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Oryza sativa
cluster # 15187 cluster # 15187       Sequences # 20       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15187#0 length = 1619 sequences # 15  
consensus_15187#1 length = 1197 sequences # 2  
consensus_15187#2 length = 852 sequences # 1  
consensus_15187#3 length = 525 sequences # 1  
consensus_15187#4 length = 321 sequences # 1  

consensusID : consensus_15187#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1619
fasta sequence
                              [AATATCTGCCATCTTTGTTCCTGTTCTATGTGGTTCGGCCTTTAAAAACAAGGGTGTCCAACCACTGCTTGATGCTGTTGTTGATTACTTGCCATCACCACTTGACCTACCACCAATGAAGGGCACTGATCCAGAGGACCCTGAACTGATCCTTGAAAGAAAGCCTAGTGATGATGAGCCATTTTCTGGGTTAGCTTTCAAGATCATGACTGACCCATTTGTGGGATCATTGACATTTGTTCGCATATACTCTGGGAAGCTGGTTGCTGGTTCATATGTTCTCAATGCAAACAAAGATAAGAAGGAAAGAATCGGAAGGCTTCTAGAGATGCATGCGAACAGTAAGGAAGATATAACAGTTGCTGTGGCAGGTGACATAGTAGCTCTTGCTGGTCTCAAAGATACAATTACTGGTGAAACTCTTAGTGACCCAGATAAGCCTGTTGTGCTTGAACGCATGGAATTTCCTGATCCTGTCATTAAAGTTGCTATTGAACCAAAGACCAAAGCTGATGCTGACAAAATGGCAACCGGACTAATCAAGCTTGCTCAAGAAGACCCATCATTCCACTTCTCTAGAGATGAGGAGACCAACCAGACTGTTATTGAAGGAATGGGAGAATTGCACCTTGACATCATTGTTGACAGATTAAAGAGAGAATTCAGGGTTGAAGCAAATGTTGGAGCTCCGCAAGTCAACTACCGTGAAAGTATTTCCAAGATTTCAGAAGTACAATACGTTCACAAGAAACAGTCTGGTGGATCTGGGCAATTTGCGGACATTATTGTGCGATTCGAGCCTTTGGAGGCTGGAAGTGGGTATGAATTCAAGAGTGAAATAAAGGGAGGGGCAGTTCCAAAAGAATATGTACCAGGCGTGATGAAGGGAATTGAGGAAAGCTTGCCCAATGGTGTCCTTGCTGGTTACCCTGTTGTGGACCTCCGAGCGGTGCTGGTTGATGGCTCATACCATGATGTTGATTCAAGTGTCCTGGCATTCCAAATTGCAGCCAGAGGTGCATTCCGTGAAGGATTGAGGAAGGCTGGTCCAAGACTCCTGGAACCTATAATGAAAGTTGAGG-TGATAA-CCCCTGAGGAGCATTTGGGTGATGTTATTGGTGATTTGAACTCCAGAAGAGGACA-GGTCAATAGCTTCGGGGATAAACCTGGTGGCCTGAAGGTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCA-AGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCACAGCACATCCAGAACGAGCTCTCTGCGGCGAAACAGGAGGAAGCTAGTACTGCTTAA-TTTTTTTTCCAGATTTTGGTAGATATACTAAACGGCGACACC-GGAGCA-GGTGGATAATAGGACATCCAAGTGTATGTAGC-TTTGTAGCGTCAAGCCCCTCGGGGAGATATTGTTTGCCATTGTTTTGGACCTGATAATGGCCTTGTCAAGTTCTTTTCTTCTTTTTGAAGACTGCCTTGTTAAGGTTTTCAGAAGAGAAAGCGGTACCTATAAAATTTTTGTTTCCTTGCTCTAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAC]

[+] EMBL CB622857             [AATATCTGCCATCTTTGTTCCTGTTCTATGTGGTTCGGCCTTTAAAAACAAGGGTGTCCAACCACTGCTTGATGCTGTTGTTGATTACTTGCCATCACCACTTGACCTACCACCAATGAAGGGCACTGATCCAGAGGACCCTGAACTGATCCTTGAAAGAAAGCCTAGTGATGATGAGCCATTTTCTGGGTTAGCTTTCAAGATCATGACTGACCCATTTGTGGGATCATTGACATTTGTTCGCATATACTCTGGGAAGCTGGTTGCTGGTTCATATGTTCTCAATGCAAACAAAGATAAGAAGGAAAGAATCGGAAGGCTTCTAGAGATGCATGCGAACAGTAAGGAAGATATAACAGTTGCTGTGGCAGGTGACATAGTAGCTCTTGCTGGTCTCAAAGATACAATTACTGGTGAAACTCTTAGTGACCCAGATAAGCCTGTTGTGCTTGAACGCATGGAATTTCCTGATCCTGTCATTAAAGTTGCTATTGAACCAAAGACCAAAGCTGATGCTGACAAAATGGCAACCGGACTAATCAAGCTTGCTCAAGAAGACCCATCATTCCACTTCTCTAGAGATGAGGAGACCAACCAGACTGTTATTGAAGGAATGGGAGAATTGCACCTTGACATCATTGTTGACAGATTAAAGAGAGAATTCAGGGTTGAAGCAAATGTTGGAGCTCCGCAAGTCAACTACCGTGAAAGTATTTCCAAGATTTCAGAAGTACAATACGTTCACAAGAAACAGTCTGGTGGATCTGGGCAATTTGCGGACATTATTGTGCGATTCGAGCCTTTGGAAGCTGGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK058778             [                                                                                                                                                                                                         GATCATGACTGACCCATTTGTGGGATCATTGACATTTGTTCGCATATACTCTGGGAAGCTGGTTGCTGGTTCATATGTTCTCAATGCAAACAAAGATAAGAAGGAAAGAATCGGAAGGCTTCTAGAGATGCATGCGAACAGTAAGGAAGATATAACAGTTGCTGTGGCAGGTGACATAGTAGCTCTTGCTGGTCTCAAAGATACAATTACTGGTGAAACTCTTAGTGACCCAGATAAGCCTGTTGTGCTTGAACGCATGGAATTTCCTGATCCTGTCATTAAAGTTGCTATTGAACCAAAGACCAAAGCTGATGCTGACAAAATGGCAACCGGACTAATCAAGCTTGCTCAAGAAGACCCATCATTCCACTTCTCTAGAGATGAGGAGACCAACCAGACTGTTATTGAAGGAATGGGAGAATTGCACCTTGACATCATTGTTGACAGATTAAAGAGAGAATTCAGGGTTGAAGCAAATGTTGGAGCTCCGCAAGTCAACTACCGTGAAAGTATTTCCAAGATTTCAGAAGTACAATACGTTCACAAGAAACAGTCTGGTGGATCTGGGCAATTTGCGGACATTATTGTGCGATTCGAGCCTTTGGAGGCTGGAAGTGGGTATGAATTCAAGAGTGAAATAAAGGGAGGGGCAGTTCCAAAAGAATATGTACCAGGCGTGATGAAGGGAATTGAGGAAAGCTTGCCCAATGGTGTCCTTGCTGGTTACCCTGTTGTGGACCTCCGAGCGGTGCTGGTTGATGGCTCATACCATGATGTTGATTCAAGTGTCCTGGCATTCCAAATTGCAGCCAGAGGTGCATTCCGTGAAGGATTGAGGAAGGCTGGTCCAAGACTCCTGGAACCTATAATGAAAGTTGAGG TGATAA CCCCTGAGGAGCATTTGGGTGATGTTATTGGTGATTTGAACTCCAGAAGAGGACA GGTCAATAGCTTCGGGGATAAACCTGGTGGCCTGAAGGTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCA AGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCACAGCACATCCAGAACGAGCTCTCTGCGGCGAAACAGGAGGAAGCTAGTACTGCTTAA TTTTTTTTCCAGATTTTGGTAGATATACTAAACGGCGACACC GGAGCA GGTGGATAATAGGACATCCAAGTGTATGTAGC TTTGTAGCGTCAAGCCCCTCGGGGAGATATTGTTTGCCATTGTTTTGGACCTGATAATGGCCTTGTCAAGTTCTTTTCTTCTTTTTGAAGACTGCCTTGTTAAGGTTTTCAGAAGAGAAAG                                                                ]
[+] EMBL BF430545             [                                                                                                                                                                                                                                                                                                                                                                                                                                       TAGTGACCCAGATAAGCCTGTTGTGCTTGAACGCATGGAATTTCCTGATCCTGTCATTAAAGTTGCTATTGAACCAAAGACCAAAGCTGATGCTGACAAAATGGCAACCGGACTAATCAAGCTTGCTCAAGAAGACCCATCATTCCACTTCTCTAGAGATGAGGAGACCAACCAGACTGTTATTGAAGGAATGGGAGAATTGCACCTTGACATCATTGTTGACAGATTAAAGAGAGAATTCAGGGTTGAAGCAAATGTTGGAGCTCCGCAAGTCAACTACCGTGAAAGTATTTCCAAGATTTCAGAAGTACAATACGTTCACAAGAAACAGTCTGGTGGATCTGGGCAATTTGCGGACATTATTGTGCGATTCGAGCCTTTGGAGGCTGGAAGTGGGTATGAATTCAAGAGTGAAATAAAGGGAGGGGCAGTTCCAAAAGAATATGTACCAGGCGTGATGAAGGGAATTGAGGAAAGCTTGCCCAATGGTGTCCTTGCTGGTTACCCTGTTGTGGACCTCCGAGCGGTGCTGGTTGATGGCTCATACCATGATGTTGATTCAAGTGTCCTGGCATTCCAAATTGCAGCCAGAGGTGCATTCCGTGAAGGATTGAGGAAGGCTGGTCCAAGACTCCTGGGACCTATAATGAAAGTTGAGG TGATAA CCCCTGAGGAGCATTTGGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA765441             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCAAATGTTGGAGCTCCGCAAGTCAACTACCGTGAAAGTATTTCCAAGATTTCAGAAGTACAATACGTTCACAAGAAACAGTCTGGTGGATCTGGGCAATTTGCGGACATTATTGTGCGATTCGAGCCTTTGGAGGCTGGAAGTGGGTATGAATTCAAGAGTGAAATAAAGGGAGGGGCAGTTCCAAAAGAATATGTACCAGGCGTGATGAAGGGAATTGAGGAAAGCTTGCCCAATGGTGTCCTTGCTGGTTACCCTGTTGTGGACCTCCGAGCGGTGCTGGTTGATGGCTCATACCATGATGTTGATTCAAGTGTCCTGGCATTCCAAATTGCAGCCAGAGGTGCATTCCGTGAAGGATTGAGGAAGGCTGGTCCAAGACTCCTGGAACCTATAATGAAAGTTGAGG TGATAA CCCCTGAGGAGCACTTGGGTGATGTTATTGGTGATTTGAACTCCAGAAGAGGACA GGTCAATAGCTTCGGGGATAAACCTGGTGGCCTGAAGGTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCA AGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCACAGCACATNCAGAACGAGCTCTCTGCGGCGAAACAGGANGAAGCTAGTACTGCTTAA TTTTTTTTNCAGANTTTGGTAGATATACTAAACGGCGACACCGGGACCA GGTGGATAATAGGACATNCCAGTGTNTGTAGC TTTGTAGCGNCAANNCCCTCGGGGAGATATTGGTTGNCATTGNTTTGGANCTGATAATGGNCCTGGCAAGNTC                                                                                                                ]
[-] EMBL CB622858             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GACATTATTGTGCGATTCGAGCCTTTGGAGGCTGGAAGTGGGTATGAATTCAAGAGTGAAATAAAGGGAGGGGCAGTTCCAAAAGAATATGTACCAGGCGTGATGAAGGGAATTGAGGAAAGCTTGCCCAATGGTGTCCTTGCTGGTTACCCTGTTGTGGACCTCCGAGCGGTGCTGGTTGATGGCTCATACCATGATGTTGATTCAAGTGTCCTGGCATTCCAAATTGCAGCCAGAGGTGCATTCCGTGAAGGATTGAGGAAGGCTGGTCCAAGACTCCTGGAACCTATAATGAAAGTTGAGG TGATAA CCCCTGAGGAGCATTTGGGTGATGTTATTGGTGATTTGAACTCCAGAAGAGGACA GGTCAATAGCTTCGGGGATAAACCTGGTGGCCTGAAGGTTGTAGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCA AGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCACAGCACATCCAGAACGAGCTCTCTGCGGCGAAACAGGAGGAAGCTAGTACTGCTTAA TTTTTTTTCCAGATTTTGGTAGATATACTAAACGGCGACACC GGAGCA GGTGGATAATAGGACATCCAAGTGTATGTAGC TTTGTAGCGTCAAGCCCCTCGGGGAGATATTGTTTGCCATTGTTTTGGACCTGATAATGGCCTCGTCAAGTTCTTTTCTTCTTTTTGAAGACTACGGTGTTAAGGTTTTCAGAAGAGAAAGCGGTAC                                                          ]
[-] EMBL CB681299             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGCTGGAAGTGGGTATGAATTCAAGAGTGAAATAAAGGGAGGGGCAGTTCCAAAAGAATATGTACCAGGCGTGATGAAGGGAATTGAGGAAAGCTTGCCCAATGGTGTCCTTGCTGGTTACCCTGTTGTGGACCTCCGAGCGGTGCTGGTTGATGGCTCATACCATGATGTTGATTCAAGTGTCCTGGCATTCCAAATTGCAGCCAGAGGTGCATTCCGTGAAGGATTGAGGAAGGCTGGTCCAAGACTCCTGGAACCTATAATGAAAGTTGAGG TGATAA CCCCTGAGGAGCATTTGGGTGATGTTATTGGTGATTTGAACTCCAGAAGAGGACA GGTCAATAGCTTCGGGGATAAACCTGGTGGCCTGAAGGTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCA AGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCACAGCACATCCAGAACGAGCTCTCTGCGGCGAAACAGGAGGAAGCTAGTACTGCTTAATTTTTTTTTCCAGATTTTGGTAGATATACTAAACGGCGACACC GGAGCA GGTGGATAATAGGACATCCAAGTGTATGTAGC TTTGTAGCGTCAAGCCCCTCGGGGAGATATTGTTTGCCATTGTTTTGGACCTGATAATGGCCTTGTCAAGTTCTTTTCTTCTTTTTGAAGACTGCCTTGTTAAGGTTTTCAGAAGAGAAAAGGGTACCTATAAAATTTTTGTTTCCTTGCTCTAAACTTAAAAGg                    ]
[-] EMBL CB658928             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAAGTGGGTATGAATTCAAGAGTGAAATAAAGGGAGGGGCAGTTCCAAAAGAATATGTACCAGGCGTGATGAAGGGAATTGAGGAAAGCTTGCCCAATGGTGTCCTTGCTGGTTACCCTGTTGTGGACCTCCGAGCGGTGCTGGTTGATGGCTCATACCATGATGTTGATTCAAGTGTCCTGGCATTCCAAATTGCAGCCAGAGGTGCATTCCGTGAAGGATTGAGGAAGGCTGGTCCAAGACTCCTGGAACCTATAATGAAAGTTGAGG TGATAA CCCCTGAGGAGCATTTGGGTGATGTTATTGGTGATTTGAACTCCAGAAGAGGACA GGTCAATAGCTTCGGGGATAAACCTGGTGGCCTGAAGGTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCA AGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCACAGCACATCCAGAACGAGCTCTCTGCGGCGAAACAGGAGGAAGCTAGTACTGCTTAA TTTTTTTTCCAGATTTTGGTAGATATACTAAACGGCGACACC GGAGCA GGTGGATAATAGGACATCCAAGTGTATGTAGC TTTGTAGCGTCAAGCCCCTCGGGGAGATATTGTTTGCCATTGTTTTGGACCTGATAATGGCCTTGTCAAGTTCTTTTCTTCTTTTTGAAGACTGCCTTGTTAAGGTTTTCAGAAGAGAAAGC                                                               ]
[+] EMBL CF325920             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGTGGACCTCCGAGCGGTGCTGGTTGATGGCTCATACCATGATGTTGATTCAAGTGTCCTGGCATTCCAAATTGCAGCCAGAGGTGCATTCCGTGAAGGATTGAGGAAGGCTGGTCCAAGACTCCTGGAACCTATAATGAAAGTTGAGG TGATAA CCCCTGAGGAGCATTTGGGTGATGTTATTGGTGATTTGAACTCCAGAAGAGGACA GGTCAATAGCTTCGGGGATAAACCTGGTGGCCTGAAGGTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCA AGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCACAGCACATCCAGAACGAGCTCTCTGCGGCGAAACAGGAGGAAGCTAGTACTGCTTAA TTTTTTTTCCAGATTTTGGTAGATATACTAAACGGC                                                                                                                                                                                                                                        ]
[+] EMBL BE230642             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGACCTCCGAGCGGTGCTGGTTGATGGCTCATACCATGATGTTGATTCAAGTGTCCTGGCATTCCAAATTGCAGCCAGAGGTGCATTCCGTGAAGGATTGAGGAAGGCTGGTCCAAGACTCCTGGAACCTATAATGAAAGTTGAGG TGATAA CCCCTGAGGAGCATTTGGGTGATGTTATTGGTGATTTGAACTCCAGAAGAGGACA GGTCAATAGCTTCGGGGATAAACCTGGTGGCCTGAAGGTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCA AGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCACAGCACATCCAGAACGAGCTCTCTGCGGCGAAACAGGAGGAAGCTAGTACTGCTTAA TTTTTTTTCCAGATTTTGGTAGATATACTAAACGGCGACACC GGAGCA GGTGGATAATAGGACATCCAAGTGTATGTAGCTTTTGTAG                                                                                                                                                                                  ]
[+] EMBL BE229986             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGACCTCCGAGCGGTGCTGGTTGATGGCTCATACCATGATGTTGATTCAAGTGTCCTGGCATTCCAAATTGCAGCCAGAGGTGCATTCCGTGAAGGATTGAGGAAGGCTGGTCCAAGACTCCTGGAACCTATAATGAAAGTTGAGG TGATAA CCCCTGAGGAGCATTTGGGTGATGTTATTGGTGATTTGAACTCCATAAGAGGACA GGTCAATAGCTTCGGGGATAAACCTGGTGGCCTGAAGGTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCA AGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCACAGCACATCCAGAACGAGCTCTCTGCGGCGAAAC                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM038904             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTGGAGGTTGATAACCCCCTGAGGACCATTTGGGTGATGTTATT GTGATTTGAACTCCCGAAGAGGACACGGTCCATAGCTTCGGGGATAAACCTGGT GCCTGAAGGTTGTCGATGCTTTCGT CCACTT CGGAGATGTTCCNGTACGTCAGCACGCTGAGAGGAATGACCANAGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCNCAGCACATCCAGAACGAGCTCTCTGCGGCGAAACCGGAGGAAGCTAGTACTGCTTAA TTTTTTTTCCAGATTTTGGTAGATATACTAAACGGCGACACC GGAGCACGGTGGATAATAGGACATCCAAGTGTATGTAGC TTTGTAGCGTCAAGCCCCTCGGGGAGATATTGTTTGCCCTTGTTTTGGACCTGATAATGGCCTTGTCAAGTTCTTTTCTTCTTTTTGAAGACTGCCTTGTTAAGGTTTTCAGAAGAGAAAGCGGTACCTATAAAATTTTTGTTTCCTTGCTCTAAAAAAAAAA                      ]
[+] EMBL AU172560             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTGGTGGCCTGAAGGTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCA AGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCACAGCACATCCAGAACGAGCTCTCTGCGGCGAAACAGGAGGAAGCTAGTACTGCTTAA TTTTTTTTCCAGATTTTGGTAGATATACTAAACGGCGACACC GGAGCA GGTGGATAATAGGACATCCAAGTGTATGTAGC TTTGTAGCGTCAAGCCCCTCGGGGAGATATTGTTTGCCATTGTTTTGGACCTGATAATGGCCTTGTCAAGTTCTTTTCTTCTTTTTGAAGACTGCCTTGTTAAGGTTTTCAGAAGAGAAAGCGGTACCTATAAAATTTTTGTTTCCTTGCTCTAAAAA                           ]
[-] EMBL CF325578             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGTTGAGAGGAATGACCA AGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCACAGCACATCCAGAACGAGCTCTTTGCGGCGAAACAGGAGGAAGCTAGTACTGCTTAA TTTTTTTTCCAGATTTTGGTAGATATAATAAACGGCGACACC GGAGCA GGTGGATAATAGGACATCCAAGTGTATGTAGC TTTGTAGCGTCAAGCCCCTCGGGGAGATATTGTTTGCCATTGTTTTGGACCTGATAATGGCCTTGTCAAGTTCTTTTTTTCTTTTTGAAGAATAAAAAAATAAGGTTTTCAGAAGAGAAAGCGGTACCTATAAAATTTTTGTTTCCTTGCTTTAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAC]
[-] EMBL CF324863             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCA AGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTTGACGTCGTCCCACAGCACATCCAGAACGAGCTCTTTGCGGCGAAACAGGAGGAAGCTAGTACTGCTTAA TTTTTTTTCCAGATTTTGGTAGATATACTAAACGGCGACACC GGAGCA GGTGGATAATAGGACATCCAAGTGTATGTAGC TTTGTAGCGTCAAGCCCCTCGGGGAGATATTGTTTGCCATTGTTTTGGACCTGATAATGGCCTTGTCAAGTTCTTTTTTTCTTTTTGAAGACTGCCTTGTTAAGGTTTTCAGAAGAGAAAGCGGTACCTATAAAATTTTTGTTTCCTTGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC]
[+] EMBL AW069998             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            gGCA GGTGGATAATAGGACATCCAAGTGTATGTAGC TTTGTAGCGTTTAGCCCCTCGGGGAGATATTGTTTGCCATTGTTTTGGACCTGATAATGGCCTTGTCAAGTTCTTTTCTTCTTTTTGAAGACTGCCTTGTTAAGGTTTTCAGAAGA                                                                     ]


>consensus_15187#0 AATATCTGCCATCTTTGTTCCTGTTCTATGTGGTTCGGCCTTTAAAAACAAGGGTGTCCA ACCACTGCTTGATGCTGTTGTTGATTACTTGCCATCACCACTTGACCTACCACCAATGAA GGGCACTGATCCAGAGGACCCTGAACTGATCCTTGAAAGAAAGCCTAGTGATGATGAGCC ATTTTCTGGGTTAGCTTTCAAGATCATGACTGACCCATTTGTGGGATCATTGACATTTGT TCGCATATACTCTGGGAAGCTGGTTGCTGGTTCATATGTTCTCAATGCAAACAAAGATAA GAAGGAAAGAATCGGAAGGCTTCTAGAGATGCATGCGAACAGTAAGGAAGATATAACAGT TGCTGTGGCAGGTGACATAGTAGCTCTTGCTGGTCTCAAAGATACAATTACTGGTGAAAC TCTTAGTGACCCAGATAAGCCTGTTGTGCTTGAACGCATGGAATTTCCTGATCCTGTCAT TAAAGTTGCTATTGAACCAAAGACCAAAGCTGATGCTGACAAAATGGCAACCGGACTAAT CAAGCTTGCTCAAGAAGACCCATCATTCCACTTCTCTAGAGATGAGGAGACCAACCAGAC TGTTATTGAAGGAATGGGAGAATTGCACCTTGACATCATTGTTGACAGATTAAAGAGAGA ATTCAGGGTTGAAGCAAATGTTGGAGCTCCGCAAGTCAACTACCGTGAAAGTATTTCCAA GATTTCAGAAGTACAATACGTTCACAAGAAACAGTCTGGTGGATCTGGGCAATTTGCGGA CATTATTGTGCGATTCGAGCCTTTGGAGGCTGGAAGTGGGTATGAATTCAAGAGTGAAAT AAAGGGAGGGGCAGTTCCAAAAGAATATGTACCAGGCGTGATGAAGGGAATTGAGGAAAG CTTGCCCAATGGTGTCCTTGCTGGTTACCCTGTTGTGGACCTCCGAGCGGTGCTGGTTGA TGGCTCATACCATGATGTTGATTCAAGTGTCCTGGCATTCCAAATTGCAGCCAGAGGTGC ATTCCGTGAAGGATTGAGGAAGGCTGGTCCAAGACTCCTGGAACCTATAATGAAAGTTGA GGTGATAACCCCTGAGGAGCATTTGGGTGATGTTATTGGTGATTTGAACTCCAGAAGAGG ACAGGTCAATAGCTTCGGGGATAAACCTGGTGGCCTGAAGGTTGTCGATGCTTTCGTGCC ACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCAAGGGGCGCGCGTC TTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCACAGCACATCCAGAACGAGCTCTC TGCGGCGAAACAGGAGGAAGCTAGTACTGCTTAATTTTTTTTCCAGATTTTGGTAGATAT ACTAAACGGCGACACCGGAGCAGGTGGATAATAGGACATCCAAGTGTATGTAGCTTTGTA GCGTCAAGCCCCTCGGGGAGATATTGTTTGCCATTGTTTTGGACCTGATAATGGCCTTGT CAAGTTCTTTTCTTCTTTTTGAAGACTGCCTTGTTAAGGTTTTCAGAAGAGAAAGCGGTA CCTATAAAATTTTTGTTTCCTTGCTCTAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAC



consensusID : consensus_15187#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1197
fasta sequence
                              [AAGGCGAGGGAACCTGAACCCGAGCCCGAGCCGATGGAGGTGACAGAGGAGGAGAAGGAGCGGAAGGAAAGGAAGGCCGCAGCGCAGGAGGAGAAAGAAGCGGGCAACGCCGCTTACAAGAAGGATTTTGAGACGGCGATCCAACACTACACAAAAGCCATGGAGCTCGACGATGAGGACGTCTCCTACCTCACCAACCGAGCCGCCGTTTACCTTGAGATGGGAAAGTATGATGAGTGCATCAACGACCGTGATAAGGCTGTTGAGAGGGGAAGGGAACTTCATGCTGATTTCAAGATCATCTCTAGGGCACTGACCAGAAAGGGAACTGCTCTTGCTAAGATTGCTAAGTGCTTCAAAGATTATGATGTTGCCATTGAGACTTACCAAAAGGCTCTGACTGAGCACAGAAACCCAGATACCCTGAAGAAACTGAATGATGCTGAAATAGCAAAGAAGGAGCTAGAGCAGCAAGAGTACTATGATCCAAAAATAGCTGATGAGGAGCGAGAGAAAGGTAATGAATTCTTCAAGCAGCAGAAATACCCAGAAGCAGTGAAGCATTACAGTGAAGCTCTCAGGAGAAACCCCAAGGATCCAAGGGTATACAGCAACAGGGCCGCCTGTTATACCAAGCTTGGAGCAATGCCTGAAGGTCTCAAAGATGCTGAAAAATGCATTGAACTAGATCCTACATTCTCCAAGGGATACACAAGGAAAGGTGCAATCCAATTTTTCATGAAAGAATATGACAAAGCACTGGAAACCTATCAGGCCGGCTTAAAGCATGACCCGAACAACCAGGAGTTGCTTGATGGTGTTAGGAGATGTGTCCAGCGGATCAACAAGGCTAGCAGAGGGGAACTGAGCCAGGAGGAATTGCAAGAAAGACAGAACAAGGCTATGCAGGACCCAGAAATCCAGAACATTCTGAAGGATCCTATCATGCAGCAGGTGTTGACCGACTTCCAGGAGAATCCGAAGGCTGCTCAGGCGCATCTCAAGAACCCCGGAGTGATGCAGAAGATCCAGAAGCTAGTAAGTGCAGGGATAGTCCAAATGAAGTAGACATGCTGAAAGGGCCAGGGATAGAGTAATCTGATCGGTGTGCCTGGAAACTTCTGAATGCAAAATTCGTCGTCGAATTTTTGTACAGTACAATCGTGTTTATGCAAATTCCGATTGGTCATGGCTGAG]

[+] EMBL AK108550             [AAGGCGAGGGAACCTGAACCCGAGCCCGAGCCGATGGAGGTGACAGAGGAGGAGAAGGAGCGGAAGGAAAGGAAGGCCGCAGCGCAGGAGGAGAAAGAAGCGGGCAACGCCGCTTACAAGAAGGATTTTGAGACGGCGATCCAACACTACACAAAAGCCATGGAGCTCGACGATGAGGACGTCTCCTACCTCACCAACCGAGCCGCCGTTTACCTTGAGATGGGAAAGTATGATGAGTGCATCAACGACCGTGATAAGGCTGTTGAGAGGGGAAGGGAACTTCATGCTGATTTCAAGATCATCTCTAGGGCACTGACCAGAAAGGGAACTGCTCTTGCTAAGATTGCTAAGTGCTTCAAAGATTATGATGTTGCCATTGAGACTTACCAAAAGGCTCTGACTGAGCACAGAAACCCAGATACCCTGAAGAAACTGAATGATGCTGAAATAGCAAAGAAGGAGCTAGAGCAGCAAGAGTACTATGATCCAAAAATAGCTGATGAGGAGCGAGAGAAAGGTAATGAATTCTTCAAGCAGCAGAAATACCCAGAAGCAGTGAAGCATTACAGTGAAGCTCTCAGGAGAAACCCCAAGGATCCAAGGGTATACAGCAACAGGGCCGCCTGTTATACCAAGCTTGGAGCAATGCCTGAAGGTCTCAAAGATGCTGAAAAATGCATTGAACTAGATCCTACATTCTCCAAGGGATACACAAGGAAAGGTGCAATCCAATTTTTCATGAAAGAATATGACAAAGCACTGGAAACCTATCAGGCCGGCTTAAAGCATGACCCGAACAACCAGGAGTTGCTTGATGGTGTTAGGAGATGTGTCCAGCGGATCAACAAGGCTAGCAGAGGGGAACTGAGCCAGGAGGAATTGCAAGAAAGACAGAACAAGGCTATGCAGGACCCAGAAATCCAGAACATTCTGAAGGATCCTATCATGCAGCAGGTGTTGACCGACTTCCAGGAGAATCCGAAGGCTGCTCAGGCGCATCTCAAGAACCCCGGAGTGATGCAGAAGATCCAGAAGCTAGTAAGTGCAGGGATAGTCCAAATGAAGTAGACATGCTGAAAGGGCCAGGGATAGAGTAATCTGATCGGTGTGCCTGGAAACTTCTGAATGCAAAATTCGTCGTCGAATTTTTGTACAGTACAATCGTGTTTATGCAAATTCCGATTGGTCATGGCTGAG]
[+] EMBL BI802373             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ccATCC ATTTTTCATGAAAGAATATGACAAAGCACTGGAAACCTATCAGGCCGGCCTAAAGCATGACCCGAACAACCAGGAGTTGCTTGATGGTGTTAGGAGATGTGTCCAGCGGATCAACAAGGCTAGCAGAGGGGAACTGAGCCAGGAGGAATTGCAAGAAAGACAGAACAAGGCTATGCAGGACCCAGAAATCCAGAACATTCTGAAGGATCCTATCATGCAGCAGGTGTTGACCGACTTCCAGGAGAATCCGAAGGCTGCTCAGGCGCATCTCAAGAACCCCGGAGTGATGCAGAAGATCCAGAAGCTAGTAAGTGCAGGGATAGTCCAAATGAAGTAGACATGCTGAAAGGGCCAGGGATAGAGTAATCTGATCGGTGTGCCTGGAAACTTCTGAATGC AAATTCGTCGTCGAATTTTTGTACAGTAC ATCGTGTTTATGC AATTCCGATTGGTCATaaaaaaa]


>consensus_15187#1 AAGGCGAGGGAACCTGAACCCGAGCCCGAGCCGATGGAGGTGACAGAGGAGGAGAAGGAG CGGAAGGAAAGGAAGGCCGCAGCGCAGGAGGAGAAAGAAGCGGGCAACGCCGCTTACAAG AAGGATTTTGAGACGGCGATCCAACACTACACAAAAGCCATGGAGCTCGACGATGAGGAC GTCTCCTACCTCACCAACCGAGCCGCCGTTTACCTTGAGATGGGAAAGTATGATGAGTGC ATCAACGACCGTGATAAGGCTGTTGAGAGGGGAAGGGAACTTCATGCTGATTTCAAGATC ATCTCTAGGGCACTGACCAGAAAGGGAACTGCTCTTGCTAAGATTGCTAAGTGCTTCAAA GATTATGATGTTGCCATTGAGACTTACCAAAAGGCTCTGACTGAGCACAGAAACCCAGAT ACCCTGAAGAAACTGAATGATGCTGAAATAGCAAAGAAGGAGCTAGAGCAGCAAGAGTAC TATGATCCAAAAATAGCTGATGAGGAGCGAGAGAAAGGTAATGAATTCTTCAAGCAGCAG AAATACCCAGAAGCAGTGAAGCATTACAGTGAAGCTCTCAGGAGAAACCCCAAGGATCCA AGGGTATACAGCAACAGGGCCGCCTGTTATACCAAGCTTGGAGCAATGCCTGAAGGTCTC AAAGATGCTGAAAAATGCATTGAACTAGATCCTACATTCTCCAAGGGATACACAAGGAAA GGTGCAATCCAATTTTTCATGAAAGAATATGACAAAGCACTGGAAACCTATCAGGCCGGC TTAAAGCATGACCCGAACAACCAGGAGTTGCTTGATGGTGTTAGGAGATGTGTCCAGCGG ATCAACAAGGCTAGCAGAGGGGAACTGAGCCAGGAGGAATTGCAAGAAAGACAGAACAAG GCTATGCAGGACCCAGAAATCCAGAACATTCTGAAGGATCCTATCATGCAGCAGGTGTTG ACCGACTTCCAGGAGAATCCGAAGGCTGCTCAGGCGCATCTCAAGAACCCCGGAGTGATG CAGAAGATCCAGAAGCTAGTAAGTGCAGGGATAGTCCAAATGAAGTAGACATGCTGAAAG GGCCAGGGATAGAGTAATCTGATCGGTGTGCCTGGAAACTTCTGAATGCAAAATTCGTCG TCGAATTTTTGTACAGTACAATCGTGTTTATGCAAATTCCGATTGGTCATGGCTGAG



consensusID : consensus_15187#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 852
fasta sequence
                              [CCCATTTGTGGGATCATTGACATTTGTTCGCATATACTCTGGGAAGCTGGTTGCTGGTTCATATGTTCTCAATGCAAACAAAGATAAGAAGGAAAGAATCGGAAGGCTTCTAGAGATGCATGCGAACAGTAAGGAAGATATAACAGTTGCTGTGGCAGGTGACATAGTAGCTCTTGCTGGTCTCAAAGATACAATTACTGGTGAAACTCTTAGTGACCCAGATAAGCCTGTTGTGCTTGAACGCATGGAATTTCCTGATCCTGTCATTAAAGTTGCTATTGAACCAAAGACCAAAGCTGATGCTGACAAAATGGCAACCGGACTAATCAAGCTTGCTCAAGAAGACCCATCATTCCACTTCTCAGGCGTGATGAAGGGAATTGAGGAAAGCTTGCCCAATGGTGTCCTTGCTGGTTACCCTGTTGTGGACCTCCGAGCGGTGCTGGTTGATGGCTCATACCATGATGTTGATTCAAGTGTCCTGGCATTCCAAATTGCAGCCAGAGGTGCATTCCGTGAAGGATTGAGGAAGGCTGGTCCAAGACTCCTGGAACCTATAATGAAAGTTGAGGTGATAACCCAGTGGTATATTATTATTTGATGCAGGTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCAAGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCACAGCACATCCAGAACGAGCTCTCTGCGGCGAAACAGGAGGAAGTAGCTTCTGGATCTTCTGCATCACTCCGGGGTTCTTGAGATGCGCCTGAGCAGCCTTCGGATTCTCCTGGAAGTCGGTCAACACCT]

[-] EMBL AK108496             [CCCATTTGTGGGATCATTGACATTTGTTCGCATATACTCTGGGAAGCTGGTTGCTGGTTCATATGTTCTCAATGCAAACAAAGATAAGAAGGAAAGAATCGGAAGGCTTCTAGAGATGCATGCGAACAGTAAGGAAGATATAACAGTTGCTGTGGCAGGTGACATAGTAGCTCTTGCTGGTCTCAAAGATACAATTACTGGTGAAACTCTTAGTGACCCAGATAAGCCTGTTGTGCTTGAACGCATGGAATTTCCTGATCCTGTCATTAAAGTTGCTATTGAACCAAAGACCAAAGCTGATGCTGACAAAATGGCAACCGGACTAATCAAGCTTGCTCAAGAAGACCCATCATTCCACTTCTCAGGCGTGATGAAGGGAATTGAGGAAAGCTTGCCCAATGGTGTCCTTGCTGGTTACCCTGTTGTGGACCTCCGAGCGGTGCTGGTTGATGGCTCATACCATGATGTTGATTCAAGTGTCCTGGCATTCCAAATTGCAGCCAGAGGTGCATTCCGTGAAGGATTGAGGAAGGCTGGTCCAAGACTCCTGGAACCTATAATGAAAGTTGAGGTGATAACCCAGTGGTATATTATTATTTGATGCAGGTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCAAGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCACAGCACATCCAGAACGAGCTCTCTGCGGCGAAACAGGAGGAAGTAGCTTCTGGATCTTCTGCATCACTCCGGGGTTCTTGAGATGCGCCTGAGCAGCCTTCGGATTCTCCTGGAAGTCGGTCAACACCT]


>consensus_15187#2 CCCATTTGTGGGATCATTGACATTTGTTCGCATATACTCTGGGAAGCTGGTTGCTGGTTC ATATGTTCTCAATGCAAACAAAGATAAGAAGGAAAGAATCGGAAGGCTTCTAGAGATGCA TGCGAACAGTAAGGAAGATATAACAGTTGCTGTGGCAGGTGACATAGTAGCTCTTGCTGG TCTCAAAGATACAATTACTGGTGAAACTCTTAGTGACCCAGATAAGCCTGTTGTGCTTGA ACGCATGGAATTTCCTGATCCTGTCATTAAAGTTGCTATTGAACCAAAGACCAAAGCTGA TGCTGACAAAATGGCAACCGGACTAATCAAGCTTGCTCAAGAAGACCCATCATTCCACTT CTCAGGCGTGATGAAGGGAATTGAGGAAAGCTTGCCCAATGGTGTCCTTGCTGGTTACCC TGTTGTGGACCTCCGAGCGGTGCTGGTTGATGGCTCATACCATGATGTTGATTCAAGTGT CCTGGCATTCCAAATTGCAGCCAGAGGTGCATTCCGTGAAGGATTGAGGAAGGCTGGTCC AAGACTCCTGGAACCTATAATGAAAGTTGAGGTGATAACCCAGTGGTATATTATTATTTG ATGCAGGTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTG AGAGGAATGACCAAGGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTC CCACAGCACATCCAGAACGAGCTCTCTGCGGCGAAACAGGAGGAAGTAGCTTCTGGATCT TCTGCATCACTCCGGGGTTCTTGAGATGCGCCTGAGCAGCCTTCGGATTCTCCTGGAAGT CGGTCAACACCT



consensusID : consensus_15187#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 525
fasta sequence
                              [TTCTCAATGCAAACAAAGATAAGAAGGAAAGAATCGGAAGGCTTCTAGAGATGCATGCGAACAGTAAGGAAGATATAACAGTTGCTGTGGCAGGTGACATAGTAGCTCTTGCTGGTCTCAAAGATACAATTACTGGTGAAACTCTTAGTGACCCAGATAAGCCTGTTGTGCTTGAACGCATGGAATTTCCTGATCCTGTCATTAAAGTTGCTATTGAACCAAAGACCAAAGCTGATGCTGACAAAATGGCAACCGGACTAATCAAGCTTGCTCAAGAAGACCCATCATTCCACTTCTCTAGAGATGAGGAGACCAACCAGACTGTTATTGAAGGAATGGGAGAATTGCACCTTGACATCATTGTTGACAGATTAAAGAGAGAATTNNNNNNTGAAGCAAATGTTGGAGCTCNGCAAGTCAACTACCGTNNNNGTATTTCCAAGATTTCNNNAGNNNNNNACGTTCANNNNNNNCAGTCTGNTNGATCTGGGCAATTNGNNNNCATTANTGTGCGANNNNNNNCTN]

[+] EMBL CF195748             [TTCTCAATGCAAACAAAGATAAGAAGGAAAGAATCGGAAGGCTTCTAGAGATGCATGCGAACAGTAAGGAAGATATAACAGTTGCTGTGGCAGGTGACATAGTAGCTCTTGCTGGTCTCAAAGATACAATTACTGGTGAAACTCTTAGTGACCCAGATAAGCCTGTTGTGCTTGAACGCATGGAATTTCCTGATCCTGTCATTAAAGTTGCTATTGAACCAAAGACCAAAGCTGATGCTGACAAAATGGCAACCGGACTAATCAAGCTTGCTCAAGAAGACCCATCATTCCACTTCTCTAGAGATGAGGAGACCAACCAGACTGTTATTGAAGGAATGGGAGAATTGCACCTTGACATCATTGTTGACAGATTAAAGAGAGAATTNNNNNNTGAAGCAAATGTTGGAGCTCNGCAAGTCAACTACCGTNNNNGTATTTCCAAGATTTCNNNAGNNNNNNACGTTCANNNNNNNCAGTCTGNTNGATCTGGGCAATTNGNNNNCATTANTGTGCGANNNNNNNCTN]


>consensus_15187#3 TTCTCAATGCAAACAAAGATAAGAAGGAAAGAATCGGAAGGCTTCTAGAGATGCATGCGA ACAGTAAGGAAGATATAACAGTTGCTGTGGCAGGTGACATAGTAGCTCTTGCTGGTCTCA AAGATACAATTACTGGTGAAACTCTTAGTGACCCAGATAAGCCTGTTGTGCTTGAACGCA TGGAATTTCCTGATCCTGTCATTAAAGTTGCTATTGAACCAAAGACCAAAGCTGATGCTG ACAAAATGGCAACCGGACTAATCAAGCTTGCTCAAGAAGACCCATCATTCCACTTCTCTA GAGATGAGGAGACCAACCAGACTGTTATTGAAGGAATGGGAGAATTGCACCTTGACATCA TTGTTGACAGATTAAAGAGAGAATTNNNNNNTGAAGCAAATGTTGGAGCTCNGCAAGTCA ACTACCGTNNNNGTATTTCCAAGATTTCNNNAGNNNNNNACGTTCANNNNNNNCAGTCTG NTNGATCTGGGCAATTNGNNNNCATTANTGTGCGANNNNNNNCTN



consensusID : consensus_15187#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 321
fasta sequence
                              [CGTGCCGAATTCGGCACGAGGGTGATAACCCCTGAGGAGCATTTGGGTGATGTTATTGGTGATTTGAACTCCAGAAGAGGACAGGTCAATAGCTTCGGGGATAAACCTGGTGGCCTGAAGGTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCAAGGGGGCGCGTCTTACACCATGCAACTCGCCAAGTTCGACAGTCGTCCCACACACACATTCACAAACGAGCTCTCTGTGGCGAAACCAGGAGGAAGCTAGTACTGCTTAATTTTTTTTCCAAATTTTGGTAGAT]

[+] EMBL BE230201             [CGTGCCGAATTCGGCACGAGGGTGATAACCCCTGAGGAGCATTTGGGTGATGTTATTGGTGATTTGAACTCCAGAAGAGGACAGGTCAATAGCTTCGGGGATAAACCTGGTGGCCTGAAGGTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCAAGGGGGCGCGTCTTACACCATGCAACTCGCCAAGTTCGACAGTCGTCCCACACACACATTCACAAACGAGCTCTCTGTGGCGAAACCAGGAGGAAGCTAGTACTGCTTAATTTTTTTTCCAAATTTTGGTAGAT]


>consensus_15187#4 CGTGCCGAATTCGGCACGAGGGTGATAACCCCTGAGGAGCATTTGGGTGATGTTATTGGT GATTTGAACTCCAGAAGAGGACAGGTCAATAGCTTCGGGGATAAACCTGGTGGCCTGAAG GTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGA ATGACCAAGGGGGCGCGTCTTACACCATGCAACTCGCCAAGTTCGACAGTCGTCCCACAC ACACATTCACAAACGAGCTCTCTGTGGCGAAACCAGGAGGAAGCTAGTACTGCTTAATTT TTTTTCCAAATTTTGGTAGAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15187#2      ------------------------------------------------------------
consensus_15187#3      ------------------------------------------------------------
consensus_15187#0      AATATCTGCCATCTTTGTTCCTGTTCTATGTGGTTCGGCCTTTAAAAACAAGGGTGTCCA 60
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      ------------------------------------------------------------
                                                                                   

consensus_15187#2      ------------------------------------------------------------
consensus_15187#3      ------------------------------------------------------------
consensus_15187#0      ACCACTGCTTGATGCTGTTGTTGATTACTTGCCATCACCACTTGACCTACCACCAATGAA 120
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      ------------------------------------------------------------
                                                                                   

consensus_15187#2      ------------------------------------------------------------
consensus_15187#3      ------------------------------------------------------------
consensus_15187#0      GGGCACTGATCCAGAGGACCCTGAACTGATCCTTGAAAGAAAGCCTAGTGATGATGAGCC 180
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      ------------------------------------------------------------
                                                                                   

consensus_15187#2      ---------------------------------CCCATTTGTGGGATCATTGACATTTGT 27
consensus_15187#3      ------------------------------------------------------------
consensus_15187#0      ATTTTCTGGGTTAGCTTTCAAGATCATGACTGACCCATTTGTGGGATCATTGACATTTGT 240
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      ------------------------------------------------------------
                                                                                   

consensus_15187#2      TCGCATATACTCTGGGAAGCTGGTTGCTGGTTCATATGTTCTCAATGCAAACAAAGATAA 87
consensus_15187#3      --------------------------------------TTCTCAATGCAAACAAAGATAA 22
consensus_15187#0      TCGCATATACTCTGGGAAGCTGGTTGCTGGTTCATATGTTCTCAATGCAAACAAAGATAA 300
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      -------------------------------------------AAGGCGAGGGAACCTGA 17
                                                                                   

consensus_15187#2      GAAGGAAAGAATCGGAAGGCTTCTAGAGATGCATGCGAACAGTAAGGAAGATATAACAGT 147
consensus_15187#3      GAAGGAAAGAATCGGAAGGCTTCTAGAGATGCATGCGAACAGTAAGGAAGATATAACAGT 82
consensus_15187#0      GAAGGAAAGAATCGGAAGGCTTCTAGAGATGCATGCGAACAGTAAGGAAGATATAACAGT 360
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      ACCCGAGCCCGAGCCGATGGAGGTGACAGAGGAGGAGAAGGAGCGGAAGGAAAGGAAGGC 77
                                                                                   

consensus_15187#2      TGCTGTGGCAGGTGACATAGTAGCTCTTGCTGGTCTCAAAGATACAATTACTGGTGAAAC 207
consensus_15187#3      TGCTGTGGCAGGTGACATAGTAGCTCTTGCTGGTCTCAAAGATACAATTACTGGTGAAAC 142
consensus_15187#0      TGCTGTGGCAGGTGACATAGTAGCTCTTGCTGGTCTCAAAGATACAATTACTGGTGAAAC 420
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      CGCAGCGCAGGAGGAGAAAGAAGCGGGCAACGCCGCTTACAAGAAGGATTTTGAGACGGC 137
                                                                                   

consensus_15187#2      TCTTAGTGACCCAGATAAGCCTGTTGTGCTTGAACGCATGGAATTTCCTGATCCTGTCAT 267
consensus_15187#3      TCTTAGTGACCCAGATAAGCCTGTTGTGCTTGAACGCATGGAATTTCCTGATCCTGTCAT 202
consensus_15187#0      TCTTAGTGACCCAGATAAGCCTGTTGTGCTTGAACGCATGGAATTTCCTGATCCTGTCAT 480
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      GATCCAACACTACACAAAAGCCATGGAGCTCGACGATGAGGACGTCTCCTACCTCACCAA 197
                                                                                   

consensus_15187#2      TAAAGTTGCTATTGAACCAAAGACCAAAGCTGATGCTGACAAAATGG-CAACCGGACTAA 326
consensus_15187#3      TAAAGTTGCTATTGAACCAAAGACCAAAGCTGATGCTGACAAAATGG-CAACCGGACTAA 261
consensus_15187#0      TAAAGTTGCTATTGAACCAAAGACCAAAGCTGATGCTGACAAAATGG-CAACCGGACTAA 539
consensus_15187#4      -CGTGCCGAATTCGGCACGAGGGTGATAACCCCTGAGGAGCATTTGGGTGATGTTATTGG 59
consensus_15187#1      CCGAGCCGCCGTTTACCTTGAGATGGGAAAGTATGATGAGTGCATCAACGACCGTGATAA 257
                           *  *   *         *     *     **  **     *     *      *  

consensus_15187#2      TCAAGCTTGCTCAAGAAGACCCATCATTCCACTTCTCAGGCGTGATGAAGGGAA--TTGA 384
consensus_15187#3      TCAAGCTTGCTCAAGAAGACCCATCATTCCACTTCTCTAGAG--ATGAGGAGA---CCAA 316
consensus_15187#0      TCAAGCTTGCTCAAGAAGACCCATCATTCCACTTCTCTAGAG--ATGAGGAGA---CCAA 594
consensus_15187#4      TGATTTGAACTCCAGAAGAGG-ACAGGTCAATAGCTTCGGGG--ATAAACCTG---GTGG 113
consensus_15187#1      GGCTGTTGAGAGGGGAAGGGA-ACTTCATGCTGATTTCAAGATCATCTCTAGGGCACTGA 316
                                     ****    *            *        **              

consensus_15187#2      GGAAAGCT----TGCCCAATGGTGTCCTTGCTGGTTAC---CCTGTTGTGGACCTC-CGA 436
consensus_15187#3      CCAGACTG----TTATTGAAGGAATGGGAG--AATTGC---ACCTT----GACATC-ATT 362
consensus_15187#0      CCAGACTG----TTATTGAAGGAATGGGAG--AATTGC---ACCTT----GACATC-ATT 640
consensus_15187#4      CCTGAAGG----TTGTCGATGCT-TTCGTGCCACTTGC---GGA------GATGTT-CCA 158
consensus_15187#1      CCAGAAAGGGAACTGCTCTTGCTAAGATTGCTAAGTGCTTCAAAGATTATGATGTTGCCA 376
                           *               *        *     * *            **  *     

consensus_15187#2      GCGGTGCTGGTTGATGGCTCATACCATGATGTTGATTCAAGTGTCCTGGCATTCCAAATT 496
consensus_15187#3      GTTG-ACAGATTAAAGAG--AGAATTNNNNNNTGAAGCAAATGTTGGAGCTCNGCAAGTC 419
consensus_15187#0      GTTG-ACAGATTAAAGAG--AGAATTCAGGGTTGAAGCAAATGTTGGAGCTCCGCAAGTC 697
consensus_15187#4      GTACGTCAGCACGCTGAG--AGGAATGACCAAGGGGGCGCGTCTTACACCA-TGCAACTC 215
consensus_15187#1      TTGAGACTTACCAAAAGGCTCTGACTGAGCACAGAAACCCA-GATACCCTGAAGAAACTG 435
                             *                          *   *                 ** * 

consensus_15187#2      G-CAGCCAGAGGTGCATTCCGTGAAGGATTGAGGAAG-GCTGGTCCAAGACTCCTGGAAC 554
consensus_15187#3      AACTACCGTNNNNGTATTTCC---AAGATTTCNNNAG-NNNNNNACG---TTCANNNNNN 472
consensus_15187#0      AACTACCGTGAAAGTATTTCC---AAGATTTCAGAAG-TACAATACG---TTCACAAGAA 750
consensus_15187#4      GCCAAGTTCGACAGTCGTCCCACACACACATTCACAA-ACGAGCTC-----TCTGTGGCG 269
consensus_15187#1      AATGATGCTGA-AATAGCAAAGAAGGAGCTAGAGCAGCAAGAGTACTATGATCCAAAAAT 494
                                                          *         *     **       

consensus_15187#2      CTATAATGAAAGTTGAGGTGATAACCCAGTGGTATATTATTATTTGATGCAGGTTGTCGA 614
consensus_15187#3      NCAGTCTGNTNGATCTGG--GCAATTNGNNNNCAT--TANTGTGCGANNNNNNNCTN--- 525
consensus_15187#0      ACAGTCTGGTGGATCTGG--GCAATTTGCGGACAT--TATTGTGCGATTCGAGCCTTTGG 806
consensus_15187#4      AAACCAGGAGGAAGCTAGTACTGCTTAATTTTTTTTCCAAATTTTGGTAGAT-------- 321
consensus_15187#1      AGCTGATGAGG-AGCGAGAGAAAGGTAATGAATTCTTCAAGCAGCAGAAATACCCAGAAG 553
                              *         *                    *                     

consensus_15187#2      TGCTTTCGTGCCACTTGCGGAGATGTTCCAGTACGTCAGCACGCTGAGAGGAATGACCAA 674
consensus_15187#3      ------------------------------------------------------------
consensus_15187#0      AGGCTGGAAG-----TGGGTATGAATTCAAGAGTGAAATAAAGGGAGGGGCAGTTCCAAA 861
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      CAGTGAAGCATTACAGTGAAGCTCTCAGGAGAAACCCCAAGGATCCAAGGGTATACAGCA 613
                                                                                   

consensus_15187#2      GGGGCGCGCGTCTTACACGATGCAGCTCGCCAAGTTCGACGTCGTCCCACAGCACATCCA 734
consensus_15187#3      ------------------------------------------------------------
consensus_15187#0      AGAATATGTACCAGGCGTGATGAAGGGAATTGAGGAAAGCTTGCCCAATGGTGTCCTTGC 921
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      ACAGGGCCGCCTGTTATACCAAGCTTGGAGCAATGCCTGAAGGTCTCAAAGATGCTGAAA 673
                                                                                   

consensus_15187#2      GAACGAGCTCTCTGCGGCGAAACAGGAGGAAGTAGCTTCTGGATCTTCT----GCATCAC 790
consensus_15187#3      ------------------------------------------------------------
consensus_15187#0      TGGTTACCCTGTTGTGGACCTCCGAGCGGTGCTGGTTGATGGCTCATACCATGATGTTGA 981
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      AATGCATTGAACTAGATCCTACATTCTCCAAGGGATACACAAGGAAAGGTGCAATCCAAT 733
                                                                                   

consensus_15187#2      TCCGGGGTTCTTGAGATGCGCCTGAGCAGCCTTCGGATTCTCCTGGAAGTCGGTCAACAC 850
consensus_15187#3      ------------------------------------------------------------
consensus_15187#0      TTCAAGTGTCCTGGCATTCCAAATTGCAGCCAGAGGTGCATTCCGTGAAGGATTGAGGAA 1041
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      TTTTCATGAAAGAATATGACAAAGCACTGGAAACCTATCAGGCCGGCTTAAAGCATGACC 793
                                                                                   

consensus_15187#2      CT---------------------------------------------------------- 852
consensus_15187#3      ------------------------------------------------------------
consensus_15187#0      GGCTGGTCCAAGACTCCTGGAACCTATAATGAAAGTTGAGGTGATAACCCCTGAGGAGCA 1101
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      CGAACAACCAGGAGTTGCTTGATGGTGTTAGGAGATGTGTCCAGCGGATCAACAAGGCTA 853
                                                                                   

consensus_15187#2      ------------------------------------------------------------
consensus_15187#3      ------------------------------------------------------------
consensus_15187#0      TTTGGGTGATGTTATTGGTGATTTGAACTCCAGAAGAGGACAGGTCAATAGCTTCGGGGA 1161
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      GCAGAGGGGAACTGAGCCAGGAGGAATTGCAAGAAAGACAGAACAAGGCTATGCAGGACC 913
                                                                                   

consensus_15187#2      ------------------------------------------------------------
consensus_15187#3      ------------------------------------------------------------
consensus_15187#0      TAAACCTGGTGGCCTGAAGGTTGTCGATGCTTTCGTGCCACTTGCGGAGATGTTCCAGTA 1221
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      CAGAAATCCAGAACATTCTGAAGGATCCTATCATGCAGCAGGTGTTGACCGACTTCCAGG 973
                                                                                   

consensus_15187#2      ------------------------------------------------------------
consensus_15187#3      ------------------------------------------------------------
consensus_15187#0      CGTCAGCACGCTGAGAGGAATGACCAAGGGGCGCGCGTCTTACACGATGCAGCTCGCCAA 1281
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      AGAATCCGAAGGCTGCTCAGGCGCATCTCAAGAACCCCGGAGTGATGCAGAAGATCCAGA 1033
                                                                                   

consensus_15187#2      ------------------------------------------------------------
consensus_15187#3      ------------------------------------------------------------
consensus_15187#0      GTTCGACGTCGTCCCACAGCACATCCAGAACGAGCTCTCTGCGGCGAAACAGGAGGAAGC 1341
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      AGCTAGTAAGTGCAGGGATAGTCCAAATGAAGTAGACATGCTGAAAGGGCCAGGGATAGA 1093
                                                                                   

consensus_15187#2      ------------------------------------------------------------
consensus_15187#3      ------------------------------------------------------------
consensus_15187#0      TAGTACTGCTTAATTTTTTTTCCAGATTTTGGTAGATATACTAAACGGCGACACCGGAGC 1401
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      GTAATCTGATCGGTGTGCCTGGAAACTTCTGAATGCAAAATTCGTCGTCGAATTTTTGTA 1153
                                                                                   

consensus_15187#2      ------------------------------------------------------------
consensus_15187#3      ------------------------------------------------------------
consensus_15187#0      AGGTGGATAATAGGACATCCAAGTGTATGTAGCTTTGTAGCGTCAAGCCCCTCGGGGAGA 1461
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      CAGTACAATCGTGTTTATGCAAATTCCGATTGGTCATGGCTGAG---------------- 1197
                                                                                   

consensus_15187#2      ------------------------------------------------------------
consensus_15187#3      ------------------------------------------------------------
consensus_15187#0      TATTGTTTGCCATTGTTTTGGACCTGATAATGGCCTTGTCAAGTTCTTTTCTTCTTTTTG 1521
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      ------------------------------------------------------------
                                                                                   

consensus_15187#2      ------------------------------------------------------------
consensus_15187#3      ------------------------------------------------------------
consensus_15187#0      AAGACTGCCTTGTTAAGGTTTTCAGAAGAGAAAGCGGTACCTATAAAATTTTTGTTTCCT 1581
consensus_15187#4      ------------------------------------------------------------
consensus_15187#1      ------------------------------------------------------------
                                                                                   

consensus_15187#2      --------------------------------------
consensus_15187#3      --------------------------------------
consensus_15187#0      TGCTCTAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAC 1619
consensus_15187#4      --------------------------------------
consensus_15187#1      --------------------------------------
                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)