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Oryza sativa
cluster # 15134 cluster # 15134       Sequences # 20       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15134#0 length = 634 sequences # 19  
consensus_15134#1 length = 285 sequences # 1  

consensusID : consensus_15134#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 19
consensus length = 634
fasta sequence
                              [TGACTGGACTGAAGGAGTAGAAAAAACCTTCTTCCCCAAAATCTCCAGCCACAACCAGAAGAAAGAGGCACCAGTCTGCTCAACCTATACATTTTTAGAGAGAGAAGCTGCAAAGGGTGTGTTAGAGAGAGAT-GGAGATGTGCATGGATGACAAGTGGAAGCTCACCAAGAAGGGCAGCCGA-AGGTTGGAGGAGGGCCGGGCTTCGAGAGG-CCCAT-CCCGGTCTGTGCCAGGGCGGCTGGCGAGC-C-TGGTGAAGGAGCAAAGGGCCAGGTTCT-ACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGG-CTGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAA-CAAA-TTTA-TTCG-TTTAG-TGATGA-TG-TTTGTTC-TTTC-TTTTTTTCTGAGAAAGAGAGCGATGTGCCTTTTCAGTGGCCATCCTGTGGTAGATAGTTGTTAATTTGTGTGGAAAGAATTAAATAGCTTACGTTAGCTGTTTGAGCCATCCATACAGAAATGTAAACTGTGACAAGTGTCTCTTTGAAAGACTAATACATTCCATGGTTTCTAAAAAAAAAAAAAAAAAAAAACCAAAAAAA]

[+] EMBL CF276550             [TGACTGGACTGAAGGAGTAGAAAAAACCTTCTTCCCCAAAATCTCCAGCCACAACCAGAAGAAAGAGGCACCAGTCTGCTCAACCTATACATTTTTAGAGAGAGAAGCTGCAAAGGGTGTGTTAGAGAGAGAT GGAGATGTGCATGGATGACAAGTGGAAGCTCACCAAGAAGGGCAGCCGA AGGTTGGAGGAGGGCCGGGCTTCGAGAGG CCCAT CCCGGTCTGTGCCAGGGCGGCTGGCGAGC C TGGTGAAGGAGCAAAGGGCCAGGTTCT ACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGG CTGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAA CAAA TTTA TTCG TTTAG TGATGA TGNTTTGTTC TTTC TTTTTTTCTGAGAAAGAGAGCGATGTGCCTTTTCAGTGGCCATCCTGTGGTAGATAGTTGTTAATTTGTGTGGAAAGAATTAAATAGCTTACGTTAGCTGTTTGAGCCATCCATACAGAAATGTAAACTGTGACAAGTGTCTCTTTGAAAGACTAATACATTCCATGGTTTCTAAATCAAAA                     ]
[+] EMBL CF300369             [              GAGTAGAAAAAACCTTCTTCCCCAAAATCTCCAGCCACAACCAGAAGAAAGAGGCACCAGTCTGCTCAACCTATACATTTTTAGAGAGAGAAGCTGCAAAGGGTGTGTTAGAGAGAGAT GGAGATGTGCATGGATGACAAGTGGAAGCTCACCAAGAAGGGCAGCCGA AGGTTGGAGGAGGGCCGGGCTTCGAGAGG CCCAT CCCGGTCTGTGCCAGGGCGGCTGGCGAGC C TGGTGAAGGAGCAAAGGGCCAGGTTCT ACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGG CTGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAA CAAA TTTA TTCG                                                                                                                                                                                                                                         ]
[+] EMBL CF277537             [                            TTCTTCCCCAAAATCTCCAGTCACAACCAGAAGAAAGAGGCACCAGTCTGCTCAACCTATACATTTTTAGAGAGAGAAGCTGCAAAGGGTGTGTTAGAGAGAGAT GGAGATGTGCATGGATGACAAGTGGAAGCTCACCAAGAAGGGCAGCCTATATGTTGGAGGAGGGCCGGGCTTCGAGAGG CCCAT CCCGGTCTG GTCATTGCGGCTGGCGAGC C TGGTGAAGGAGCAAAGGGCCAGGTTCT ACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGG CTGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAA CAAA TTTA TTCG TTTAG TGATGA TG TTT                                                                                                                                                                                                                     ]
[+] EMBL CF302858             [                               TTCCCCAAAATCTCCAGCCACAACCAGAAGAAAGAGGCACCAGTCTGCTCAACCTATACATTTTTAGAGAGAGAAGCTGCAAAGGGTGTGTTAGAGAGAGATGGGAGATGTGCATGGATGACAAGTGGAAGCTCACCAAGAAGGGCAGCCGA A GTTGGGAGAGGGCCGGGCTTCGAGAGG CCCAT CCCGGTCTGTGCCAGGGCGGCTGGCGAGC C TGGTGAAGGAGCAAAGGGCCAGGTTCT ACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGGNCTGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAA CAAA TTTA TTCG                                                                                                                                                                                                                                         ]
[+] EMBL AK062306             [                                TCCCCAAAATCTCCAGCCACAACCAGAAGAAAGAGGCACCAGTCTGCTCAACCTATACATTTTTAGAGAGAGAAGCTGCAAAGGGTGTGTTAGAGAGAGAT GGAGATGTGCATGGATGACAAGTGGAAGCTCACCAAGAAGGGCAGCCGA AGGTTGGAGGAGGGCCGGGCTTCGAGAGG CCCAT CCCGGTCTGTGCCAGGGCGGCTGGCGAGC C TGGTGAAGGAGCAAAGGGCCAGGTTCT ACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGG CTGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAA CAAA TTTA TTCG TTTAG TGATGA TG TTTGTTC TTTC TTTTTTTCTGAGAAAGAGAGCGATGTGCCTTTTCAGTGGCCATCCTGTGGTAGATAGTTGTTAATTTGTGTGGAAAGAATTAAATAGCTTACGTTAGCTGTTTGAGCCATCCATACAGAAATGTAAACTGTGACAAGTGTCTCTTTGAAAGACTAATACATTC                                        ]
[+] EMBL CF302195             [                                      AAATCTCCAGCCACAACCAGAAGAAAGAGGCACCAGTCTGCTCAACCTATACATTTTTAGAGAGAGAAGCTGCAAAGGGTGTGTTAGAGAGAGAT GGAGATGTGCATGGATGACAAGTGGAAGCTCACCAAGAAGGGCAGCCGA AGGTTGGAGGAGGGCCGGGCTTCGAGAGG CCCAT CCCGGTCTGTGCCAGGGCGGCTGGCGAGC C TGGTGAAGGAGCAAAGGGCCAGGTTCT ACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGG CTGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAA CAAA TTTA TTCG TTTAG TGATGA TG TTTGTTC TTTC TTTTTTTCTGAGAAAGAGAGCGATGTGCCTTTTCAGTGGCCATCCTGTGGTAGATAGTTGTTAATNTGTGTGGAAAGAATTAAATAGCTTACGTTAGCTGTTTGAGCCATCCATACAGAAATGTAAACTGTGACAAGTGTCTCTTTGAAAGACTAATACATTC                                        ]
[+] EMBL OS1321870            [                                             CAGCCACAACCAGAAGAAAGAGGCACCAGTCTGCTCAACCTATACATTTTTAGAGAGAGAAGCTGCAAAGGGTGTGTTAGAGAGAGAT GGAGATGTGCATGGATGACAAGTGGAAGCTCACCAAGAAGGGCAGCCGA A GTTGGAGGAGGGCCGGGCTTCGAGAGG CCCAT CCCGGTCTGTGCCAGNGCGGCTTTCGAGC CTTGGTGAAGGAGCAAAGGGCCAGTTTCT ACATCATGCGTCGNTGNGTCACCATG                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU066283             [                                                    AACCAGAAGAAAGAGGCACCAGTCTGCTCAACCTATACATTTTTAGAGAGAGAAGCTGCAAAGGGTGTGTTAGAGAGAGAT GGAGATGTGCATGGATGACAAGTGGAAGCTCACCAAGAAGGGCAGCCGA A GTTGGAGGAGGGCCGGGCTTCGAGAGG CCCAT CCCGGTCTGTGCCAGGGCGGCTGGCGAGC C TGGTGAAGGAGCAAAGGGCCAGGTTCT ACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGG CTGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAA CAAATTTTA TTCG TTTAG TGATGA TG TTTGTTC TTTC TT                                                                                                                                                                                                         ]
[+] EMBL AU066261             [                                                    AACCAGAAGAAAGAGGCACCAGTCTGCTCAACCTATACATTTTTAGAGAGAGAAGCTGCAAAGGGTGTGTTAGAGAGAGAT GGAGATGTGCATGGATGACAAGTGGAAGCTCACCAAGAAGGGCAGCCGA A GTTGGAGGAGGGCCGGGCTTCGAGAGG CCCAT CCCGGTCTGTGCCAGGGCGGCTGGCGAG  C TGGTGAAGGAGCAAAGGGCCAGGTTCT ACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGG CTNGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAA CAAA TTTA TTCGTTTTAG TTATGA TG TT                                                                                                                                                                                                                      ]
[+] EMBL AU033309             [                                                    AACCAGAAGAAAGAGGCACCAGTCTGCTCAACCTATACATTTTTAGAGAGAGAAGCTGCAAAGGGTGTGTTAGAGAGAGAT GGAGATGTGCATGGATGACAAGTGGAAGCTCACCAAGAAGGGCAGCCGA A GTTGGAGGAGGGCCGGGCTTCGAGAGG CCCAT CCCGGTCTGTGCCAGGGCGGCTGGCGAGC C TGGTGAAGGAGCAAAGGGCCAGGTTCT ACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGNCTAAACGGGTCGGG CTGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAACCAAA TTTATTTCG TTTAG TGATGANTG TTTGTAC TTNC TT                                                                                                                                                                                                         ]
[+] EMBL AU033216             [                                                     ACCAGAAGAAAGAGGCACCAGTCTGCTCAACCTATACATTTTTAGAGAGAGAAGCTGCAAAGGGTGTGTTAGAGAGAGAT GGAGATGTGCATGGATGACAAGTGGAAGCTCACCAAGAAGGGCAGCCGA A GTTGGAGGAGGGCCGGGCTTCGAGAGG CCCAT CCCGGTCTGTGCCAGGGCGGCTGGCGAGC C TGGTGAAGGAGCAAAGGGCCAGGTTCT ACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGG CTNGCTGATGCATCAAGAGGTCGCCTTTCCTAGTAA CAAA TTTA TTCG TTTAGTTGATGA TG TTTGTTCTTTTC TTTTTTTCTGAGAAAGAGAGC ATGTNCCTTTTCAGTGGNCAT                                                                                                                                                                ]
[-] EMBL CF277536             [                                                      CCAGAAGAAAGAGGCACCAGTCTGCTCAACCTATACATTTTTAGAGAGAGAAGCTGCAAAGGGTGTGTTAGAGAGAGAT GGAGATGTGCATGGATGACAAGTGGAAGCTCACCAAGAAGGGCAGCCGA AGGTTGGAGGAGGGCCGGGCTTCGAGAGGCCCCATCCCCGGT TGTGCCAGGGCGGCTGGCGAGC C TGGTGAAGGAGCAAAGGGCCAGGTTCT ACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGG CTGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAA CAAA TTTA TTCG TTTAG TGATGA TG TTTGTTC TTTC TTTTTTTCTGAGAAAGAGAGCGATGTGCCTTTTCAGTGGCCATCCTGTGGTAGATAGTTGTTAATTTGTGTGGAAAGAATTAAATAGCTTACGTTAGCTGTTTGAGCCATCCATACAGAAATGTAAACTGTGACAAGTGTCTCTTTGAAAGACTAATACATTCCATGGTTTCTAAAAAAAA                      ]
[+] EMBL CB682006             [                                                                      CCAGTCTGCTCAACCTATACATTTTTAGAGAGAGAAGCTGCAAAGGGTGTGTTAGAGAGAGAT GGAGATGTGCATGGATGACAAGTGGAAGCTCACCAAGAAGGGCAGCCGA AGGTTGGAGGAGGGCCGGGCTTCGAGAGG CCCAT CCCGGTCTGTGCCAGGGCGGCTGGCGAGC C TGGTGAAGGAGCAAAGGGCCAGGTTCT ACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGG CTGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAA CAAA TTTA TTCG TTTAG TGATGA TG TTTGTTC TTTC TTTTTTTCTGAGAAAGAGAGCGATGTGCCTTTTCAGTGGCCATCCTGTGGTAGATAGTTGTTAATTTGTGTGGAA                                                                                                                                ]
[-] EMBL CF302859             [                                                                                                                                                                                                                                             CGGCTGGCGAGC C TGGTGAAGGAGCAAAGGGCCAGGTTTT ACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGG CTGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAA CAAA TTTA TTCG TTTAG TGATGA TG TTTGTTC TTTC TTTTTTTCTGAGAAAGAGAGCGATGTGCCTTTTCAGTGGCCATCCTGTGGTAGATAGTTGTTAATTTGTGTGGAAAGAATTAAATAGCTTACGTTAGCTGTTTGAGCCATCCATACAGAAATGTAAACTGTGACAAGTGTCTCTTTGAAAGACTAATACATTCCATGGTTTTTAAAAAAAAAAAAAAAAAAAAACCAAAAAAA]
[-] EMBL CF276551             [                                                                                                                                                                                                                                                CTGGCGAGC C TGGTGAAGGAGCAAAGGGCCAGGTTCT ACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGG CTGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAA CAAA TTTA TTCG TTTAG TGATGA TG TTTGTTC TTTC TTTTTTTCTGAGAAAGAGAGCGATGTGCCTTTTCAGTGGCCATCCTGTGGTAGATAGTTGTTAATTTGTGTGGAAAGAATTAAATAGCTTACGTTAGCTGTTTGAGCCATCCATACAGAAATGTAAACTGTGACAAGTGTCTCTTTGAAAGACTAATACATTCCATGGTTTCTAAATCAAAAA                    ]
[-] EMBL CF300370             [                                                                                                                                                                                                                                                CTGGCGAGC C TGGTGAAGGAGCAAAGGGCCAGGTTCT ACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGG CTGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAA CAAA TTTA TTCG TTTAG TGATGA TG TTTGTTC TTTC TTTTTTTCTGAGAAAGAGAGCGATGTGCCTTTTCAGTGGCCATCCTGTGGTAGATAGTTGTTAATTTGTGTGGAAAGAATTAAATAGCTTACGTTAGCTGTTTGAGCCATCCATACAGAAATGTAAACTGTGACAAGTGTCTCTTTGAAAGACTAATACAT                                          ]
[+] EMBL AU097561             [                                                                                                                                                                                                                                                 TGNCGAGCACATGGTGAAGGAGCAAAGGGCCAGGTTCTAACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGG CTGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAA CAAA TTTA TTCG TTTAG TGATGA TG TTTGTTC TTTCTTTTTTTTCTGAGAAAGAGAGCGATGTGCCTTTTCAGTGGCCATCCTGTGGTAGATAGTTGTTAATTTGTGTGGAAAGAATTAAATAGCTTACGTTAGCTGTTTGAGCCATCCATACAGAAATGTAAACTGTGACAAGTGTCTCTTTGAAAGACTAATACATTCCATGGTTTCTAAAAAAAAAAAAAAAAAAAA          ]
[+] EMBL AU033217             [                                                                                                                                                                                                                                                      AGC C TGGTGAAGGAGCAAAGGGCCAGGTTCT ACATCATGCGTCGCTGCGTCACCATGCTCGTCTGCTGGCGGGACTANTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGG CTGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAA CAAA TTTA TTCG TTTAG TNATGA TG TTNNNNC TTTC TTTTTTTCTGAGAAAGAGAGCGATGTGCCTTTTCAGTGGCCATCCTGTGGTAGATAGTTGTTAATTTGTGTGGAAAGAATTAAATAGCTTACGTTAGCTGTTTGAGCCATCCATACAGAAATGTAAACTGTGACAAGTGTCTCTTTGAAAGACTAGTACATTCCATGGTTTCTAAAAAta                       ]
[+] EMBL AU174385             [                                                                                                                                                                                                                                                                                                                                 GACTAGTGATCGATTTTTTANAGCTACGGGCCTAAACGGGTCGGG CTGGCTGATGCATCAANAGGTCGCCTTGCCTAGTAA CAAA TTTA TTCG TTTAG TGATGA TG TTTGTTC TTTCTTTTTTTTCTGANAAANANAGCGATGTGCCTTTTCAGTGGCCATCCTGTGGTANATAGTTGTTAATTTGTGTGGAAAGAATTAAATAGCTTACGTTAGCTGTTTGAGCCATCCATACAGAAATGTAAACTGTGNCAAGTGTNTCTTTGAAAGACTAATACATTCCATGGTTTTTAAAAAAAAAAAAAAAAAAAA          ]


>consensus_15134#0 TGACTGGACTGAAGGAGTAGAAAAAACCTTCTTCCCCAAAATCTCCAGCCACAACCAGAA GAAAGAGGCACCAGTCTGCTCAACCTATACATTTTTAGAGAGAGAAGCTGCAAAGGGTGT GTTAGAGAGAGATGGAGATGTGCATGGATGACAAGTGGAAGCTCACCAAGAAGGGCAGCC GAAGGTTGGAGGAGGGCCGGGCTTCGAGAGGCCCATCCCGGTCTGTGCCAGGGCGGCTGG CGAGCCTGGTGAAGGAGCAAAGGGCCAGGTTCTACATCATGCGTCGCTGCGTCACCATGC TCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGGC TGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAACAAATTTATTCGTTTAGTGATGATG TTTGTTCTTTCTTTTTTTCTGAGAAAGAGAGCGATGTGCCTTTTCAGTGGCCATCCTGTG GTAGATAGTTGTTAATTTGTGTGGAAAGAATTAAATAGCTTACGTTAGCTGTTTGAGCCA TCCATACAGAAATGTAAACTGTGACAAGTGTCTCTTTGAAAGACTAATACATTCCATGGT TTCTAAAAAAAAAAAAAAAAAAAAACCAAAAAAA



consensusID : consensus_15134#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 285
fasta sequence
                              [GGGTCGGGGTGGTTTATGCATCAAAAGGTCCCCTTGCCTAGTAACAAATTTATTCGTTTAGGGAAGAAGTTTGTTCTTTCTTTTTTTTTGAAAAAAAGAGCGATGTGCCTTTTCAGTGGCCATCCTGTGGTAAAAAGTTGTTAATTTGTGTGGAAAAAATTAAAAAGCTTACGTTAGCTGTTTGAGCCCTCCATACAGAAATGTAAACTGTGCCAAGTGTTTTTTTGAAAGAAAAAAACATTCCATGGTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF302194             [GGGTCGGGGTGGTTTATGCATCAAAAGGTCCCCTTGCCTAGTAACAAATTTATTCGTTTAGGGAAGAAGTTTGTTCTTTCTTTTTTTTTGAAAAAAAGAGCGATGTGCCTTTTCAGTGGCCATCCTGTGGTAAAAAGTTGTTAATTTGTGTGGAAAAAATTAAAAAGCTTACGTTAGCTGTTTGAGCCCTCCATACAGAAATGTAAACTGTGCCAAGTGTTTTTTTGAAAGAAAAAAACATTCCATGGTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_15134#1 GGGTCGGGGTGGTTTATGCATCAAAAGGTCCCCTTGCCTAGTAACAAATTTATTCGTTTA GGGAAGAAGTTTGTTCTTTCTTTTTTTTTGAAAAAAAGAGCGATGTGCCTTTTCAGTGGC CATCCTGTGGTAAAAAGTTGTTAATTTGTGTGGAAAAAATTAAAAAGCTTACGTTAGCTG TTTGAGCCCTCCATACAGAAATGTAAACTGTGCCAAGTGTTTTTTTGAAAGAAAAAAACA TTCCATGGTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15134#0      TGACTGGACTGAAGGAGTAGAAAAAACCTTCTTCCCCAAAATCTCCAGCCACAACCAGAA 60
consensus_15134#1      ------------------------------------------------------------
                                                                                   

consensus_15134#0      GAAAGAGGCACCAGTCTGCTCAACCTATACATTTTTAGAGAGAGAAGCTGCAAAGGGTGT 120
consensus_15134#1      ------------------------------------------------------------
                                                                                   

consensus_15134#0      GTTAGAGAGAGATGGAGATGTGCATGGATGACAAGTGGAAGCTCACCAAGAAGGGCAGCC 180
consensus_15134#1      ------------------------------------------------------------
                                                                                   

consensus_15134#0      GAAGGTTGGAGGAGGGCCGGGCTTCGAGAGGCCCATCCCGGTCTGTGCCAGGGCGGCTGG 240
consensus_15134#1      ------------------------------------------------------------
                                                                                   

consensus_15134#0      CGAGCCTGGTGAAGGAGCAAAGGGCCAGGTTCTACATCATGCGTCGCTGCGTCACCATGC 300
consensus_15134#1      ------------------------------------------------------------
                                                                                   

consensus_15134#0      TCGTCTGCTGGCGGGACTAGTGATCGATCTCTTAGAGCTACGGGCCTAAACGGGTCGGGC 360
consensus_15134#1      ---------------------------------------------------GGGTCGGGG 9
                                                                          ******** 

consensus_15134#0      TGGCTGATGCATCAAGAGGTCGCCTTGCCTAGTAACAAATTTATTCGTTTAGTGATGATG 420
consensus_15134#1      TGGTTTATGCATCAAAAGGTCCCCTTGCCTAGTAACAAATTTATTCGTTTAGGGAAGAAG 69
                       *** * ********* ***** ****************************** ** ** *

consensus_15134#0      TTTGTTCTTTCTTTTTTTCTGAGAAAGAGAGCGATGTGCCTTTTCAGTGGCCATCCTGTG 480
consensus_15134#1      TTTGTTCTTTCTTTTTTTTTGAAAAAAAGAGCGATGTGCCTTTTCAGTGGCCATCCTGTG 129
                       ****************** *** *** *********************************

consensus_15134#0      GTAGATAGTTGTTAATTTGTGTGGAAAGAATTAAATAGCTTACGTTAGCTGTTTGAGCCA 540
consensus_15134#1      GTAAAAAGTTGTTAATTTGTGTGGAAAAAATTAAAAAGCTTACGTTAGCTGTTTGAGCCC 189
                       *** * ********************* ******* *********************** 

consensus_15134#0      TCCATACAGAAATGTAAACTGTGACAAGTGTCTCTTTGAAAGACTAATACATTCCATGGT 600
consensus_15134#1      TCCATACAGAAATGTAAACTGTGCCAAGTGTTTTTTTGAAAGAAAAAAACATTCCATGGT 249
                       *********************** ******* * *********  ** ************

consensus_15134#0      TTCTAAAAAAAAAAAAAAAAAAAAACCAAAAAAA-- 634
consensus_15134#1      TTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 285
                       ** **********************  *******  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)