cluster # 15264

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Oryza sativa
cluster # 15264 cluster # 15264 Sequences # 21 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15264#0 length = 1276 sequences # 17
consensus_15264#1 length = 286 sequences # 1

consensus_15264#2 length = 241 sequences # 1
consensus_15264#3 length = 190 sequences # 1
consensus_15264#4 length = 184 sequences # 1

consensusID : consensus_15264#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 1276
fasta sequence

                              [AGCAGCAGTTGCAGCAGCAGCAGTGTCTTCTTGCAGAGAAAGAAGGAAGGAACACGAAGGAAGGAAGGCGGCGACGTCGAGATGGTGGTGCTGGTGGTCGCCACGACGTCCGACGCCGCGTCGGCCACTCCGGCCGCCGCGTTCCTCGCCATGCCCGGCTGGACCCCCGGCCCCTCCATCCCGGACGGCGTGGAGAGCTTCGCGAACGGCGCGGGGGTGCGGCTGCTGCGGCACG-GCGCGGGATCGTGGAGGAGGACGACCTGGACCTGCGGTGGGAGGCCGCCACGGGGGAGCGCGTCTCCGAGGTGGTCCTCCTCAGCCGCCACACCGCCGTCTCCAACCGACCCGCGCTCACCGTCCACCCCATCGGCGTCCCGCACCTCAGGGACGGCGTGGACGTGCCGCCGCAGGGCGGGCGCCCCGGGTGGGCCGCGCCGCCCAACCCGCGGATCGGGCCCTGGCTCCGCCTGCTCCGCCGGATCGCCGCCGACCGCGGCCTCGTG-CCGGAGTTTGAGATTACGCTGGAGGGCACTCACCATGGGCCAGTGACCAACACGCCGACGCTGTTTGTTGAGATTGGAAGCACTGAAGAATACTGGGGTAGACAGGATGCTGCTGACGCAGTCGCTCTGCTGCTATGG-AAAGGACTT-GGTCTT-GGAGAAGAAGAAT--CTGTTGGAAATT-GGCATGGGAATGGTGAAAAAGTCC-TTCTAGGCATAGGAGGTGGTCATTATGCTCCTCGTCATATGGATATTGTAACGAAAGATGGTGTATGGGTGGGCCACTTGCTCTCTGGGTATTCTTTGCCAATGGAGGAACCGAAGCAGATGAATGGTAAAAATGTGGCTGAC-GTTGGCGGTATGTGGAAGCATTCCATTAAAGTTT-CATATGAAGCAACAAAAGCGGCTTTCCCAGGAGGAGAGATTATTGCACATATTGATCAAAAGAGCTTCAAAGGATGGCAAAAGAACGCAATTACAAGTTACTTGCAGGAGTTGAACATCAGGGTAGGAAAACCAAATGATTTCTTTTAAGAAGACATAACACCGGGGTAGCAGTACTCTTTTGGTGTTATTGCTAGGTAATTAGTATGTGTATGCTAAAGACCTCG-CCTCCACGG-CCCTGAGATAATAAAATTAATATTTTGAG-CCCTGAACTCGTGAGTTATATTG-CCTGTGCTT-CCATACTGCTGAGTTTTGATCTCTGC-ACCGCATGAGCATCACATA-TTCACATA-CGTATGTTCTT-CCATCCTGAGAAGTCATTTTTGTTTGTTAAAAAA]

[+] EMBL AK073244             [AGCAGCAGTTGCAGCAGCAGCAGTGTCTTCTTGCAGAGAAAGAAGGAAGGAACACGAAGGAAGGAAGGCGGCGACGTCGAGATGGTGGTGCTGGTGGTCGCCACGACGTCCGACGCCGCGTCGGCCACTCCGGCCGCCGCGTTCCTCGCCATGCCCGGCTGGACCCCCGGCCCCTCCATCCCGGACGGCGTGGAGAGCTTCGCGAACGGCGCGGGGGTGCGGCTGCTGCGGCACGCGCGCGGGATCGTGGAGGAGGACGACCTGGACCTGCGGTGGGAGGCCGCCACGGGGGAGCGCGTCTCCGAGGTGGTCCTCCTCAGCCGCCACACCGCCGTCTCCAACCGACCCGCGCTCACCGTCCACCCCATCGGCGTCCCGCACCTCAGGGACGGCGTGGACGTGCCGCCGCAGGGCGGGCGCCCCGGGTGGGCCGCGCCGCCCAACCCGCGGATCGGGCCCTGGCTCCGCCTGCTCCGCCGGATCGCCGCCGACCGCGGCCTCGTG CCGGAGTTTGAGATTACGCTGGAGGGCACTCACCATGGGCCAGTGACCAACACGCCGACGCTGTTTGTTGAGATTGGAAGCACTGAAGAATACTGGGGTAGACAGGATGCTGCTGACGCAGTCGCTCTGCTGCTATGG AAAGGACTT GGTCTT GGAGAAGAAGAAT  CTGTTGGAAATT GGCATGGGAATGGTGAAAAAGTCC TTCTAGGCATAGGAGGTGGTCATTATGCTCCTCGTCATATGGATATTGTAACGAAAGATGGTGTATGGGTGGGCCACTTGCTCTCTGGGTATTCTTTGCCAATGGAGGAACCGAAGCAGATGAATGGTAAAAATGTGGCTGAC GTTGGCGGTATGTGGAAGCATTCCATTAAAGTTT CATATGAAGCAACAAAAGCGGCTTTCCCAGGAGGAGAGATTATTGCACATATTGATCAAAAGAGCTTCAAAGGATGGCAAAAGAACGCAATTACAAGTTACTTGCAGGAGTTGAACATCAGGGTAGGAAAACCAAATGATTTCTTTTAAGAAGACATAACACCGGGGTAGCAGTACTCTTTTGGTGTTATTGCTAGGTAATTAGTATGTGTATGCTAAAGACCTCG CCTCCACGG CCCTGAGATAATAAAATTAATATT                                                                                                                                              ]
[+] EMBL C96848               [  gtcatGTTGCAGCAGCAGCAGTGTCTTCTTGCAGAGAAAGAAGGAAGGAACACGAAGGAAGGAAGGCGGCGACGTCGAGATGGTGGTGCTGGTGGTCGCCACGACGTCCGACGCCGCGTCGGCCACTCCGGCCGCCGCGTTCCTCGCCATGCCCGGCTGGACCCCCGGCCCCTCCATCCCGGACGGCGTGGAGAGCTTCGCGAACGGCGCGGGGGTGCGGCTGCTGCGGCACG GCGCGGGATCGTGGAGGAGGACGACCTGGACCTGCGGTGGGAGGCCGCCACGNGGGAGCGCGTCTCCGAGGTGGTCCTCCTCAGCCGCCACACNGCCGTCTCCAACCGACCCGCGNTCACCGTCCAACCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OSC101391            [         TGCAGCAGCAGCAGTGTCTTCTTGCAGAGAAAGAAGGAAGGAACACGAAGGAAGGAAGGCGGCGACGTCGAGATGGTGGTGCTGGTGGTCGCCACGACGTCCGACGCCGCGTCGGCCACTCCGGCCGCCGCGTTCCTCGCCATGCCCGGNTGGACCCCCGGCCCCTCCATCCCGGACGGCGTGGAGAGCTTCGCGAACGGCGCGGGGGTGCGGTTGTTGCGGCACG GCGCGGGATCGTGGAGGAGGACGACCTGGACCTGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL OSC101401            [         TGCAGCAGCAGCAGTGTCTTCTTGCAGAGAAAGAAGGAAGGAACACGAAGGAAGGAAGGCGGCGACGTCGAGATGGTGGTGCTGGTGGTCGCCACGACGTCCGACGCCGCGTCGGCCACTCCGGCCGCCGCGTTCCTCGCCATGCCCGGNTGGACCCCCGGCCCNTCCATCCCGGACGGCGTGGAGAGCTTCGCGAACGGCGCGGGGGTGCGGTTGTTGCGGCACG GCGCGGGATCGTGGAGGAGGACGACCTGGACCTGCGNTGGGAGGCCGTCACGNGGGAGCGCGTTTNCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL OSC102391            [             GCAGCAGCAGTGTCTTCTTGCAGAGAAAGAAGGAAGGAACACGAAGGAAGNAAGGCGNCGACGTCGAGATGGTGGTGCTGGTGGTCGCCACGACGTCCGACGCCGCGTCGGCCACTCCGNCCGCCNCGTTCCTCNNCATGCCCGGNTNGACCCCCGGCCCCTCCATCCCGGACGGCGTGGAGAGCTTCGCGAACGGCGCGGGAGTGCGGCTGCTGCGGCACG GCGCGGNATCNTGGAGGAGGACGACCTNGACCTGCGGTGGGAGGCCGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU181930             [             GCAGCAGCAGTGTCTTCTTGCAGANAAAGAAGGAAGGAACACGAAGGAAGGAAGGCGGCGACGTCGAGATGGTGGTGCTGGTGGTCGCCACGACGTCCGACGCCGNTTTTGCCACTCCGGCCGCCGCGTTCCTCGCCATGCCCGGNTGGACCCCCGGCCCCTCCATCCCGGACGGCGTGGANAGCTTCGCGAACGGCGCGGGGGTGCGGCTGCTGCGGCACGCGCGCGGNATCGTGGAGGAGGACGACCTGTACCTGCGGTGGGAGGCCnt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU161326             [             GCAGCAGCAGTGTCTTCTTGCAGAGAAAGAAGGAAGGAACACGAAGGAAGGAAGGCGGCGACGTCGAGATGGTGGTGCTGGTGGTCGCCACGACGTCCGACGCCGCGTCGGCCACTCCGGCNGCNGCGTTCNTCGCCATGCCCGGTTNGACCCCCGGCCCCTCCATCCCGNACGGCNTGNAGAGCTTCNCAAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL OSC111011            [             GCAGCAGCAGTGTCTTCTTGCAGAGAAAGAAGGAAGGAACACGAAGGAAGGANGNNGGCGACGTCGAGATGGTGGTGCTGGTGGTCGCCACGACGTCCGACGCNGCGTCGGCCACTCCGGCCGCCNCNTTCCTCGCCATGCCCGGCTGGACCCCCGGCCCCTCCATCCCGGACGGCGTGGAGAGCTTCGCGAAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU181928             [             GCAGCAGCAGTGTCTTCTTGCAGAGAAAGAAGGAAGGAACACGAAGGAAGGAAGGCGGCGACGTCGAGATGGTGGTGCTGGTGGTCGCCACGACGTCCGACGCCGCGTCGGCCACTCCGGCCGCCGCGTTCCTCGCCATGCCCGGCTGGACCCCCGGCCCCTCCATCCCGGACGGCGTGGAGAGCTTCGCGAACGGCGCGGGGGTGCGGCTGCTGCGGCACGCGCGCGGGATCGTGGAGGAGGACGACCTGGACCTGCGGTGGGAGGCCGCCACGGGGGAGCGCGTCTCCGAGGTGGTCCTCCTCAGCCGCCACACCGCCGNNTCCAACCGACCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU100619             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCCTTNTCCGCCGNATCGCCGCCGACCGCGGCCTCGTGCCCGGAGTTTGAGATTACGCTGGAGGGCACTCACCATGGGCCAGTGACCAACACGCCGACGCTGTTTGTTGAGATTGGAAGCACTGAAGAATACTGGGGTAGACAGGATNGT CTGACGCAGTCGCTCTGCTGCTATGG AAAGGACTT GGTCTT GGAGAAGAAGAAT  CTGTTGGAAATT GGCATGGGAATGGTGAAAAAGTCC TTCTAGGCATAGGAGGTGGTCATTATGCTCCTCGTCATATGGATATTGTAACGAAAGATGGTGTATGGGTGGGCCACTTGCTCTCTGGGTATTCTTTGCCAATGGAGGAACCGAAGCAGATGAATGGTAAAAATGTGGCTGAC GTTGGCGGTATGTGGAAGCATTCCATTAAAGTTT CATATGAAGCAACAAAAGCGGCTTTCCCAGGAGGAGAGATTATTGCACATATTGATCAAAAGAGCTTCAAAGGATGGCAAAAGAACGCAATTACAAGTTACTTGCAGGAGTTGAACATCAGGGTAGGAAAACCAAATGATTTCTTTTAAGAAGACATAACACCGGGGTAGCAGTACTCTTTTGGTGTTATTGCTAGGTAATTAGTATGTGTATGCTAAAGACCTCG CCTCCACGG CCCTGAGATAATAAAATTAATATTTTGAG CCCTGAAaaaaaa                                                                                                                           ]
[+] EMBL AU093004             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GAAGAATACTGGGGTAGCCAGGATGCTGCTGACGCAGTCGCTCTNCTGCTATGG AAAGGACTT GGTCTT GGAGAAGAAGAAT  CTGTTGGAAATT GGCATGGGAATGGTGAAAAAGTCC TTCTAGGCATAGGAGGTGGTCATTATGCTCCTCGTCATATGGATATTGTAACGAAAGATGGTGTATGGGTGGGCCACTTGCTCTCTGGGTATTCTTTGCCAATGGAGGAACCGAAGCAGATGAATGGTAAAAATGTGGCTGAC GTTGGCGGTATGTGGAAGCATTCCATTAAAGTTT CATATGAAGCAACAAAAGCGGCTTTCCCAGGAGGAGAGATTATTGCACATATTGATCAAAAGAGCTTCAAAGGATGGCAAAAGAACGCAATTACAAGTTACTTGCAGGAGTTGAACATCAGGGTAGGAAAACCAAATGATTTCTTTTAAGAAGACATAACACCGGGGTAGCAGTACTCTTTTGGTGTTATTGCTAGGTAATTAGTATGTGTATGCTAAAGACCTCG CCTCCACGG CCCTGAGATAATAAAATTAATATTTTGAG CCCTGAACTCGTGAGTTATATTG CCTGTGCTT CCATACTGCTGAGTTTTGATCTCTGC ACCGCATGAGCATCACATA TTCACATA CGTATGTTCTT CCATCCTGAGAAGTCATTTTTGTTTGTTAAAAAA]
[+] EMBL AU161327             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              anTGGAAAAGGACTTGGGTCTTGGGAGAAGAAGGATTCCTGTTGGAAATTGGGCATGGGAATGGTGAAAAAGTCCTTTCTAGGCATAGAAGGTGGTCATTATGCTCCTCGTCATATGGATATTGT ACGAAAGATGGTGTATGGGTGGGCCACTTGCTNTNTGGGTATTCTTTGCCAATGGAGGAACCGAAGCAGATGAATGGTAAAAATGTGGCTGACNGTTGGCGGTATGTGAAAGCATTCCATTAAAGTTT CATATGAAGCAACAAAAGCGGCTTTCCCAGGAGGAGAGATTATTGCACATATTGATCAAAAGAGCTTCAAAGGATGGCAAAAGAACGCAATTACAAGTTACTTGCAGGAGTTGAACATCAGGGTAGGAAAACCAAATGATTTCTTTTAAGAAGNCATAACACCGGGGTAGCAGTACTCTTTTGGTGTTATTGCTAGGTAATTAGTATGTGTATGCTAAAGACCTCG CCTCCACGG CCCTGAGATAATAAAATTAATATTTTGAG CCCTGAACTCGTGAGTTATATTG CCTGTGCTT CCATACTGCTGAGTTTTGATCTCTGC ACCGCATGAGCATCACATA TTCACATA CGTATGTTCTT CCATCCTGAGAAGTCATTTTTGTTTGTTAAAAAA]
[+] EMBL AU181356             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGCATAGGAGGTGGTCATTATGCTCCTCGTCATATGGATATTGTAACGAAAGATGGTGTATGGGTGGGCCACTTGCTCTCTGGGTATTCTTTGCCAATGGAGGAACCGAAGCAGATGAATGGTAAAAATGTGGCTGAC GTTGGCGGTATGTGGAAGCATTCCATTAAAGTTT CATATGAAGCAACAAAAGCGGCTTTCCCAGGAGGAGAGATTATTGCACATATTGATCAAAAGAGCTTCAAAGGATGGCAAAAGAACGCAATTACAAGTTACTTGCAGGAGTTGAACATCAGGGTAGGAAAACCAAATGATTTCTTTTAAGAAGACATAACACCGGGGTAGCAGTACTCTTTTGGTGTTATTGCTAGGTAATTAGTATGTGTATGCTAAAGACCTCG CCTCCACGG CCCTGAGATAATAAAATTAATATTTTGAG CCCaaaaa                                                                                                                                ]
[+] EMBL AU092168             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGGTANAAATGTGGCTGAC GTTGGCGGTATGTGGAAGCATTCCATTAAAGTTTCCATATGAAGCAACAAAAGCGGCTTTCCCAGGAGGAGAGATTATTGCACATATTGATCAAAAGAGCTTCAAAGGNTGGCAAAAGAACGCAATTACAAGTTACTTGCAGGAGTTGAACATNAGGGTAGGAAAACCAAATGATTTCTTTTAAGAAGACATAACACCGGGGTAGCAGTACTCTTTTGGTGTTATTGCTAGGTAATTAGTATGTGTATGCTAAAGACCTCG CCTCCACGG CCCTGAGATAATAAAATTAATATTTTGAG CCCaaaaa                                                                                                                                ]
[+] EMBL AU181929             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AC GTTGGCGGTATGTGGAAGCATTCCATTAAAGTTT CATATGAAGCAACAAAAGCGGCTTTCCCAGGAGGAGAGATTATTGCACATATTGATCAAAAGAGCTTCAAAGGATGGCAAAAGAACGCAATTACAAGTTACTTGCAGGAGTTGAACATCAGGGTAGGAAAACCAAATGATTTCTTTTAAGAAGACATAACACCGGGGTAGCAGTACTCTTTTGGTGTTATTGCTAGGTAATTAGTATGTGTATGCTAAAGACCTCG CCTCCACGG CCCTGAGATAATAAAATTAATATTTTGAG CCCTGAACTCGTGAGTTATATTG CCTGTGCTT CCATACTGCTGAGTTTTGATCTCTGC ACCGCATGAGCATCACATA TTCACATA CGTATGTTCTT CCATCCTGAGAAGTCATTTTTGTTTGTTAAAAAA]
[+] EMBL AU181992             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTGGCGGTATGTGGAAGCATTCCATTAAAGTTT CATATGAAGCAACAAAANCGGCTTTCCCAGGAGGAGAGATTATTGCACATATTGATCAAAAGAGCTTCAAAGGATGGCAAAAGAACGCAATTACAAGTTACTTGCAGGAGTTGAACATCAGGGTAGGAAAACCAAATGATTTCTTTTAAGAAGACATAACACCGGGGTAGCAGTACTCTTTTGGTGTTATTGCTAGGTAATTAGTATGTGTATGCTAAAGACCTCGCCCCCCNCGGCCCCTGAGATAATAAAATTAATATTTTGAGCCCCTGAACTCGTGAGGTATATTGCCCTGTGCTTCCCATACTGCTGAGTTTTGATCTCTGCNCCCGCATGAGCATCACATATTTCACATA CGTATGTTCTTCCCATCCTGAGAAGTCATTTTTGTTTGTTAAAAAA]
[+] EMBL AU181931             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CGGTATGTGGAAGCATTCCATTAAAGTTT CATATGAAGCAACAAAAGCGGCTTTCCCAGGAGGAGAGATTATTGCACATATTGATCAAAAGAGCTTCAAAGGATGGCAAAAGAACGCAATTNCAAGTTACTTGCAGGAGTTGAACATCAGGGTAGGAAAACCAAATGATTTNTTTTAAGAAGACATAACACCGGGGTAGCAGTACTCTTTTGGTGTTATTGCTAGGTAATTAGTATGTGTATGCTAAAGACCTCG CCTCCACGG CCCTGAGATAATAAAATTAATATTTTGAG CCCTGAACTCGTGAGTTATATTG CCTGTGCTT CCATACTGCTGAGTTTTGATCTCTGC ACCGCATGAGCATCACATA TTCACATACCGTATGTTCTT CCATCCTGAGAAGTCATTTTTGTTTGTTAAAAAA]




>consensus_15264#0
AGCAGCAGTTGCAGCAGCAGCAGTGTCTTCTTGCAGAGAAAGAAGGAAGGAACACGAAGG
AAGGAAGGCGGCGACGTCGAGATGGTGGTGCTGGTGGTCGCCACGACGTCCGACGCCGCG
TCGGCCACTCCGGCCGCCGCGTTCCTCGCCATGCCCGGCTGGACCCCCGGCCCCTCCATC
CCGGACGGCGTGGAGAGCTTCGCGAACGGCGCGGGGGTGCGGCTGCTGCGGCACGGCGCG
GGATCGTGGAGGAGGACGACCTGGACCTGCGGTGGGAGGCCGCCACGGGGGAGCGCGTCT
CCGAGGTGGTCCTCCTCAGCCGCCACACCGCCGTCTCCAACCGACCCGCGCTCACCGTCC
ACCCCATCGGCGTCCCGCACCTCAGGGACGGCGTGGACGTGCCGCCGCAGGGCGGGCGCC
CCGGGTGGGCCGCGCCGCCCAACCCGCGGATCGGGCCCTGGCTCCGCCTGCTCCGCCGGA
TCGCCGCCGACCGCGGCCTCGTGCCGGAGTTTGAGATTACGCTGGAGGGCACTCACCATG
GGCCAGTGACCAACACGCCGACGCTGTTTGTTGAGATTGGAAGCACTGAAGAATACTGGG
GTAGACAGGATGCTGCTGACGCAGTCGCTCTGCTGCTATGGAAAGGACTTGGTCTTGGAG
AAGAAGAATCTGTTGGAAATTGGCATGGGAATGGTGAAAAAGTCCTTCTAGGCATAGGAG
GTGGTCATTATGCTCCTCGTCATATGGATATTGTAACGAAAGATGGTGTATGGGTGGGCC
ACTTGCTCTCTGGGTATTCTTTGCCAATGGAGGAACCGAAGCAGATGAATGGTAAAAATG
TGGCTGACGTTGGCGGTATGTGGAAGCATTCCATTAAAGTTTCATATGAAGCAACAAAAG
CGGCTTTCCCAGGAGGAGAGATTATTGCACATATTGATCAAAAGAGCTTCAAAGGATGGC
AAAAGAACGCAATTACAAGTTACTTGCAGGAGTTGAACATCAGGGTAGGAAAACCAAATG
ATTTCTTTTAAGAAGACATAACACCGGGGTAGCAGTACTCTTTTGGTGTTATTGCTAGGT
AATTAGTATGTGTATGCTAAAGACCTCGCCTCCACGGCCCTGAGATAATAAAATTAATAT
TTTGAGCCCTGAACTCGTGAGTTATATTGCCTGTGCTTCCATACTGCTGAGTTTTGATCT
CTGCACCGCATGAGCATCACATATTCACATACGTATGTTCTTCCATCCTGAGAAGTCATT
TTTGTTTGTTAAAAAA

consensusID : consensus_15264#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 286
fasta sequence

                              [GCAGCAGCAGTNTCTTCTTGCAGAGAAAGAAGGAAGGAACACGAAGGAAGGAAGGCNGCGACGTCGAGATNGTGGTGCTGGTGGTCNNCACNACNTCCGACGNCGCGTCGNCCACTCCGGCCGNCGCGTTCCTCGCCATNNCCNGCTGGACCNCCNGCCCCTCCATTCCGGACNGCGTGGAGAGCTTCGCANACNGCTCNNGGGTNCGGCTNCTGCGGCACGGCGCTGGAATCGTNGAGGAGGACGACCTGGACCTGCGGTNGGAGGCCGCCACGGGTGAGCGCGT]

[+] EMBL AU069511             [GCAGCAGCAGTNTCTTCTTGCAGAGAAAGAAGGAAGGAACACGAAGGAAGGAAGGCNGCGACGTCGAGATNGTGGTGCTGGTGGTCNNCACNACNTCCGACGNCGCGTCGNCCACTCCGGCCGNCGCGTTCCTCGCCATNNCCNGCTGGACCNCCNGCCCCTCCATTCCGGACNGCGTGGAGAGCTTCGCANACNGCTCNNGGGTNCGGCTNCTGCGGCACGGCGCTGGAATCGTNGAGGAGGACGACCTGGACCTGCGGTNGGAGGCCGCCACGGGTGAGCGCGT]




>consensus_15264#1
GCAGCAGCAGTNTCTTCTTGCAGAGAAAGAAGGAAGGAACACGAAGGAAGGAAGGCNGCG
ACGTCGAGATNGTGGTGCTGGTGGTCNNCACNACNTCCGACGNCGCGTCGNCCACTCCGG
CCGNCGCGTTCCTCGCCATNNCCNGCTGGACCNCCNGCCCCTCCATTCCGGACNGCGTGG
AGAGCTTCGCANACNGCTCNNGGGTNCGGCTNCTGCGGCACGGCGCTGGAATCGTNGAGG
AGGACGACCTGGACCTGCGGTNGGAGGCCGCCACGGGTGAGCGCGT

consensusID : consensus_15264#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 241
fasta sequence

                              [ATTTCTTTTAAGAAGACATAACACCGGGGTAGCAGTACTCTTTTGGTGTTATTGCTAGGTAATTAGTATGTGTATGCTAAAGACCTCGCCTCCACAGCCCTGAGATAATAAAATTAATATTTTGAGCCCAAAAAAAAAAAAAAAAAATTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF330728             [ATTTCTTTTAAGAAGACATAACACCGGGGTAGCAGTACTCTTTTGGTGTTATTGCTAGGTAATTAGTATGTGTATGCTAAAGACCTCGCCTCCACAGCCCTGAGATAATAAAATTAATATTTTGAGCCCAAAAAAAAAAAAAAAAAATTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_15264#2
ATTTCTTTTAAGAAGACATAACACCGGGGTAGCAGTACTCTTTTGGTGTTATTGCTAGGT
AATTAGTATGTGTATGCTAAAGACCTCGCCTCCACAGCCCTGAGATAATAAAATTAATAT
TTTGAGCCCAAAAAAAAAAAAAAAAAATTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAATTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
A

consensusID : consensus_15264#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 190
fasta sequence

                              [GCAGCAGCAGTGTCTTCTTGCAGAGAAAGAAGGAGGAACACGAAGGAAGAAGGCGGCGACGTCGAGATGGTGGTGCTGGTGGTCGCACGACGTCCGACGACCGCGTCGCCACTCCGGNCGCGCGTTCCTCGTCATNCCGCTGGACCCCCGCCCCTCCATCCCGGACGCGTGGAGAGCTTCGCAACGCGCG]

[+] EMBL AU063417             [GCAGCAGCAGTGTCTTCTTGCAGAGAAAGAAGGAGGAACACGAAGGAAGAAGGCGGCGACGTCGAGATGGTGGTGCTGGTGGTCGCACGACGTCCGACGACCGCGTCGCCACTCCGGNCGCGCGTTCCTCGTCATNCCGCTGGACCCCCGCCCCTCCATCCCGGACGCGTGGAGAGCTTCGCAACGCGCG]




>consensus_15264#3
GCAGCAGCAGTGTCTTCTTGCAGAGAAAGAAGGAGGAACACGAAGGAAGAAGGCGGCGAC
GTCGAGATGGTGGTGCTGGTGGTCGCACGACGTCCGACGACCGCGTCGCCACTCCGGNCG
CGCGTTCCTCGTCATNCCGCTGGACCCCCGCCCCTCCATCCCGGACGCGTGGAGAGCTTC
GCAACGCGCG

consensusID : consensus_15264#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 184
fasta sequence

                              [CAGCAGCAGTNTCTTCTTGCAGANAAAGAAGGAAGGAACACGAAGGAAGAAAGGCGGCGACGTCGAGATGGTNGTNCTGGTGGTCGCCACGACGTCCGACGCCNCGTCGCCACTCCGGCCGCNGCNTTCCTNGTCATGCCCGGNTGGACCCCCGGCCCNTCCATCCCGNACGGCGTAGAGAGCT]

[+] EMBL AU068125             [CAGCAGCAGTNTCTTCTTGCAGANAAAGAAGGAAGGAACACGAAGGAAGAAAGGCGGCGACGTCGAGATGGTNGTNCTGGTGGTCGCCACGACGTCCGACGCCNCGTCGCCACTCCGGCCGCNGCNTTCCTNGTCATGCCCGGNTGGACCCCCGGCCCNTCCATCCCGNACGGCGTAGAGAGCT]




>consensus_15264#4
CAGCAGCAGTNTCTTCTTGCAGANAAAGAAGGAAGGAACACGAAGGAAGAAAGGCGGCGA
CGTCGAGATGGTNGTNCTGGTGGTCGCCACGACGTCCGACGCCNCGTCGCCACTCCGGCC
GCNGCNTTCCTNGTCATGCCCGGNTGGACCCCCGGCCCNTCCATCCCGNACGGCGTAGAG
AGCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15264#1      -------------GCAGCAGCAGTNTCTTCTTGCAGAGAAAGAAGGAAGGAACACGAAGG 47
consensus_15264#3      -------------GCAGCAGCAGTGTCTTCTTGCAGAGAAAGAAGGA-GGAACACGAAGG 46
consensus_15264#4      --------------CAGCAGCAGTNTCTTCTTGCAGANAAAGAAGGAAGGAACACGAAGG 46
consensus_15264#0      AGCAGCAGTTGCAGCAGCAGCAGTGTCTTCTTGCAGAGAAAGAAGGAAGGAACACGAAGG 60
consensus_15264#2      ----------------------ATTTCTTTT---------AAGAAGACATAACACCGGGG 29
                                              * **** *         *  * **   *****   **

consensus_15264#1      AAGGAAGGCNGCGACGTCGAGATNGTGGTGCT-GGTGGTCNNCACNACNTCCGACGNC-G 105
consensus_15264#3      AAG-AAGGCGGCGACGTCGAGATGGTGGTGCT-GGTGGTCGC-ACGACGTCCGACGACCG 103
consensus_15264#4      AAGAAAGGCGGCGACGTCGAGATGGTNGTNCT-GGTGGTCGCCACGACGTCCGACGCC-N 104
consensus_15264#0      AAGGAAGGCGGCGACGTCGAGATGGTGGTGCT-GGTGGTCGCCACGACGTCCGACGCC-G 118
consensus_15264#2      TAG-----CAGTACTCTTTTGGTGTTATTGCTAGGTAATTAGTATG-TGTATGCTAAAGA 83
                        **     * *     *   * *  *  * ** ***  *    *     *  *       

consensus_15264#1      CGTCGNCCACTCCGGCCGNCGCGTTCCTCGCCATNNCCNGCTGGACCNCCNGCCCCTCCA 165
consensus_15264#3      CGTCGCC-ACTCCGGNCGC-GCGTTCCTCGTCATNC--CGCTGGACCCCCG-CCCCTCCA 158
consensus_15264#4      CGTCGCC-ACTCCGGCCGCNGCNTTCCTNGTCATGCCCGGNTGGACCCCCGGCCCNTCCA 163
consensus_15264#0      CGTCGGCCACTCCGGCCGCCGCGTTCCTCGCCATGCCCGGCTGGACCCCCGGCCCCTCCA 178
consensus_15264#2      CCTCGCC-TCCACAGCC-CTGAGATAATAAAATTAATATTTTGAGCCCAAAAAAAAAAAA 141
                       * *** *  *  * * *   *   *  *     *       **  **            *

consensus_15264#1      TTCCGGACNGCGTGGAGAGCTTCGCANACNGCTCNNGGGTNCGGCTNCTGCGGCACGGCG 225
consensus_15264#3      TCCCGGACG-CGTGGAGAGCTTCGCAACGCGCG--------------------------- 190
consensus_15264#4      TCCCGNACGGCGTAGAGAGCT--------------------------------------- 184
consensus_15264#0      TCCCGGACGGCGTGGAGAGCTTCGCGAACGGCGCGGGGGTGCGGCTGCTGCGGCACGGCG 238
consensus_15264#2      AAAAAATTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTTTTTA 201
                                      * *                                          

consensus_15264#1      CTGGAATCGTNGAGGAGGACGACCTGGACCTGCGGTNGGAGGCCGCCACGGGTGAGCGCG 285
consensus_15264#3      ------------------------------------------------------------
consensus_15264#4      ------------------------------------------------------------
consensus_15264#0      C-GGGATCGTGGAGGAGGACGACCTGGACCTGCGGTGGGAGGCCGCCACGGGGGAGCGCG 297
consensus_15264#2      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------------- 241
                                                                                   

consensus_15264#1      T----------------------------------------------------------- 286
consensus_15264#3      ------------------------------------------------------------
consensus_15264#4      ------------------------------------------------------------
consensus_15264#0      TCTCCGAGGTGGTCCTCCTCAGCCGCCACACCGCCGTCTCCAACCGACCCGCGCTCACCG 357
consensus_15264#2      ------------------------------------------------------------
                                                                                   

consensus_15264#1      ------------------------------------------------------------
consensus_15264#3      ------------------------------------------------------------
consensus_15264#4      ------------------------------------------------------------
consensus_15264#0      TCCACCCCATCGGCGTCCCGCACCTCAGGGACGGCGTGGACGTGCCGCCGCAGGGCGGGC 417
consensus_15264#2      ------------------------------------------------------------
                                                                                   

consensus_15264#1      ------------------------------------------------------------
consensus_15264#3      ------------------------------------------------------------
consensus_15264#4      ------------------------------------------------------------
consensus_15264#0      GCCCCGGGTGGGCCGCGCCGCCCAACCCGCGGATCGGGCCCTGGCTCCGCCTGCTCCGCC 477
consensus_15264#2      ------------------------------------------------------------
                                                                                   

consensus_15264#1      ------------------------------------------------------------
consensus_15264#3      ------------------------------------------------------------
consensus_15264#4      ------------------------------------------------------------
consensus_15264#0      GGATCGCCGCCGACCGCGGCCTCGTGCCGGAGTTTGAGATTACGCTGGAGGGCACTCACC 537
consensus_15264#2      ------------------------------------------------------------
                                                                                   

consensus_15264#1      ------------------------------------------------------------
consensus_15264#3      ------------------------------------------------------------
consensus_15264#4      ------------------------------------------------------------
consensus_15264#0      ATGGGCCAGTGACCAACACGCCGACGCTGTTTGTTGAGATTGGAAGCACTGAAGAATACT 597
consensus_15264#2      ------------------------------------------------------------
                                                                                   

consensus_15264#1      ------------------------------------------------------------
consensus_15264#3      ------------------------------------------------------------
consensus_15264#4      ------------------------------------------------------------
consensus_15264#0      GGGGTAGACAGGATGCTGCTGACGCAGTCGCTCTGCTGCTATGGAAAGGACTTGGTCTTG 657
consensus_15264#2      ------------------------------------------------------------
                                                                                   

consensus_15264#1      ------------------------------------------------------------
consensus_15264#3      ------------------------------------------------------------
consensus_15264#4      ------------------------------------------------------------
consensus_15264#0      GAGAAGAAGAATCTGTTGGAAATTGGCATGGGAATGGTGAAAAAGTCCTTCTAGGCATAG 717
consensus_15264#2      ------------------------------------------------------------
                                                                                   

consensus_15264#1      ------------------------------------------------------------
consensus_15264#3      ------------------------------------------------------------
consensus_15264#4      ------------------------------------------------------------
consensus_15264#0      GAGGTGGTCATTATGCTCCTCGTCATATGGATATTGTAACGAAAGATGGTGTATGGGTGG 777
consensus_15264#2      ------------------------------------------------------------
                                                                                   

consensus_15264#1      ------------------------------------------------------------
consensus_15264#3      ------------------------------------------------------------
consensus_15264#4      ------------------------------------------------------------
consensus_15264#0      GCCACTTGCTCTCTGGGTATTCTTTGCCAATGGAGGAACCGAAGCAGATGAATGGTAAAA 837
consensus_15264#2      ------------------------------------------------------------
                                                                                   

consensus_15264#1      ------------------------------------------------------------
consensus_15264#3      ------------------------------------------------------------
consensus_15264#4      ------------------------------------------------------------
consensus_15264#0      ATGTGGCTGACGTTGGCGGTATGTGGAAGCATTCCATTAAAGTTTCATATGAAGCAACAA 897
consensus_15264#2      ------------------------------------------------------------
                                                                                   

consensus_15264#1      ------------------------------------------------------------
consensus_15264#3      ------------------------------------------------------------
consensus_15264#4      ------------------------------------------------------------
consensus_15264#0      AAGCGGCTTTCCCAGGAGGAGAGATTATTGCACATATTGATCAAAAGAGCTTCAAAGGAT 957
consensus_15264#2      ------------------------------------------------------------
                                                                                   

consensus_15264#1      ------------------------------------------------------------
consensus_15264#3      ------------------------------------------------------------
consensus_15264#4      ------------------------------------------------------------
consensus_15264#0      GGCAAAAGAACGCAATTACAAGTTACTTGCAGGAGTTGAACATCAGGGTAGGAAAACCAA 1017
consensus_15264#2      ------------------------------------------------------------
                                                                                   

consensus_15264#1      ------------------------------------------------------------
consensus_15264#3      ------------------------------------------------------------
consensus_15264#4      ------------------------------------------------------------
consensus_15264#0      ATGATTTCTTTTAAGAAGACATAACACCGGGGTAGCAGTACTCTTTTGGTGTTATTGCTA 1077
consensus_15264#2      ------------------------------------------------------------
                                                                                   

consensus_15264#1      ------------------------------------------------------------
consensus_15264#3      ------------------------------------------------------------
consensus_15264#4      ------------------------------------------------------------
consensus_15264#0      GGTAATTAGTATGTGTATGCTAAAGACCTCGCCTCCACGGCCCTGAGATAATAAAATTAA 1137
consensus_15264#2      ------------------------------------------------------------
                                                                                   

consensus_15264#1      ------------------------------------------------------------
consensus_15264#3      ------------------------------------------------------------
consensus_15264#4      ------------------------------------------------------------
consensus_15264#0      TATTTTGAGCCCTGAACTCGTGAGTTATATTGCCTGTGCTTCCATACTGCTGAGTTTTGA 1197
consensus_15264#2      ------------------------------------------------------------
                                                                                   

consensus_15264#1      ------------------------------------------------------------
consensus_15264#3      ------------------------------------------------------------
consensus_15264#4      ------------------------------------------------------------
consensus_15264#0      TCTCTGCACCGCATGAGCATCACATATTCACATACGTATGTTCTTCCATCCTGAGAAGTC 1257
consensus_15264#2      ------------------------------------------------------------
                                                                                   

consensus_15264#1      -------------------
consensus_15264#3      -------------------
consensus_15264#4      -------------------
consensus_15264#0      ATTTTTGTTTGTTAAAAAA 1276
consensus_15264#2      -------------------