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Oryza sativa
cluster # 1515 cluster # 1515       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1515#0 length = 3885 sequences # 1  
 consensus_1515#1 length = 879 sequences # 1  
consensusID : consensus_1515#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3885
fasta sequence 
                              [GGAGGAGGAAGCCAGTTACCACCTCCCGTCTCCCTCTCTTGCGGTGGTGGATTTCTTGCCGACGTTTCCGTCCCCCTCTCTCGCTCTCCCTCTCCGCAGTCCAGAATCCTCTGCTCCGCCCGAATCGCCGCCGCTTCTTCCGAACCGGTGGCGCGGCCGCGGAGCCCTAACCCCTAACGCGTGCTGTGACATCTCCGGCTGTGACAAGGCAGTGGGGGCCTCCGGGGACCTCATTTTCCGCAAGTGGAATCCGCTGCTCCACCCGAATCGCCTCCGCGTCTTCCGAGTCGGTGGCGCGGCCGCGAGCCCTAAACCTACGGCGTGCTGCGACGTCACCGGCGGTCTCGAGGCAGTCGGGGTTCTCCGGGCGGCCATGTCGATGGACTCGGTCATCTCCTCGCGCAGCGGCGCCGACTACAGGAGCTTCCGCCAGATCACCCGGGATCGTTTATTATTTGAAATGTTGAGATCAACGAAGAAGAGCTCAAAATCGGCATGGAAGGTTCTTATCATGGACAAACTTACGGTGAAGATTATGTCATTTTCTTGCAAGATGGCAGATGTGATGGAAGAAGGTGTTTCATTGGTTGAGGACTTATACATGCGGAGGCAACCATTACCATTGATGGATGCAATTTATTTCATTCAACCAACTAAGGAAAACATTCGCATATTCATGTCCGACATGTCAGGGAAAATACCACTGTATAAGAAGTATGTGTCCTGTGCATTTACTTGTTTATGCATGTTGTATCACTTCCAAGTTTAGTTCATGGTTGTTAAGGCAGTAAGGCAACCTAAGGCGACCCTAGACTGCCTTAGCGGCAAGGCATAAGGCGAGGCGACGGCTTAGACACTAGTACACAACTGGATGTAAGTGTGGGAAGGAACAGATGGTGCCTGGGGAGGAAGAGCATGGAAGAGTACAACAGCAGGGGATGTAAGCGTTGGGAAGGAACATAGGGGAAGACAATTAGTACAGGAAGCAATAGATCCGCAAATACAGGAAGGGGAGAGTACACGAGAGAATCAATTGGATCGTGGTAGGATTGTCGCCATAGTTATTAGAACCGGACTGGACTGCCGGTCCGACCGGAATAAACCGGAACCAATGCTCTTACTGGTCTGGTTCGATTAAAAGACCGCTGTGCAATCAAACCGGTAAACAACCGGTTAAACCGGTTTGTCTGATTCCTGGTAACACTGGAGACACCTTAACAACCATGGTTTAGTTTTGACACGATACTCTACCTGTTTCAGAGCCTATGTGTTTTTCAGTTCACCCGTACAAAGAGAGTTGGTGGCCCAAATAAAAAAAGATTCAAATGTTAGAGCACGCATAGGTGCACTCAGTGAGATGAATCTGGAATATTTTGCTATCGATAGCCAGGGCTTTACAACTGACCATGACAAGGCCCTAGAAGAGCTATTTAGTGAAAATGCAGAAGGTTCACTCAAGTATAACTCTTGCCTTAACATGATGGCCACTCGTATTGCTACAGTATTCGCATCAATGAGGGAATTTCCTCGTGTGCACTATCGTGTTGCCAGGACGATTGATGCTTCTACTTTGACAACACTACGAGATTTGGCACCCACAAAGCTTGCTGCTGGTGTGTGGAATTGCCTTGCAAGATTTAAGGCTATGATACCTGAATTCCCTCAGACTGAAACATGTGAATTACTTATCGTAGACCGATCAATAGATCAGATCGCACCAATTATTCACGAATGGACCTATGATGCCATGTGTCATGATCTACTCTGCATGGATGGCAACAAGTATGTACAACAGGTCCCAAGCAAGTCTGGTTCAGGCACTGAGAACAAGGAGGTTTTGTTGGAGGATCATGATCCAATATGGCTTGAGCTTCGGCATGTACATATAGCCAGTGCTAGTGAAAGATTGCATGAGAAGATGACCAATTTTGTATCAAAAAACAAAGCTGCTCAACTACATCAAGCAAGAAATGGTGGAGATTTATCAACCAAAGAGTTGCAAAAAATGGTTCAAGCTCTTCCGCAGTACAGTGATCAAATTGACAAGCTTGCGCTTCATGTTGAGATTGCTGGAAAGCTCAATAGCACAATTAAAGAGCAACAATTGAAAGATGTTGGGCAGCTTGAGCAAGATCTTGTGTTTGGTGATGCTGGGACAAAAGAACTCATAAATTTCTTCAGGACACATTTGGATATCAGTCGTGAAAATAAGCTGCGTTTGCTTATGGTTTATGTTGCCATCAATCCAGATAAAACTCGAAGTGATAAGGGTGCAAAGTTGATGCGGCTCGCAGGATTATCTGCTGATGACATGATTGCAGTGAGTAATATGCGTTGCCTTTGTGGGCATGATTCTAAAAAGTCTTCGGCAGGTGGCTTTACTCTGAAATTTGATCTACGTAAGAAAAGGCATGGTATCAGAAAGGAGCGGATAGGAGAAGAATCAAAATGGATGTTGTCCCGGTTTTATCCCATCCTGGAGGAGTTGATTGAGAAACTTAGCAAGGGTGAGCTACCAAAAGATGAGTATCACTATTTGAATGACCCTAGTCCTAGTTTCCGGGGAATTCCAAGTGCATCTACCCAAACAAGCCCAGCTCACCAGCCAGCTCAATCCATGAGATCTAGAAGGACAGGTGGCACATGGGCCAGGCCTCGAGACTCTGATGATGGGTATTCAAGTGACTCGGTACTGAAGCACACATCAAGTAATAGCAGAAAGTTGGGTCAGCGATTATTTGTTTTTGTTATTGGTGGTGCTACTCGATCTGAGTTATGTGCTGCTCACAAGCTATCATCAAAACTGAAGAGAGAAATTATCCTTGGCTCCTCTAGTCTTGATGATCCACCCCAGTTCATCACTGTAAGTTTCTTGTTCATGTCTCCTCTCCAATATGCTTGTTGTACCAAGAACTTGTTAACATGTTATTATTTGCAGAAATTAAAAATGTTATCAACCGATGATTTGACACTTGACGATCTACAGATATAACAATATACAAAGGCCTCTTTCTTGACTTTCTCTTTTATAATCATTTGCTGATCTTTTTTCTATTATAGAACTCTATGAGTGCGCATATAACGTTGTGTCGAAAAGTTTACACAGGTTCCCATTAAACTACAGGCTTACAGCCTAGTGTGCCTATAATATAGCAGTGTGCCAGAAACTGTATTATGAGATTGGTGGACAATATGTTCGTTATCGTGTACTTCACTAATTTCTTTCTTCTTTTGGACGCGAATAATTATTCTGAATTGGTTTTACTAGTAAAAGTTGTGATGAAGTGGTGAGCAAAGGTTGCTACTTCCTTTGTTTCACATGGATCTATGTATTTGTTCCATACATATGTCCAAATTTATATTGATGTTAGTGAATCTGGATGAGTAATGAAGGGGCTAGGAGTCTATGGAAAAGACGAGCGAGGAAGAGCTCGTAGTCCCCGACTCCATGGACGCGGCCGGTGAGGAAGTGCTCGTGGTCACCAACTCCATGGATGATGAGGTCCGCGAGGAGGTGCACGTGACCGTTGACTATATAGACGATGAGGCCAGCGAGGAAGGGCATGTGGTTGTCGTGGCCGGCGAGGTGGCCGGCGAGGAAGTGCACGTGGTTGCCGACTCTATGGACGTCGCGGCCGGCAAGGAAGTGCACGGGGTTGCTGACCCCATGGACGACGAGGCCGGAGAGGAAGTGCTCGTGGTCGCCGGCTCCATGGACGAAGATGAGGAGTGTCCTGGCACCGGCGACACCAACATCGAGAGGAGTGTGTCGCCGCTGGTGCTGGTGACAACAACGATGAGGAGATTGAAGAACAGGACTTGCATAAGCAAAAGGTGCATTGTTGAAGCTTCTTCTACCTACTTATTTTCCAAAAGAAAAGAAAT]

[+] EMBL AK119369             [GGAGGAGGAAGCCAGTTACCACCTCCCGTCTCCCTCTCTTGCGGTGGTGGATTTCTTGCCGACGTTTCCGTCCCCCTCTCTCGCTCTCCCTCTCCGCAGTCCAGAATCCTCTGCTCCGCCCGAATCGCCGCCGCTTCTTCCGAACCGGTGGCGCGGCCGCGGAGCCCTAACCCCTAACGCGTGCTGTGACATCTCCGGCTGTGACAAGGCAGTGGGGGCCTCCGGGGACCTCATTTTCCGCAAGTGGAATCCGCTGCTCCACCCGAATCGCCTCCGCGTCTTCCGAGTCGGTGGCGCGGCCGCGAGCCCTAAACCTACGGCGTGCTGCGACGTCACCGGCGGTCTCGAGGCAGTCGGGGTTCTCCGGGCGGCCATGTCGATGGACTCGGTCATCTCCTCGCGCAGCGGCGCCGACTACAGGAGCTTCCGCCAGATCACCCGGGATCGTTTATTATTTGAAATGTTGAGATCAACGAAGAAGAGCTCAAAATCGGCATGGAAGGTTCTTATCATGGACAAACTTACGGTGAAGATTATGTCATTTTCTTGCAAGATGGCAGATGTGATGGAAGAAGGTGTTTCATTGGTTGAGGACTTATACATGCGGAGGCAACCATTACCATTGATGGATGCAATTTATTTCATTCAACCAACTAAGGAAAACATTCGCATATTCATGTCCGACATGTCAGGGAAAATACCACTGTATAAGAAGTATGTGTCCTGTGCATTTACTTGTTTATGCATGTTGTATCACTTCCAAGTTTAGTTCATGGTTGTTAAGGCAGTAAGGCAACCTAAGGCGACCCTAGACTGCCTTAGCGGCAAGGCATAAGGCGAGGCGACGGCTTAGACACTAGTACACAACTGGATGTAAGTGTGGGAAGGAACAGATGGTGCCTGGGGAGGAAGAGCATGGAAGAGTACAACAGCAGGGGATGTAAGCGTTGGGAAGGAACATAGGGGAAGACAATTAGTACAGGAAGCAATAGATCCGCAAATACAGGAAGGGGAGAGTACACGAGAGAATCAATTGGATCGTGGTAGGATTGTCGCCATAGTTATTAGAACCGGACTGGACTGCCGGTCCGACCGGAATAAACCGGAACCAATGCTCTTACTGGTCTGGTTCGATTAAAAGACCGCTGTGCAATCAAACCGGTAAACAACCGGTTAAACCGGTTTGTCTGATTCCTGGTAACACTGGAGACACCTTAACAACCATGGTTTAGTTTTGACACGATACTCTACCTGTTTCAGAGCCTATGTGTTTTTCAGTTCACCCGTACAAAGAGAGTTGGTGGCCCAAATAAAAAAAGATTCAAATGTTAGAGCACGCATAGGTGCACTCAGTGAGATGAATCTGGAATATTTTGCTATCGATAGCCAGGGCTTTACAACTGACCATGACAAGGCCCTAGAAGAGCTATTTAGTGAAAATGCAGAAGGTTCACTCAAGTATAACTCTTGCCTTAACATGATGGCCACTCGTATTGCTACAGTATTCGCATCAATGAGGGAATTTCCTCGTGTGCACTATCGTGTTGCCAGGACGATTGATGCTTCTACTTTGACAACACTACGAGATTTGGCACCCACAAAGCTTGCTGCTGGTGTGTGGAATTGCCTTGCAAGATTTAAGGCTATGATACCTGAATTCCCTCAGACTGAAACATGTGAATTACTTATCGTAGACCGATCAATAGATCAGATCGCACCAATTATTCACGAATGGACCTATGATGCCATGTGTCATGATCTACTCTGCATGGATGGCAACAAGTATGTACAACAGGTCCCAAGCAAGTCTGGTTCAGGCACTGAGAACAAGGAGGTTTTGTTGGAGGATCATGATCCAATATGGCTTGAGCTTCGGCATGTACATATAGCCAGTGCTAGTGAAAGATTGCATGAGAAGATGACCAATTTTGTATCAAAAAACAAAGCTGCTCAACTACATCAAGCAAGAAATGGTGGAGATTTATCAACCAAAGAGTTGCAAAAAATGGTTCAAGCTCTTCCGCAGTACAGTGATCAAATTGACAAGCTTGCGCTTCATGTTGAGATTGCTGGAAAGCTCAATAGCACAATTAAAGAGCAACAATTGAAAGATGTTGGGCAGCTTGAGCAAGATCTTGTGTTTGGTGATGCTGGGACAAAAGAACTCATAAATTTCTTCAGGACACATTTGGATATCAGTCGTGAAAATAAGCTGCGTTTGCTTATGGTTTATGTTGCCATCAATCCAGATAAAACTCGAAGTGATAAGGGTGCAAAGTTGATGCGGCTCGCAGGATTATCTGCTGATGACATGATTGCAGTGAGTAATATGCGTTGCCTTTGTGGGCATGATTCTAAAAAGTCTTCGGCAGGTGGCTTTACTCTGAAATTTGATCTACGTAAGAAAAGGCATGGTATCAGAAAGGAGCGGATAGGAGAAGAATCAAAATGGATGTTGTCCCGGTTTTATCCCATCCTGGAGGAGTTGATTGAGAAACTTAGCAAGGGTGAGCTACCAAAAGATGAGTATCACTATTTGAATGACCCTAGTCCTAGTTTCCGGGGAATTCCAAGTGCATCTACCCAAACAAGCCCAGCTCACCAGCCAGCTCAATCCATGAGATCTAGAAGGACAGGTGGCACATGGGCCAGGCCTCGAGACTCTGATGATGGGTATTCAAGTGACTCGGTACTGAAGCACACATCAAGTAATAGCAGAAAGTTGGGTCAGCGATTATTTGTTTTTGTTATTGGTGGTGCTACTCGATCTGAGTTATGTGCTGCTCACAAGCTATCATCAAAACTGAAGAGAGAAATTATCCTTGGCTCCTCTAGTCTTGATGATCCACCCCAGTTCATCACTGTAAGTTTCTTGTTCATGTCTCCTCTCCAATATGCTTGTTGTACCAAGAACTTGTTAACATGTTATTATTTGCAGAAATTAAAAATGTTATCAACCGATGATTTGACACTTGACGATCTACAGATATAACAATATACAAAGGCCTCTTTCTTGACTTTCTCTTTTATAATCATTTGCTGATCTTTTTTCTATTATAGAACTCTATGAGTGCGCATATAACGTTGTGTCGAAAAGTTTACACAGGTTCCCATTAAACTACAGGCTTACAGCCTAGTGTGCCTATAATATAGCAGTGTGCCAGAAACTGTATTATGAGATTGGTGGACAATATGTTCGTTATCGTGTACTTCACTAATTTCTTTCTTCTTTTGGACGCGAATAATTATTCTGAATTGGTTTTACTAGTAAAAGTTGTGATGAAGTGGTGAGCAAAGGTTGCTACTTCCTTTGTTTCACATGGATCTATGTATTTGTTCCATACATATGTCCAAATTTATATTGATGTTAGTGAATCTGGATGAGTAATGAAGGGGCTAGGAGTCTATGGAAAAGACGAGCGAGGAAGAGCTCGTAGTCCCCGACTCCATGGACGCGGCCGGTGAGGAAGTGCTCGTGGTCACCAACTCCATGGATGATGAGGTCCGCGAGGAGGTGCACGTGACCGTTGACTATATAGACGATGAGGCCAGCGAGGAAGGGCATGTGGTTGTCGTGGCCGGCGAGGTGGCCGGCGAGGAAGTGCACGTGGTTGCCGACTCTATGGACGTCGCGGCCGGCAAGGAAGTGCACGGGGTTGCTGACCCCATGGACGACGAGGCCGGAGAGGAAGTGCTCGTGGTCGCCGGCTCCATGGACGAAGATGAGGAGTGTCCTGGCACCGGCGACACCAACATCGAGAGGAGTGTGTCGCCGCTGGTGCTGGTGACAACAACGATGAGGAGATTGAAGAACAGGACTTGCATAAGCAAAAGGTGCATTGTTGAAGCTTCTTCTACCTACTTATTTTCCAAAAGAAAAGAAAT]




>consensus_1515#0
GGAGGAGGAAGCCAGTTACCACCTCCCGTCTCCCTCTCTTGCGGTGGTGGATTTCTTGCC
GACGTTTCCGTCCCCCTCTCTCGCTCTCCCTCTCCGCAGTCCAGAATCCTCTGCTCCGCC
CGAATCGCCGCCGCTTCTTCCGAACCGGTGGCGCGGCCGCGGAGCCCTAACCCCTAACGC
GTGCTGTGACATCTCCGGCTGTGACAAGGCAGTGGGGGCCTCCGGGGACCTCATTTTCCG
CAAGTGGAATCCGCTGCTCCACCCGAATCGCCTCCGCGTCTTCCGAGTCGGTGGCGCGGC
CGCGAGCCCTAAACCTACGGCGTGCTGCGACGTCACCGGCGGTCTCGAGGCAGTCGGGGT
TCTCCGGGCGGCCATGTCGATGGACTCGGTCATCTCCTCGCGCAGCGGCGCCGACTACAG
GAGCTTCCGCCAGATCACCCGGGATCGTTTATTATTTGAAATGTTGAGATCAACGAAGAA
GAGCTCAAAATCGGCATGGAAGGTTCTTATCATGGACAAACTTACGGTGAAGATTATGTC
ATTTTCTTGCAAGATGGCAGATGTGATGGAAGAAGGTGTTTCATTGGTTGAGGACTTATA
CATGCGGAGGCAACCATTACCATTGATGGATGCAATTTATTTCATTCAACCAACTAAGGA
AAACATTCGCATATTCATGTCCGACATGTCAGGGAAAATACCACTGTATAAGAAGTATGT
GTCCTGTGCATTTACTTGTTTATGCATGTTGTATCACTTCCAAGTTTAGTTCATGGTTGT
TAAGGCAGTAAGGCAACCTAAGGCGACCCTAGACTGCCTTAGCGGCAAGGCATAAGGCGA
GGCGACGGCTTAGACACTAGTACACAACTGGATGTAAGTGTGGGAAGGAACAGATGGTGC
CTGGGGAGGAAGAGCATGGAAGAGTACAACAGCAGGGGATGTAAGCGTTGGGAAGGAACA
TAGGGGAAGACAATTAGTACAGGAAGCAATAGATCCGCAAATACAGGAAGGGGAGAGTAC
ACGAGAGAATCAATTGGATCGTGGTAGGATTGTCGCCATAGTTATTAGAACCGGACTGGA
CTGCCGGTCCGACCGGAATAAACCGGAACCAATGCTCTTACTGGTCTGGTTCGATTAAAA
GACCGCTGTGCAATCAAACCGGTAAACAACCGGTTAAACCGGTTTGTCTGATTCCTGGTA
ACACTGGAGACACCTTAACAACCATGGTTTAGTTTTGACACGATACTCTACCTGTTTCAG
AGCCTATGTGTTTTTCAGTTCACCCGTACAAAGAGAGTTGGTGGCCCAAATAAAAAAAGA
TTCAAATGTTAGAGCACGCATAGGTGCACTCAGTGAGATGAATCTGGAATATTTTGCTAT
CGATAGCCAGGGCTTTACAACTGACCATGACAAGGCCCTAGAAGAGCTATTTAGTGAAAA
TGCAGAAGGTTCACTCAAGTATAACTCTTGCCTTAACATGATGGCCACTCGTATTGCTAC
AGTATTCGCATCAATGAGGGAATTTCCTCGTGTGCACTATCGTGTTGCCAGGACGATTGA
TGCTTCTACTTTGACAACACTACGAGATTTGGCACCCACAAAGCTTGCTGCTGGTGTGTG
GAATTGCCTTGCAAGATTTAAGGCTATGATACCTGAATTCCCTCAGACTGAAACATGTGA
ATTACTTATCGTAGACCGATCAATAGATCAGATCGCACCAATTATTCACGAATGGACCTA
TGATGCCATGTGTCATGATCTACTCTGCATGGATGGCAACAAGTATGTACAACAGGTCCC
AAGCAAGTCTGGTTCAGGCACTGAGAACAAGGAGGTTTTGTTGGAGGATCATGATCCAAT
ATGGCTTGAGCTTCGGCATGTACATATAGCCAGTGCTAGTGAAAGATTGCATGAGAAGAT
GACCAATTTTGTATCAAAAAACAAAGCTGCTCAACTACATCAAGCAAGAAATGGTGGAGA
TTTATCAACCAAAGAGTTGCAAAAAATGGTTCAAGCTCTTCCGCAGTACAGTGATCAAAT
TGACAAGCTTGCGCTTCATGTTGAGATTGCTGGAAAGCTCAATAGCACAATTAAAGAGCA
ACAATTGAAAGATGTTGGGCAGCTTGAGCAAGATCTTGTGTTTGGTGATGCTGGGACAAA
AGAACTCATAAATTTCTTCAGGACACATTTGGATATCAGTCGTGAAAATAAGCTGCGTTT
GCTTATGGTTTATGTTGCCATCAATCCAGATAAAACTCGAAGTGATAAGGGTGCAAAGTT
GATGCGGCTCGCAGGATTATCTGCTGATGACATGATTGCAGTGAGTAATATGCGTTGCCT
TTGTGGGCATGATTCTAAAAAGTCTTCGGCAGGTGGCTTTACTCTGAAATTTGATCTACG
TAAGAAAAGGCATGGTATCAGAAAGGAGCGGATAGGAGAAGAATCAAAATGGATGTTGTC
CCGGTTTTATCCCATCCTGGAGGAGTTGATTGAGAAACTTAGCAAGGGTGAGCTACCAAA
AGATGAGTATCACTATTTGAATGACCCTAGTCCTAGTTTCCGGGGAATTCCAAGTGCATC
TACCCAAACAAGCCCAGCTCACCAGCCAGCTCAATCCATGAGATCTAGAAGGACAGGTGG
CACATGGGCCAGGCCTCGAGACTCTGATGATGGGTATTCAAGTGACTCGGTACTGAAGCA
CACATCAAGTAATAGCAGAAAGTTGGGTCAGCGATTATTTGTTTTTGTTATTGGTGGTGC
TACTCGATCTGAGTTATGTGCTGCTCACAAGCTATCATCAAAACTGAAGAGAGAAATTAT
CCTTGGCTCCTCTAGTCTTGATGATCCACCCCAGTTCATCACTGTAAGTTTCTTGTTCAT
GTCTCCTCTCCAATATGCTTGTTGTACCAAGAACTTGTTAACATGTTATTATTTGCAGAA
ATTAAAAATGTTATCAACCGATGATTTGACACTTGACGATCTACAGATATAACAATATAC
AAAGGCCTCTTTCTTGACTTTCTCTTTTATAATCATTTGCTGATCTTTTTTCTATTATAG
AACTCTATGAGTGCGCATATAACGTTGTGTCGAAAAGTTTACACAGGTTCCCATTAAACT
ACAGGCTTACAGCCTAGTGTGCCTATAATATAGCAGTGTGCCAGAAACTGTATTATGAGA
TTGGTGGACAATATGTTCGTTATCGTGTACTTCACTAATTTCTTTCTTCTTTTGGACGCG
AATAATTATTCTGAATTGGTTTTACTAGTAAAAGTTGTGATGAAGTGGTGAGCAAAGGTT
GCTACTTCCTTTGTTTCACATGGATCTATGTATTTGTTCCATACATATGTCCAAATTTAT
ATTGATGTTAGTGAATCTGGATGAGTAATGAAGGGGCTAGGAGTCTATGGAAAAGACGAG
CGAGGAAGAGCTCGTAGTCCCCGACTCCATGGACGCGGCCGGTGAGGAAGTGCTCGTGGT
CACCAACTCCATGGATGATGAGGTCCGCGAGGAGGTGCACGTGACCGTTGACTATATAGA
CGATGAGGCCAGCGAGGAAGGGCATGTGGTTGTCGTGGCCGGCGAGGTGGCCGGCGAGGA
AGTGCACGTGGTTGCCGACTCTATGGACGTCGCGGCCGGCAAGGAAGTGCACGGGGTTGC
TGACCCCATGGACGACGAGGCCGGAGAGGAAGTGCTCGTGGTCGCCGGCTCCATGGACGA
AGATGAGGAGTGTCCTGGCACCGGCGACACCAACATCGAGAGGAGTGTGTCGCCGCTGGT
GCTGGTGACAACAACGATGAGGAGATTGAAGAACAGGACTTGCATAAGCAAAAGGTGCAT
TGTTGAAGCTTCTTCTACCTACTTATTTTCCAAAAGAAAAGAAAT

consensusID : consensus_1515#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 879
fasta sequence 
                              [GAGACAAGGGGGCAGGATTATCTGCTGATGACATGATTGCAGTGAGTAATATGCGTTGCCTTTGTGGGCATGATTCTAAAAAGTCTTCGGCAGGTGGCTTTACTCTGAAATTTGATCTACGTAAGAAAAGGCATGGTATCANGAAAGGAGCGGATAGGAGAAGAATCAAAATGGATGTTGTCCCGGTTTTATCCCATCCTGGAGGAGTTGATTGAGAAACTTAGCAAGGGCGAGCTACCAAAAGATGAGTATCACTGTTTGAATGACCCTANNCCTAGTTTCCGGGGAATTCCAAGTGCATCTACCCAAACAAGCCCAGCTCACCAGCCAGCTCAATCCATGAGATCTAGAAGGACAGGTGGCACATGGGCCAGGCCTCGAGACTCTGATGATGGGTATTCAAGTGACTCGGTACTGAAGCACACATCAAGTAATAGCAGAAAGTTGGGTCAGCGATTATTTGTTTTTGTTATTGGTGGTGCTACTCGATCTGAGTTATGTGCTGCTCACAAGCTATCATCAAAACTGAAGAGAGAAATTATCCTTGGCTCCTCTAGTCTTGATGATCCACCCCAGTTCATCACTAAATTAAAAATGTTATCGACCGATGATTTGACACTTGACGATCTACAGATATAACAATATACAAAGGCCTCTTTCTTGACTTTCTCTTTTATAATCATTTGCTGATCTTTTTTCTATTATAGAACTCTATGAGTGCGCATATAACATTGNGTCAAAAAGNTTACACAGGGTNCCATTAAACTACAGGCTTACAGNCTAGNGNGCCTATAATATAGCAGNGNGCCAGAAACTGNAATATGAAATTGGNGGGCAATATGGTCGNTATCGGGGACTTACTAATTTCTTTCTTCTTTT]

[+] EMBL CB096998             [GAGACAAGGGGGCAGGATTATCTGCTGATGACATGATTGCAGTGAGTAATATGCGTTGCCTTTGTGGGCATGATTCTAAAAAGTCTTCGGCAGGTGGCTTTACTCTGAAATTTGATCTACGTAAGAAAAGGCATGGTATCANGAAAGGAGCGGATAGGAGAAGAATCAAAATGGATGTTGTCCCGGTTTTATCCCATCCTGGAGGAGTTGATTGAGAAACTTAGCAAGGGCGAGCTACCAAAAGATGAGTATCACTGTTTGAATGACCCTANNCCTAGTTTCCGGGGAATTCCAAGTGCATCTACCCAAACAAGCCCAGCTCACCAGCCAGCTCAATCCATGAGATCTAGAAGGACAGGTGGCACATGGGCCAGGCCTCGAGACTCTGATGATGGGTATTCAAGTGACTCGGTACTGAAGCACACATCAAGTAATAGCAGAAAGTTGGGTCAGCGATTATTTGTTTTTGTTATTGGTGGTGCTACTCGATCTGAGTTATGTGCTGCTCACAAGCTATCATCAAAACTGAAGAGAGAAATTATCCTTGGCTCCTCTAGTCTTGATGATCCACCCCAGTTCATCACTAAATTAAAAATGTTATCGACCGATGATTTGACACTTGACGATCTACAGATATAACAATATACAAAGGCCTCTTTCTTGACTTTCTCTTTTATAATCATTTGCTGATCTTTTTTCTATTATAGAACTCTATGAGTGCGCATATAACATTGNGTCAAAAAGNTTACACAGGGTNCCATTAAACTACAGGCTTACAGNCTAGNGNGCCTATAATATAGCAGNGNGCCAGAAACTGNAATATGAAATTGGNGGGCAATATGGTCGNTATCGGGGACTTACTAATTTCTTTCTTCTTTT]




>consensus_1515#1
GAGACAAGGGGGCAGGATTATCTGCTGATGACATGATTGCAGTGAGTAATATGCGTTGCC
TTTGTGGGCATGATTCTAAAAAGTCTTCGGCAGGTGGCTTTACTCTGAAATTTGATCTAC
GTAAGAAAAGGCATGGTATCANGAAAGGAGCGGATAGGAGAAGAATCAAAATGGATGTTG
TCCCGGTTTTATCCCATCCTGGAGGAGTTGATTGAGAAACTTAGCAAGGGCGAGCTACCA
AAAGATGAGTATCACTGTTTGAATGACCCTANNCCTAGTTTCCGGGGAATTCCAAGTGCA
TCTACCCAAACAAGCCCAGCTCACCAGCCAGCTCAATCCATGAGATCTAGAAGGACAGGT
GGCACATGGGCCAGGCCTCGAGACTCTGATGATGGGTATTCAAGTGACTCGGTACTGAAG
CACACATCAAGTAATAGCAGAAAGTTGGGTCAGCGATTATTTGTTTTTGTTATTGGTGGT
GCTACTCGATCTGAGTTATGTGCTGCTCACAAGCTATCATCAAAACTGAAGAGAGAAATT
ATCCTTGGCTCCTCTAGTCTTGATGATCCACCCCAGTTCATCACTAAATTAAAAATGTTA
TCGACCGATGATTTGACACTTGACGATCTACAGATATAACAATATACAAAGGCCTCTTTC
TTGACTTTCTCTTTTATAATCATTTGCTGATCTTTTTTCTATTATAGAACTCTATGAGTG
CGCATATAACATTGNGTCAAAAAGNTTACACAGGGTNCCATTAAACTACAGGCTTACAGN
CTAGNGNGCCTATAATATAGCAGNGNGCCAGAAACTGNAATATGAAATTGGNGGGCAATA
TGGTCGNTATCGGGGACTTACTAATTTCTTTCTTCTTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1515#0      GGAGGAGGAAGCCAGTTACCACCTCCCGTCTCCCTCTCTTGCGGTGGTGGATTTCTTGCC 60
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      GACGTTTCCGTCCCCCTCTCTCGCTCTCCCTCTCCGCAGTCCAGAATCCTCTGCTCCGCC 120
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      CGAATCGCCGCCGCTTCTTCCGAACCGGTGGCGCGGCCGCGGAGCCCTAACCCCTAACGC 180
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      GTGCTGTGACATCTCCGGCTGTGACAAGGCAGTGGGGGCCTCCGGGGACCTCATTTTCCG 240
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      CAAGTGGAATCCGCTGCTCCACCCGAATCGCCTCCGCGTCTTCCGAGTCGGTGGCGCGGC 300
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      CGCGAGCCCTAAACCTACGGCGTGCTGCGACGTCACCGGCGGTCTCGAGGCAGTCGGGGT 360
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      TCTCCGGGCGGCCATGTCGATGGACTCGGTCATCTCCTCGCGCAGCGGCGCCGACTACAG 420
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      GAGCTTCCGCCAGATCACCCGGGATCGTTTATTATTTGAAATGTTGAGATCAACGAAGAA 480
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      GAGCTCAAAATCGGCATGGAAGGTTCTTATCATGGACAAACTTACGGTGAAGATTATGTC 540
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      ATTTTCTTGCAAGATGGCAGATGTGATGGAAGAAGGTGTTTCATTGGTTGAGGACTTATA 600
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      CATGCGGAGGCAACCATTACCATTGATGGATGCAATTTATTTCATTCAACCAACTAAGGA 660
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      AAACATTCGCATATTCATGTCCGACATGTCAGGGAAAATACCACTGTATAAGAAGTATGT 720
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      GTCCTGTGCATTTACTTGTTTATGCATGTTGTATCACTTCCAAGTTTAGTTCATGGTTGT 780
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      TAAGGCAGTAAGGCAACCTAAGGCGACCCTAGACTGCCTTAGCGGCAAGGCATAAGGCGA 840
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      GGCGACGGCTTAGACACTAGTACACAACTGGATGTAAGTGTGGGAAGGAACAGATGGTGC 900
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      CTGGGGAGGAAGAGCATGGAAGAGTACAACAGCAGGGGATGTAAGCGTTGGGAAGGAACA 960
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      TAGGGGAAGACAATTAGTACAGGAAGCAATAGATCCGCAAATACAGGAAGGGGAGAGTAC 1020
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      ACGAGAGAATCAATTGGATCGTGGTAGGATTGTCGCCATAGTTATTAGAACCGGACTGGA 1080
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      CTGCCGGTCCGACCGGAATAAACCGGAACCAATGCTCTTACTGGTCTGGTTCGATTAAAA 1140
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      GACCGCTGTGCAATCAAACCGGTAAACAACCGGTTAAACCGGTTTGTCTGATTCCTGGTA 1200
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      ACACTGGAGACACCTTAACAACCATGGTTTAGTTTTGACACGATACTCTACCTGTTTCAG 1260
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      AGCCTATGTGTTTTTCAGTTCACCCGTACAAAGAGAGTTGGTGGCCCAAATAAAAAAAGA 1320
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      TTCAAATGTTAGAGCACGCATAGGTGCACTCAGTGAGATGAATCTGGAATATTTTGCTAT 1380
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      CGATAGCCAGGGCTTTACAACTGACCATGACAAGGCCCTAGAAGAGCTATTTAGTGAAAA 1440
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      TGCAGAAGGTTCACTCAAGTATAACTCTTGCCTTAACATGATGGCCACTCGTATTGCTAC 1500
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      AGTATTCGCATCAATGAGGGAATTTCCTCGTGTGCACTATCGTGTTGCCAGGACGATTGA 1560
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      TGCTTCTACTTTGACAACACTACGAGATTTGGCACCCACAAAGCTTGCTGCTGGTGTGTG 1620
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      GAATTGCCTTGCAAGATTTAAGGCTATGATACCTGAATTCCCTCAGACTGAAACATGTGA 1680
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      ATTACTTATCGTAGACCGATCAATAGATCAGATCGCACCAATTATTCACGAATGGACCTA 1740
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      TGATGCCATGTGTCATGATCTACTCTGCATGGATGGCAACAAGTATGTACAACAGGTCCC 1800
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      AAGCAAGTCTGGTTCAGGCACTGAGAACAAGGAGGTTTTGTTGGAGGATCATGATCCAAT 1860
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      ATGGCTTGAGCTTCGGCATGTACATATAGCCAGTGCTAGTGAAAGATTGCATGAGAAGAT 1920
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      GACCAATTTTGTATCAAAAAACAAAGCTGCTCAACTACATCAAGCAAGAAATGGTGGAGA 1980
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      TTTATCAACCAAAGAGTTGCAAAAAATGGTTCAAGCTCTTCCGCAGTACAGTGATCAAAT 2040
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      TGACAAGCTTGCGCTTCATGTTGAGATTGCTGGAAAGCTCAATAGCACAATTAAAGAGCA 2100
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      ACAATTGAAAGATGTTGGGCAGCTTGAGCAAGATCTTGTGTTTGGTGATGCTGGGACAAA 2160
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      AGAACTCATAAATTTCTTCAGGACACATTTGGATATCAGTCGTGAAAATAAGCTGCGTTT 2220
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      GCTTATGGTTTATGTTGCCATCAATCCAGATAAAACTCGAAGTGATAAGGGTGCAAAGTT 2280
consensus_1515#1      -------------------------------------------------------GAGAC 5
                                                                              **  

consensus_1515#0      GATGCGGCTCGCAGGATTATCTGCTGATGACATGATTGCAGTGAGTAATATGCGTTGCCT 2340
consensus_1515#1      AAGGGGGC----AGGATTATCTGCTGATGACATGATTGCAGTGAGTAATATGCGTTGCCT 61
                       * * ***    ************************************************

consensus_1515#0      TTGTGGGCATGATTCTAAAAAGTCTTCGGCAGGTGGCTTTACTCTGAAATTTGATCTACG 2400
consensus_1515#1      TTGTGGGCATGATTCTAAAAAGTCTTCGGCAGGTGGCTTTACTCTGAAATTTGATCTACG 121
                      ************************************************************

consensus_1515#0      TAAGAAAAGGCATGGTATCAG-AAAGGAGCGGATAGGAGAAGAATCAAAATGGATGTTGT 2459
consensus_1515#1      TAAGAAAAGGCATGGTATCANGAAAGGAGCGGATAGGAGAAGAATCAAAATGGATGTTGT 181
                      ********************  **************************************

consensus_1515#0      CCCGGTTTTATCCCATCCTGGAGGAGTTGATTGAGAAACTTAGCAAGGGTGAGCTACCAA 2519
consensus_1515#1      CCCGGTTTTATCCCATCCTGGAGGAGTTGATTGAGAAACTTAGCAAGGGCGAGCTACCAA 241
                      ************************************************* **********

consensus_1515#0      AAGATGAGTATCACTATTTGAATGACCCTAGTCCTAGTTTCCGGGGAATTCCAAGTGCAT 2579
consensus_1515#1      AAGATGAGTATCACTGTTTGAATGACCCTANNCCTAGTTTCCGGGGAATTCCAAGTGCAT 301
                      *************** **************  ****************************

consensus_1515#0      CTACCCAAACAAGCCCAGCTCACCAGCCAGCTCAATCCATGAGATCTAGAAGGACAGGTG 2639
consensus_1515#1      CTACCCAAACAAGCCCAGCTCACCAGCCAGCTCAATCCATGAGATCTAGAAGGACAGGTG 361
                      ************************************************************

consensus_1515#0      GCACATGGGCCAGGCCTCGAGACTCTGATGATGGGTATTCAAGTGACTCGGTACTGAAGC 2699
consensus_1515#1      GCACATGGGCCAGGCCTCGAGACTCTGATGATGGGTATTCAAGTGACTCGGTACTGAAGC 421
                      ************************************************************

consensus_1515#0      ACACATCAAGTAATAGCAGAAAGTTGGGTCAGCGATTATTTGTTTTTGTTATTGGTGGTG 2759
consensus_1515#1      ACACATCAAGTAATAGCAGAAAGTTGGGTCAGCGATTATTTGTTTTTGTTATTGGTGGTG 481
                      ************************************************************

consensus_1515#0      CTACTCGATCTGAGTTATGTGCTGCTCACAAGCTATCATCAAAACTGAAGAGAGAAATTA 2819
consensus_1515#1      CTACTCGATCTGAGTTATGTGCTGCTCACAAGCTATCATCAAAACTGAAGAGAGAAATTA 541
                      ************************************************************

consensus_1515#0      TCCTTGGCTCCTCTAGTCTTGATGATCCACCCCAGTTCATCACTGTAAGTTTCTTGTTCA 2879
consensus_1515#1      TCCTTGGCTCCTCTAGTCTTGATGATCCACCCCAGTTCATCACT---------------- 585
                      ********************************************                

consensus_1515#0      TGTCTCCTCTCCAATATGCTTGTTGTACCAAGAACTTGTTAACATGTTATTATTTGCAGA 2939
consensus_1515#1      -----------------------------------------------------------A 586
                                                                                 *

consensus_1515#0      AATTAAAAATGTTATCAACCGATGATTTGACACTTGACGATCTACAGATATAACAATATA 2999
consensus_1515#1      AATTAAAAATGTTATCGACCGATGATTTGACACTTGACGATCTACAGATATAACAATATA 646
                      **************** *******************************************

consensus_1515#0      CAAAGGCCTCTTTCTTGACTTTCTCTTTTATAATCATTTGCTGATCTTTTTTCTATTATA 3059
consensus_1515#1      CAAAGGCCTCTTTCTTGACTTTCTCTTTTATAATCATTTGCTGATCTTTTTTCTATTATA 706
                      ************************************************************

consensus_1515#0      GAACTCTATGAGTGCGCATATAACGTTGTGTCGAAAAGTTTACACAGGTTCCCATTAAAC 3119
consensus_1515#1      GAACTCTATGAGTGCGCATATAACATTGNGTCAAAAAGNTTACACAGGGTNCCATTAAAC 766
                      ************************ *** *** ***** ********* * *********

consensus_1515#0      TACAGGCTTACAGCCTAGTGTGCCTATAATATAGCAGTGTGCCAGAAACTGTATTATGAG 3179
consensus_1515#1      TACAGGCTTACAGNCTAGNGNGCCTATAATATAGCAGNGNGCCAGAAACTGNAATATGAA 826
                      ************* **** * **************** * *********** * ***** 

consensus_1515#0      ATTGGTGGACAATATGTTCGTTATCGTGTACTTCACTAATTTCTTTCTTCTTTTGGACGC 3239
consensus_1515#1      ATTGGNGGGCAATATGGTCGNTATCGGGGACTT-ACTAATTTCTTTCTTCTTTT------ 879
                      ***** ** ******* *** ***** * **** ********************      

consensus_1515#0      GAATAATTATTCTGAATTGGTTTTACTAGTAAAAGTTGTGATGAAGTGGTGAGCAAAGGT 3299
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      TGCTACTTCCTTTGTTTCACATGGATCTATGTATTTGTTCCATACATATGTCCAAATTTA 3359
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      TATTGATGTTAGTGAATCTGGATGAGTAATGAAGGGGCTAGGAGTCTATGGAAAAGACGA 3419
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      GCGAGGAAGAGCTCGTAGTCCCCGACTCCATGGACGCGGCCGGTGAGGAAGTGCTCGTGG 3479
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      TCACCAACTCCATGGATGATGAGGTCCGCGAGGAGGTGCACGTGACCGTTGACTATATAG 3539
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      ACGATGAGGCCAGCGAGGAAGGGCATGTGGTTGTCGTGGCCGGCGAGGTGGCCGGCGAGG 3599
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      AAGTGCACGTGGTTGCCGACTCTATGGACGTCGCGGCCGGCAAGGAAGTGCACGGGGTTG 3659
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      CTGACCCCATGGACGACGAGGCCGGAGAGGAAGTGCTCGTGGTCGCCGGCTCCATGGACG 3719
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      AAGATGAGGAGTGTCCTGGCACCGGCGACACCAACATCGAGAGGAGTGTGTCGCCGCTGG 3779
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      TGCTGGTGACAACAACGATGAGGAGATTGAAGAACAGGACTTGCATAAGCAAAAGGTGCA 3839
consensus_1515#1      ------------------------------------------------------------
                                                                                  

consensus_1515#0      TTGTTGAAGCTTCTTCTACCTACTTATTTTCCAAAAGAAAAGAAAT 3885
consensus_1515#1      ----------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)