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Oryza sativa
cluster # 15242 cluster # 15242       Sequences # 20       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15242#0 length = 925 sequences # 12  
consensus_15242#1 length = 689 sequences # 3  
consensus_15242#2 length = 530 sequences # 1  
consensus_15242#3 length = 430 sequences # 1  
consensus_15242#4 length = 425 sequences # 1  
consensus_15242#5 length = 383 sequences # 1  
consensus_15242#6 length = 225 sequences # 1  

consensusID : consensus_15242#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 925
fasta sequence
                              [TAATCCTCGCACCCCCCAACACCTCTCTTCTCCTGCGCCGCCGCCGCCTCCTCCTCCTCCCGCATCTCCCTCCTCGCCTCTCGCTGCCGGCCGCGC-TTCGCCAAGATGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGC-TTCCA-TCGCCGCAAACACATGGGTGGTCAGTGGCTCCCCACAGACCAAG-AAGCTTCAAGATGTTCTTCCT-GGGATCATTAACCAATT-GGGTCCTGACAAC-ATGGA-GCA-CCTAAAGA-GGATTGCTGAAG-AGATGCAG-AAGCAGGTAGCTGCTGCAGGTGCCACTG-CCCAGGCAAAGGAAGAGAA-CGATGATGATGTT-CCAGAGCTTGTTCCGGGAGAGAATTTCGAAGAGGTAGCTCAGGAGACAAAAGCCTGATCATAGATACCACAAGTAGTGAAATGTTACTTGACCGCTGTTCTGAGGTCATGGTTTTCTATGACGGCCCTGTTTTGCTTCTCCTCGTAGGCCAATCTTTGTATTTGCAATTGGAAACTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATGCTGAGATGCCATGGAGTCCTTTTTACCTGGTTTTGATGTTCACATTTCTGGTTGGTTCAGAATATACTAGCATCAGGGTTTGCAGATGTCCTTCACGTCTCAACTATCTACTAGTATCATTTATGTTTGGAGATATCCTGCAATGGTACAGTGTTGATTTTTCCCCAAATGAAAAATAATGATGTGTT]

[+] EMBL AK060496             [TAATCCTCGCACCCCCCAACACCTCTCTTCTCCTGCGCCGCCGCCGCCTCCTCCTCCTCCCGCATCTCCCTCCTCGCCTCTCGCTGCCGGCCGCGC TTCGCCAAGATGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGC TTCCA TCGCCGCAAACACATGGGTGGTCAGTGGCTCCCCACAGACCAAG AAGCTTCAAGATGTTCTTCCT GGGATCATTAACCAATT GGGTCCTGACAAC ATGGA GCA CCTAAAGA GGATTGCTGAAG AGATGCAG AAGCAGGTAGCTGCTGCAGGTGCCACTG CCCAGGCAAAGGAAGAGAA CGATGATGATGTT CCAGAGCTTGTTCCGGGAGAGAATTTCGAAGAGGTAGCTCAGGAGACAAAAGCCTGATCATAGATACCACAAGTAGTGAAATGTTACTTGACCGCTGTTCTGAGGTCATGGTTTTCTATGACGGCCCTGTTTTGCTTCTCCTCGTAGGCCAATCTTTGTATTTGCAATTGGAAACTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATGCTGAGATGCCATGGAGTCCTTTTTACCTGGTTTTGATGTTCACATTTCTGGTTGGTTCAGAATATACTAGCATCAGGGTTTGCAGATGTCCTTCACGTCTCAACTATCTACTAGTATCATTTATGTTTGGAGATATCCTGCAATGGTACAGTGTTGATTTTTCCCCAAATGAAAAATAATGATGTGTT]
[+] EMBL AK102202             [                         TCTTCTCCTGCGCCGCCGCCGCCTCCTCCTCCTCCCGCATCTCCCTCCTCGCCTCTCGCTGCCGGCCGCGC TTCGCCAAGATGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGC TTCCA TCGCCGCAAACACATGGGTGGTCAGTGGCTCCCCACAGACCAAG AAGCTTCAAGATGTTCTTCCT GGGATCATTAACCAATT GGGTCCTGACAAC ATGGA GCA CCTAAAGA GGATTGCTGAAG AGATGCAG AAGCAGGTAGCTGCTGCAGGTGCCACTG CCCAGGCAAAGGAAGAGAA CGATGATGATGTT CCAGAGCTTGTTCCGGGAGAGAATTTCGAAGAGGTAGCTCAGGAGACAAAAGCCTGATCATAGATACCACAAGTAGTGAAATGTTACTTGACCGCTGTTCTGAGGTCATGGTTTTCTATGACGGCCCTGTTTTGCTTCTCCTCGTAGGCCAATCTTTGTATTTGCAATTGGAAACTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATGCTGAGGTGCCATGGGGTCCTTTTTACCTGGTTTTGATGTTCACATTTCTGGTTGGTTCAGAATATACTAGCAT                                                                                                                   ]
[+] EMBL AU069642             [                                        CCGCCGCCTCCTCCTCCTCCCGCATCTCCCTCCTCGCCTCTNGCTGCCGGCCGCGC TTCGCCAAGATGAACAAGGAGAGGCTTATNAAGATGGCCGGCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGNGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGT TTCCA TCGCCGCAAACACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK104157             [                                         CGCCGCCTCCTCCTCCTCCCGCATCTCCCTCCTCGCCTCTCGCTGCCGGCCGCGC TTCGCCAAGATGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGC TTCCA TCGCCGCAAACACATGGGTGGTCAGTGGCTCCCCACAGACCAAG AAGCTTCAAGATGTTCTTCCT GGGATCATTAACCAATT GGGTCCTGACAAC ATGGA GCA CCTAAAGA GGATTGCTGAAG AGATGCAG AAGCAGGTAGCTGCTGCAGGTGCCACTG CCCAGGCAAAGGAAGAGAA CGATGATGATGTT CCAGAGCTTGTTCCGGGAGAGAATTTCGAAGAGGTAGCTCAGGAGACAAAAGCCTGATCATAGATACCACAAGTAGTGAAATGTTACTTGACCGCTGTTCTGAGGTCATGGTTTTCTATGACGGCCCTGTTTTGCTTCTCCTCGTAGGCCAATCTTTGTATTTGCAATTGGAAACTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATGCTGAGATGCCATGGAGTCCTTTTTACCTGGTTTTGATGTTCACATTTCTGGTTGGTTCAGAATATACTAGCATCAGGGTTTGCAGATGTCCTTCACGTCTCAACTATCTACTAGTATCATTTATGTTTGGAGATATCCTGCAATGGTACAGTGTTGATTTTTCCCCAAATGAAAAATAATGATGTGTT]
[+] EMBL C74280               [                                              CCTCCTCCTCCTCCCGCATCTCCCTCCTCGCCTCTCGCTGCCGGCCGCGC TTCGCCAAGATGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCGCACNGGCGGGAAAGGCACCGTGCGCAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGCTTTCCATTCGCCGCAAACACATGGGTGGTCAGTGGCTCCCCACAGACCAAGAAAGCTTCAAGATGTTCTTCCT GGGATCATTAACCAATT GGGT CTGACAAC ATGGA GNN CCT AAGA GGATTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSC00201             [                                                      nCCTCCCGCATCTCCCTCCTCGCCTCTCGCTGCCGGCCGCGC TTCGCCAAGATGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGNAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGC TTCCA TCGGCGGANACACATGGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C97858               [                                                       ctTCCCGGATCTCCTTCTTCGCNTCTCGTTGCCGGCC CGCNTTCGCCAAGATGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGC TTCCA TCGCCGCAAACACATGGGTGGTCAGTGGCTCCCCACAGACCAAG AAGCTTCAAGATGTTCTTCCT GGGATCATTAACCAATT GGGTCCTGACAAC ATGGA GCA CCTAAAGA GGATTGCTGAAG AGATGCAG AAGCAGGTAGCTGCTGCAGGTGCCACTG CCCAGGCAAAGGAAGAGAA CGATGATGATGTT CCAGAGCTTGTTCCGGGAGAGAATTTCGAAGAGGTAGCTCAGGAGACAAAAGCCTGATCATAGATACCACAAGTAGTGAAATGTTACTTGACCGCTGTTCTGAGGTCATGGTTTTCTATGACGGCCCTGTTTTGCTTCTCCTCGTAGGCCAATCTTTGTATTTGCAATTGGAAACTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATGCTGAGATGCCATGGAGTCCTTTTTACCTGGTTTTGATGTTCACATTTCTGGTTGGTTCAGAA                                                                                                                              ]
[+] EMBL OSC2411              [                                                                              TCTCGCTGCCGGCCGCGC TTCG CAAGATGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCGCACC GCGGANAAGGCACCGTGCGCAGGAAGAAGAAGGCCGTCCACAAGAC GGGACCACTGACGACAAGAGGCTGCAGAG ACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGC TTCCA TCGCCGCAAACACATNGGTGGTCAGTGGCTCCCCACAGACCAAG AAGCTTCAAGATGTTCTTCCTGGGGATCATTAACCAATTNGGGTCCTGACAAC ATNGAGGCA CCTAAAGAGGGATTNCTGAAG AGATGCAG AAGCAGGTAGCTTCTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OSC12831             [                                                                                   CTGCCGGCCGCGC TTCGCCAAGATGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGC TTCCA TCGCCGCAAACACATGGGTGGTCAGTGGCTCCCCACAGACCAAG AAGCTTCAAGATGTTCTTCCT GGGATCATTAACCAATT GGGTCCTGACAAC ATGGA GCA CCTAAAGA GGATTGCTGAAG AGATGCAG AAGCAGGTAGCT CTGCAGGTGCCACTG  CCAGG AAAG                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL D42234               [                                                                                                                                                                                     AAGACCGTCCACAAGA  GCGACCACTGACGACAAGAGGCTGCAGAG ACCCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCAT CAGTTCGTCAATCCCAAAGTGCAAGC TTCCA TCGCCGCAAACACAT GGTGGTCAGTGGCTCCCCACAGACCAAG AAGCTTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU069686             [                                                                                                                                                                                                                                                                                                                                   TGCAAGC TTCCA TCGCCGCAAACACATGGGTGGTCAGTGGCTCCCCACAGACCAAG AAGCTTCAAGATGTTCTTCCT GGGATCATTAACCAATT GGGTCCTGACAAC ATGGA GCA CCTAAAGA GGATTGCTGAAG AGATGCAG AAGCAGGTAGCTGCTGCAGGTGCCACTG CCCAGGCAAAGGAAGAGAA CGATGATGATGTT CCAGAGCTTGTTCCGGGAGAGAATTTCGAAGAGGTAGCTCAGGAGACAAAAGCCTGATCATAGATACCACAAGTAGTGAAATGTTACTTGACCGCTGTTCTGAGGTCATGGTTTTCTATGACGGCCCTGTTTTGCTTCTCCTCGTAGGCCAATCTTTGTATTTGCAATTGGAAACTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATGCTGAGATGCCATGGAGTCCTTTTTACC                                                                                                                                                                 ]
[+] EMBL D42855               [                                                                                                                                                                                                                                                                                                                                                                                                                                                AACAATGGA GCACCCTAAA A AGATTGCTGAAGAAGATGCAGAAAGAAGGTAGCTGCTGCAGGTGCCACTGCCCCAGGCAAAGGAAGAGAACCGATGATGATGTTCCCAGAGCTTGTTCCGGGAGAGAATTTCGAAGAGGTAGCTCAGGAGACAAAAGCCTGATCATAGATACCACAAGTAGTGAAATGTTACTTGACCGCTGTTCTGAGGTCATGGTTTTCTATGACGGCCCTGTTTTGCTTCTCCTCGTAGGCCAATCTTTGTATTTGCAATTGGAAACTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATGCTGAGATGCCATGGAGTCCTTTTTACCTGGTTTTGATGTTCACATTTCTGGTTGGTTCAG                                                                                                                                ]


>consensus_15242#0 TAATCCTCGCACCCCCCAACACCTCTCTTCTCCTGCGCCGCCGCCGCCTCCTCCTCCTCC CGCATCTCCCTCCTCGCCTCTCGCTGCCGGCCGCGCTTCGCCAAGATGAACAAGGAGAGG CTTATGAAGATGGCCGGCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGAAGAAG AAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGA GTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTC ATCCAGTTCGTCAATCCCAAAGTGCAAGCTTCCATCGCCGCAAACACATGGGTGGTCAGT GGCTCCCCACAGACCAAGAAGCTTCAAGATGTTCTTCCTGGGATCATTAACCAATTGGGT CCTGACAACATGGAGCACCTAAAGAGGATTGCTGAAGAGATGCAGAAGCAGGTAGCTGCT GCAGGTGCCACTGCCCAGGCAAAGGAAGAGAACGATGATGATGTTCCAGAGCTTGTTCCG GGAGAGAATTTCGAAGAGGTAGCTCAGGAGACAAAAGCCTGATCATAGATACCACAAGTA GTGAAATGTTACTTGACCGCTGTTCTGAGGTCATGGTTTTCTATGACGGCCCTGTTTTGC TTCTCCTCGTAGGCCAATCTTTGTATTTGCAATTGGAAACTTTTAGTTTCTCCGAGTTTT TACCTAAGTTATGAATGCTGAGATGCCATGGAGTCCTTTTTACCTGGTTTTGATGTTCAC ATTTCTGGTTGGTTCAGAATATACTAGCATCAGGGTTTGCAGATGTCCTTCACGTCTCAA CTATCTACTAGTATCATTTATGTTTGGAGATATCCTGCAATGGTACAGTGTTGATTTTTC CCCAAATGAAAAATAATGATGTGTT



consensusID : consensus_15242#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 689
fasta sequence
                              [GGAAAAGGCNCCGTGCGCAGGAAGAANAAGGCCGTCCACAAGACGGGGACCCCTGACGCCAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGCTTCCATCGCCGCAAACACATGGGTGGTCAGTGGCTCCCCACAGACCAAGAAGCTTCAAGATGTTCTTCCTGGGATCATTAACCAATTGGGTCCTGACAACATGGAGCACCTAAAGAGGATTGCTGAAGAGATGCAGAAGCAGGTAGCTGCTGCAGGTGCCACTGCCCAGGCAAAGGAAGAGAACGATGATGATGTTCCANAGCTTGTTCCGGGAGAGAATTTCGAAGAGGTAGCTCAGGAGACAAAAGCCTGATCATAGATACCNCAAGTAGTGAAATGTTACTTGACCGCTGTTCTGAGGTCATGGTTTTCTATGACGGCCCTGTTTTGCTTCTCCTCGTAGGCCAATCTTTGTATTTGCAATTGGAAACTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATGCTGANATGCCATGGAGTCCTTTTTACCTGGTTTTGATGTTCACATTTCTGGTTGGTTCAGAATATACTAGCATCAGGGTTTGCAGATAAAAAAAAAAAAAAAAAA]

[+] EMBL AU093191             [GGAAAAGGCNCCGTGCGCAGGAAGAANAAGGCCGTCCACAAGACGGGGACCCCTGACGCCAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGCTTCCATCGCCGCAAACACATGGGTGGTCAGTGGCTCCCCACAGACCAAGAAGCTTCAAGATGTTCTTCCTGGGATCATTAACCAATTGGGTCCTGACAACATGGAGCACCTAAAGAGGATTGCTGAAGAGATGCAGAAGCAGGTAGCTGCTGCAGGTGCCACTGCCCAGGCAAAGGAAGAGAACGATGATGATGTTCCANAGCTTGTTCCGGGAGAGAATTTCGAAGAGGTAGCTCAGGAGACAAAAGCCTGATCATAGATACCNCAAGTAGTGAAATGTTACTTGACCGCTGTTCTGAGGTCATGGTTTTCTATGACGGCCCTGTTTTGCTTCTCCTCGTAGGCCAATCTTTGTATTTGCAATTGGAAACTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATGCTGANATGCCATGGAGTCCTTTTTACCTGGTTTTGATGTTCACATTTCTGGTTGGTTCAGAATATACTAGCATCAGGGTTTGCAGAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU183959             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCAATTGGAAACTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATGCTGAGATGCCATGGAGTCCTTTTTACCTGGTTTTGATGTTCACATTTCTGGTTGGTTCAGAATATACTAGCATCAGGGTTTGCAGATAAAAA             ]
[+] EMBL AU182117             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCAATTGGAAACTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATGCTGANATGCCATGGAGTCCTTTTTNCCTGGTTTTNATGTTCACATTTCTGGTTGGTTCAGAATATACTAGCATCAGGGTTTGCAGATAAAAA             ]


>consensus_15242#1 GGAAAAGGCNCCGTGCGCAGGAAGAANAAGGCCGTCCACAAGACGGGGACCCCTGACGCC AAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAG GTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGCTTCC ATCGCCGCAAACACATGGGTGGTCAGTGGCTCCCCACAGACCAAGAAGCTTCAAGATGTT CTTCCTGGGATCATTAACCAATTGGGTCCTGACAACATGGAGCACCTAAAGAGGATTGCT GAAGAGATGCAGAAGCAGGTAGCTGCTGCAGGTGCCACTGCCCAGGCAAAGGAAGAGAAC GATGATGATGTTCCANAGCTTGTTCCGGGAGAGAATTTCGAAGAGGTAGCTCAGGAGACA AAAGCCTGATCATAGATACCNCAAGTAGTGAAATGTTACTTGACCGCTGTTCTGAGGTCA TGGTTTTCTATGACGGCCCTGTTTTGCTTCTCCTCGTAGGCCAATCTTTGTATTTGCAAT TGGAAACTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATGCTGANATGCCATGGAG TCCTTTTTACCTGGTTTTGATGTTCACATTTCTGGTTGGTTCAGAATATACTAGCATCAG GGTTTGCAGATAAAAAAAAAAAAAAAAAA



consensusID : consensus_15242#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 530
fasta sequence
                              [AAAGGATTGTTAAAAAAATGCAAAAGCGGGTAGTTGCTGCGGGTGCCCCCGCCCAGGAAAAGAAAAAGAAGGTTTATGTTGTTCCAGGGTTTGTTCCGGGAAAGATTTTGGAAAAGGTGGCTCAGGAGACAAAAGCCTGTTCATAAAACCCCCAAGTAGTGAAATGTTACTTGCCCGGTGTTTTGAGGTCAGGGTTTTTTATGAGGGCCCTGTTTTGTTTTTCCTGGTGGGCCATTTTTGGTATTTGCATTTGGAAATTTTTAGTTTTTCCGAGTTTTTCCATAAGTTATAAATGTTGAGATCCCATGGAGTCCTTTTTACCGGGTTTTGATGTTCCCATTTTGGGTTGGTTCAGAATATAGTAGCATCAGGGTTTTCAAATGTCCTTCAGGTTTCAATTATTTATTAGTATCATTTATGTTGGGAAAAATCCCGCAATGGCCCAGTGTTGATTTTTCCCCAAATGAAAAATAATGATGTGTTTAACCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF335036             [AAAGGATTGTTAAAAAAATGCAAAAGCGGGTAGTTGCTGCGGGTGCCCCCGCCCAGGAAAAGAAAAAGAAGGTTTATGTTGTTCCAGGGTTTGTTCCGGGAAAGATTTTGGAAAAGGTGGCTCAGGAGACAAAAGCCTGTTCATAAAACCCCCAAGTAGTGAAATGTTACTTGCCCGGTGTTTTGAGGTCAGGGTTTTTTATGAGGGCCCTGTTTTGTTTTTCCTGGTGGGCCATTTTTGGTATTTGCATTTGGAAATTTTTAGTTTTTCCGAGTTTTTCCATAAGTTATAAATGTTGAGATCCCATGGAGTCCTTTTTACCGGGTTTTGATGTTCCCATTTTGGGTTGGTTCAGAATATAGTAGCATCAGGGTTTTCAAATGTCCTTCAGGTTTCAATTATTTATTAGTATCATTTATGTTGGGAAAAATCCCGCAATGGCCCAGTGTTGATTTTTCCCCAAATGAAAAATAATGATGTGTTTAACCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_15242#2 AAAGGATTGTTAAAAAAATGCAAAAGCGGGTAGTTGCTGCGGGTGCCCCCGCCCAGGAAA AGAAAAAGAAGGTTTATGTTGTTCCAGGGTTTGTTCCGGGAAAGATTTTGGAAAAGGTGG CTCAGGAGACAAAAGCCTGTTCATAAAACCCCCAAGTAGTGAAATGTTACTTGCCCGGTG TTTTGAGGTCAGGGTTTTTTATGAGGGCCCTGTTTTGTTTTTCCTGGTGGGCCATTTTTG GTATTTGCATTTGGAAATTTTTAGTTTTTCCGAGTTTTTCCATAAGTTATAAATGTTGAG ATCCCATGGAGTCCTTTTTACCGGGTTTTGATGTTCCCATTTTGGGTTGGTTCAGAATAT AGTAGCATCAGGGTTTTCAAATGTCCTTCAGGTTTCAATTATTTATTAGTATCATTTATG TTGGGAAAAATCCCGCAATGGCCCAGTGTTGATTTTTCCCCAAATGAAAAATAATGATGT GTTTAACCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_15242#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 430
fasta sequence
                              [GCACCCCCCAACACCTCTCTTCTCCTGCGCCGCCGCCGCCTCCTCCTCCTCCCGCATCTCCCTCCTCGCCTCTCGCTGCCGGCCGCGCTTCGCCAAGATGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGTGGGTAAATCGCCTTTGTCGCGAAATGAAATGAATGTCTTGTTCTTTGCTTCTCGCCGTGTCGCGAAATGAAACAAATGTGCTTCATTTTGTTTGTTAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGCTTCCATCGC]

[+] EMBL CF335035             [GCACCCCCCAACACCTCTCTTCTCCTGCGCCGCCGCCGCCTCCTCCTCCTCCCGCATCTCCCTCCTCGCCTCTCGCTGCCGGCCGCGCTTCGCCAAGATGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGTGGGTAAATCGCCTTTGTCGCGAAATGAAATGAATGTCTTGTTCTTTGCTTCTCGCCGTGTCGCGAAATGAAACAAATGTGCTTCATTTTGTTTGTTAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGCTTCCATCGC]


>consensus_15242#3 GCACCCCCCAACACCTCTCTTCTCCTGCGCCGCCGCCGCCTCCTCCTCCTCCCGCATCTC CCTCCTCGCCTCTCGCTGCCGGCCGCGCTTCGCCAAGATGAACAAGGAGAGGCTTATGAA GATGGCCGGCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGTGGGTAAATCGCCT TTGTCGCGAAATGAAATGAATGTCTTGTTCTTTGCTTCTCGCCGTGTCGCGAAATGAAAC AAATGTGCTTCATTTTGTTTGTTAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTG ACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCG AGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAG CTTCCATCGC



consensusID : consensus_15242#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 425
fasta sequence
                              [TGGGTGGTCAGTGGCTCCCCACAGACCAAGAAGCTTCAAGATGTTCTTCCTGGGATCATTAACCAATTGGGTCCTGACAACATGGAGCACCTAAAGAGGATTGCTGAAGAGATGCAGAAGCAGGTAGCTGCTGCAGGTGCCACTGCCCAGGCAAAGGAAGAGAACGATGATGATGTTCCAGAGCTTGTTCCGGGAGAGAATTTCGAAGAGGTAGCTCAGGAGACAAAAGCCTGATCATAGATACCNCAAGTAGTGAAATGTTACTTGACCGCTGTTNTGAGGTCATGGTTTTNTATGACGGCCCTGTTTTGCTTCTCCTCGTAGGCCAATCTTTGTATTTGCAATTGGAAACTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATGCTGAGATGCCATGGAGTCCTTTTTAAAAAAAAAAAA]

[+] EMBL AU182155             [TGGGTGGTCAGTGGCTCCCCACAGACCAAGAAGCTTCAAGATGTTCTTCCTGGGATCATTAACCAATTGGGTCCTGACAACATGGAGCACCTAAAGAGGATTGCTGAAGAGATGCAGAAGCAGGTAGCTGCTGCAGGTGCCACTGCCCAGGCAAAGGAAGAGAACGATGATGATGTTCCAGAGCTTGTTCCGGGAGAGAATTTCGAAGAGGTAGCTCAGGAGACAAAAGCCTGATCATAGATACCNCAAGTAGTGAAATGTTACTTGACCGCTGTTNTGAGGTCATGGTTTTNTATGACGGCCCTGTTTTGCTTCTCCTCGTAGGCCAATCTTTGTATTTGCAATTGGAAACTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATGCTGAGATGCCATGGAGTCCTTTTTAAAAAAAAAAAA]


>consensus_15242#4 TGGGTGGTCAGTGGCTCCCCACAGACCAAGAAGCTTCAAGATGTTCTTCCTGGGATCATT AACCAATTGGGTCCTGACAACATGGAGCACCTAAAGAGGATTGCTGAAGAGATGCAGAAG CAGGTAGCTGCTGCAGGTGCCACTGCCCAGGCAAAGGAAGAGAACGATGATGATGTTCCA GAGCTTGTTCCGGGAGAGAATTTCGAAGAGGTAGCTCAGGAGACAAAAGCCTGATCATAG ATACCNCAAGTAGTGAAATGTTACTTGACCGCTGTTNTGAGGTCATGGTTTTNTATGACG GCCCTGTTTTGCTTCTCCTCGTAGGCCAATCTTTGTATTTGCAATTGGAAACTTTTAGTT TCTCCGAGTTTTTACCTAAGTTATGAATGCTGAGATGCCATGGAGTCCTTTTTAAAAAAA AAAAA



consensusID : consensus_15242#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 383
fasta sequence
                              [ACACCTCTCTTCTCCTGCGCCGCCGCCGCCTCCTCCTCCTCCCGCATCTCCCTCCTCGCCTCTCGCTGCCGGCCGCGCTTCGCCAAGATGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTTGCAAGTTTNCATCGNNTTTGGTTTCNGTTTTCCAGTTTGTTTTGATCCNTGGNTTTTCNGGTTTGGNAATTTTGGGG]

[+] EMBL OS0908A              [ACACCTCTCTTCTCCTGCGCCGCCGCCGCCTCCTCCTCCTCCCGCATCTCCCTCCTCGCCTCTCGCTGCCGGCCGCGCTTCGCCAAGATGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTTGCAAGTTTNCATCGNNTTTGGTTTCNGTTTTCCAGTTTGTTTTGATCCNTGGNTTTTCNGGTTTGGNAATTTTGGGG]


>consensus_15242#5 ACACCTCTCTTCTCCTGCGCCGCCGCCGCCTCCTCCTCCTCCCGCATCTCCCTCCTCGCC TCTCGCTGCCGGCCGCGCTTCGCCAAGATGAACAAGGAGAGGCTTATGAAGATGGCCGGC GCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGAAGAAGAAGGCCGTCCACAAGACG GGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATC CCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCC AAAGTTGCAAGTTTNCATCGNNTTTGGTTTCNGTTTTCCAGTTTGTTTTGATCCNTGGNT TTTCNGGTTTGGNAATTTTGGGG



consensusID : consensus_15242#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 225
fasta sequence
                              [CGTCTGCNCCNNCGACGCNGTCNTGCCTNNTTNCCCATCTCCCTCCTCGNCTCTCGCTGCCGGCCGCGCTTCGCCAAGATGAACAAGGAGAGGCTTATNAAGATGGCCGNCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGANCACGCTCAAGNGAGTAGGTGTCAAC]

[+] EMBL AU063678             [CGTCTGCNCCNNCGACGCNGTCNTGCCTNNTTNCCCATCTCCCTCCTCGNCTCTCGCTGCCGGCCGCGCTTCGCCAAGATGAACAAGGAGAGGCTTATNAAGATGGCCGNCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGANCACGCTCAAGNGAGTAGGTGTCAAC]


>consensus_15242#6 CGTCTGCNCCNNCGACGCNGTCNTGCCTNNTTNCCCATCTCCCTCCTCGNCTCTCGCTGC CGGCCGCGCTTCGCCAAGATGAACAAGGAGAGGCTTATNAAGATGGCCGNCGCCGTCCGC ACCGGCGGGAAAGGCACCGTGCGCAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACT GACGACAAGAGGCTGCAGANCACGCTCAAGNGAGTAGGTGTCAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15242#3      ------------------------------------------------------------
consensus_15242#6      ------------------------------------------------------------
consensus_15242#5      ------------------------------------------------------------
consensus_15242#0      ------------------------------------------------------------
consensus_15242#1      GGAAAAGGCNCCGTGCGCAGGAAGAANAAGGCCGTCCACAAGACGGGGACCCCTGACGCC 60
consensus_15242#4      ------------------------------------------------------------
consensus_15242#2      ------------------------------------------------------------
                                                                                   

consensus_15242#3      ------------------------------------------------------------
consensus_15242#6      ------------------------------------------------------------
consensus_15242#5      ------------------------------------------------------------
consensus_15242#0      ------------------------------------------------------------
consensus_15242#1      AAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAG 120
consensus_15242#4      ------------------------------------------------------------
consensus_15242#2      ------------------------------------------------------------
                                                                                   

consensus_15242#3      ------------------------------------------------------------
consensus_15242#6      ------------------------------------------------------------
consensus_15242#5      ------------------------------------------------------------
consensus_15242#0      ------------------------------------------------------------
consensus_15242#1      GTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGCTTCC 180
consensus_15242#4      ------------------------------------------------------------
consensus_15242#2      ------------------------------------------------------------
                                                                                   

consensus_15242#3      ------------------------------------------------------------
consensus_15242#6      ------------------------------------------------------------
consensus_15242#5      ------------------------------------------------------------
consensus_15242#0      ------------------------------------------------------------
consensus_15242#1      ATCGCCGCAAACACATGGGTGGTCAGTGGCTCCCCACAGACCAAGAAGCTTCAAGATGTT 240
consensus_15242#4      ---------------TGGGTGGTCAGTGGCTCCCCACAGACCAAGAAGCTTCAAGATGTT 45
consensus_15242#2      ------------------------------------------------------------
                                                                                   

consensus_15242#3      ----------------------------------------GCACCCCCCAACACCTCTCT 20
consensus_15242#6      ----------------------------------------------------------CG 2
consensus_15242#5      --------------------------------------------------ACACCTCTCT 10
consensus_15242#0      --------------------------------TAATCCTCGCACCCCCCAACACCTCTCT 28
consensus_15242#1      CTTCCTGGGATCATTAACCAATTGGGTCCTGACAACATGGAGCACCTAAAGAGGATTGCT 300
consensus_15242#4      CTTCCTGGGATCATTAACCAATTGGGTCCTGACAACATGGAGCACCTAAAGAGGATTGCT 105
consensus_15242#2      -------------------------------------------------AAAGGATTGTT 11
                                                                                   

consensus_15242#3      TCTCCTGCGCCGCCGCCGCCTCCTCCTCCTCCCGCATCTCCCTCCTCGCCTCTCGCTGCC 80
consensus_15242#6      TCTGCNCCNNCGACGCNGTCNTGCCTNNTTNCC-CATCTCCCTCCTCGNCTCTCGCTGCC 61
consensus_15242#5      TCTCCTGCGCCGCCGCCGCCTCCTCCTCCTCCCGCATCTCCCTCCTCGCCTCTCGCTGCC 70
consensus_15242#0      TCTCCTGCGCCGCCGCCGCCTCCTCCTCCTCCCGCATCTCCCTCCTCGCCTCTCGCTGCC 88
consensus_15242#1      GAAGAGATGCAGAAGCAGGTAGCTGCTGCAGGTGCCACTGCCCAGGCAAAGGAAGAGAAC 360
consensus_15242#4      GAAGAGATGCAGAAGCAGGTAGCTGCTGCAGGTGCCACTGCCCAGGCAAAGGAAGAGAAC 165
consensus_15242#2      AAAAAAATGCAAAAGCGGGTAGTTGCTGCGGGTGCCCCCGCCCAGGAAAAGAAAAAGAAG 71
                                     ** *                *  *  **                  

consensus_15242#3      GGCCGCGCTTCGCCAAGA--TGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCG 138
consensus_15242#6      GGCCGCGCTTCGCCAAGA--TGAACAAGGAGAGGCTTATNAAGATGGCCGNCGCCGTCCG 119
consensus_15242#5      GGCCGCGCTTCGCCAAGA--TGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCG 128
consensus_15242#0      GGCCGCGCTTCGCCAAGA--TGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCG 146
consensus_15242#1      GATGATGATGTTCCANAGCTTGTTCCGGGAGAGAATTTCGAAGAGG--TAGCTCAGGAGA 418
consensus_15242#4      GATGATGATGTTCCAGAGCTTGTTCCGGGAGAGAATTTCGAAGAGG--TAGCTCAGGAGA 223
consensus_15242#2      GTTTATGTTGTTCCAGGGTTTGTTCCGGGAAAGATTTTGGAAAAGG--TGGCTCAGGAGA 129
                       *     * *   ***     **  *  *** **  **   ** * *     * * *    

consensus_15242#3      CACCGGCGGG---AAAGGCACCGTGCGCAGGTGGGTAAATCGCCTTTGTCGCGAAATGAA 195
consensus_15242#6      CACCGGCGGG---AAAGGCACCGTGCGCAGG----------------------------- 147
consensus_15242#5      CACCGGCGGG---AAAGGCACCGTGCGCAGG----------------------------- 156
consensus_15242#0      CACCGGCGGG---AAAGGCACCGTGCGCAGG----------------------------- 174
consensus_15242#1      CAAAAGCCTGATCATAGATACCNCAAGTAGTGAAATGTTACTTGACCGCTGTTCTGAGGT 478
consensus_15242#4      CAAAAGCCTGATCATAGATACCNCAAGTAGTGAAATGTTACTTGACCGCTGTTNTGAGGT 283
consensus_15242#2      CAAAAGCCTGTTCATAAAACCCCCAAGTAGTGAAATGTTACTTGCCCGGTGTTTTGAGGT 189
                       **   **  *   * *    **    * **                              

consensus_15242#3      ATGAATGTCTTGTTCTTTGCTTCTCGCCGTGTCGCGAAATGAAACAAATGTGCTTCATTT 255
consensus_15242#6      ------------------------------------------------------------
consensus_15242#5      ------------------------------------------------------------
consensus_15242#0      ------------------------------------------------------------
consensus_15242#1      CATGGTTTTCTATGACGGCCCTGTTTTGCTTCTCCTCGTAGGC-----CAATCTTTGTAT 533
consensus_15242#4      CATGGTTTTNTATGACGGCCCTGTTTTGCTTCTCCTCGTAGGC-----CAATCTTTGTAT 338
consensus_15242#2      CAGGGTTTTTTATGAGGGCCCTGTTTTGTTTTTCCTGGTGGGC-----CATTTTTGGTAT 244
                                                                                   

consensus_15242#3      TGTTTGTTAGGAAGAAGAAGGCCGTCCACAAG---ACGGGGACCACTGACGACAAGAGGC 312
consensus_15242#6      -----------AAGAAGAAGGCCGTCCACAAG---ACGGGGACCACTGACGACAAGAGGC 193
consensus_15242#5      -----------AAGAAGAAGGCCGTCCACAAG---ACGGGGACCACTGACGACAAGAGGC 202
consensus_15242#0      -----------AAGAAGAAGGCCGTCCACAAG---ACGGGGACCACTGACGACAAGAGGC 220
consensus_15242#1      TTGCAATTGGAAACTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATGCTGANATGC 593
consensus_15242#4      TTGCAATTGGAAACTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATGCTGAGATGC 398
consensus_15242#2      TTGCATTTGGAAATTTTTAGTTTTTCCGAGTTTTTCCATAAGTTATAAATGTTGAGATCC 304
                                  **     **    ***         *       *   * *   * *  *

consensus_15242#3      TGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACA 372
consensus_15242#6      TGCAGANCACGCTCAAGNGAGTAGGTGTCAAC---------------------------- 225
consensus_15242#5      TGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACA 262
consensus_15242#0      TGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACA 280
consensus_15242#1      CATGGAGTCCTTTTTACCTGGTTTTGATGTTCACATTTCTGGTTGGTTCAGAATATACTA 653
consensus_15242#4      CATGGAGTCCTTTTTAAAAAAAAAAAA--------------------------------- 425
consensus_15242#2      CATGGAGTCCTTTTTACCGGGTTTTGATGTTCCCATTTTGGGTTGGTTCAGAATATAGTA 364
                           **   *  *  *                                            

consensus_15242#3      TCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGT-GCAAGCTTCCATCGC- 430
consensus_15242#6      ------------------------------------------------------------
consensus_15242#5      TCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTTGCAAGTTTNCATCGNN 322
consensus_15242#0      TCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGT-GCAAGCTTCCATCGCC 339
consensus_15242#1      GCATCAGGGTTTGCAGATAAAAAAAAAAAAAAAAAA------------------------ 689
consensus_15242#4      ------------------------------------------------------------
consensus_15242#2      GCATCAGGGTTTTCAAATGTCCTTCAGGTTTCAATTATTTATTAGTATCATTTATGTTGG 424
                                                                                   

consensus_15242#3      ------------------------------------------------------------
consensus_15242#6      ------------------------------------------------------------
consensus_15242#5      TTTGGTTTCNGTTTTCCAGTTTGTTTTGATCCNTGGNTTTTCNGGTTTGGNAATTTTGGG 382
consensus_15242#0      GCAAACACATGGGTGGTCAGTGGCTCCCCACAGACCAAGAAGCTTCAAGATGTTCTTCCT 399
consensus_15242#1      ------------------------------------------------------------
consensus_15242#4      ------------------------------------------------------------
consensus_15242#2      GAAAAATCCCGCAATGGCCCAGTGTTGATTTTTCCCCAAATGAAAAATAATGATGTGTTT 484
                                                                                   

consensus_15242#3      ------------------------------------------------------------
consensus_15242#6      ------------------------------------------------------------
consensus_15242#5      G----------------------------------------------------------- 383
consensus_15242#0      GGGATCATTAACCAATTGGGTCCTGACAACATGGAGCACCTAAAGAGGATTGCTGAAGAG 459
consensus_15242#1      ------------------------------------------------------------
consensus_15242#4      ------------------------------------------------------------
consensus_15242#2      AACCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------- 530
                                                                                   

consensus_15242#3      ------------------------------------------------------------
consensus_15242#6      ------------------------------------------------------------
consensus_15242#5      ------------------------------------------------------------
consensus_15242#0      ATGCAGAAGCAGGTAGCTGCTGCAGGTGCCACTGCCCAGGCAAAGGAAGAGAACGATGAT 519
consensus_15242#1      ------------------------------------------------------------
consensus_15242#4      ------------------------------------------------------------
consensus_15242#2      ------------------------------------------------------------
                                                                                   

consensus_15242#3      ------------------------------------------------------------
consensus_15242#6      ------------------------------------------------------------
consensus_15242#5      ------------------------------------------------------------
consensus_15242#0      GATGTTCCAGAGCTTGTTCCGGGAGAGAATTTCGAAGAGGTAGCTCAGGAGACAAAAGCC 579
consensus_15242#1      ------------------------------------------------------------
consensus_15242#4      ------------------------------------------------------------
consensus_15242#2      ------------------------------------------------------------
                                                                                   

consensus_15242#3      ------------------------------------------------------------
consensus_15242#6      ------------------------------------------------------------
consensus_15242#5      ------------------------------------------------------------
consensus_15242#0      TGATCATAGATACCACAAGTAGTGAAATGTTACTTGACCGCTGTTCTGAGGTCATGGTTT 639
consensus_15242#1      ------------------------------------------------------------
consensus_15242#4      ------------------------------------------------------------
consensus_15242#2      ------------------------------------------------------------
                                                                                   

consensus_15242#3      ------------------------------------------------------------
consensus_15242#6      ------------------------------------------------------------
consensus_15242#5      ------------------------------------------------------------
consensus_15242#0      TCTATGACGGCCCTGTTTTGCTTCTCCTCGTAGGCCAATCTTTGTATTTGCAATTGGAAA 699
consensus_15242#1      ------------------------------------------------------------
consensus_15242#4      ------------------------------------------------------------
consensus_15242#2      ------------------------------------------------------------
                                                                                   

consensus_15242#3      ------------------------------------------------------------
consensus_15242#6      ------------------------------------------------------------
consensus_15242#5      ------------------------------------------------------------
consensus_15242#0      CTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATGCTGAGATGCCATGGAGTCCTTT 759
consensus_15242#1      ------------------------------------------------------------
consensus_15242#4      ------------------------------------------------------------
consensus_15242#2      ------------------------------------------------------------
                                                                                   

consensus_15242#3      ------------------------------------------------------------
consensus_15242#6      ------------------------------------------------------------
consensus_15242#5      ------------------------------------------------------------
consensus_15242#0      TTACCTGGTTTTGATGTTCACATTTCTGGTTGGTTCAGAATATACTAGCATCAGGGTTTG 819
consensus_15242#1      ------------------------------------------------------------
consensus_15242#4      ------------------------------------------------------------
consensus_15242#2      ------------------------------------------------------------
                                                                                   

consensus_15242#3      ------------------------------------------------------------
consensus_15242#6      ------------------------------------------------------------
consensus_15242#5      ------------------------------------------------------------
consensus_15242#0      CAGATGTCCTTCACGTCTCAACTATCTACTAGTATCATTTATGTTTGGAGATATCCTGCA 879
consensus_15242#1      ------------------------------------------------------------
consensus_15242#4      ------------------------------------------------------------
consensus_15242#2      ------------------------------------------------------------
                                                                                   

consensus_15242#3      ----------------------------------------------
consensus_15242#6      ----------------------------------------------
consensus_15242#5      ----------------------------------------------
consensus_15242#0      ATGGTACAGTGTTGATTTTTCCCCAAATGAAAAATAATGATGTGTT 925
consensus_15242#1      ----------------------------------------------
consensus_15242#4      ----------------------------------------------
consensus_15242#2      ----------------------------------------------
                                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)