These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15144#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1248 fasta sequence [CGAATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAACTCTTCTCCCATTCCATTCGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA-AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGACTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACA-CCCAGA-TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAACTTTTTATTCCACTGCATCTTAAACTCACATTCATTTCCTTTTGAATGTGACTTATGTTATTTGCAAAAAA] [+] EMBL CF295030 [CGAATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAACTCTTCTCCCATTCCATTCGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCCCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAG ] [+] EMBL CF279071 [ CCATTCCATTCGGCATACATTCCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTTCTTTAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTT TTTTTTGCTCTTTCAACATTTGTTGCAGACGAGAACACATCTGG ATAAATTTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGAGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCT ] [+] EMBL CF333998 [ CCATTCCATTCGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCGACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAANAATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCAC ] [+] EMBL CF280222 [ CCATTCCATTCGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCT ] [+] EMBL AK099479 [ ATTCGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGACTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACA CCCAGA TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAAC ] [+] EMBL CF332157 [ CGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTG ATATAACTGTTCTGAAC ACTTGCAGAAGA AACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTT ] [+] EMBL CF321619 [ CGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGA ] [+] EMBL CF328462 [ TCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCCCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGTAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTT ] [+] EMBL AK061569 [ CCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGACTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACA CCCAGA TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAACTTTTTATTCCACTGCA ] [+] EMBL AK104768 [ CCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGACTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACA CCCAGA TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAACTTTTTATTCCACTGCA ] [-] EMBL CF328461 [ GTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTAGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGACTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACA CCCAGA TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTAaaaaa ] [+] EMBL AA751552 [ acGAGAA TGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGACTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACA CCCAGA TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAACTTTTTATTCCACTGCATCTTAAACTCA ] [-] EMBL CF328880 [ GTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGACTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACA CCCAGATTTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAAaaaa ] [-] EMBL CF332158 [ AGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACA CCCAGA TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGAAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAACTTTTTATTCCACTGCATCTTAAACTCACATTCATTTCCTTTTGAATGTGACTTATGTTATTTGCAAAAAA] [-] EMBL CF279070 [ TGGAGCGCCCACACCCCAGA TTCAGAGTGGGAAGGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAACTTTTTATTCCACTGCATCTTAAACTCACATTCATTTCCTTTTGAATGTGACTTAcaaaaa ] [-] EMBL CF281821 [ AGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTGCACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAACTTTTTATTCCAaaaaaaaaa ] consensusID : consensus_15144#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1053 fasta sequence [TAGAAAATTTTTTCGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCAACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAAAATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGATTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACACCCAGATTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACCCCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCAAAAAACCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAAAAAAAAAAAAAAA] [+] EMBL CF294979 [TAGAAAATTTTTTCGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCAACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAAAATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGACTAATCACCAGCCAAGTCC ] [-] EMBL CF294978 [ TTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAAAATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGATTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACACCCAGATTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACCCCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCAAAAAA ] [-] EMBL CF321620 [ GTCATGAAGGCCAAGTGAAAAAATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAATTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGATTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACACCCAGATTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACCCCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAAAAAAAAAAAAAAA] [-] EMBL CF280223 [ GCCCACACCCAGATTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGaa ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15144#0 CGAATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAACTCTTCTCCCATTCCATTCG 60 consensus_15144#1 ----------------------------------TAGAAAATTTT-----------TTCG 15 ****** * ** **** consensus_15144#0 GCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCG 120 consensus_15144#1 GCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCG 75 ************************************************************ consensus_15144#0 CCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTG 180 consensus_15144#1 CCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTG 135 ************************************************************ consensus_15144#0 GAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATC 240 consensus_15144#1 GAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATC 195 ************************************************************ consensus_15144#0 TGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACC 300 consensus_15144#1 TGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACC 255 ************************************************************ consensus_15144#0 CATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATC 360 consensus_15144#1 CATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATC 315 ************************************************************ consensus_15144#0 GGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACA 420 consensus_15144#1 GGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACA 375 ************************************************************ consensus_15144#0 GCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATC 480 consensus_15144#1 GCTCTTTGCTCTGTCACCAACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATC 435 ****************** ***************************************** consensus_15144#0 TTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAAAATC 540 consensus_15144#1 TTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAAAATC 495 ************************************************************ consensus_15144#0 GTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAA 600 consensus_15144#1 GTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAA 555 ************************************************************ consensus_15144#0 CAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGT 660 consensus_15144#1 CAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGT 615 ************************************************************ consensus_15144#0 TATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGAC 720 consensus_15144#1 TATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGAT 675 *********************************************************** consensus_15144#0 TAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACACCCAGA 780 consensus_15144#1 TAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACACCCAGA 735 ************************************************************ consensus_15144#0 TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACA 840 consensus_15144#1 TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACA 795 ************************************************************ consensus_15144#0 TCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATA 900 consensus_15144#1 TCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATA 855 ************************************************************ consensus_15144#0 TCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTT 960 consensus_15144#1 TCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACCCCATGAAGGGTT 915 *********************************************** ************ consensus_15144#0 GTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCA 1020 consensus_15144#1 GTGTTTGTTCAATGCATGTTTGAACTTCAAAAAACCTACTAGTTGCAAAATTCTACTCCA 975 ***************************** * ************************** consensus_15144#0 GTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTG 1080 consensus_15144#1 GTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTG 1035 ************************************************************ consensus_15144#0 CAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAA 1140 consensus_15144#1 CAAAAAAAAAAA-----AAAAAA------------------------------------- 1053 ***** * * **** consensus_15144#0 GCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAACTTTTTATTCCACTGCATCTTAA 1200 consensus_15144#1 ------------------------------------------------------------ consensus_15144#0 ACTCACATTCATTTCCTTTTGAATGTGACTTATGTTATTTGCAAAAAA 1248 consensus_15144#1 ------------------------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||