These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15169#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 2063 fasta sequence [ATCTCTGCCGCCCCGGTTTCCCATCTCCGCCCGCAGTAAACCCCTCCTCATTCCCACCACCACCTCTCCTCGGAGGAATCTTTGCTGCTTTCCTTTATATAAACCCCTCTCCAGTCTATACTTCCACTCCACACTCCCCTCCACCCCCCCCCCCACACCCGCAGCAGCAGGGAGAAGACGACGACGAAGATGATGGATCTCGCCGACCCAAACCACCGGCTCATCGCCGGCGCGGCGCTGCTGGTGGCCACCCTCGCCTTCATCAAGCTGCTGCTGAGCTCCGCCGGCGGCGGCAAGAAGCGCCTCCCGCCGACCATCCCGGCGGCGCCGCTGGTGGGCGGGCTGCTCCGCTTCATGCGGGGGCCGATCCCGATGATCCGGGAGGAGTACGCCCGCCTCGGCAGCGTCTTCACCGTCCCCATCCTCAGCCGCAAGATCACCTTCCTCATCGGCCCCGAGGTGTCGGCGCACTTCTTCAAGGGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGCCCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACCGAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAGGAGTACTTCTCTAAGTGGGGAGAAAGTGGAACGGTGGATCTGAAGTATGAGCTGGAGCATCTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGA-GGGAGGTGCGAGAAAAGCTCTTTGATGATGTTTCTTCTCTCTTCCATGATCTGGACAATGGGATGCAGCCAGTCAGTGTCATCTTCCCCTACCTCCCAATTCCTGCACACCG-CCGCCGTGACCGGGCACGGCAACGGTTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACGGGCTGAGGAAGACATGCTGCAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCACCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCGCTACGCACCAGGCAGGGAGGAGGACAAGGCAGCGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCA-CGGTTGCCTCGGTGAGCCCTTCGCCTACCTAC-AGATCAAGGCCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTGGTCTCCCCCTTCCCGGAGACC-AACTGGAAAGCC-ATGGTCGTCGGCATCAAGGACG-AGGTGATGGTCAACTTCAAGCGGCGGAAGCTC-GTCGTC-GACAACTAGGATGCCACCTTCAACCTTAGGAGTCGATG-CTTGTCGCGCTTTTCGCC-TT-TTTTCTCTTCTTTTCCCTTTCTGTCAGTAT-TTGATCCGT-GT-AAG-TTTCT-GCCAGCTTTGT-ATT-AGGGTGT-TTCAGTCGT-TTTAGGATCCTGTGATT--TGCTTCCT-GCCATGAAAAATCAAGC-TTGATCTCT-GCAACTTCTGT-ACCTCTGGGTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAAATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAGTTGTNTCAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK121491 [ATCTCTGCCGCCCCGGTTTCCCATCTCCGCCCGCAGTAAACCCCTCCTCATTCCCACCACCACCTCTCCTCGGAGGAATCTTTGCTGCTTTCCTTTATATAAACCCCTCTCCAGTCTATACTTCCACTCCACACTCCCCTCCACCCCCCCCCCCACACCCGCAGCAGCAGGGAGAAGACGACGACGAAGATGATGGATCTCGCCGACCCAAACCACCGGCTCATCGCCGGCGCGGCGCTGCTGGTGGCCACCCTCGCCTTCATCAAGCTGCTGCTGAGCTCCGCCGGCGGCGGCAAGAAGCGCCTCCCGCCGACCATCCCGGCGGCGCCGCTGGTGGGCGGGCTGCTCCGCTTCATGCGGGGGCCGATCCCGATGATCCGGGAGGAGTACGCCCGCCTCGGCAGCGTCTTCACCGTCCCCATCCTCAGCCGCAAGATCACCTTCCTCATCGGCCCCGAGGTGTCGGCGCACTTCTTCAAGGGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGCCCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACCGAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAGGAGTACTTCTCTAAGTGGGGAGAAAGTGGAACGGTGGATCTGAAGTATGAGCTGGAGCATCTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGA GGGAGGTGCGAGAAAAGCTCTTTGATGATGTTTCTTCTCTCTTCCATGATCTGGACGATGGGATGCAGCCAGTCAGTGTCATCTTCCCCTACCTCCCAATTCCTGCACACCG CCGCCGTGACCGGGCACGGCAACGGTTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACGGGCTGAGGAAGACATGCTGCAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCACCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCGCTACGCACCAGGCAGGGAGGAGGACAAGGCAACGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCA CGGTTGCCTCGGTGAGCCCTTCGCCTACCTAC AGATCAAGGCCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTGGTCTCCCCCTTCCCGGAGACC AACTGGAAAGCC ATGGTCGTCGGCATCAAGGACG AGGTGATGGTCAACTTCAAGCGGCGGAAGCTC GTCGTC GACAACTAGGATGCCACCTTCAACCTTAGGAGTCGATG CTTGTCGCGCTTTTCGCC TT TTTTCTCTTCTTTTCCCTTTCTGTCAGTAT TTGATCCGT GT AAG TTTCT GCCAGCTTTGT ATT AGGGTGT TTCAGTCGT TTTAGGATCCTGTGATT TGCTTCCT GCCATGAAAAATCAAGC TTGATCTCT GCAACTTCTGT ACCTCTGGGTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAAATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAG ] [+] EMBL AK060487 [ CCCTCCACCCCCCCCCCCACACCCGCAGCAGCAGGGAGAAGACGACGACGAAGATGATGGATCTCGCCGACCCAAACCACCGGCTCATCGCCGGCGCGGCGCTGCTGGTGGCCACCCTCGCCTTCATCAAGCTGCTGCTGAGCTCCGCCGGCGGCGGCAAGAAGCGCCTCCCGCCGACCATCCCGGCGGCGCCGCTGGTGGGCGGGCTGCTCCGCTTCATGCGGGGGCCGATCCCGATGATCCGGGAGGAGTACGCCCGCCTCGGCAGCGTCTTCACCGTCCCCATCCTCAGCCGCAAGATCACCTTCCTCATCGGCCCCGAGGTGTCGGCGCACTTCTTCAAGGGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGCCCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACCGAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAGGAGTACTTCTCTAAGTGGGGAGAAAGTGGAACGGTGGATCTGAAGTATGAGCTGGAGCATCTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGA GGGAGGTGCGAGAAAAGCTCTTTGATGATGTTTCTTCTCTCTTCCATGATCTGGACAATGGGATGCAGCCAGTCAGTGTCATCTTCCCCTACCTCCCAATTCCTGCACACCG CCGCCGTGACCGGGCACGGCAACGGTTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACGGGCTGAGGAAGACATGCTGCAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCACCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCGCTACGCACCAGGCAGGGAGGAGGACAAGGCAGCGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCA CGGTTGCCTCGGTGAGCCCTTCGCCTACCTAC AGATCAAGGCCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTGGTCTCCCCCTTCCCGGAGACC AACTGGAAAGCC ATGGTCGTCGGCATCAAGGACG AGGTGATGGTCAACTTCAAGCGGCGGAAGCTC GTCGTC GACAACTAGGATGCCACCTTCAACCTTAGGAGTCGATG CTTGTCGCGCTTTTCGCC TT TTTTCTCTTCTTTTCCCTTTCTGTCAGTAT TTGATCCGT GT AAG TTTCT GCCAGCTTTGT ATT AGGGTGT TTCAGTCGT TTTAGGATCCTGTGATT TGCTTCCT GCCATGAAAAATCAAGC TTGATCTCT GCAACTTCTGT ACCTCTGGGTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCT ] [+] EMBL CF322902 [ gCCCGATGATCCGGGAGGAGTACGCCCGCCTCGGCAGCGTCTTCACCGTCCCCATCCTCAGCCGCAAGATCACCTTCCTCATCGGCCCCTATGTGTCGGCGCACTTCTTCAAGGGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGCCCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACCGAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAGGAGTACTTCTCTAAGTGGGGAGAAAGTGGAACAGTGGATCTGAAGTATGAGCTGGAGCATCTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGA GGGAGGTGCGAGAAAAGCTCTTTGATGATGTTTCTGCTCTCTTCCATGATCTGGACAATGGGATGCAGCCAGTCAGTGTCATC ] [+] EMBL CF323919 [ gCCCGATGATCCGGGAGGAGTACGCCCGCCTCGGCAGCGTCTTCACCGTCCCCATCCTCAGCCGCAAGATCACCTTCCTCATCGGCCCCGAGGTGTCGGCGCACTTCTTCAAGGGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGCCCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACCGAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAGGAGTACTTCTCTAAGTGGGGAGAAAGTGGAACAGTGGATCTGAAGTATGAGCTGGAGCATCTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGAGGGGAGGTGCGAGAAAAGCTCTTTGATGATGTTTCTGCTCTCTTCCATGATCTGGACAATGGGATGCAGCCAGTCAGTGTCATCTTCCCCTACCTCCCAATTCCTGCACACCGNCCGCCGTGACCGGGCACGGCAACGATTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACAGGCTGAGGAAGACATGCTG ] [+] EMBL AB025047 [ TACGCCCGCCTCGGCAGCGTCTTCACCGTCCCCATCCTCAGCCGCAAGATCACCTTCCTCATCGGCCCCGAGGTGTCGGCGCACTTCTTCAAGGGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGCCCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACCGAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAGGAGTACTTCTCTAAGTGGGGAGAAAGTGGAACGGTGGATCTGAAGTATGAGCTGGAGCATCTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGA GGGAGGTGCGAGAAAAGCTCTTTGATGATGTTTCTTCTCTCTTCCATGATCTGGACAATGGGATGCAGCCAGTCAGTGTCATCTTCCCCTACCTCCCAATTCCTGCACACCG CCGCCGTGACCGGGCACGGCAACGGTTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACGGGCTGAGGAAGACATGCTGCAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCACCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCCGTACGCACCAGGCAGGGAGGAGGACAAGGCAGCGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCA CGGTTGCCTCGGTGAGCCCTTCGCCTACCTAC AGATCAAGGCCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTGGTCTCCCCCTTCCCGGAGACC AACTGGAAAGCC ATGGTCGTCGGCATCAAGGACG AGGTGATGGTCAACTTCAAGCGGCGGAAGCTC GTCGTC GACAACTAGGATGCCACCTTCAACCTTAGGAGTCGATG CTTGTCGCGCTTTTCGCCTTT TTTTCTCTTCTTTTCCCTTTCTGTCAGTAT TTGATCCGT GT AAG TTTCT GCCAGCTTTGT ATT AGGGTGT TTCAGTCGT TTTAGGATCCTGTGATT TGCTTCCT GCCATGAAAAATCAAGC TTGATCTCT GCAACTTCTGT ACCTCTGGGTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAAATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAG ] [+] EMBL CB624357 [ CCGCAAGATCACCTTCCTCATCGGCCCCGAGGTGTCGGCGCACTTCTTCAAGGGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGCCCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACCGAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAGGAGTACTTCTCTAAGTGGGGAGAAAGTGGAACGGTGGATCTGAAGTATGAGCTGGAGCATCTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGA GGGAGGTGCGAGAAAAGCTCTTTGATGATGTTTCTTCTCTCTTCCATGATCTGGACAATGGGATGCAGCCAGTCAGTGTCATCTTCCCCTACCTCCCAATTCCTGCACACCG CCGCCGTGACCGGGCACGGCAACGGTTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACGGGCTGAGGAAGACATGCTGCAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCACCGCTAATCATGCTGCTCCGCCAGTC ] [+] EMBL CB623104 [ CCGCAAGATCTCCTTCCTCATCGGCCCCGAGGTGTCGGCGCACTTCTTCAAGGGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGCCCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACCGAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAGGAGTACTTCTCTAAGTGGGGAGAAAGTGGAACGGTGGATCTGAAGTATGAGCTGGAGCATCTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGA GGGAGGTGCGAGAAAAGCTCTTTGATGATGTTTCTTCTCTCTTCCATGATCTGGACAATGGGATGCAGCCAGTCAGTGTCATCTTCCCCTACCTCCCAATTCCTGCACACCG CCGCCGTGACCGGGCACGGCAACGGTTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACGGGCTGAGGAAGACATGCTGCAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACANGTGCATCAGGGAGGC ] [+] EMBL CA757497 [ CGCCGTGACCGGGCACGGCAACGGTTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACAGGCTGAGGAAGACATGCTACAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTT ] [+] EMBL BE040549 [ CGCCGTGACCGGGCACGGCAACGGTTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACAGGCTGAGGAAGACATGCTACAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTT ] [+] EMBL AU173311 [ GCTGCAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCACCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGC ] [+] EMBL BE230302 [ ACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCGCCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCGCTACGCACCATGCAGGGAGGAGGACAAGGCAGCGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCA CGGTTGCCTCGGTGAGCCCTTCGCCTACCTACAAGATCAAGGGCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTGGTCT CCCCTT CCGGATA C AACTGGAAAAGC ATGGGCG CGGCATCAAGGACN AGGGGATGGGCAACTTCAAGCGGg ] [+] EMBL BE230288 [ ACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCGCCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCG TTCGCACCATGCAGGGAGGAGGACAAGGCAGCGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCACCGGTTG CTCGGTGAGCCCTTCG CTACCTACAAGATCAAGGGCATATGGACTCACCTGCTGAGG ACTTTGAGTTCAAACTGGCCT CCCCTTCCCGGAAACC AACTGGAAAG C ATGGcc ] [+] EMBL CF323845 [ CACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCGCCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCG ] [+] EMBL CF324233 [ AGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCGCCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCGCTACGCACCAGGCAGGGAGGAGGACAAGGCAGCGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCA CGGTTGCCTCGGTGAGCCCTTCGCCTACCTAC AGATCAAGGCCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTGGTCTCCCCCTTCCCGGAGACC AACTGGAAAGCCNATGGTCGTCGGCATCAAGGACGAAGGTGATGGTCAACTTCAAGCGGCGGAACCTC GTCGTC GACAACTAGGATGCCACCTTC ACCTTAGGAGTCGATG CTTGTCGCGCTTTTCGCC TT TTTTCTCTTCTTTTCCCTTTCTGT ] [-] EMBL CB624358 [ GTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCACCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCGCTACGCACCAGGCAGGGAGGAGGACAAGGCAGCGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCA CGGTTGCCTCGGTGAGCCCTTCGCCTACCTAC AGATCAAGGCCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTGGTCTCCCCCTTCCCGGAGACC AACTGGAAAGCC ATGGTCGTCGGCATCAAGGACG AGGTGATGGTCAACTTCAAGCGGCGGAAGCTC GTCGTC GACAACTAGGATGCCACCTTCAACCTTAGGAGTCGATG CTTGTCGCGCTTTTCGCC TT TTTTCTCTTCTTTTCCCTTTCTGTCAGTAT TTGATCCGT GT AAG TTTCT GCCAGCTTTGT ATT AGGGTGT TTCAGTCGT TTTAGGATCCTGTGATT TGCTTCCT GCCATGAAAAATCAAGC TTGATCTCT GCAACTTCTGT ACCTCTGGGTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAAATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAGT ] [-] EMBL CB623105 [ AATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCGCTACGCACCAGGCAGGGAGGAGGACAAGGCAGCGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCA CGGTTGCCTCGGTGAGCCCTTCGCCTACTTAC AGATCAAGGCCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTGGTCTCCCCCTTCCCGGAGACC AACTGGAAAGCC ATGGTCGTCGGCATCAAGGACG AGGTGATGGTCAACTTCAAGCGGCGGAAGCTC GTCGTC GACAACTAGGATGCCACCTTCAACCTTAGGAGTCGATG CTTGTCGCGCTTTTCGCC TT TTTTCTCTTCTTTTCCCTTTCTGTCAGTAT TTGATCCGT GT AAG TTTCT GCCAGCTTTGT ATT AGGGTGT TTCAGTCGT TTTAGGATCCTGTGATT TGCTTCCT GCCATGAAAAATCAAGC TTGATCTCT GCAACTTCTGT ACCTCTGGGTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATACGGCTTTGGACATAATGTCTGAAGTCTGAACAAATAATACTTATAT AAGTGGAATGGAAATGAGAATAA ] [+] EMBL BI805891 [ CCCTTCCCGGAGACCAAACTGGAAAGCC ATGGTCGTCGGCATCAAGGACG AGGTGATGGTCAACTTCAAGCGGCGGAAGCTCTGTCGTCTGACAACTAGGATGCCACCTTCAACCTTAGGAGTCGATGTCTTGTCGCGCTTTTCGCC TTNGTTTCTCTTCTTTTCCCTTTCTGTCAGTATGTTGAGCCGTGGTGAAGNTTGCTGGCCAGCTTTGTGATTGAGGGTGTGTTCAGTCGTGTTTAGGATCCTGTGATTGNGGCTTCCTGGCCATGAAAAATCAAGCGTTGATCTCTGGCAACTTCTGTGACCTCTGGGTTGCTTGGC ACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAAATAATACTTATATGTAATGGAATGGAAATGAGAATNAAACTAaaaaaaaaa ] [+] EMBL BE607441 [ AACTGGAAAGCC ATGGTCGTCGGCATCAAGGACG AGGTGATGGTCAACTTCAAGCGGCGGAAGCTC GTCGTC GACAACTAGGATGCCACCTTCAACCTTAGGAGTCGATG CTTGTCGCGCTTTTCGCC TT TTTTCTCTTCTTTTCCCTTTCTGTCAGTAT TTGATCCGT GT AAG TTTCT GCCAGCTTTGT ATT AGGGTGT TTCAGTCGT TTTAGGATCCTGTGATT TGCTTCCT GCCATGAAAAATCAAGC TTGATCTCT GCAGCTTCTGT ACCTCTGGGTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACTAATAATACTTA ] [+] EMBL AU173312 [ TAGGATGCCACCTTCAACCTTAGGAGTCGATG CTTGTCGCGCTTTTCGCC TT TTTTCTCTTCTTTTCCCNTTCTGTCAGTAT TTGATCCGT GT AAG TTTNT GCCAGCTTTGT ATT AGGGTGT TTCAGTCGT TTTAGGATCCTGTGATT TGCTTCCT GCCATGAAAAATCAAGC TTGATCTNT GCAACTTNTGT ACCTNTGGGTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTNTGAAGTNTGAACAAATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAGTTGTNTCAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_15169#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 470 fasta sequence [CTCACTGCTGAGACTTGAGTCAGCTGCTCCCCTCCCGAGCAACTGAAGCATGTCGCGCTCAAGGCGAGTGTGGTCAACTCAAGCGCGAAGCCGCGCGCAACTAGATGCACCTCAACCTAGAGCGATCTTGTCGGCTTTCGCCTTTTTCTCTTCTTTTCCCTTTCTGTCAGTATTTGATCCGTGTAAGTTTCTGCCAGCTTTGTATTAGGGTGTTTCAGTCGTTTTAGGATCCTGTGATTTCTTCCTGCCATGAAAAATCAAGCTTGATCTCTGCAACTTCTGTACCTCTGGGTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAAATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAGTTGTCT] [-] EMBL D42476 [CTCACTGCTGAGACTTGAGTCAGCTGCTCCCCTCCCGAGCAACTGAAGCATGTCGCGCTCAAGGCGAGTGTGGTCAACTCAAGCGCGAAGCCGCGCGCAACTAGATGCACCTCAACCTAGAGCGATCTTGTCGGCTTTCGCCTTTTTCTCTTCTTTTCCCTTTCTGTCAGTATTTGATCCGTGTAAGTTTCTGCCAGCTTTGTATTAGGGTGTTTCAGTCGTTTTAGGATCCTGTGATTTCTTCCTGCCATGAAAAATCAAGCTTGATCTCTGCAACTTCTGTACCTCTGGGTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAAATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAGTTGTCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15169#0 ATCTCTGCCGCCCCGGTTTCCCATCTCCGCCCGCAGTAAACCCCTCCTCATTCCCACCAC 60 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 CACCTCTCCTCGGAGGAATCTTTGCTGCTTTCCTTTATATAAACCCCTCTCCAGTCTATA 120 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 CTTCCACTCCACACTCCCCTCCACCCCCCCCCCCACACCCGCAGCAGCAGGGAGAAGACG 180 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 ACGACGAAGATGATGGATCTCGCCGACCCAAACCACCGGCTCATCGCCGGCGCGGCGCTG 240 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 CTGGTGGCCACCCTCGCCTTCATCAAGCTGCTGCTGAGCTCCGCCGGCGGCGGCAAGAAG 300 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 CGCCTCCCGCCGACCATCCCGGCGGCGCCGCTGGTGGGCGGGCTGCTCCGCTTCATGCGG 360 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 GGGCCGATCCCGATGATCCGGGAGGAGTACGCCCGCCTCGGCAGCGTCTTCACCGTCCCC 420 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 ATCCTCAGCCGCAAGATCACCTTCCTCATCGGCCCCGAGGTGTCGGCGCACTTCTTCAAG 480 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 GGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGC 540 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 CCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACC 600 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 GAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAG 660 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 GAGTACTTCTCTAAGTGGGGAGAAAGTGGAACGGTGGATCTGAAGTATGAGCTGGAGCAT 720 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 CTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGAGGGAGGTGCGAGAAAAGCTCTTT 780 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 GATGATGTTTCTTCTCTCTTCCATGATCTGGACAATGGGATGCAGCCAGTCAGTGTCATC 840 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 TTCCCCTACCTCCCAATTCCTGCACACCGCCGCCGTGACCGGGCACGGCAACGGTTGAAG 900 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 GAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACGGGCTGAGGAAGACATG 960 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 CTGCAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATA 1020 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 ACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACC 1080 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 TGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAG 1140 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 AAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGAT 1200 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 GTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCACCGCTAATCATGCTGCTC 1260 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 CGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCG 1320 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 AAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAG 1380 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 AACCCCGACTCATACGACCCCGACCGCTACGCACCAGGCAGGGAGGAGGACAAGGCAGCG 1440 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 GGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCACGGTTGCCTCGGTGAGCCCTTC 1500 consensus_15169#1 ------------------------------------------------------------ consensus_15169#0 GCCTACCTACAGATCAAGGCCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTG 1560 consensus_15169#1 --------------------------------CTCACTGCTGAGACTTGAGTC--AGCTG 26 * *** ** ****** ***** consensus_15169#0 GTCTCCCCCTTCCCGGAGACCAACTGGAAAGCCATGGTCGTCGGCATCAAGGACGAGGTG 1620 consensus_15169#1 CTCCCCTCCC-------GAGCAACTGAAG---CAT----GTCGCGCTCAAGG-CGAG--T 69 ** ** ** ** ****** * *** **** ****** **** consensus_15169#0 ATGGTCAACTTCAAGCGGCGGAAGCTCGTCGTCGACAACTAGGATGCCACCTTCAACCTT 1680 consensus_15169#1 GTGGTCAACT-CAAGCG--CGAAGC----CGCGCGCAACTAG-ATGC--ACCTCAACCTA 119 ********* ****** ***** ** ******* **** * ******* consensus_15169#0 AGGAGTCGATGCTTGTCGCGCTTTTCGCCTTTTTTCTCTTCTTTTCCCTTTCTGTCAGTA 1740 consensus_15169#1 GAG---CGAT-CTTGTCG--GCTTTCGCCTTTTT-CTCTTCTTTTCCCTTTCTGTCAGTA 172 * **** ******* ************ ************************* consensus_15169#0 TTTGATCCGTGTAAGTTTCTGCCAGCTTTGTATTAGGGTGTTTCAGTCGTTTTAGGATCC 1800 consensus_15169#1 TTTGATCCGTGTAAGTTTCTGCCAGCTTTGTATTAGGGTGTTTCAGTCGTTTTAGGATCC 232 ************************************************************ consensus_15169#0 TGTGATTTGCTTCCTGCCATGAAAAATCAAGCTTGATCTCTGCAACTTCTGTACCTCTGG 1860 consensus_15169#1 TGTGATTT-CTTCCTGCCATGAAAAATCAAGCTTGATCTCTGCAACTTCTGTACCTCTGG 291 ******** *************************************************** consensus_15169#0 GTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTG 1920 consensus_15169#1 GT-GCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTG 350 ** ********************************************************* consensus_15169#0 AATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAA 1980 consensus_15169#1 AATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAA 410 ************************************************************ consensus_15169#0 ATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAGTTGTNT 2040 consensus_15169#1 ATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAGTTGTCT 470 ********************************************************** * consensus_15169#0 CAAAAAAAAAAAAAAAAAAAAAA 2063 consensus_15169#1 ----------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||