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Oryza sativa
cluster # 1524 cluster # 1524       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1524#0 length = 2781 sequences # 1  
consensus_1524#1 length = 1612 sequences # 1  

consensusID : consensus_1524#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2781
fasta sequence
                              [TTACCGGTTACCACAAAGGGTACTCTTTGATTTCTATAGAAAAAACACGATATTCAAATTGTTATTAGCTTTTCAAGGCATATTTACCTGAAAAACTGCAGCAAACTTTTCATTACTTATTGACTAGTATGTAATGCCCTGTTAGATATATTGGACCACCAAATTGTCTAGACACATCAATTTCTGTAAACTGATGCTGGACTGGGTTAGAGATTTTGAGGCCATGAAAACTTGCTCTTGTTTTATGAAACAGTGGGCCATGTTAGTTGTACTGGCTATTTATTACTTAATAAAATAAACAGTGACAACATTATTGTTCTTCTATTCCTGTGCATGTTGCCAAATGTTTTTTGAAATTCAGAAAATGTTACAGAATGTGAACTTCCAACAGGGGAACCGAAGGCAGTGCAGAGCACGTCATCTTTGTATTCACTAAATCAAAGATTGATGCACTTTGCTAATTGGTTGCTGGAGATAGTTGCCCTGGGTAACCTTGATGCCTTTTTTCCTGCTGCAACTCGCGAGTATGCACCTATCGTTGAAGAGGTTTGGAAAGATCCAGCTATTCAAGCCACATATAAAAGGAAAAATGAGTTGCACTTTCTTCCTGATGTCGCCAGTTATTTTCTTGATAGGGTGGTTGAAATATCCAGCAATGAATATGAACCAACCGAGACAGATATCTTGTATGCAGAGGGTGTAAACCAATGGAATGGCCTCTCTACACTTGAATTCTCGCTTGATGACCGAGGTCCCCTCTCTGACTCATACGCTGACAAAGCTGGCAATCCAGCCATACAAACAAAGTATCAACTGATCCGCATGAACTCCAAGGGGCTAACTGGAGGCTTCAAGTGCCTCGGGATGCTGGAGGACATCCGTGCCATAATCTTCTGCATCTCGCTTGCGGACTACGACCAAACATGGGTGCAGAGCTCAGGAGAACCCTGCAACAAGATGATCGCCAGCCGGGATTTGTTTGAGGATGTGATCAGGCACCCTTCCTTTGAGGACACCCCCTGTGTACTCCTCCTCAACAAGTACGACGCCTTCGAGGAGAAGATCAGTAGGGTGCCACTGACAGTGTGCGAGTGGTTCGCTGACTTCAGCCCCGTCAGGCCTCACCACACCAGCCAGACATCGCTGGCCAGCCACGCCTACTACTACGTCGCCGTGAAGTTTAAGGACCTCTACTCCTCCGTCGCTGATGGCCGGAAGCTGTTTGTGTTCCAGACGAAGGCGCTGGAGCGGCGAACCGTCGACGACGCCTTCAGGTACATCCGGGAGGTGCTGAGATGGGATGACGTGAAGAACAGCGATGCCGGCTATTGCAGCGCTGACGAGTCCTCGTACAGTGTGGACATGACGACCTCTCCATCCTAATCGCTGTTTATCAGTTACCATCTGGTGAGATGTTTTGCTGTGGTTAGAAGATATTGGAGGTATTTATACCTCTTTACTTGATTACTTCTAGTATCTCCAATCACCATAAAACATCTCTGCATCAATAGTAGTTGCGTTTAGGGGCCTAGTCTTTTCATGTTTGCCTTGTAGTAGATATGTTTTCTTGAAATATTTGCACCCTTTTGTTGAACCTGCTGTAGTTTTCTGTTTAATTAGTAGCCTTATTCTTCCTGTAAGTAAATAGAGGAGTAATCTCCTGCGTATAACGACACCGTTTCTATCTGTTAGCGTTGTTCTCCCTATAAATGGAGAGGATGAATTTTATTTTGCATTCTATATTTCTATCTCGTTTGTGTTTGTGCTTATTCTTGATGCAAAGTCACCAATGTGAAAAAAAAGGTAAAGTGTTTTACTTAATTTGTCTGGAACGCAAGTCTTGCTGATTTCACTTTTGTTCACTTTAGAGATTTGTTTCCCCAAGATATGCTTAGGACATAATACAAGCAGCTGCAAAGTACACCCTTACTACATTTATAAATTGATGAAAGCCACACATAGATCAGAACAATCTGTGTACCTGACAAAGTCCTTGTTGGAGCTTACTCGTATGTACAAACATGTACATTTATCATGTTAATGTTGCCTGTTCAGATGAAATAACTGTGATGTTTTGTCCCTTTTTCTCTGAGAGGAAAATGAATGAAAACAACTATACTCTAATTTGAAATTTGGGAAAAGAAAAGGACATCGCCTTCTATCTTACTTCAATGCTTAGTAACATAGGTACTGATGTAAGTATAAACCATTACTTGTAATAATCTCTGTTAGTCGCGTGGGTTAATCCTGTCCGCCTCCCACGCGCGAAGCCACGCCGCCACGTCGCCGGCGGCGAGCGACCGCGCCGCCGCGTACACACCGTCGCTGTCACGATGGCGACGCCAGTAGCGGCGCCGCTCGACCGCGTGAGCGATGTGGCATCCGACCACGACGGCGCCGACGAAGACGGCCTTGCCGCTCAACGCCGCCGCCGTGTGGCTGATGGCCGACGCCTCCGCCGGCGGGAGGGGCGCCACGGCCACCTCCTCCGTCATCGCCACCAGCAAGTCCGTCACCGTGATCCCACCGGTGACGGTCACGAGAGCTCGCCGCCGGCCGCCGCTCGCACGGCGGCGCGGGAAGCCACGCCGGCGACCCTGCCCACCACAGCCTGCGTCTACGTATGTACTATGAGTACAAGATGGAGACGTATGTGACATTGGGGGTGACCGTATGCATGTATGCATATGTTGCTGACTTAAAACTTGGCCACGACTATGATCTTGTAATTTGTAAACATGGAAATATTATTACACAATGGTAATATATTTGTTCCTAATT]

[+] EMBL AK119385             [TTACCGGTTACCACAAAGGGTACTCTTTGATTTCTATAGAAAAAACACGATATTCAAATTGTTATTAGCTTTTCAAGGCATATTTACCTGAAAAACTGCAGCAAACTTTTCATTACTTATTGACTAGTATGTAATGCCCTGTTAGATATATTGGACCACCAAATTGTCTAGACACATCAATTTCTGTAAACTGATGCTGGACTGGGTTAGAGATTTTGAGGCCATGAAAACTTGCTCTTGTTTTATGAAACAGTGGGCCATGTTAGTTGTACTGGCTATTTATTACTTAATAAAATAAACAGTGACAACATTATTGTTCTTCTATTCCTGTGCATGTTGCCAAATGTTTTTTGAAATTCAGAAAATGTTACAGAATGTGAACTTCCAACAGGGGAACCGAAGGCAGTGCAGAGCACGTCATCTTTGTATTCACTAAATCAAAGATTGATGCACTTTGCTAATTGGTTGCTGGAGATAGTTGCCCTGGGTAACCTTGATGCCTTTTTTCCTGCTGCAACTCGCGAGTATGCACCTATCGTTGAAGAGGTTTGGAAAGATCCAGCTATTCAAGCCACATATAAAAGGAAAAATGAGTTGCACTTTCTTCCTGATGTCGCCAGTTATTTTCTTGATAGGGTGGTTGAAATATCCAGCAATGAATATGAACCAACCGAGACAGATATCTTGTATGCAGAGGGTGTAAACCAATGGAATGGCCTCTCTACACTTGAATTCTCGCTTGATGACCGAGGTCCCCTCTCTGACTCATACGCTGACAAAGCTGGCAATCCAGCCATACAAACAAAGTATCAACTGATCCGCATGAACTCCAAGGGGCTAACTGGAGGCTTCAAGTGCCTCGGGATGCTGGAGGACATCCGTGCCATAATCTTCTGCATCTCGCTTGCGGACTACGACCAAACATGGGTGCAGAGCTCAGGAGAACCCTGCAACAAGATGATCGCCAGCCGGGATTTGTTTGAGGATGTGATCAGGCACCCTTCCTTTGAGGACACCCCCTGTGTACTCCTCCTCAACAAGTACGACGCCTTCGAGGAGAAGATCAGTAGGGTGCCACTGACAGTGTGCGAGTGGTTCGCTGACTTCAGCCCCGTCAGGCCTCACCACACCAGCCAGACATCGCTGGCCAGCCACGCCTACTACTACGTCGCCGTGAAGTTTAAGGACCTCTACTCCTCCGTCGCTGATGGCCGGAAGCTGTTTGTGTTCCAGACGAAGGCGCTGGAGCGGCGAACCGTCGACGACGCCTTCAGGTACATCCGGGAGGTGCTGAGATGGGATGACGTGAAGAACAGCGATGCCGGCTATTGCAGCGCTGACGAGTCCTCGTACAGTGTGGACATGACGACCTCTCCATCCTAATCGCTGTTTATCAGTTACCATCTGGTGAGATGTTTTGCTGTGGTTAGAAGATATTGGAGGTATTTATACCTCTTTACTTGATTACTTCTAGTATCTCCAATCACCATAAAACATCTCTGCATCAATAGTAGTTGCGTTTAGGGGCCTAGTCTTTTCATGTTTGCCTTGTAGTAGATATGTTTTCTTGAAATATTTGCACCCTTTTGTTGAACCTGCTGTAGTTTTCTGTTTAATTAGTAGCCTTATTCTTCCTGTAAGTAAATAGAGGAGTAATCTCCTGCGTATAACGACACCGTTTCTATCTGTTAGCGTTGTTCTCCCTATAAATGGAGAGGATGAATTTTATTTTGCATTCTATATTTCTATCTCGTTTGTGTTTGTGCTTATTCTTGATGCAAAGTCACCAATGTGAAAAAAAAGGTAAAGTGTTTTACTTAATTTGTCTGGAACGCAAGTCTTGCTGATTTCACTTTTGTTCACTTTAGAGATTTGTTTCCCCAAGATATGCTTAGGACATAATACAAGCAGCTGCAAAGTACACCCTTACTACATTTATAAATTGATGAAAGCCACACATAGATCAGAACAATCTGTGTACCTGACAAAGTCCTTGTTGGAGCTTACTCGTATGTACAAACATGTACATTTATCATGTTAATGTTGCCTGTTCAGATGAAATAACTGTGATGTTTTGTCCCTTTTTCTCTGAGAGGAAAATGAATGAAAACAACTATACTCTAATTTGAAATTTGGGAAAAGAAAAGGACATCGCCTTCTATCTTACTTCAATGCTTAGTAACATAGGTACTGATGTAAGTATAAACCATTACTTGTAATAATCTCTGTTAGTCGCGTGGGTTAATCCTGTCCGCCTCCCACGCGCGAAGCCACGCCGCCACGTCGCCGGCGGCGAGCGACCGCGCCGCCGCGTACACACCGTCGCTGTCACGATGGCGACGCCAGTAGCGGCGCCGCTCGACCGCGTGAGCGATGTGGCATCCGACCACGACGGCGCCGACGAAGACGGCCTTGCCGCTCAACGCCGCCGCCGTGTGGCTGATGGCCGACGCCTCCGCCGGCGGGAGGGGCGCCACGGCCACCTCCTCCGTCATCGCCACCAGCAAGTCCGTCACCGTGATCCCACCGGTGACGGTCACGAGAGCTCGCCGCCGGCCGCCGCTCGCACGGCGGCGCGGGAAGCCACGCCGGCGACCCTGCCCACCACAGCCTGCGTCTACGTATGTACTATGAGTACAAGATGGAGACGTATGTGACATTGGGGGTGACCGTATGCATGTATGCATATGTTGCTGACTTAAAACTTGGCCACGACTATGATCTTGTAATTTGTAAACATGGAAATATTATTACACAATGGTAATATATTTGTTCCTAATT]


>consensus_1524#0 TTACCGGTTACCACAAAGGGTACTCTTTGATTTCTATAGAAAAAACACGATATTCAAATT GTTATTAGCTTTTCAAGGCATATTTACCTGAAAAACTGCAGCAAACTTTTCATTACTTAT TGACTAGTATGTAATGCCCTGTTAGATATATTGGACCACCAAATTGTCTAGACACATCAA TTTCTGTAAACTGATGCTGGACTGGGTTAGAGATTTTGAGGCCATGAAAACTTGCTCTTG TTTTATGAAACAGTGGGCCATGTTAGTTGTACTGGCTATTTATTACTTAATAAAATAAAC AGTGACAACATTATTGTTCTTCTATTCCTGTGCATGTTGCCAAATGTTTTTTGAAATTCA GAAAATGTTACAGAATGTGAACTTCCAACAGGGGAACCGAAGGCAGTGCAGAGCACGTCA TCTTTGTATTCACTAAATCAAAGATTGATGCACTTTGCTAATTGGTTGCTGGAGATAGTT GCCCTGGGTAACCTTGATGCCTTTTTTCCTGCTGCAACTCGCGAGTATGCACCTATCGTT GAAGAGGTTTGGAAAGATCCAGCTATTCAAGCCACATATAAAAGGAAAAATGAGTTGCAC TTTCTTCCTGATGTCGCCAGTTATTTTCTTGATAGGGTGGTTGAAATATCCAGCAATGAA TATGAACCAACCGAGACAGATATCTTGTATGCAGAGGGTGTAAACCAATGGAATGGCCTC TCTACACTTGAATTCTCGCTTGATGACCGAGGTCCCCTCTCTGACTCATACGCTGACAAA GCTGGCAATCCAGCCATACAAACAAAGTATCAACTGATCCGCATGAACTCCAAGGGGCTA ACTGGAGGCTTCAAGTGCCTCGGGATGCTGGAGGACATCCGTGCCATAATCTTCTGCATC TCGCTTGCGGACTACGACCAAACATGGGTGCAGAGCTCAGGAGAACCCTGCAACAAGATG ATCGCCAGCCGGGATTTGTTTGAGGATGTGATCAGGCACCCTTCCTTTGAGGACACCCCC TGTGTACTCCTCCTCAACAAGTACGACGCCTTCGAGGAGAAGATCAGTAGGGTGCCACTG ACAGTGTGCGAGTGGTTCGCTGACTTCAGCCCCGTCAGGCCTCACCACACCAGCCAGACA TCGCTGGCCAGCCACGCCTACTACTACGTCGCCGTGAAGTTTAAGGACCTCTACTCCTCC GTCGCTGATGGCCGGAAGCTGTTTGTGTTCCAGACGAAGGCGCTGGAGCGGCGAACCGTC GACGACGCCTTCAGGTACATCCGGGAGGTGCTGAGATGGGATGACGTGAAGAACAGCGAT GCCGGCTATTGCAGCGCTGACGAGTCCTCGTACAGTGTGGACATGACGACCTCTCCATCC TAATCGCTGTTTATCAGTTACCATCTGGTGAGATGTTTTGCTGTGGTTAGAAGATATTGG AGGTATTTATACCTCTTTACTTGATTACTTCTAGTATCTCCAATCACCATAAAACATCTC TGCATCAATAGTAGTTGCGTTTAGGGGCCTAGTCTTTTCATGTTTGCCTTGTAGTAGATA TGTTTTCTTGAAATATTTGCACCCTTTTGTTGAACCTGCTGTAGTTTTCTGTTTAATTAG TAGCCTTATTCTTCCTGTAAGTAAATAGAGGAGTAATCTCCTGCGTATAACGACACCGTT TCTATCTGTTAGCGTTGTTCTCCCTATAAATGGAGAGGATGAATTTTATTTTGCATTCTA TATTTCTATCTCGTTTGTGTTTGTGCTTATTCTTGATGCAAAGTCACCAATGTGAAAAAA AAGGTAAAGTGTTTTACTTAATTTGTCTGGAACGCAAGTCTTGCTGATTTCACTTTTGTT CACTTTAGAGATTTGTTTCCCCAAGATATGCTTAGGACATAATACAAGCAGCTGCAAAGT ACACCCTTACTACATTTATAAATTGATGAAAGCCACACATAGATCAGAACAATCTGTGTA CCTGACAAAGTCCTTGTTGGAGCTTACTCGTATGTACAAACATGTACATTTATCATGTTA ATGTTGCCTGTTCAGATGAAATAACTGTGATGTTTTGTCCCTTTTTCTCTGAGAGGAAAA TGAATGAAAACAACTATACTCTAATTTGAAATTTGGGAAAAGAAAAGGACATCGCCTTCT ATCTTACTTCAATGCTTAGTAACATAGGTACTGATGTAAGTATAAACCATTACTTGTAAT AATCTCTGTTAGTCGCGTGGGTTAATCCTGTCCGCCTCCCACGCGCGAAGCCACGCCGCC ACGTCGCCGGCGGCGAGCGACCGCGCCGCCGCGTACACACCGTCGCTGTCACGATGGCGA CGCCAGTAGCGGCGCCGCTCGACCGCGTGAGCGATGTGGCATCCGACCACGACGGCGCCG ACGAAGACGGCCTTGCCGCTCAACGCCGCCGCCGTGTGGCTGATGGCCGACGCCTCCGCC GGCGGGAGGGGCGCCACGGCCACCTCCTCCGTCATCGCCACCAGCAAGTCCGTCACCGTG ATCCCACCGGTGACGGTCACGAGAGCTCGCCGCCGGCCGCCGCTCGCACGGCGGCGCGGG AAGCCACGCCGGCGACCCTGCCCACCACAGCCTGCGTCTACGTATGTACTATGAGTACAA GATGGAGACGTATGTGACATTGGGGGTGACCGTATGCATGTATGCATATGTTGCTGACTT AAAACTTGGCCACGACTATGATCTTGTAATTTGTAAACATGGAAATATTATTACACAATG GTAATATATTTGTTCCTAATT



consensusID : consensus_1524#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1612
fasta sequence
                              [TTTCTCACTGCCAATCCCCCGTGGTTTGAAAGAAGATACTACTTTGTACTCAAGTAGGTTTGTTCCAGAATACCTTGAGCAGAAAAAAGTTCAGAAACTTTTATTGGTTGGACTAGAAGGCTCTGGATCCAGCACAATCTTTAAGCAGGCAAAATTCTTGTATGGAACTGAATTCTCCCCAGAAGAAATACTTAATTTGAAGCTCATGATACAAAGCAATGTTTACAAATACCTCAGCACATTGCTTGAATGGCGGGAGTGCTTTGAGGACGAGGCTTTGGAGGAAGAAAAAGAGCTTGGCATGAGTAATCACAAGGGAGATGGGGAACCGAAGGCAGTGCAGAGCACGTCATCTTTGTATTCACTAAATCAAAGATTGATGCACTTTGCTAATTGGTTGCTGGAGATAGTTGCCCTGGGTAACCTTGATGCCTTTTTTCCTGCTGCAACTCGCGAGTATGCACCTATCGTTGAAGAGGTTTGGAAAGATCCAGCTATTCAAGCCACATATAAAAGGAAAAATGAGTTGCACTTTCTTCCTGATGTCGCCAGTTATTTTCTTGATAGGGTGGTTGAAATATCCAGCAATGAATATGAACCAACCGAGACAGATATCTTGTATGCAGAGGGTGTAAACCAATGGAATGGCCTCTCTACACTTGAATTCTCGCTTGATGACCGAGGTCCCCTCTCTGACTCATACGCTGACAAAGCTGGCAATCCAGCCATACAAACAAAGTATCAACTGATCCGCATGAACTCCAAGGGGCTAACTGGAGGCTTCAAGTGCCTCGGGATGCTGGAGGACATCCGTGCCATAATCTTCTGCATCTCGCTTGCGGACTACGACCAAACATGGGTGCAGAGCTCAGGAGAACCCTGCAACAAGATGATCGCCAGCCGGGATTTGTTTGAGGATGTGATCAGGCACCCTTCCTTTGAGGACACCCCCTGTGTACTCCTCCTCAACAAGTACGACGCCTTCGAGGAGAAGATCAGTAGGGTGCCACTGACAGTGTGCGAGTGGTTCGCTGACTTCAGCCCCGTCAGGCCTCACCACACCAGCCAGACATCGCTGGCCAGCCACGCCTACTACTACGTCGCCGTGAAGTTTAAGGACCTCTACTCCTCCGTCGCTGATGGCCGGAAGCTGTTTGTGTTCCAGACGAAGGCGCTGGAGCGGCGAACCGTCGACGACGCCTTCAGGTACATCCGGGAGGTGCTGAGATGGGATGACGTGAAGAACAGCGATGCCGGCTATTGCAGCGCTGACGAGTCCTCGTACAGTGTGGACATGACGACCTCTCCATCCTAATCGCTGTTTATCAGTTACCATCTGGTGAGATGTTTTGCTGTGGTTAGAAGATATTGGAGGTATTTATACCTCTTTACTTGATTACTTCTAGTATCTCCAATCACCATAAAACATCTCTGCATCAATAGTAGTTGCGTTTAGGGGCCTAGTCTTTTCATGTTTGCCTTGTAGTAGATATGTTTTCTTGAAATATTTGCACCCTTTTGTTGAACCTGCTGTAGTTTTCTGTTTAATTAGTAGCCTTATTCTTCCTGTAAGTAAATAGAGGAGTAATCTCCTGCGTATAACGACACCGTT]

[+] EMBL AK108670             [TTTCTCACTGCCAATCCCCCGTGGTTTGAAAGAAGATACTACTTTGTACTCAAGTAGGTTTGTTCCAGAATACCTTGAGCAGAAAAAAGTTCAGAAACTTTTATTGGTTGGACTAGAAGGCTCTGGATCCAGCACAATCTTTAAGCAGGCAAAATTCTTGTATGGAACTGAATTCTCCCCAGAAGAAATACTTAATTTGAAGCTCATGATACAAAGCAATGTTTACAAATACCTCAGCACATTGCTTGAATGGCGGGAGTGCTTTGAGGACGAGGCTTTGGAGGAAGAAAAAGAGCTTGGCATGAGTAATCACAAGGGAGATGGGGAACCGAAGGCAGTGCAGAGCACGTCATCTTTGTATTCACTAAATCAAAGATTGATGCACTTTGCTAATTGGTTGCTGGAGATAGTTGCCCTGGGTAACCTTGATGCCTTTTTTCCTGCTGCAACTCGCGAGTATGCACCTATCGTTGAAGAGGTTTGGAAAGATCCAGCTATTCAAGCCACATATAAAAGGAAAAATGAGTTGCACTTTCTTCCTGATGTCGCCAGTTATTTTCTTGATAGGGTGGTTGAAATATCCAGCAATGAATATGAACCAACCGAGACAGATATCTTGTATGCAGAGGGTGTAAACCAATGGAATGGCCTCTCTACACTTGAATTCTCGCTTGATGACCGAGGTCCCCTCTCTGACTCATACGCTGACAAAGCTGGCAATCCAGCCATACAAACAAAGTATCAACTGATCCGCATGAACTCCAAGGGGCTAACTGGAGGCTTCAAGTGCCTCGGGATGCTGGAGGACATCCGTGCCATAATCTTCTGCATCTCGCTTGCGGACTACGACCAAACATGGGTGCAGAGCTCAGGAGAACCCTGCAACAAGATGATCGCCAGCCGGGATTTGTTTGAGGATGTGATCAGGCACCCTTCCTTTGAGGACACCCCCTGTGTACTCCTCCTCAACAAGTACGACGCCTTCGAGGAGAAGATCAGTAGGGTGCCACTGACAGTGTGCGAGTGGTTCGCTGACTTCAGCCCCGTCAGGCCTCACCACACCAGCCAGACATCGCTGGCCAGCCACGCCTACTACTACGTCGCCGTGAAGTTTAAGGACCTCTACTCCTCCGTCGCTGATGGCCGGAAGCTGTTTGTGTTCCAGACGAAGGCGCTGGAGCGGCGAACCGTCGACGACGCCTTCAGGTACATCCGGGAGGTGCTGAGATGGGATGACGTGAAGAACAGCGATGCCGGCTATTGCAGCGCTGACGAGTCCTCGTACAGTGTGGACATGACGACCTCTCCATCCTAATCGCTGTTTATCAGTTACCATCTGGTGAGATGTTTTGCTGTGGTTAGAAGATATTGGAGGTATTTATACCTCTTTACTTGATTACTTCTAGTATCTCCAATCACCATAAAACATCTCTGCATCAATAGTAGTTGCGTTTAGGGGCCTAGTCTTTTCATGTTTGCCTTGTAGTAGATATGTTTTCTTGAAATATTTGCACCCTTTTGTTGAACCTGCTGTAGTTTTCTGTTTAATTAGTAGCCTTATTCTTCCTGTAAGTAAATAGAGGAGTAATCTCCTGCGTATAACGACACCGTT]


>consensus_1524#1 TTTCTCACTGCCAATCCCCCGTGGTTTGAAAGAAGATACTACTTTGTACTCAAGTAGGTT TGTTCCAGAATACCTTGAGCAGAAAAAAGTTCAGAAACTTTTATTGGTTGGACTAGAAGG CTCTGGATCCAGCACAATCTTTAAGCAGGCAAAATTCTTGTATGGAACTGAATTCTCCCC AGAAGAAATACTTAATTTGAAGCTCATGATACAAAGCAATGTTTACAAATACCTCAGCAC ATTGCTTGAATGGCGGGAGTGCTTTGAGGACGAGGCTTTGGAGGAAGAAAAAGAGCTTGG CATGAGTAATCACAAGGGAGATGGGGAACCGAAGGCAGTGCAGAGCACGTCATCTTTGTA TTCACTAAATCAAAGATTGATGCACTTTGCTAATTGGTTGCTGGAGATAGTTGCCCTGGG TAACCTTGATGCCTTTTTTCCTGCTGCAACTCGCGAGTATGCACCTATCGTTGAAGAGGT TTGGAAAGATCCAGCTATTCAAGCCACATATAAAAGGAAAAATGAGTTGCACTTTCTTCC TGATGTCGCCAGTTATTTTCTTGATAGGGTGGTTGAAATATCCAGCAATGAATATGAACC AACCGAGACAGATATCTTGTATGCAGAGGGTGTAAACCAATGGAATGGCCTCTCTACACT TGAATTCTCGCTTGATGACCGAGGTCCCCTCTCTGACTCATACGCTGACAAAGCTGGCAA TCCAGCCATACAAACAAAGTATCAACTGATCCGCATGAACTCCAAGGGGCTAACTGGAGG CTTCAAGTGCCTCGGGATGCTGGAGGACATCCGTGCCATAATCTTCTGCATCTCGCTTGC GGACTACGACCAAACATGGGTGCAGAGCTCAGGAGAACCCTGCAACAAGATGATCGCCAG CCGGGATTTGTTTGAGGATGTGATCAGGCACCCTTCCTTTGAGGACACCCCCTGTGTACT CCTCCTCAACAAGTACGACGCCTTCGAGGAGAAGATCAGTAGGGTGCCACTGACAGTGTG CGAGTGGTTCGCTGACTTCAGCCCCGTCAGGCCTCACCACACCAGCCAGACATCGCTGGC CAGCCACGCCTACTACTACGTCGCCGTGAAGTTTAAGGACCTCTACTCCTCCGTCGCTGA TGGCCGGAAGCTGTTTGTGTTCCAGACGAAGGCGCTGGAGCGGCGAACCGTCGACGACGC CTTCAGGTACATCCGGGAGGTGCTGAGATGGGATGACGTGAAGAACAGCGATGCCGGCTA TTGCAGCGCTGACGAGTCCTCGTACAGTGTGGACATGACGACCTCTCCATCCTAATCGCT GTTTATCAGTTACCATCTGGTGAGATGTTTTGCTGTGGTTAGAAGATATTGGAGGTATTT ATACCTCTTTACTTGATTACTTCTAGTATCTCCAATCACCATAAAACATCTCTGCATCAA TAGTAGTTGCGTTTAGGGGCCTAGTCTTTTCATGTTTGCCTTGTAGTAGATATGTTTTCT TGAAATATTTGCACCCTTTTGTTGAACCTGCTGTAGTTTTCTGTTTAATTAGTAGCCTTA TTCTTCCTGTAAGTAAATAGAGGAGTAATCTCCTGCGTATAACGACACCGTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1524#0      TTACCGGTTACCACAAAGGGTACTCTTTGATTTCTATAGAAAAAACACG--ATATTCAAA 58
consensus_1524#1      ------TTTCTCACTGCCAATCCCCCGTGGTTTGAAAGAAGATACTACTTTGTACTCAAG 54
                             **  ***      * * *  ** ***  *   * * *  **    ** **** 

consensus_1524#0      TTGTTATTAGCTTTTCAAGGCATATTTACCTGAAAAACTGCAGCAAACTTTTCATTACTT 118
consensus_1524#1      TAGGTTT----GTTCCAGAATACCTTGAGCAGAAAAAAGTTCAGAAACTTTT-------- 102
                      * * * *     ** **    *  ** * * ******       ********        

consensus_1524#0      ATTGACTAGTATGTAATGCCCTGTTAGATATATTGGACCACCAAATTGTCTAGACACATC 178
consensus_1524#1      ATTGGTTGGACTAGAAGGCTCTG-----------GATCCAGCACAATCTTTAAGCAGGCA 151
                      ****  * *  *  ** ** ***           *  *** ** * * * **  **    

consensus_1524#0      AATTTCTGTAAACTGATGCTGGACTGGGTTAGAGATTTTGAGGCCATGAAAACTTGCTCT 238
consensus_1524#1      AAATTCTT-------GTATGGAACTGAATTC----TCCCCAGA--AGAAATACTTAATTT 198
                      ** ****         *   * ****  **     *    **   *  ** ****  * *

consensus_1524#0      TGT-TTTATGAAACAGTGGGCCATGTTAGTTGTACTGGCTATTTATTACTTAATAAAATA 297
consensus_1524#1      GAAGCTCATGATACAA--AGCAATGTTTACAAATACCTCAGCACATTGCTTGA------- 249
                           * **** ***    ** *****           *     *** *** *       

consensus_1524#0      AACAGTGACAACATTATTGTTCTTCTATTCCTGTGCATGTTGCCAAATGTTTTTTGAAAT 357
consensus_1524#1      ----ATGGCGGGAGTGCTTTGAGGACGAGGCTTTGGAGGAAGAAAAA---------GAGC 296
                           ** *   * *  * *          ** ** * *  *  ***          *  

consensus_1524#0      TCAGAAAATGTTACAGAATGTGAACTTCCAACAGGGGAACCGAAGGCAGTGCAGAGCACG 417
consensus_1524#1      TTGGCATGAGTAATCACAAGGGAGAT-------GGGGAACCGAAGGCAGTGCAGAGCACG 349
                      *  * *   ** *    * * **  *       ***************************

consensus_1524#0      TCATCTTTGTATTCACTAAATCAAAGATTGATGCACTTTGCTAATTGGTTGCTGGAGATA 477
consensus_1524#1      TCATCTTTGTATTCACTAAATCAAAGATTGATGCACTTTGCTAATTGGTTGCTGGAGATA 409
                      ************************************************************

consensus_1524#0      GTTGCCCTGGGTAACCTTGATGCCTTTTTTCCTGCTGCAACTCGCGAGTATGCACCTATC 537
consensus_1524#1      GTTGCCCTGGGTAACCTTGATGCCTTTTTTCCTGCTGCAACTCGCGAGTATGCACCTATC 469
                      ************************************************************

consensus_1524#0      GTTGAAGAGGTTTGGAAAGATCCAGCTATTCAAGCCACATATAAAAGGAAAAATGAGTTG 597
consensus_1524#1      GTTGAAGAGGTTTGGAAAGATCCAGCTATTCAAGCCACATATAAAAGGAAAAATGAGTTG 529
                      ************************************************************

consensus_1524#0      CACTTTCTTCCTGATGTCGCCAGTTATTTTCTTGATAGGGTGGTTGAAATATCCAGCAAT 657
consensus_1524#1      CACTTTCTTCCTGATGTCGCCAGTTATTTTCTTGATAGGGTGGTTGAAATATCCAGCAAT 589
                      ************************************************************

consensus_1524#0      GAATATGAACCAACCGAGACAGATATCTTGTATGCAGAGGGTGTAAACCAATGGAATGGC 717
consensus_1524#1      GAATATGAACCAACCGAGACAGATATCTTGTATGCAGAGGGTGTAAACCAATGGAATGGC 649
                      ************************************************************

consensus_1524#0      CTCTCTACACTTGAATTCTCGCTTGATGACCGAGGTCCCCTCTCTGACTCATACGCTGAC 777
consensus_1524#1      CTCTCTACACTTGAATTCTCGCTTGATGACCGAGGTCCCCTCTCTGACTCATACGCTGAC 709
                      ************************************************************

consensus_1524#0      AAAGCTGGCAATCCAGCCATACAAACAAAGTATCAACTGATCCGCATGAACTCCAAGGGG 837
consensus_1524#1      AAAGCTGGCAATCCAGCCATACAAACAAAGTATCAACTGATCCGCATGAACTCCAAGGGG 769
                      ************************************************************

consensus_1524#0      CTAACTGGAGGCTTCAAGTGCCTCGGGATGCTGGAGGACATCCGTGCCATAATCTTCTGC 897
consensus_1524#1      CTAACTGGAGGCTTCAAGTGCCTCGGGATGCTGGAGGACATCCGTGCCATAATCTTCTGC 829
                      ************************************************************

consensus_1524#0      ATCTCGCTTGCGGACTACGACCAAACATGGGTGCAGAGCTCAGGAGAACCCTGCAACAAG 957
consensus_1524#1      ATCTCGCTTGCGGACTACGACCAAACATGGGTGCAGAGCTCAGGAGAACCCTGCAACAAG 889
                      ************************************************************

consensus_1524#0      ATGATCGCCAGCCGGGATTTGTTTGAGGATGTGATCAGGCACCCTTCCTTTGAGGACACC 1017
consensus_1524#1      ATGATCGCCAGCCGGGATTTGTTTGAGGATGTGATCAGGCACCCTTCCTTTGAGGACACC 949
                      ************************************************************

consensus_1524#0      CCCTGTGTACTCCTCCTCAACAAGTACGACGCCTTCGAGGAGAAGATCAGTAGGGTGCCA 1077
consensus_1524#1      CCCTGTGTACTCCTCCTCAACAAGTACGACGCCTTCGAGGAGAAGATCAGTAGGGTGCCA 1009
                      ************************************************************

consensus_1524#0      CTGACAGTGTGCGAGTGGTTCGCTGACTTCAGCCCCGTCAGGCCTCACCACACCAGCCAG 1137
consensus_1524#1      CTGACAGTGTGCGAGTGGTTCGCTGACTTCAGCCCCGTCAGGCCTCACCACACCAGCCAG 1069
                      ************************************************************

consensus_1524#0      ACATCGCTGGCCAGCCACGCCTACTACTACGTCGCCGTGAAGTTTAAGGACCTCTACTCC 1197
consensus_1524#1      ACATCGCTGGCCAGCCACGCCTACTACTACGTCGCCGTGAAGTTTAAGGACCTCTACTCC 1129
                      ************************************************************

consensus_1524#0      TCCGTCGCTGATGGCCGGAAGCTGTTTGTGTTCCAGACGAAGGCGCTGGAGCGGCGAACC 1257
consensus_1524#1      TCCGTCGCTGATGGCCGGAAGCTGTTTGTGTTCCAGACGAAGGCGCTGGAGCGGCGAACC 1189
                      ************************************************************

consensus_1524#0      GTCGACGACGCCTTCAGGTACATCCGGGAGGTGCTGAGATGGGATGACGTGAAGAACAGC 1317
consensus_1524#1      GTCGACGACGCCTTCAGGTACATCCGGGAGGTGCTGAGATGGGATGACGTGAAGAACAGC 1249
                      ************************************************************

consensus_1524#0      GATGCCGGCTATTGCAGCGCTGACGAGTCCTCGTACAGTGTGGACATGACGACCTCTCCA 1377
consensus_1524#1      GATGCCGGCTATTGCAGCGCTGACGAGTCCTCGTACAGTGTGGACATGACGACCTCTCCA 1309
                      ************************************************************

consensus_1524#0      TCCTAATCGCTGTTTATCAGTTACCATCTGGTGAGATGTTTTGCTGTGGTTAGAAGATAT 1437
consensus_1524#1      TCCTAATCGCTGTTTATCAGTTACCATCTGGTGAGATGTTTTGCTGTGGTTAGAAGATAT 1369
                      ************************************************************

consensus_1524#0      TGGAGGTATTTATACCTCTTTACTTGATTACTTCTAGTATCTCCAATCACCATAAAACAT 1497
consensus_1524#1      TGGAGGTATTTATACCTCTTTACTTGATTACTTCTAGTATCTCCAATCACCATAAAACAT 1429
                      ************************************************************

consensus_1524#0      CTCTGCATCAATAGTAGTTGCGTTTAGGGGCCTAGTCTTTTCATGTTTGCCTTGTAGTAG 1557
consensus_1524#1      CTCTGCATCAATAGTAGTTGCGTTTAGGGGCCTAGTCTTTTCATGTTTGCCTTGTAGTAG 1489
                      ************************************************************

consensus_1524#0      ATATGTTTTCTTGAAATATTTGCACCCTTTTGTTGAACCTGCTGTAGTTTTCTGTTTAAT 1617
consensus_1524#1      ATATGTTTTCTTGAAATATTTGCACCCTTTTGTTGAACCTGCTGTAGTTTTCTGTTTAAT 1549
                      ************************************************************

consensus_1524#0      TAGTAGCCTTATTCTTCCTGTAAGTAAATAGAGGAGTAATCTCCTGCGTATAACGACACC 1677
consensus_1524#1      TAGTAGCCTTATTCTTCCTGTAAGTAAATAGAGGAGTAATCTCCTGCGTATAACGACACC 1609
                      ************************************************************

consensus_1524#0      GTTTCTATCTGTTAGCGTTGTTCTCCCTATAAATGGAGAGGATGAATTTTATTTTGCATT 1737
consensus_1524#1      GTT--------------------------------------------------------- 1612
                      ***                                                         

consensus_1524#0      CTATATTTCTATCTCGTTTGTGTTTGTGCTTATTCTTGATGCAAAGTCACCAATGTGAAA 1797
consensus_1524#1      ------------------------------------------------------------
                                                                                  

consensus_1524#0      AAAAAGGTAAAGTGTTTTACTTAATTTGTCTGGAACGCAAGTCTTGCTGATTTCACTTTT 1857
consensus_1524#1      ------------------------------------------------------------
                                                                                  

consensus_1524#0      GTTCACTTTAGAGATTTGTTTCCCCAAGATATGCTTAGGACATAATACAAGCAGCTGCAA 1917
consensus_1524#1      ------------------------------------------------------------
                                                                                  

consensus_1524#0      AGTACACCCTTACTACATTTATAAATTGATGAAAGCCACACATAGATCAGAACAATCTGT 1977
consensus_1524#1      ------------------------------------------------------------
                                                                                  

consensus_1524#0      GTACCTGACAAAGTCCTTGTTGGAGCTTACTCGTATGTACAAACATGTACATTTATCATG 2037
consensus_1524#1      ------------------------------------------------------------
                                                                                  

consensus_1524#0      TTAATGTTGCCTGTTCAGATGAAATAACTGTGATGTTTTGTCCCTTTTTCTCTGAGAGGA 2097
consensus_1524#1      ------------------------------------------------------------
                                                                                  

consensus_1524#0      AAATGAATGAAAACAACTATACTCTAATTTGAAATTTGGGAAAAGAAAAGGACATCGCCT 2157
consensus_1524#1      ------------------------------------------------------------
                                                                                  

consensus_1524#0      TCTATCTTACTTCAATGCTTAGTAACATAGGTACTGATGTAAGTATAAACCATTACTTGT 2217
consensus_1524#1      ------------------------------------------------------------
                                                                                  

consensus_1524#0      AATAATCTCTGTTAGTCGCGTGGGTTAATCCTGTCCGCCTCCCACGCGCGAAGCCACGCC 2277
consensus_1524#1      ------------------------------------------------------------
                                                                                  

consensus_1524#0      GCCACGTCGCCGGCGGCGAGCGACCGCGCCGCCGCGTACACACCGTCGCTGTCACGATGG 2337
consensus_1524#1      ------------------------------------------------------------
                                                                                  

consensus_1524#0      CGACGCCAGTAGCGGCGCCGCTCGACCGCGTGAGCGATGTGGCATCCGACCACGACGGCG 2397
consensus_1524#1      ------------------------------------------------------------
                                                                                  

consensus_1524#0      CCGACGAAGACGGCCTTGCCGCTCAACGCCGCCGCCGTGTGGCTGATGGCCGACGCCTCC 2457
consensus_1524#1      ------------------------------------------------------------
                                                                                  

consensus_1524#0      GCCGGCGGGAGGGGCGCCACGGCCACCTCCTCCGTCATCGCCACCAGCAAGTCCGTCACC 2517
consensus_1524#1      ------------------------------------------------------------
                                                                                  

consensus_1524#0      GTGATCCCACCGGTGACGGTCACGAGAGCTCGCCGCCGGCCGCCGCTCGCACGGCGGCGC 2577
consensus_1524#1      ------------------------------------------------------------
                                                                                  

consensus_1524#0      GGGAAGCCACGCCGGCGACCCTGCCCACCACAGCCTGCGTCTACGTATGTACTATGAGTA 2637
consensus_1524#1      ------------------------------------------------------------
                                                                                  

consensus_1524#0      CAAGATGGAGACGTATGTGACATTGGGGGTGACCGTATGCATGTATGCATATGTTGCTGA 2697
consensus_1524#1      ------------------------------------------------------------
                                                                                  

consensus_1524#0      CTTAAAACTTGGCCACGACTATGATCTTGTAATTTGTAAACATGGAAATATTATTACACA 2757
consensus_1524#1      ------------------------------------------------------------
                                                                                  

consensus_1524#0      ATGGTAATATATTTGTTCCTAATT 2781
consensus_1524#1      ------------------------
                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)