cluster # 15150

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Oryza sativa
cluster # 15150 cluster # 15150 Sequences # 20 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15150#0 length = 1424 sequences # 15

consensus_15150#1 length = 663 sequences # 4
consensus_15150#2 length = 525 sequences # 1

consensusID : consensus_15150#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1424
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTATACTAGTATAGTACA-GTTTTTACA-TTAGTTTGAAGGTGAAACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATAAACTGACAAGGAAGTCCAGACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAAAATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGATCCCCCAGGTTCTAAAACTTTTTACATGACAGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAAGGGTGCGACGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGGATGGAGGGTAGGGCGGTGGGTAGGCATAACCCGGCCCGGGCGGGTAGTATCCGGCAGGGAATGCGAACCTT-GGATAATGCAGGTATAGGTTCGCGGCGGCAATGGCGGCGGGGTCTTTCTCTTTGTCCTTGTCCTTCTCCTCGCCATCGGCATTGCCACCCTCCTTCTCC-TTCTCCTTCTCTTCCTTCTTCTCATCTCCGCCACCA-TTGCCACCTTCCTC-TTTTCCATCCTTCTTCTCCTCCTTCTCGTCCTTCT-TCTCATCGCCGCCTTCGGCTGCCTTCTTCTCATCGCCACCTTCGGCTGCCACCTTCTCGGGAGGGGCTACCGGTTCAGACTTGATGATGGCAGCGTGCTTGCCGGTGCGCTTGTGCACGTACTCGGCCAGCTTGGCCTCCTCAAACACACCCTTCACGGTTACCTCCGACGCCTTCAGGTCAGGCTCAGCTGATTGTACCCCTTTCATCTTGAGGATCCTCTTCCTGATCCCCTGAGCACAGGCCTCACAATGCATGTGCACCTTCAGCACAACCGCGATCACCGGCGGCTCCTTCTTCTCCTCAGGCTTTGGAGGCTCAGGTTCCTCTTTCTTCTCCTCTTCCTTC-TTCTCCTCCGGTGGAGGAGGCATCGGCGACAGGAGCTCCACCTTCCGGCCGGTCTTCTTCTGAACTCGCTCCACCACCTTCATCGGGTCTGCAGCCGCCTTCTTCCCTTTCACCAACACCTTGTGCGCCTTCGAGTCGGCGATCACATCCTCCACTCCATCGAATCCCTTGAGGATCTTCCGGACCTTCCTGGNGCAGCCCTNGCAGTGCATGTAAAC-GNGCATCACCACCTCCTNCCGGCGGCGGCGGCGGCGGTGGAGCGTCCGCCGCCGNAGCCNCCTCGCCGTCCTTCTTCTCCTCGCCGCCGCCGCCGTCCTTCCCCTTCTCCCCTTCCTCCTTGGGCTTCTCCTCCTTCTTGCCTTCCTCCTGC]

[+] EMBL CF308034             [TTTTTTTTTTTTTTTTTTTTATACTGGTATAGTACA GTTTTTACA TTAGTTTGAAGGTGAAACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATAAACTGACAAGGAAGTCCAAACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAAAATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAAATCCCCCAGGTTCTAAAACTTTTTACATGACAGAGCAGGCATTCGGGTTTTCGTCGCTGAAAATCTGCGACGGGTGGTGCGAAGGGTGCGACGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL AU093651             [               TTTTTATACTAGTATAGTACA GTTTTTACA TTAGTTTGAAGGTGAAACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATAAACTGACAAGGAAGTCCAGACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAAAATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGATCCCCCAGGTTCTAAAACTTTTTACATGACAGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAAGGGTGCGACGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGGATGGAGGGTANGGCGGTGGGTAGGCATAACCCGGCCCGGGCGGGTAGTATCCGGCAAGGAATGCGAACCTTGGGATAATGCAGGTATAGGTTCGCGGCGGCAATGGCGGCGGGGTCTTTCTCTTTGTCCTTNTCCTTCTCCTCGCCATCGGCATTGCCAACCTCCTTCTCCTTTCTCCTTCTCTTCCTTCNTCTCATCTCCGCCACCATTTGCCACCTNCCTCTTTTTCCATCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL AU183298             [               TTTTTATACTAGTATAGTACA ATTTTTACA TTAGTTTGAAGGTGAAACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATAAACTGACAAGGAAGTCCAGACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAAAATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGATCCCCCAGGTTCTAAAACTTTTTACATGACAGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAAGGGTGCGACGGGTATGGCGGGTAGGATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB652842             [                aaTTATACTAGTATAGTACA GTTTTTACA TTAGTTTGAAGGTGAAACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATAAACTGACAAGGAAGTCCAGACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAAAATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGGCCTGTGCTCTTCTTATTCTTTTTCACTCTAGATCCCCCAGGGTCTAAAACTTTTTACATGACAGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAAGGGTGCGACGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGGATGGAGGGTAGGGCGGTGGGTAGGCATAACCCGGCCCGGGCGGGTAGTATCCGGCAGGGAATGCGAACCTT GGATAATGCAGGTATAGGTTCGCGGCGGCAATGGCGGCGGGGTCTTTCTCTTTGTCCTTGTCCTTCTCCTCGCCATCGGCATTGCCACCCTCCTTCTCC TTCTCCTTCTCTTCCTTCTTCTCATCTCCGCCACCA TTGCCACCTTCCTC TTTTCCATCCTTCTTCTCCTCCTTCTCGTCCTTCT TCTCATCGCCGCCTTCGGCTGCCTTCTTCTCATCGCCACCTTCGGCTGCCACCTTCTCGGGAGGGGCTACCGGTTCAGACTTGATGATGGCAGCGTGCTTGCCGGTGCGCTTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB655751             [                      ACTAGNATAGTACA GTTTTTCCT TTAGTTTGAAGGTGAAACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATAAACTGACAAGGAAGTCCAGACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAAAATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTTTTCAAGCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGATCCCCCAGGTTCTAAAACTTTTTACATGACAGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAAGGGTGCGACGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGGATGGAGGGTAGGGCGGTGGGTAGGCATAACCCGGCCCGGGCGGGTAGTATCCGGCAGGGAATGCGAACCTT GGATAATGCAGGTATAGGTTCGCGGCGGCAATGGCGGCGGGGTCTTTCTCTTTGTCCTTGTCCTTCTCCTCGCCATCGGCATTGCCACCCTCCTTCTCC TTCTCCTTCTCTTCCTTCTTCTCATCTCCGCCACCA TTGCCACCTTCCTC TTTTCCATCCTTCTTCTCCTCCTTCTCGTCCTTCT TCTCATCGCCGCCTTCGGCTGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB650441             [                             TAGTACAGGTTTTTACACTTAGTTTGAAGGGGAAACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATAAACTGACAAGGAAGTCCAGACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAAAATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGATCCCCCAGGTTCTAAAACTTTTTACATGACAGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAAGGGTGCGACGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGGATGGAGGGTAGGGCGGTGGGTAGGCATAACCCGGCCCGGGCGGGTAGTATCCGGCAGGGAATGCGAACCTT GGATAATGCAGGTATAGGTTCGCGGCGGCAATGGCGGCGGGGTCTTTCTCTTTGTCCTTGTCCTTCTCCTCGCCATCGGCATTGCCACCCTCCTTCTCC TTCTCCTTCTCTTCCTTCTTCTCATCTCCGCCACCA TTGCCACCTTCCTC TTTTCCATCCTTCTTCTCCTCCTTCTCGTCCTTCT TCTCATCGCCGCCTTCGGCTGCCTTCTTCTCATCGCCACCTTCGGCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB662020             [                             TAGTACA GTTTTTACA TTAGTTTGAAGGTGAAACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATAAACTGACAAGGAAGTCCAGACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAAAATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGATCCCCCAGGTTCTAAAACTTTTTACATGACAGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAAGGGTGCGACGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGGATGGAGGGTAGGGCGGTGGGTAGGCATAACCCGGCCCGGGCGGGTAGTATCCGGCAGGGAATGCGAACCTT GGATAATGCAGGTATAGGTTCGCGGCGGCAATGGCGGCGGGGTCTTTCTCTTTGTCCTTGTCCTTCTCCTCGCCATCGGCATTGCCACCCTCCTTCTCC TTCTCCTTCTCTTCCTTCTTCTCATCTCCGCCACCA TTGCCACCTTCCTC TTTTCCATCCTTCTTCTCCTCCTTCTCGTCCTTCT TCTCATCGCCGCCTTCGGCTGCCTTCTTCTCATCGCCACCTTCGGCTGCCACCTTCTCGGGAGGGGCTACCGGTTCAGACTTGATGATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB650299             [                                                                                           gaagaCAACCGAAAGCTAAGCAGGAGCTCCAGACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAAAATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGATCCCCCAGGTTCTAAAACTTTTTACATGACAGAGCAGGCATTCGGGTTTTCGTCGCTGAAAATCTGCGACGGGTGGTGCGAAGGGTGCGACGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGGATGGAGGGTAGGGCGGTGGGTAGGCATAACCCGGCCCGGGCGGGTAGTATCCGGCAGGGAATGCGAACCTT GGATAATGCAGGTATAGGTTCGCGGCGGCAATGGCGGCGGGGTCTTTCTCTTTGTCCTTGTCCTTCTCCTCGCCATCGGCATTGCCACCCTCCTTCTCC TTCTCCTTCTCTTCCTTCTTCTCATCTCCGCCACCA TTGCCACCTTCCTC TTTTCCATCCTTCTTCTCCTCCTTCTCGTCCTTCT TCTCATCGCCGCCTTCGGCTGCCTTCTTCTCATCGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL AU183297             [                                                                                                                                                                                                   CCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGATCCCCCAGGTTCTAAAACTTTTTACATGACAGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAAGGGTGCGACGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGGATGGAGGGTAGGGCGGTGGGTAGGCATAACCCGGCCCGGGCGGGTAGTATCCGGCAGGGAATGCGAACCTT GGATAATGCAGGTATAGGTTCGCGGCGGCAATGGCGGCGGGGTCTTTCTCTTTGTCCTTGTCCTTCTCCTCGCCATCGGCATTGCCACCCTCCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB655750             [                                                                                                                                                                                                                                                                                                                                                                                                                                            GGATGGCTGGTATGGTGGCGGGTAGGATGGAGGGTAGGGCGGTGGGTAGGCATAACCCGGCCCGGGCGGGTAGTATCCGGCAGGGAATGCGAACCTT GGATAATGCAGGTATAGGTTCGCGGCGGCAATGGCGGCGGGGTCTTTCTCTTTGTCCTTGTCCTTCTCCTCGCCATCGGCATTGCCACCCTCCTTCTCC TTCTCCTTCTCTTCCTTCTTCTCATCTCCGCCACCA TTGCCACCTTCCTC TTTTCCATCCTTCTTCTCCTCCTTCTCGTCCTTCT TCTCATCGCCGCCTTCGGCTGCCTTCTTCTCATCGCCACCTTCGGCTGCCACCTTCTCGGGAGGGGCTACCGGTTCAGACTTGATGATGGCAGCGTGCTTGCCGGTGCGCTTGTGCACGTACTCGGCCAGCTTGGCCTCCTCAAACACACCCTTCACGGTTACCTCCGACGCCTTCAGGTCAGGCTCAGCTGATTGTACCCCTTTCATCTTGAGGATCCTCTTCCTGATCCCCTGAGCACAGGCCTCACAATGCATGTGCACCTTCAGCACAACCGCGATCACCGGCGGCTCCTTCTTCTCCTCAGGCTTTGGAGGCTCAGGTTCCTCTTTCTTCTCCTCTTCCTTC TTCTCCTCCGGTGGAGGAGGCATCGGCGACAGGAGCTCCACCTTCCGGCCGGTCTTCTTCTGAACTCGCTCCACCACCTTCATCGGGTCTGCAGCCGCCTTCTTCCCTTTCACCAACACCTTGTGCGCCTTCGAGTCGGCGATCACATCCTCCACTCCATCGAATGCCTTGA                                                                                                                                                                                                       ]
[-] EMBL AA750613             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCGGGCGGGTAGTATCCGGCAGGGAATGCGAACCTT GGATAATGCAGGTATAGGTTCGCGGCGGCAATGGCGGCGGGGTCTTTCTCTTTGTCCTTGTCCTTCTCCTCGCCATCGGCATTGCCACCCTCCTTCTCC TTCTCCTTCTCTTCCTTCTTCTCATCTCCGCCACCA TTGCCACCTTCCTC TTTTCCATCCTTCTTCTCCTCCTTCTCGTCCTTCTCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL AU173256             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GATGATGGCAGCGTGCTTGCCGGTGCGCTTGTGCACGTACTCGGCCAGCTTGGCCTCCTCAAACACACCCTTCACGGTTACCTCCGACGCCTTCAGGTCAGGCTCAGCTGATTGTACCCCTTTCATCTTGAGGATCCTCTTCCTGATCCCCTGAGCACAGGCCTCACAATGCATGTGCACCTTCAGCACAACCGCGATCACCGGCGGCTCCTTCTTCTCCTCAGGCTTTGGAGGCTCAGGTTCCTCTTTCTTCTCCTCTTCCTTC TTCTCCTCCGGTGGAGGAGGCATCGGCGACAGGAGCTCCACCTTCCGGCCGGTCTTCTTCTGAACTCGCTCCACCACCTTCATCGGGTCTGCAGCCGCCTTCTTCCCTTTCACCAACACCTTGTGCGCCTTCGAGTCGGCGATCACATCCTCCACTCCATCGAATCCC                                                                                                                                                                                                           ]
[-] EMBL OSR18751A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTCATCTTGAGGATCCTCTTCCTGATCCCCTGAGCACAGGCCTCACAATGCATGTGCACCTTCAGCACAACCGCGATCACCGGCGGCTCCTTCTTCTCCTCAGGCTTTGGAGGCTCAGGTTCCTCTTTCTTCTCCTCTTCCTTC TTCTCCTCCGGTGGAGGAGGCATCGGCGACAGGAGCTCCACCTTCCGGCCGGTCTTCTTCTGAACTCGCTCCACCACCTTCATCGGGTCTGCAGCCGCCTTCTTCCCTTTCACCAACACCTTGTGCGCCTTCGAGTCGGCGATCACATCCTCCACTCCATCGAATCCC                                                                                                                                                                                                           ]
[-] EMBL AU093650             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCTCCTTCTTCTCCTAAGGCTTTGGAGGCTNAGGTTCCTCTTTCTTCTCCTCTTCCTTC TTCTCCTCCGGTGAAGAAGGCATCGGCGANAGAAGCTCCACCTTCCGGCCGGTCTTCTTCTGAACTCGCTCCACCACCTTCATCGGGTCTGNAGCCGCCTTCTTCCCTTTCACCAACACCTTGTGCGCCTTCGAGTCGGNGATNACANCCTCCACTCCATCGAATCCCTTGAGGATCTTCCGGACCTTCCTGGNGCAGCCCTNGCAGTGCATGTAAAC GNGCATCACCACCTCCTNCCGGCGGCGGCGGCGGCGGTGGAGCGTCCGCCGCCGNAGCCNCCTCGCCGTCCTTCTTCTCCTCGCCGCCGCCGCCGTCCTTCCCCTTCTCCCCTTCCTCCTTGGGCTTCTCCTCCTTCTTGCCTTCCTCCTGC]
[-] EMBL C74547               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      cttaAGGCTTTGGAGGCTNAGGTTCCTCTTTCTTCTCCTCTTCCTTCTTTCTCCTCCGGTGGAGGAGGCATCGGCGACAGGAGCTCCACCTTCCGGCCGGTCTTCTTCTGAACTCGCTCCACCACCTTCATCGGGTCTGCAGCCGCCTTCTTCCCTTTCACCAACACCTTGTGCGCCTTCGAGTCGGCGATCACATCCTCCACTCCATCGAATCCCTTGAGGATCTTCCGGACCTTCCTGGCGCAGCCCTCGCAGTGCATGTAGACTAAGCATCACCACCTCCTACCGGCGGCGNCGGCGGCGGTGGAGCGTCCGCCGCCGCAGCCg                                                                                            ]




>consensus_15150#0
TTTTTTTTTTTTTTTTTTTTATACTAGTATAGTACAGTTTTTACATTAGTTTGAAGGTGA
AACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATAAACTGACAAGGAAGTCCA
GACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAAAATTACAAAAGAAAGTTA
AAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTG
CTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTT
CTTATTCTTTTTCACTCTAGATCCCCCAGGTTCTAAAACTTTTTACATGACAGAGCAGGC
ATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAAGGGTGCGACGGGTATGG
CGGGTAGGATGGCTGGTATGGTGGCGGGTAGGATGGAGGGTAGGGCGGTGGGTAGGCATA
ACCCGGCCCGGGCGGGTAGTATCCGGCAGGGAATGCGAACCTTGGATAATGCAGGTATAG
GTTCGCGGCGGCAATGGCGGCGGGGTCTTTCTCTTTGTCCTTGTCCTTCTCCTCGCCATC
GGCATTGCCACCCTCCTTCTCCTTCTCCTTCTCTTCCTTCTTCTCATCTCCGCCACCATT
GCCACCTTCCTCTTTTCCATCCTTCTTCTCCTCCTTCTCGTCCTTCTTCTCATCGCCGCC
TTCGGCTGCCTTCTTCTCATCGCCACCTTCGGCTGCCACCTTCTCGGGAGGGGCTACCGG
TTCAGACTTGATGATGGCAGCGTGCTTGCCGGTGCGCTTGTGCACGTACTCGGCCAGCTT
GGCCTCCTCAAACACACCCTTCACGGTTACCTCCGACGCCTTCAGGTCAGGCTCAGCTGA
TTGTACCCCTTTCATCTTGAGGATCCTCTTCCTGATCCCCTGAGCACAGGCCTCACAATG
CATGTGCACCTTCAGCACAACCGCGATCACCGGCGGCTCCTTCTTCTCCTCAGGCTTTGG
AGGCTCAGGTTCCTCTTTCTTCTCCTCTTCCTTCTTCTCCTCCGGTGGAGGAGGCATCGG
CGACAGGAGCTCCACCTTCCGGCCGGTCTTCTTCTGAACTCGCTCCACCACCTTCATCGG
GTCTGCAGCCGCCTTCTTCCCTTTCACCAACACCTTGTGCGCCTTCGAGTCGGCGATCAC
ATCCTCCACTCCATCGAATCCCTTGAGGATCTTCCGGACCTTCCTGGNGCAGCCCTNGCA
GTGCATGTAAACGNGCATCACCACCTCCTNCCGGCGGCGGCGGCGGCGGTGGAGCGTCCG
CCGCCGNAGCCNCCTCGCCGTCCTTCTTCTCCTCGCCGCCGCCGCCGTCCTTCCCCTTCT
CCCCTTCCTCCTTGGGCTTCTCCTCCTTCTTGCCTTCCTCCTGC

consensusID : consensus_15150#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 663
fasta sequence

                              [TTTTTTTACACCTAAAAATTATACTAGTATAGTACAGTTTTTACATTAGTTTGAAGGTGAAACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATAAACTGACAAGGAAGTCCAGACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAAAATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGATCCCCCAGGTTCTAAAACTTTTTACATGACAGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAAGGGTGCGACGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGGATGGAGGGTAGGGCGGTGGGTAGGCATAACCCGGCCCGGGCGGGTAGTATCCGGCAGGGAATGCGAACCTTGGATAATGCAGGTATAGGTTCGCGGCGGCAATNGCGGCGGGGTCTTTCTCTTTGTCCTTGTCCTTCTCCTCGCCATCGGCATTGCCACCCTNCTTCTCCTTNCTCCTTCTCTTCCTTCTGCTCATCTCCGGCCACCATTG]

[-] EMBL AU094830             [TTTTTTTACACCTAAAAATTATACTAGTATAGTACAGTTTTTACATTAGTTTGAAGGTGAAACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATAAACTGACAAGGAAGTCCAGACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAAAATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGATCCCCCAGGTTCTAAAACTTTTTACATGACAGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAAGGGTGCGACGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGGATGGAGGGTAGGGCGGTGGGTAGGCATAACCCGGCCCGGGCGGGTAGTATCCGGCAGGGAATGCGAACCTTGGATAATGCAGGTATAGGTTCGCGGCGGCAATNGCGGCGGGGTCTTTCTCTTTGTCCTTGTCCTTCTCCTCGCCATCGGCATTGCCACCCTNCTTCTCCTTNCTCCTTCTCTTCCTTCTGCTCATCTCCGGCCACCATTG]
[-] EMBL CF308035             [                                 ACAGTTTTTACATTAGTTTGAAGGTGAAACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATAAACTGACAAGGAAGTCCAGACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAAAATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGATCCCCCAGGTTCTAAAACTTTTTACATGACAGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAAGGGTGCGACGG                                                                                                                                                                                                                                                         ]
[-] EMBL AU173257             [                                                                              tTTTTACATAAGATAGCATCCATAAACTGACAAGGAAGTCCAGACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAAAATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGATCCCCCAGGTTCTAAAACTTTTTACATGACAGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAAGGGTGCGACGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGGATGGAGGGTAGGGCGGTGGGTAGGCATAACCCGGCCCGGGCGGGTAGTATCCGGCAG                                                                                                                                                          ]
[-] EMBL AU184296             [                                                                              tTTTTACATAAGATAGCATCCATAAACTGACAAGGAAGTCCAGACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAAAATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGATCCCCCAGGTTCTAAAACTTTTTACATGACAGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAAGGGTGCGACGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGGATGGAGGGTAGGGCGGTGGGTAGGCATAACCCGGCCCGGGCGGGTAGTATCCGGCA                                                                                                                                                           ]




>consensus_15150#1
TTTTTTTACACCTAAAAATTATACTAGTATAGTACAGTTTTTACATTAGTTTGAAGGTGA
AACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATAAACTGACAAGGAAGTCCA
GACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAAAATTACAAAAGAAAGTTA
AAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTG
CTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTT
CTTATTCTTTTTCACTCTAGATCCCCCAGGTTCTAAAACTTTTTACATGACAGAGCAGGC
ATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAAGGGTGCGACGGGTATGG
CGGGTAGGATGGCTGGTATGGTGGCGGGTAGGATGGAGGGTAGGGCGGTGGGTAGGCATA
ACCCGGCCCGGGCGGGTAGTATCCGGCAGGGAATGCGAACCTTGGATAATGCAGGTATAG
GTTCGCGGCGGCAATNGCGGCGGGGTCTTTCTCTTTGTCCTTGTCCTTCTCCTCGCCATC
GGCATTGCCACCCTNCTTCTCCTTNCTCCTTCTCTTCCTTCTGCTCATCTCCGGCCACCA
TTG

consensusID : consensus_15150#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 525
fasta sequence

                              [TTTTTAGGACAGGGGAACCAAAGGTACACCTAAAAATTATACTAGTATAGTACAGTTTTTACATTAGTTTGAAGGTGAAACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATGAACTGACAAGGAAGTCCAGACTTGCTTGTAGTTTATACTAGATGAAAGAAAAGGGTAAAAATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGACCCCCCAGGTTCTAAAACTTTTTACATGACGGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAAGGGTGCGATGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGGGCGGTGGGTAGGCATAGCCCGGCCGGGCGGGTAGTATCCGGCAGGGAATGCGAACC]

[-] EMBL BI796781             [TTTTTAGGACAGGGGAACCAAAGGTACACCTAAAAATTATACTAGTATAGTACAGTTTTTACATTAGTTTGAAGGTGAAACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATGAACTGACAAGGAAGTCCAGACTTGCTTGTAGTTTATACTAGATGAAAGAAAAGGGTAAAAATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAGCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGACCCCCCAGGTTCTAAAACTTTTTACATGACGGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAAGGGTGCGATGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGGGCGGTGGGTAGGCATAGCCCGGCCGGGCGGGTAGTATCCGGCAGGGAATGCGAACC]




>consensus_15150#2
TTTTTAGGACAGGGGAACCAAAGGTACACCTAAAAATTATACTAGTATAGTACAGTTTTT
ACATTAGTTTGAAGGTGAAACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATG
AACTGACAAGGAAGTCCAGACTTGCTTGTAGTTTATACTAGATGAAAGAAAAGGGTAAAA
ATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAAG
CTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATTA
TGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGACCCCCCAGGTTCTAAAACTTTT
TACATGACGGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGAA
GGGTGCGATGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGGGCGGTGGGTAG
GCATAGCCCGGCCGGGCGGGTAGTATCCGGCAGGGAATGCGAACC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15150#0      ------------------TTTTTTTTTTTTTTTTTTTTATACTAGTATAGTACAGTTTTT 42
consensus_15150#1      ------------------TTTTTTTACACCTAAAAATTATACTAGTATAGTACAGTTTTT 42
consensus_15150#2      TTTTTAGGACAGGGGAACCAAAGGTACACCTAAAAATTATACTAGTATAGTACAGTTTTT 60
                                               *     *     ************************

consensus_15150#0      ACATTAGTTTGAAGGTGAAACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATA 102
consensus_15150#1      ACATTAGTTTGAAGGTGAAACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATA 102
consensus_15150#2      ACATTAGTTTGAAGGTGAAACAGTACAGAGAGCAAAATTCTACATAAGATAGCATCCATG 120
                       *********************************************************** 

consensus_15150#0      AACTGACAAGGAAGTCCAGACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAA 162
consensus_15150#1      AACTGACAAGGAAGTCCAGACTTGCTTTGTAGTTTATACCAGATGAAAGAAAAGGGTTAA 162
consensus_15150#2      AACTGACAAGGAAGTCCAGACTTGCTT-GTAGTTTATACTAGATGAAAGAAAAGGGTAAA 179
                       *************************** *********** ***************** **

consensus_15150#0      AATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAA 222
consensus_15150#1      AATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAA 222
consensus_15150#2      AATTACAAAAGAAAGTTAAAAAGAAACCTAACCCCCAAAAAAGCCTGGTACTTTCTTCAA 239
                       ************************************************************

consensus_15150#0      GCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATT 282
consensus_15150#1      GCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATT 282
consensus_15150#2      GCTGCCATTTTAGCTTTGCTTTGCTCAAAGGGCAATTGTTGCAATGACACCCTCCAAATT 299
                       ************************************************************

consensus_15150#0      ATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGATCCCCCAGGTTCTAAAACTTT 342
consensus_15150#1      ATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGATCCCCCAGGTTCTAAAACTTT 342
consensus_15150#2      ATGCAGTCCTGTGCTCTTCTTATTCTTTTTCACTCTAGACCCCCCAGGTTCTAAAACTTT 359
                       *************************************** ********************

consensus_15150#0      TTACATGACAGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGA 402
consensus_15150#1      TTACATGACAGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGA 402
consensus_15150#2      TTACATGACGGAGCAGGCATTCGGGTTTTCGTCGCTGAAGATCTGCGACGGGTGGTGCGA 419
                       ********* **************************************************

consensus_15150#0      AGGGTGCGACGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGGATGGAGGGTA 462
consensus_15150#1      AGGGTGCGACGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGGATGGAGGGTA 462
consensus_15150#2      AGGGTGCGATGGGTATGGCGGGTAGGATGGCTGGTATGGTGGCGGGTAGG---------- 469
                       ********* ****************************************          

consensus_15150#0      GGGCGGTGGGTAGGCATAACCCGGCCCGGGCGGGTAGTATCCGGCAGGGAATGCGAACCT 522
consensus_15150#1      GGGCGGTGGGTAGGCATAACCCGGCCCGGGCGGGTAGTATCCGGCAGGGAATGCGAACCT 522
consensus_15150#2      --GCGGTGGGTAGGCATAGCCCGGCC-GGGCGGGTAGTATCCGGCAGGGAATGCGAACC- 525
                         **************** ******* ******************************** 

consensus_15150#0      TGGATAATGCAGGTATAGGTTCGCGGCGGCAATGGCGGCGGGGTCTTTCTCTTTGTCCTT 582
consensus_15150#1      TGGATAATGCAGGTATAGGTTCGCGGCGGCAATNGCGGCGGGGTCTTTCTCTTTGTCCTT 582
consensus_15150#2      ------------------------------------------------------------
                                                                                   

consensus_15150#0      GTCCTTCTCCTCGCCATCGGCATTGCCACCCTCCTTCTCCTTC-TCCTTCTCTTCCTTCT 641
consensus_15150#1      GTCCTTCTCCTCGCCATCGGCATTGCCACCCTNCTTCTCCTTNCTCCTTCTCTTCCTTCT 642
consensus_15150#2      ------------------------------------------------------------
                                                                                   

consensus_15150#0      TCTCATCTCCG-CCACCATTGCCACCTTCCTCTTTTCCATCCTTCTTCTCCTCCTTCTCG 700
consensus_15150#1      GCTCATCTCCGGCCACCATTG--------------------------------------- 663
consensus_15150#2      ------------------------------------------------------------
                                                                                   

consensus_15150#0      TCCTTCTTCTCATCGCCGCCTTCGGCTGCCTTCTTCTCATCGCCACCTTCGGCTGCCACC 760
consensus_15150#1      ------------------------------------------------------------
consensus_15150#2      ------------------------------------------------------------
                                                                                   

consensus_15150#0      TTCTCGGGAGGGGCTACCGGTTCAGACTTGATGATGGCAGCGTGCTTGCCGGTGCGCTTG 820
consensus_15150#1      ------------------------------------------------------------
consensus_15150#2      ------------------------------------------------------------
                                                                                   

consensus_15150#0      TGCACGTACTCGGCCAGCTTGGCCTCCTCAAACACACCCTTCACGGTTACCTCCGACGCC 880
consensus_15150#1      ------------------------------------------------------------
consensus_15150#2      ------------------------------------------------------------
                                                                                   

consensus_15150#0      TTCAGGTCAGGCTCAGCTGATTGTACCCCTTTCATCTTGAGGATCCTCTTCCTGATCCCC 940
consensus_15150#1      ------------------------------------------------------------
consensus_15150#2      ------------------------------------------------------------
                                                                                   

consensus_15150#0      TGAGCACAGGCCTCACAATGCATGTGCACCTTCAGCACAACCGCGATCACCGGCGGCTCC 1000
consensus_15150#1      ------------------------------------------------------------
consensus_15150#2      ------------------------------------------------------------
                                                                                   

consensus_15150#0      TTCTTCTCCTCAGGCTTTGGAGGCTCAGGTTCCTCTTTCTTCTCCTCTTCCTTCTTCTCC 1060
consensus_15150#1      ------------------------------------------------------------
consensus_15150#2      ------------------------------------------------------------
                                                                                   

consensus_15150#0      TCCGGTGGAGGAGGCATCGGCGACAGGAGCTCCACCTTCCGGCCGGTCTTCTTCTGAACT 1120
consensus_15150#1      ------------------------------------------------------------
consensus_15150#2      ------------------------------------------------------------
                                                                                   

consensus_15150#0      CGCTCCACCACCTTCATCGGGTCTGCAGCCGCCTTCTTCCCTTTCACCAACACCTTGTGC 1180
consensus_15150#1      ------------------------------------------------------------
consensus_15150#2      ------------------------------------------------------------
                                                                                   

consensus_15150#0      GCCTTCGAGTCGGCGATCACATCCTCCACTCCATCGAATCCCTTGAGGATCTTCCGGACC 1240
consensus_15150#1      ------------------------------------------------------------
consensus_15150#2      ------------------------------------------------------------
                                                                                   

consensus_15150#0      TTCCTGGNGCAGCCCTNGCAGTGCATGTAAACGNGCATCACCACCTCCTNCCGGCGGCGG 1300
consensus_15150#1      ------------------------------------------------------------
consensus_15150#2      ------------------------------------------------------------
                                                                                   

consensus_15150#0      CGGCGGCGGTGGAGCGTCCGCCGCCGNAGCCNCCTCGCCGTCCTTCTTCTCCTCGCCGCC 1360
consensus_15150#1      ------------------------------------------------------------
consensus_15150#2      ------------------------------------------------------------
                                                                                   

consensus_15150#0      GCCGCCGTCCTTCCCCTTCTCCCCTTCCTCCTTGGGCTTCTCCTCCTTCTTGCCTTCCTC 1420
consensus_15150#1      ------------------------------------------------------------
consensus_15150#2      ------------------------------------------------------------
                                                                                   

consensus_15150#0      CTGC 1424
consensus_15150#1      ----
consensus_15150#2      ----