACGACGCGCTCCGCCGCCTCCAACACCCCGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGTGGATGGCTTGGAGGGTGCAGGAGACGGTGTGCAGGCGCGCCCTGTGTATGTAGCGGCTGTCGATCTTGCATGTTCTGAAGAGTTCCTGGAGCTTATTAAGAGTGCACTTCTGGCAGCTCTAGAAGCTCTGATTCCAGGCTCCCTGTTTGGGCTTATGACGTTCAGTCACAAGATTGGACTGTATGATGTACAAGGTCCAATTCCAGTTGTAAAAAATGTTTTCATCCCTCCAGACACAGAAGAAGATGGGCTG CCTGTTGCCCTTGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTATCGACACATGCAAAGATCGAATTGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGGGCANGA ]
[+] EMBL CF305912 [ GCACCCTCAACGGCTTCGACGACGACGCGCTCCGCCGCCTCCAACACCCCGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGTGGATGGCTCGGAGGGTGCAGGAGACGGTGTGC TGCTCGTTCTGTGTATGTAGCGGCTGTCGATCTTGCATGTTCTGAATAGTTCCTGGAGCTTATTAAGAGTGCACTTCTGGCAGCTCTAGAAGCTCTGATTCCAGGCTCCCTGTTTGGGCTTATGACGTTCAGTCACAAGATTGGACTGTATGATGTACAAGGTCCAATTCCAGTTGTAAAAAATGTTTTCATCCCTCCAGACACAGAAGAAGATGGGCTG CCTGTTGCCCTTGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTATCGACACATGCAAAGATCGAATTGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGGGCAGGAACCTGATACT ]
[+] EMBL CF306064 [ GCACCCTCAACGGCTTCGACGACGACGCGCTCCGCCGCCTCCAACACCCCGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGTGGATGGCTCGGAGGGTGCAGGAGACGGTGTTCTTGTTCGCCCTGTGTATGTAGCGGCTGTCGATCTTGCATGTTTTTTTTAGTTCCTGGAGCTTATTAAGAGTGCACTTCTGGCAGCTCTAGAAGCTCTGATTCCAGGCTCCCTGTTTGGGCTTATGACGTTCAGTCACAAGATTGGACTGTATGATGTACAAGGTCCAATTCCAGTTGTAAAAAATGTTTTCATCCCTCCAGACACAGAAGAAGATGGGCTG CCTGTTGCCCTTGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTATCGACACATGCAAAGATCGAATTGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGGGCAGGAACCTGATACTGTTTTGCTTGGTGGCCGAGGTTTTGGAACAGCCATGTCTGCTCTAACTGACTACCTAAGTTCAGAGTATGGAACTACTTTTGCTTTGGCTAGGGTATTTGCTTTTCTGTCTGGTGCTCCTGATTATGGA ]
[+] EMBL CF303319 [ cacgaGGCTTCGACGACGACGCGCTCCGCCGCCTCCAACACCCCGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGTGGATGGCTCGGAGGGTGCAGGAGACGGTGTGCAGGCGCGCCCTGTGTATGTAGCGGCTGTCGATCTTGCATGTTCTGAAGAGTTCCTGGAGCTTATTAAGAGTGCACTTCTGGCAGCTCTAGAAGCTCTGATTCCAGGCTCCCTGTTTGGGCTTATGACGTTCAGTCACAAGATTGGACTGTATGATGTACAAGGTCCAATTCCAGTTGTAAAAAATGTTTTCATCCCTCCAGACACAGAAGAAGATGGGCTG CCTGTTGCCCTTGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTATCGACACATGCAAAGATCGAATTGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGGGCAGGAACCTGATACTGTTTTGCTTGGTGGCCGAGGTTTTGGAACAGCCATGTCTGCTCTAACTGACTACCTAAGTTCAGAGTATGGAACTACTTTTGCTTTGGCTAGGGTATTTGCTTTTCTGTCTGGTGCTCCTGATTATGGAGATGGTCAACTAGACACTAGGAGATATGGTGAACAATATGCTAGCAAAGGGGGAAGACCCTGACCTTGCATTACTTCCTGAACAGATACCATTTTATAAAG ]
[+] EMBL CB670770 [ GGCTGCCCCCTTGCCCTTGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTATCGACACATGCAAAGATCGAATTGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGGGCAGGAACCTGATACTGTTTTGCTTGGTGGCCGAGGTTTTGGAACAGCCATGTCTGCTCTAACTGACTACCTAAGTTCAGAGTATGGAACTACTTTTGCTTTGGCTAGGGTATTTGCTTTTCTGTCTGGTGCTCCTGATTATGGAGATGGTCAACTAGACACTAGGAGATATGGTGAACAATATGCTAGCAAA GGGGAAGACCCTGACCTTGCATTACTTCCTGAACAGATACCATTTTATAAAGACCTGGCAGCTGTCGCTGTTCAAGCAGGAGTATGTGTAGACATATTTGCTATAACCGACGAATACACCGATTTGGCTTCGTTGAAGTTTTTAAGTATTGAAAGTGGTGGCTCATTGTTTCTGTATACAAATACAGACGATTCAACACTTCCCCAGGACATATATCGCTTATTGAGTAGACCCTATGCATTTGGTTGTGTTCTAAGGTTGAGAACATCTTCAGATTTTGAACCTGGCAATTCTTATGGCCATTTCTTCCCTGATCCTCAATATGAACATGTGCAACATATCATCTGCTGCGATTCATTTGCTACTTATGCATATGACTTTAACTTTTCACACCCTGAGGGCTTTTCCAGGCACACAGATC ]
[+] EMBL CB621505 [ ACTAGCCACTAGGAGATATGGTGAACAATATGCTAGCAAA GGGGAAGACCCTGACCTTGCATTACTTCCTGAACAGATACCATTTTATAAAGACCTGGCAGCTGTCGCTGTTCAAGCAGGAGTATGTGTAGACATATTTGCTATAACCGACGAATACACCGATTTGGCTTCGTTGAAGTTTTTAAGTATTGAAAGTGGTGGCTCATTGTTTCTGTATACAAATACAGACGATTCAACACTTCCCCAGGACATATATCGCTTATTGAGTAGACCCTATGCATTTGGTTGTGTTCTAAGGTTGAGAACATCTTCAGATTTTGAACCTGGCAATTCTTATGGCCATTTCTTCCCTGATCCTCAATATGAACATGTGCAACATATCATCTGCTGCGATTCATTTGCTACTTATGCATATGACTTTAACTTTTCACACCCTGAGGGCTTTTCCAGGCACACAGATCCTGCTGTTGTACAAATTGCATTTCAGTATAGTGTTATTGAACCTGTCAAGCATACATCAGAGAATGAAACACAATCATCTACAAGTAACATGTTTTGTCTAAAGAGGCGGTTGAGAATAAGGACATTGCAGTATCGACCAGCTAAAAATATCAACGAAATATATGACAGTGTTGATCCAGAGACTCTCCTACATATTCTAGTACATAAGGTTATTTTAATTTCATTGGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGCTCGGTATAATCAGGCATTGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTT ]
[+] EMBL CB000021 [ CTGCTGTTGTACAAATTGCATTTCAGTATAGTGCTATTGAACCTGTCAAGCATACATCAGAGAATGAAACACAATCATCTACAAGTAACATGTTTTGTCTAAAGAGGCGGTTGAGAATAAGGACATTGCAGTATCGACCAGCTAAAAATATCAACGAAATATATGACAGTGTTGATCCAGAGACTCTCCTACATATTCTAGTACATAAGGTTATTTTAATTTCATTGGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGCTCGGTATAATCAGGCATTGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTTGACTTCTTACAGTGCCCACAGCTGCAAATGTTACCTCAGCTTGTGTTTGCATTGTTAAGGAACCCTCTTC TTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGTGCCCTGGAGCCATCTTCTCTAGCCAAAGCTATATACCCAGTTTTAGTTTCATACTCGTCACCCGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTCTAATCATGAGTGAGAGCCCCACATTTCTT CTGGATGCATTTACGAACCTTATTGTTTACTATTCACCGTCTGCTGATCCTTCACTTCCTTTGCCTCCACCTCATGACTGTC TTTTG ]
[+] EMBL CB000496 [ TGCTGTTGTACAAATTGCATTTCAGTATAGTGTTATTGAACCTGTCAAGCATACATCAGAGAATGAAACACAATCATCTACAAGTAACATGTTTTGTCTAAAGAGGCGGTTGAGAATAAGGACATTGCAGTATCGACCAGCTAAAAATATCAACGAAATATATGACAGTGTTGATCCAGAGACTCTCCTACATATTCTAGTACATAAGGTTATTTTAATTTCATTGGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGCTCGGTATAATCAGGCATTGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTTGACTTCTTACAGTGCCCACAGCTGCAAATGTTACCTCAGCTTGTGTTTGCATTGTTAAGGAACCCTCTTC TTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGTGCCCTGGAGCCATCTTCTCTAGCCAAAGCTATATACCCAGTTTTAGTTTCATACTCGTCACCCGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTCT ]
[-] EMBL CB670771 [ AGGAACCCTCTTCTTTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGTGCCCTGGAGCCATCTTCTCTAGCCAAAGCTATATACCCAGTTTTAGTTTCATACTCGTCACCCGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTCTAATCATGAGTGAGAGCCCCATATTTCTT CTGGATGCATTTACGAACCTTATTGTTTACTATTCACCTTCTGCTGATCCTTCACTTCCTTTTCCTCCACCTCATGACTGTC TTTTGAGAACCATGGTTAATGAGTTGAAGCAGGGCAGGTGTATAACACCAAAGCTGACATT TATCCATGGAGGACGAGAAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT GCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGT TGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGTACCTCTTTTATTTTGTATACTCTTTTTGTTACGGAACACAGCGATACAAAGAATAACACATCAGATTTATACAGTATAAGTAAAATGATTAATTATAT ]
[-] EMBL CB635924 [ AAGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGTGCCCTGGAGCCATCTTCTCTAGCCAAAGCTATATACCCAGTTTTAGTTTCATACTCGTCACCTGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTCTAATCATGAGTGAGAGCCCCATATTTCTT CTGGATGCATTTACGAACCTTATTGTTTACTATTCACCGTCTGCTGATCCTTCACTTCCTTTTCCTCCACCTCATGACTGTC TTTTGAGAACCATGATTAATGAGTTGAAGCAGGGCAGGTGTATAACACCAAAGCTGACATT TATCCATGGAGGACGAGAAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT GCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGT TGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGTACCTCTTTTATTTTGTATACTCTTTTTGTTACGGAACACAGCGATACAAAGAATAACACATGAGATTTATACAGTATAAGTAAAATGATTAATTAaaaaaaaga ]
[-] EMBL CB621506 [ AGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGTGCCCTGGAGCCATCTTCTCTAGCCAAAGCTATATACCCAGTTTTAGTTTCATACTCGTCACCTGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTCTAATCATGAGTGAGAGCCCCATATTTCTT CTGGATGCATTTACGAACCTTATTGTTTACTATTCACCGTCTGCTGATCCTTCACTTCCTTTTCCTCCACCTCATGACTGTC TTTTGAGAACCATGATTAATGAGTTGAAGCAGGGCAGGTGTATAACACCAAAGCTGACATT TATCCATGGAGGACGAGAAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT GCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATAT ATATAGCCTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGT TGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGGACCTCTTTTATTTTGTATACTCTTTTTGTTACGGAACACAGCGATACAAAGAATAACACATCAGCTTTAAAGAGTATAAGTAAAATGATTAATTATATTGTTCCCTTAAAAGGGA ]
[-] EMBL CB629544 [ TTTCATACTGGTCACCGGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTTTAATCATGAGTGAGAGCCCCATATTTCTT TTGGATGCATTTACGACCCTTATTGTTTACTATTCCCCGTCTGCGGATCCTTCACTTCCTTTTCCTCCCCCTCATGACTGTC TTTTGAGAACCATGATTAATGAGTTGAAGCAGGGCAGGTGTATAACCCCAAAGCTGCCATT TATCCATGGAGGACGAGAAGATCCAGCATTGTTTGAGAGGTATTTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT GCTGCAACAGACATCATGGAGACAGAAAGTAGTATTTAGTTCAAGACGTAGCCCAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATACCCTTCATTCCTTCATATAGATATACCCTTGGAGCAATAAAAGGGGAGGGGATTTTTTGGCATCATAGT TCCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGTCCCTCTTTTATTTTGTATGCTCTTTTTGTTACGGAACCCAGCGATACAAAGAATAACCCATCAGATTTATCCAGTATAAGTAAAATGAAAGATTATATTGTTCAAAAAAAAAAAAAAAAAAAAACTTTATGGA]
[+] EMBL BI808609 [ ATCAGGAGTGAGACCCCCATATTTCTTCCTGGAT CATTTACGAACCTTGT TTTACTATTCACCGTCT CTGATCCTTCACTTCCTGTCCGTCCACCTCATGACT TCTTTTTGAG ACCATGATTAATGAGTTGAA CAGGGCAGGTGTATAACACC AAGCTGACATTGTATCCATGGAGGACGAGAAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCATGGCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCC AAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGC ATAAAAGGGGAGGGGATCTTCTGGCATCATAGTCCGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGTACCTCTTTTATTTTGTATACTCTTTTTGTTACGGAACACAGCGATAC AAGAATAACACATCAGATTTATACAGTATA ]
[-] EMBL AU225921 [ CATGACTGTC TTTTGAGAACCATGGTTAATGAGTTGAAGCAGGGCAGGTGTATAACACCAAAGCTGACATT TATCCATGGAGGACGANNAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT GCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGT TGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGTACCTCTTTTATTTTGTATACTCTTTTTGTTACGGAACACAGCGATACAAAGAATAACACATCAGATTagcggc ]
[+] EMBL BM039004 [ CGAGAAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT GCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGT TGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGTACCTCTTTTATTTTGTATACTCTTTTTGTTACGGAACACAGCGATAC AAGAATAACACATCAGATTTATACAGTATAAGTAAAATGATTAATTATATTGTTCAAAAA ]
[-] EMBL CA882868 [ CAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT GCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGT TGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGT ]
[-] EMBL CA882866 [ CAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCAT GCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGT TGCCTGTGTGTCTGTGTCACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGT ]
consensusID : consensus_15132#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 565 fasta sequence
[CTTATTGAGTAGACCCTATGCATTTGGTTGTGTTCTAAGGTTGAGAACATCTTCAGATTTTGAACCTGGCAATTCTTATGGCCATTTCTTCCCTGATCCTCAATATGAACATGTGCAACATATCATCTGCTGCGATTCATTTGCTACTTATGCATATGACTTTAACTTTTCACACCCTGAGGGCTTTTCCAGGCACACAGATCCTGCTGTTGTACAAATTGCATTTCAGTATAGTGTTATTGAACCTGTCAAGCATACATCAGAGAATGAAACACAATCATCTACAAGGTTATTTTAATTTCATTGGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGCTCGGTATAATCAGGCATTGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTTGACTTCTTACAGTGCCCACAGCTGCAAATGTTACCTCAGCTTGTGTTTGCATTGTTAAGGAACCCTCTTCTTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGTGCCCTGGAGC]
[+] EMBL CF304031 [CTTATTGAGTAGACCCTATGCATTTGGTTGTGTTCTAAGGTTGAGAACATCTTCAGATTTTGAACCTGGCAATTCTTATGGCCATTTCTTCCCTGATCCTCAATATGAACATGTGCAACATATCATCTGCTGCGATTCATTTGCTACTTATGCATATGACTTTAACTTTTCACACCCTGAGGGCTTTTCCAGGCACACAGATCCTGCTGTTGTACAAATTGCATTTCAGTATAGTGTTATTGAACCTGTCAAGCATACATCAGAGAATGAAACACAATCATCTACAAGGTTATTTTAATTTCATTGGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGCTCGGTATAATCAGGCATTGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTTGACTTCTTACAGTGCCCACAGCTGCAAATGTTACCTCAGCTTGTGTTTGCATTGTTAAGGAACCCTCTTCTTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGTGCCCTGGAGC]
consensusID : consensus_15132#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 263 fasta sequence
[AGGTATGCTTTATTGAAGAGCAAGATGTTGGCGGGACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCATGCTGCAGACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACCATTCAGCTCCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCCAATAAAAGGGGAGGGGATCTTCTGGCCAAAAAAAAAA]
[+] EMBL BI813502 [AGGTATGCTTTATTGAAGAGCAAGATGTTGGCGGGACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCATGCTGCAGACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACCATTCAGCTCCCAAAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGCCTTGGAGCCAATAAAAGGGGAGGGGATCTTCTGGCCAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15132#0 GCCTCGCGATGGCGGCGCGCGCTACGTTCTCCCGCTTCCCCGTGACGGCGGAGGCGCTGG 60
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 AGGCGTGCGCCGTGCAGTGGGGCATCGCCGTGACGCCCTTCGCCGCCGCCGACGAGCGCG 120
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 GCCAGGCGCCGGCCGCGGGCGCCGGCGGCGACCGGGTCCCGCGCTGCGAGCACTGCTGGG 180
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 CCTACCTGAACAGCCACTGCGACATGGAGCGCTGGGGCTGGTCCTGCGCCCTCTGCGGCA 240
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 CCCTCAACGGCTTCGACGACGACGCGCTCCGCCGCCTCCAACACCCCGAAGGGTGGCCTG 300
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 AGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGTGGATGGCTCGGAGGGTGCAGGAG 360
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 ACGGTGTGCGGCGCGCCCTGTGTATGTAGCGGCTGTCGATCTTGCATGTTCTGAAGAGTT 420
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 CCTGGAGCTTATTAAGAGTGCACTTCTGGCAGCTCTAGAAGCTCTGATTCCAGGCTCCCT 480
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 GTTTGGGCTTATGACGTTCAGTCACAAGATTGGACTGTATGATGTACAAGGTCCAATTCC 540
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 AGTTGTAAAAAATGTTTTCATCCCTCCAGACACAGAAGAAGATGGGCTGCCTGTTGCCCT 600
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 TGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTATCGACACATGCAAAGATCGAAT 660
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 TGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGG 720
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 GCAGGAACCTGATACTGTTTTGCTTGGTGGCCGAGGTTTTGGAACAGCCATGTCTGCTCT 780
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 AACTGACTACCTAAGTTCAGAGTATGGAACTACTTTTGCTTTGGCTAGGGTATTTGCTTT 840
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 TCTGTCTGGTGCTCCTGATTATGGAGATGGTCAACTAGACACTAGGAGATATGGTGAACA 900
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 ATATGCTAGCAAAGGGGAAGACCCTGACCTTGCATTACTTCCTGAACAGATACCATTTTA 960
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 TAAAGACCTGGCAGCTGTCGCTGTTCAAGCAGGAGTATGTGTAGACATATTTGCTATAAC 1020
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 CGACGAATACACCGATTTGGCTTCGTTGAAGTTTTTAAGTATTGAAAGTGGTGGCTCATT 1080
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 GTTTCTGTATACAAATACAGACGATTCAACACTTCCCCAGGACATATATCGCTTATTGAG 1140
consensus_15132#1 ---------------------------------------------------CTTATTGAG 9
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 TAGACCCTATGCATTTGGTTGTGTTCTAAGGTTGAGAACATCTTCAGATTTTGAACCTGG 1200
consensus_15132#1 TAGACCCTATGCATTTGGTTGTGTTCTAAGGTTGAGAACATCTTCAGATTTTGAACCTGG 69
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 CAATTCTTATGGCCATTTCTTCCCTGATCCTCAATATGAACATGTGCAACATATCATCTG 1260
consensus_15132#1 CAATTCTTATGGCCATTTCTTCCCTGATCCTCAATATGAACATGTGCAACATATCATCTG 129
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 CTGCGATTCATTTGCTACTTATGCATATGACTTTAACTTTTCACACCCTGAGGGCTTTTC 1320
consensus_15132#1 CTGCGATTCATTTGCTACTTATGCATATGACTTTAACTTTTCACACCCTGAGGGCTTTTC 189
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 CAGGCACACAGATCCTGCTGTTGTACAAATTGCATTTCAGTATAGTGTTATTGAACCTGT 1380
consensus_15132#1 CAGGCACACAGATCCTGCTGTTGTACAAATTGCATTTCAGTATAGTGTTATTGAACCTGT 249
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 CAAGCATACATCAGAGAATGAAACACAATCATCTACAAGTAACATGTTTTGTCTAAAGAG 1440
consensus_15132#1 CAAGCATACATCAGAGAATGAAACACAATCATCTACAAG--------------------- 288
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 GCGGTTGAGAATAAGGACATTGCAGTATCGACCAGCTAAAAATATCAACGAAATATATGA 1500
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 CAGTGTTGATCCAGAGACTCTCCTACATATTCTAGTACATAAGGTTATTTTAATTTCATT 1560
consensus_15132#1 -------------------------------------------GTTATTTTAATTTCATT 305
consensus_15132#2 ----------------------------------------------AGGTATGCTTTATT 14
* * ** ***
consensus_15132#0 GGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGC 1620
consensus_15132#1 GGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGC 365
consensus_15132#2 GAA-GAGCAAGATGTTGGCGGGACAGGGTTTACAAGTGGTAAAGGGTTTGTA-TCGTTCC 72
* * * ** * * ** * * * ** * ** * ** * * * * *
consensus_15132#0 TCGGTATAATCAGGCAT--TGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTT 1678
consensus_15132#1 TCGGTATAATCAGGCAT--TGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTT 423
consensus_15132#2 GTGAGAGCATCAGGCATGCTGCAGACAGACATCATCGAGACAGAAAGTAGTATCTAGTTC 132
* * ********* ** * ** ***** * * * *
consensus_15132#0 GACTTCTTACAGTGCCCACAGCTGCAAATGTTACCTCAGCTTGTGTTTGCATTGTTAAGG 1738
consensus_15132#1 GACTTCTTACAGTGCCCACAGCTGCAAATGTTACCTCAGCTTGTGTTTGCATTGTTAAGG 483
consensus_15132#2 AAGACGTAGCACCATTCAGCTCCCAAAATCATGGAGTAGATTGTATG-AAGTCATCATAG 191
* * ** ** * **** * ** **** * * * * *
consensus_15132#0 AACCCTCTTCTTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAA 1798
consensus_15132#1 AACCCTCTTCTTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAA 543
consensus_15132#2 CCTTCATTCCTTCA----TATAGATATAGCCTTGGAGCCAATAAAAGGGGAGG---GGAT 244
* * ***** ** * * ** ** * ** * *** * * *
consensus_15132#0 TGCCTTTTCAGTGCCCTGGAGCCATCTTCTCTAGCCAAAGCTATATACCCAGTTTTAGTT 1858
consensus_15132#1 TGCCTTTTCAGTGCCCTGGAGC-------------------------------------- 565
consensus_15132#2 CTTCTGGCCAAAAAAAAAA----------------------------------------- 263
** **
consensus_15132#0 TCATACTCGTCACCCGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTCTA 1918
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 ATCATGAGTGAGAGCCCCATATTTCTTCTGGATGCATTTACGAACCTTATTGTTTACTAT 1978
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 TCACCGTCTGCTGATCCTTCACTTCCTTTTCCTCCACCTCATGACTGTCTTTTGAGAACC 2038
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 ATGATTAATGAGTTGAAGCAGGGCAGGTGTATAACACCAAAGCTGACATTTATCCATGGA 2098
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 GGACGAGAAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGT 2158
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 ACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCATGCTGCA 2218
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 ACAGACATCATCGAGACAGAAAGTAGTATCTAGTTCAAGACGTAGCACAATTCAGCTCCA 2278
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 AAATCATGGAGTAGATTGTATGAAGTCATCATAGCCTTCATTCCTTCATATAGATATAGC 2338
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 CTTGGAGCAATAAAAGGGGAGGGGATCTTCTGGCATCATAGTTGCCTGTGTGTCTGTGTC 2398
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 ACTGTCAGTAGCTTAACTTTGTGGCATTTCGTGTATATCCGGTACCTCTTTTATTTTGTA 2458
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 TACTCTTTTTGTTACGGAACACAGCGATACAAAGAATAACACATCAGATTTATACAGTAT 2518
consensus_15132#1 ------------------------------------------------------------
consensus_15132#2 ------------------------------------------------------------
consensus_15132#0 AAGTAAAATGATTAATTATATTGTTCAAAAAAAAGGGAAAAAAAAAACTTTATGGA 2574
consensus_15132#1 --------------------------------------------------------
consensus_15132#2 --------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||