These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15183#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 2582 fasta sequence [CCCCTCTAAACCCAGAACCCCAACCCTAGCCGCCTCCCCACCCGCCGCCGCCGCCGCTCGCCGCCGGATCGTCTCGATGGCCTCCTCGACGACGACGTCGGAGGACGCGCTGCGCCGGGCGCTGGCGGAGAGGCAGGCGGCCGTGGACGCGCAGGCGGAGGCGGTGCGGGCGCTCAAGGCGGCGGGGGCAGCTGCGGCCAAGGCCGAGGTGGATGCCGCGGTCGAGGCGCTCAAGGCGCTCAAGGTGGAGGCCGGCGCCGCCGCGCGGAGGCTGCAGGCGGCCGTCGGGGCTTCCGGCGGCGGAGGCGGGGCCGCGCGGGAGGAGATGCGGCAGGCGGTGGTGAACACGCTGGAGAGGAAGCTGTTCTACATCCCTTCCTTCAAGATCTACCGCGGCGTCGCCGGGCTGTACGACTACGGCCCGCCGGGATGCGCCGTCAAGGCCAACGTGCTCGCCTTCTGGAGGCAGCACTTCGTTTTGGAGGAGAACATGTTGGAGGTTGACTGCCCCTGTGTGACGCCTGAGGTTGTGTTGAAGGCATCGGGGCATGTCGAGAAGTTTACTGACCTCATGGTTAAGGATGAGAAGACAGGCACATGCTACCGTGCTGACCACCTGTTGAAAGATCACTGCAAGGAGAAGCTTGAGAAGGATCTCACCTTGTCCCCGGAGAAGGCAGCTGAATTGAAGCATGTTCTTGCTGTCCTGGATGACCTTTCAGCAGATGAACTTGGCGCAAAGATTAAGGAATAT-GGGATTGTTGCCCCTGATACTAAGAACCCGCTCTCTGATCCCTACCCGTTCAATCTTATGTTCCAGACATCCATCGGCCCTACCGGTCTTAATGTTGGGTATATGAGACCAGAAACAGCACAGGGTATTTTTGTCAACTTCAAGGACTTGTACTATTACAACGGGCAAAAGCTCCCTTTCGCAGCAGCTCAAATCGGGCAAGCATTCCGTAATGAGATTTCTCCACGACAAGGTCTTCTACGTGTGCGTGAATTCACATTAGCCGAGATTGAGCACTTTGTGGATCCTGAGGATAAATCTCACCCAAAATTTGTTGATGTTGCTGATTTGGAGTTTTTGATGTTTCCAAGAGAGCTGCAACTTTCAGGGGAGTCAGCCAAGTTAGTGAAGCTTGGGGAAGCAGTTTCAAAGGGAACTGTTAATAATGAGACACTTGGTTACTTCATTGGGAGGGTCTATCTTTTCCTAACACGTTTGGGTATTGATAAAAACCGGCTACGCTTCAGGCAGCATCTACCTAATGAGATGGCCCATTATGCTGCTGACTGTTGGGATGCAGAGATTGAGTGCTCTTACGGATGGATAGAATGTGTGGGCATTGCTGACAGATCTGCGTATGATTTGCGAGCTCATTCTGACAAAAGTGGTGTTCCACTTGTTGCTCATGAAAAATTCTCAAAGCCTAGAGAGGTTGAGAAACTTGTTATAGTGCCCTCAAAGAAAGACCTGGGGCTTGCTTTTAAGGGGAACCAAAAGATGGTGGTTGAAGCATTGGAGGCTATGAGT-GAG-AAAGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAG-AAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACC-TAGCAAATCAGAAGAGGAACAACTGAATGTCTTCC-GGTTCCCTCCT-ATTGTT-GCTCC--TATCAAATGCACTG-TGTT---CCCCCT-GGTGAAGAATCAGGAGTTTGA-CGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG-CCATTTCTATTGGG-AGGAGGTATGCAAGGACAGAT-GAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT-GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATT-CGTCCTGTTAACTTGTAA-GGTCGCACCAAGAATTGTTCACCT-ACCTTCAAAGTTCC-AACAAACGAGCTGAAGCTTTGAGTTATTACTTTTCTTAGACTCTTAAAAAAAATACTCAGATTGTCTTGTCTCTAGTATTGCTTAAGGATTAAGGTGAATCTTTTGACTGCCTAAAAAAAA] [+] EMBL AK119836 [CCCCTCTAAACCCAGAACCCCAACCCTAGCCGCCTCCCCACCCGCCGCCGCCGCCGCTCGCCGCCGGATCGTCTCGATGGCCTCCTCGACGACGACGTCGGAGGACGCGCTGCGCCGGGCGCTGGCGGAGAGGCAGGCGGCCGTGGACGCGCAGGCGGAGGCGGTGCGGGCGCTCAAGGCGGCGGGGGCAGCTGCGGCCAAGGCCGAGGTGGATGCCGCGGTCGAGGCGCTCAAGGCGCTCAAGGTGGAGGCCGGCGCCGCCGCGCGGAGGCTGCAGGCGGCCGTCGGGGCTTCCGGCGGCGGAGGCGGGGCCGCGCGGGAGGAGATGCGGCAGGCGGTGGTGAACACGCTGGAGAGGAAGCTGTTCTACATCCCTTCCTTCAAGATCTACCGCGGCGTCGCCGGGCTGTACGACTACGGCCCGCCGGGATGCGCCGTCAAGGCCAACGTGCTCGCCTTCTGGAGGCAGCACTTCGTTTTGGAGGAGAACATGTTGGAGGTTGACTGCCCCTGTGTGACGCCTGAGGTTGTGTTGAAGGCATCGGGGCATGTCGAGAAGTTTACTGACCTCATGGTTAAGGATGAGAAGACAGGCACATGCTACCGTGCTGACCACCTGTTGAAAGATCACTGCAAGGAGAAGCTTGAGAAGGATCTCACCTTGTCCCCGGAGAAGGCAGCTGAATTGAAGCATGTTCTTGCTGTCCTGGATGACCTTTCAGCAGATGAACTTGGCGCAAAGATTAAGGAATAT GGGATTGTTGCCCCTGATACTAAGAACCCGCTCTCTGATCCCTACCCGTTCAATCTTATGTTCCAGACATCCATCGGCCCTACCGGTCTTAATGTTGGGTATATGAGACCAGAAACAGCACAGGGTATTTTTGTCAACTTCAAGGACTTGTACTATTACAACGGGCAAAAGCTCCCTTTCGCAGCAGCTCAAATCGGGCAAGCATTCCGTAATGAGATTTCTCCACGACAAGGTCTTCTACGTGTGCGTGAATTCACATTAGCCGAGATTGAGCACTTTGTGGATCCTGAGGATAAATCTCACCCAAAATTTGTTGATGTTGCTGATTTGGAGTTTTTGATGTTTCCAAGAGAGCTGCAACTTTCAGGGGAGTCAGCCAAGTTAGTGAAGCTTGGGGAAGCAGTTTCAAAGGGAACTGTTAATAATGAGACACTTGGTTACTTCATTGGGAGGGTCTATCTTTTCCTAACACGTTTGGGTATTGATAAAAACCGGCTACGCTTCAGGCAGCATCTACCTAATGAGATGGCCCATTATGCTGCTGACTGTTGGGATGCAGAGATTGAGTGCTCTTACGGATGGATAGAATGTGTGGGCATTGCTGACAGATCTGCGTATGATTTGCGAGCTCATTCTGACAAAAGTGGTGTTCCACTTGTTGCTCATGAAAAATTCTCAAAGCCTAGAGAGGTTGAGAAACTTGTTATAGTGCCCTCAAAGAAAGACCTGGGGCTTGCTTTTAAGGGGAACCAAAAGATGGTGGTTGAAGCATTGGAGGCTATGAGT GAG AAGGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAG AAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACC TAGCAAATCAGAAGAGCAACAACTGAATGTCTTCC GGTTCCCTCCT ATTGTT GCTCC TATCAAATGCACTG TGTT CCCCCT GGTGAAGAATCAGGAGTTTGA CGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG CCATTTCTATTGGG AGGAGGTATGCAAGGACAGAT GAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATT CGTCCTGTTAACTTGTAA GGTCGCACCAAGAATTGTTCACCT ACCTTCAAAGTTCC AACAAACGAGCTGAA ] [+] EMBL CB631200 [ CGCGCGGACGCTGCAGGCGGCCGTCGGGGCTTCCGGCGGCGGAGGCGGGGCCGCGCGGGAGGAGATGCGGCAGGCGGTGGTGAACACGCTGGAGAGGAAGCTGTTCTACATCCCTTCCTTCAAGATCTACCGCGGCGTCGCCGGGCTGTACGACTACGGCCCGCCGGGATGCGCCGTCAAGGCCAACGTGCTCGCCTTCTGGAGGCAGCACTTCGTTTTGGAGGAGAACATGTTGGAGGTTGACTGCCCCTGTGTGACGCCTGAGGTTGTGTTGAAGGCATCGGGGCATGTCGAGAAGTTTACTGACCTCATGGTTAAGGATGAGAAGACAGGCACATGCTACCGTGCTGACCACCTGTTGAAAGATCACTGCAAGGAGAAGCTTGAGAAGGATCTCACCTTGTCCCCGGAGAAGGCAGCTGAATTGAAGCACGTTCTTGCTGTCCTGGATGACCTTTCAGCAGATGAACTTGGCGCAAAGATTAAGGAATAT GGGATTGTTGCCCCTGATACTAAGAACCCGCTCTCTGATCCCTACCCGTTCAATCTTATGTTCCAGACATCCATCGGCCCTACCGGTCTTAATGTTGGGTATATGAGACCAGAAACAGCACAGGGTATTTTTGTCAACTTCAAGGACTTGTACTATTACAACGGGCAAAAGCTCCCTTTCGCAGCAGCTCAAATCGGGCAAGCATTCCGTAATGAGATTTCTCCACGACAAGGTCTTCTACGTGTGCGTGAATTCACATTAGCCGAGATTGAGCACTTTGTGGATCCTGANGATAAATCTCACCCAAAATTTGTTGATGTTGCTGATTTGGAGTTTT ] [+] EMBL CF322614 [ CCGCGCGGGAGGAGATGCGGCAGGCGGTGGTGAACACGCTGGAGAGGAAGCTGTTCTACATCCCTTCCTTCAAGATCTACCGCGGCGTCGCCGGGCTGTACGACTACGGCCCGCCGGGATGCGCCGTCAAGGCCAACGTGCTCGCCTTCTGGAGGCAGCACTTCGTTTTGGAGGAGAACATGTTGGAGGTTGACTGCCCCTGTGTGACGCCTGAGGTTGTGTTGAAGGCATCGGGGCATGTCGAGAAGTTTACTGACCTCATGGTTAAGGATGAGAAGACAGGCACATGCTACCGTGCTGACCACCTGTTGAAAGATCACTGCAAGGAGAAGCTTGAGAAGGATCTCACCTTGTCCCCGGAGAAGGCAGCTGAATTGAAGCATGTTCTTGCTGTCCTGGATGACCTTTCAGCAGATGAACTTGGCGCAAAGATTAAGGAATATGGGGATTGTTGCCCCTGATACTAAGAACCCGCTCTCTGATCCCTACCCGTTCAATCTTATGTTCCAGACATCCATCGGCCCTACCGGTCTTAATGTTGGGTATATGAGACCAGAAACAGCACAGGGTATTT ] [+] EMBL AK068997 [ TGGAGTTTTTGATGTTTCCAAGAGAGCTGCAACTTTCAGGGGAGTCAGCCAAGTTAGTGAAGCTTGGGGAAGCAGTTTCAAAGGGAACTGTTAATAATGAGACACTTGGTTACTTCATTGGGAGGGTCTATCTTTTCCTAACACGTTTGGGTATTGATAAAAACCGGCTACGCTTCAGGCAGCATCTACCTAATGAGATGGCCCATTATGCTGCTGACTGTTGGGATGCAGAGATTGAGTGCTCTTACGGATGGATAGAATGTGTGGGCATTGCTGACAGATCTGCGTATGATTTGCGAGCTCATTCTGACAAAAGTGGTGTTCCACTTGTTGCTCATGAAAAATTCTCAAAGCCTAGAGAGGTTGAGAAACTTGTTATAGTGCCCTCAAAGAAAGACCTGGGGCTTGCTTTTAAGGGGAACCAAAAGATGGTGGTTGAAGCATTGGAGGCTATGAGT GAG AAAGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAG AAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACC TAGCAAATCAGAAGAGGAACAACTGAATGTCTTCC GGTTCCCTCCT ATTGTT GCTCC TATCAAATGCACTG TGTT CCCCCT GGTGAAGAATCAGGAGTTTGA CGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG CCATTTCTATTGGG AGGAGGTATGCAAGGACAGAT GAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGA ] [+] EMBL AU056541 [ CTTTCAGGGGAGTCAGCCAAGTTAGTGAAGCTTGGGGAAGCAGTTTCAAAGGGAACTGTTAATAATGAGACACTTGGTTACTTCATTGGGAGGGTCTATCTTTTCCTAACACGTTTGGGTATTGATAAAAACCGGCTACGCTTCAGGCAGCATCTACCTAATGAGATGGCCCATTATGCTGCTGACTGTTGGGATGCAGAGATTGAGTGCTCTTACGGATGGATAGAATGTGTGGGCATTGCTGACAGATCTGCGTATGATTTGCGAGCTCATTCTGACAAAAGTGGTGTTCCACTTGTTGCTCATGAAAAATTCTCAAAGCCTAGAGAGGTTGAGAAACTTGTTATAGTGCCCTCAAAGAAAGACCTGGGGCTTGCTTTTAAGGGGAACCAAAAGATGGTGGTTGAAGCATTGGAGGCTATGAGTGGAG AAAGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAG AAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACC TAGCAAATCAGAAGAGGAACAACTGAAT ] [+] EMBL AF074380 [ GCTTTTAAGGGGAACCAAAAGATGGTGGTTGAAGCATTGGAGGCTATGAGT GAG AAAGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAGAAAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACCTTAGCAAATCAGAAGAAGAACAACTGAATGTCTTCCGGGTTCCCTCCTAATTGTTGGCNCCCTTATCAAATGCACTGTTGTTTCCCCCCCTGGGTGAAAAAatcctggaa ] [+] EMBL CA998859 [ TTTAAGGGGAACCAAAAGATGGTGGTTGAAGCATTGGAGGCTATGAGT GAG AAAGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAG AAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACC TAGCAAATCAGAAGAGGAACAACTGAATGTCTTCC GGTTCCCTCCT ATTGTT GCTCC TATCAAATGCACTG TGTT CCCCCT GGTGAAGAATCAGGAGTTTGA CGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG CCATTTCTATTGGG AGGAGGTATGCAAGGACAGAT GAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCG ] [+] EMBL CF305615 [ GAACCAAAAGATGGTGGTTGAAGCATTGGAGGCTATGAGT GAG AAAGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAG AAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACC TAGCAAATCAGAAGAGGAACAACTGAATGTCTTCC GGTTCCCTCCT ATTGTT GCTCC TATCAAATGCACTG TGTT CCCCCT GGTGAAGAATCAGGAGTTTGA CGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG C ] [+] EMBL CF310977 [ GAAGCATTGGAGGCTATGAGT GAG AAAGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAG AAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACTCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACC TAGCAAATCAGAAGAGGAACAACTGAATGTCTTCC GGTTCCCTCCT ATTGTT GCTCC TATCAAATGCACTG TGTT CCCCCT GGTGAAGAATCAGGAGTTTGA CGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG CCATTTCTATTGGGAAGGAGGTATGCA ] [+] EMBL OSC26441 [ taTANGA T GAGCAAAGAAGCAATGGACATGAAATCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAG AAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACC TAGCAAATCAGAAGAGGAACAACTGAATGTCTTCC GGTTCCCTCCT ATTGTN GCTCC TATCAAATGCACTG TGTT CCCCCT GGTGAAGAATCAGGAGTTTGA CGNCGCTGCGAAAGTTATTGATAAAGCATTAACAA ] [-] EMBL CB631201 [ TCCTTCTACACAAGACC TAGCAAATCAGAAGAGGAACAACTGAATGTCTTCC GGTTCCCTCCT ATTGTT GCTCC TATCAAATGCACTG TGTT CCCCCT GGTGAAGAATCAGGAGTTTGA CGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG CCATTTCTATTGGG AGGAGGTATGCAAGGACAGAT GAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAGATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACACTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATT CGTCCTGTTAACTTGTAA GGTCGCACCAAGAATTGTTCACCT ACCTTCAAAGTTCC AACAAACGGGCTGAAGCTTTGAGTTATTACTTTTCTTAGACTC ] [+] EMBL AU056542 [ c CCCCCT GNTGAAG ATCAGGAGTTTGACCGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTGCCCATTTCTATTGGG AGGAGGTATGCAAGGACAGATGGAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATT CGTCCTGTTAACTTGTAA GGTCGCACCAAGAATTGTTCACCT ACCTTCAAAGTTCC AACAAACGAGCTGAAGCTTTGAGTTAaaaaaa ] [-] EMBL CF310976 [ GA CGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG CCATTTCTATTGGG AGGAGGTATGCAAGGACAGAT GAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATT CGTCCTGTTAACTTGTAA GGTCGCACCAAGAACTGTTCACCT ACCTTCAAAGTTCC AACAAACGAGCTGAAGCTTTGAGTTATTACTTTTCTTAGACTCTTAAAAAAAA ] [+] EMBL AA750507 [ TTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG CCATTTCTATTGGG AGGAGGTATGCAAGGACAGAT GAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGC ] [+] EMBL BE607470 [ GGAGGNNTGCAAGGACAGAT GAGATCGGTGTNCCATTCGCGGNAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATT CGTCCTGTTAACTTGTAA GGTCGCACCAAGAATTGTTCACCT ACCTTCAAAGTTCC AACAAACGAGCTGAAGCTTTGA ] [+] EMBL BE040273 [ GAGGTATGCAAGGACAGAT GAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTTGGCT TCTTTCAAAAGTTTTACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATTCCGTCC GTTAACTTGTAAGGGGCG ACCAAG ATTG TCACCTAACCTT ] [+] EMBL C72367 [ GGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATT CGTCCTGTTAACTTGTAAGGGTCGCACCAAGAATTGTTCACCT ANCTTtca ] [+] EMBL AU093977 [ GGCAAAGCACCTGGGCCGATGTTNCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATT CGTCCTGTTAACTTGTAA GGTCGCACCAAGAATTGTTCACCT ACCTTCAAAGTTCC AACAAACGAGCTGAAGCTTTGAGTTATTACTTTTCTTAaaaaa ] [+] EMBL BI811953 [ ACAGAACATAGCATTTGATTTTCTGCTGAATT CGTCCTGTTAACTTGTAA GGTCGCACCAAGAATTGTTCACCT ACCTTCAAAGTTCCAAACAAACGAGCTGAAGCTTTGAGTTATTACTTTTCTTAGACTCTTAGTTGTTGTACTCAGATTGTCTTGTCTCTAGTATTGCTTAAGGATTAAGGTGAATCTTTTGACTGCCTAAAAAAAA] consensusID : consensus_15183#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 479 fasta sequence [AGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCATTGGTGAAACAGCTGACAGATGGGCAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCACAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCTAAGATAGCACCCCAATGGCCGTTGATTGACCTTGAGGAGAAATAGTTGCTTGCCTCGTTTCCATGGCATGCTGGGCAAGAACAAGTGTTGTGCATGACACAATATACAACTGCTTGGACGCCCTTGACATGCTGCTGCCATTGTTGCTTTNTTGCTCTGCTTTGCAAAAGTTTGCACCTGGATGTTACATGTTGCACATACAGAACATAGCATTTGATTTTCTGCTGAATTCGTCCTGTTAACTTGTAAGGTCGCACCAAGAATTGTTCACCTACCTTCAAGTTCCACAACGAGCTGAAGCTTTGAGTTATTAAAAAA] [+] EMBL BI806659 [AGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCATTGGTGAAACAGCTGACAGATGGGCAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCACAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCTAAGATAGCACCCCAATGGCCGTTGATTGACCTTGAGGAGAAATAGTTGCTTGCCTCGTTTCCATGGCATGCTGGGCAAGAACAAGTGTTGTGCATGACACAATATACAACTGCTTGGACGCCCTTGACATGCTGCTGCCATTGTTGCTTTNTTGCTCTGCTTTGCAAAAGTTTGCACCTGGATGTTACATGTTGCACATACAGAACATAGCATTTGATTTTCTGCTGAATTCGTCCTGTTAACTTGTAAGGTCGCACCAAGAATTGTTCACCTACCTTCAAGTTCCACAACGAGCTGAAGCTTTGAGTTATTAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15183#0 CCCCTCTAAACCCAGAACCCCAACCCTAGCCGCCTCCCCACCCGCCGCCGCCGCCGCTCG 60 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 CCGCCGGATCGTCTCGATGGCCTCCTCGACGACGACGTCGGAGGACGCGCTGCGCCGGGC 120 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 GCTGGCGGAGAGGCAGGCGGCCGTGGACGCGCAGGCGGAGGCGGTGCGGGCGCTCAAGGC 180 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 GGCGGGGGCAGCTGCGGCCAAGGCCGAGGTGGATGCCGCGGTCGAGGCGCTCAAGGCGCT 240 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 CAAGGTGGAGGCCGGCGCCGCCGCGCGGAGGCTGCAGGCGGCCGTCGGGGCTTCCGGCGG 300 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 CGGAGGCGGGGCCGCGCGGGAGGAGATGCGGCAGGCGGTGGTGAACACGCTGGAGAGGAA 360 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 GCTGTTCTACATCCCTTCCTTCAAGATCTACCGCGGCGTCGCCGGGCTGTACGACTACGG 420 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 CCCGCCGGGATGCGCCGTCAAGGCCAACGTGCTCGCCTTCTGGAGGCAGCACTTCGTTTT 480 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 GGAGGAGAACATGTTGGAGGTTGACTGCCCCTGTGTGACGCCTGAGGTTGTGTTGAAGGC 540 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 ATCGGGGCATGTCGAGAAGTTTACTGACCTCATGGTTAAGGATGAGAAGACAGGCACATG 600 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 CTACCGTGCTGACCACCTGTTGAAAGATCACTGCAAGGAGAAGCTTGAGAAGGATCTCAC 660 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 CTTGTCCCCGGAGAAGGCAGCTGAATTGAAGCATGTTCTTGCTGTCCTGGATGACCTTTC 720 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 AGCAGATGAACTTGGCGCAAAGATTAAGGAATATGGGATTGTTGCCCCTGATACTAAGAA 780 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 CCCGCTCTCTGATCCCTACCCGTTCAATCTTATGTTCCAGACATCCATCGGCCCTACCGG 840 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 TCTTAATGTTGGGTATATGAGACCAGAAACAGCACAGGGTATTTTTGTCAACTTCAAGGA 900 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 CTTGTACTATTACAACGGGCAAAAGCTCCCTTTCGCAGCAGCTCAAATCGGGCAAGCATT 960 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 CCGTAATGAGATTTCTCCACGACAAGGTCTTCTACGTGTGCGTGAATTCACATTAGCCGA 1020 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 GATTGAGCACTTTGTGGATCCTGAGGATAAATCTCACCCAAAATTTGTTGATGTTGCTGA 1080 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 TTTGGAGTTTTTGATGTTTCCAAGAGAGCTGCAACTTTCAGGGGAGTCAGCCAAGTTAGT 1140 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 GAAGCTTGGGGAAGCAGTTTCAAAGGGAACTGTTAATAATGAGACACTTGGTTACTTCAT 1200 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 TGGGAGGGTCTATCTTTTCCTAACACGTTTGGGTATTGATAAAAACCGGCTACGCTTCAG 1260 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 GCAGCATCTACCTAATGAGATGGCCCATTATGCTGCTGACTGTTGGGATGCAGAGATTGA 1320 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 GTGCTCTTACGGATGGATAGAATGTGTGGGCATTGCTGACAGATCTGCGTATGATTTGCG 1380 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 AGCTCATTCTGACAAAAGTGGTGTTCCACTTGTTGCTCATGAAAAATTCTCAAAGCCTAG 1440 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 AGAGGTTGAGAAACTTGTTATAGTGCCCTCAAAGAAAGACCTGGGGCTTGCTTTTAAGGG 1500 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 GAACCAAAAGATGGTGGTTGAAGCATTGGAGGCTATGAGTGAGAAAGAAGCAATGGACAT 1560 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 GAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGA 1620 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 TGTGGTAATAACCAAGAAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACG 1680 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 AGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCT 1740 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 ATTTGAGCATTCCTTCTACACAAGACCTAGCAAATCAGAAGAGGAACAACTGAATGTCTT 1800 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 CCGGTTCCCTCCTATTGTTGCTCCTATCAAATGCACTGTGTTCCCCCTGGTGAAGAATCA 1860 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 GGAGTTTGACGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCA 1920 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 TATTATTGACACTACTGCCATTTCTATTGGGAGGAGGTATGCAAGGACAGATGAGATCGG 1980 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 TGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAG 2040 consensus_15183#1 ----------------------------------------------------AGGGACAG 8 ******** consensus_15183#0 CAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGA 2100 consensus_15183#1 CAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCATTGGTGAAACAGCTGACAGA 68 **************************************** ******************* consensus_15183#0 TGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCC-CAGG 2159 consensus_15183#1 TGGGCAA-GCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCACAGG 127 ******* *********************************************** **** consensus_15183#0 GTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGA-AGCACCCCAAATGGCCGTTGA 2218 consensus_15183#1 GTGATCAGGAGTGAAAATCCTGAACCCTGTTCCTAAGATAGCACCCCAA-TGGCCGTTGA 186 ********************************* **** ********** ********** consensus_15183#0 TTGAC-TTGAGGAGAAATAGTTCTT--CCTCGTTTC-ATGCAATCT--GGCAAGAACAAA 2272 consensus_15183#1 TTGACCTTGAGGAGAAATAGTTGCTTGCCTCGTTTCCATGGCATGCTGGGCAAGAACAAG 246 ***** **************** * ********* *** ** *********** consensus_15183#0 GTTTGT-CATACACAAATATACAACT-CTTGGACGCCCTT-ACATCTCTC---CATTGTT 2326 consensus_15183#1 TGTTGTGCATGACACAATATACAACTGCTTGGACGCCCTTGACATGCTGCTGCCATTGTT 306 **** *** *********** ************* **** * ******* consensus_15183#0 --CTTTTTGCTCTCTTT--CAAAAGTTT-CACCTGATT--TACATGTTCACAATACAGAA 2379 consensus_15183#1 GCTTTNTTGCTCTGCTTTGCAAAAGTTTGCACCTGGATGTTACATGTTGCACATACAGAA 366 ** ******* ** ********* ****** * ******** ******** consensus_15183#0 CATAGCATTTGATTTTCTGCTGAATTCGTCCTGTTAACTTGTAAGGTCGCACCAAGAATT 2439 consensus_15183#1 CATAGCATTTGATTTTCTGCTGAATTCGTCCTGTTAACTTGTAAGGTCGCACCAAGAATT 426 ************************************************************ consensus_15183#0 GTTCACCTACCTTCAAAGTTCCAACAAACGAGCTGAAGCTTTGAGTTATTACTTTTCTTA 2499 consensus_15183#1 GTTCACCTACCTTCAA-GTTCCAC--AACGAGCTGAAGCTTTGAGTTATTAAAAAA---- 479 **************** ****** ************************* consensus_15183#0 GACTCTTAAAAAAAATACTCAGATTGTCTTGTCTCTAGTATTGCTTAAGGATTAAGGTGA 2559 consensus_15183#1 ------------------------------------------------------------ consensus_15183#0 ATCTTTTGACTGCCTAAAAAAAA 2582 consensus_15183#1 ----------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||