cluster # 1528

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Oryza sativa
cluster # 1528 cluster # 1528 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1528#0 length = 2726 sequences # 1

consensus_1528#1 length = 700 sequences # 1

consensusID : consensus_1528#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2726
fasta sequence

                              [TTCATTCTAAAAAAAAAAGAAAAAAGAAAGGAAAAAGAAAGAAAGAAAGAGCATGGAGGCGGAGGCGGCAATGGCGCCGGCGGCGGCGCCAGCGGCGGCGACAGGGGCGGTGCGGGTGGAGAAGGTGAGGGGGAGGTCAGCGGTGACCAGGTGCTTCGCCAAGTACCCGCTCAAGCTCATCGCCCCCTCCAAGGCCGGGCGCGCGTCCTCCGGCGCCGCGTGGCTCTACGCCATCACCTACGGCGGCGGCATCGTCTCCGTGAGCCGCCGCATCGCCTCCTCTTCCTCCCCCGGATTGCAATCAACCAACCAACCAACAGTTTGCCTCCTTTCTCGAGAGAGAGGCAATCGTGAGTGCGAGTGTCTGATGCGTTTTTGTTCTTCTTTTTTGGGGGCTGTGCTTGTAGGGGGACATCATCTCCTGCACGGTGGCCGTCGGCGACGGGTGCGCGGCGGCGATGACCACGCAGGCCTCCACTAAGGTCCTTTTTTCTTTCAATTGTTCTCATGCGATTGGCCGAGTAAATACTGTTTACATTTCCTTAGTTGGAGAAAATGACATAGGTTAGTGAACGAATGTTTCTCATAAATGCTTACAGCTAGAACACTTTTAGGGCCCCCCCCCCCCCCGTATTTTTTTTTCCTTTTTGAAAGAAGGGCAAAATCTTTGCCAACTTTAGGGTCCCTTTTGAAATGATGGATTGTCATAAGAATTTTGAAGGATTTAATCTTCTAAATGATTTTTTATTTCTATCGAGCCAAGGATAGAGAATATTCCATATGAAGTAAGCAAGAGGCCCAACCTCTTGGAAACTTTCCTTTGCTTTGTTAGTTTCCTATGATGCTATCAAAGGGCTCCTCTTCATCTTTCCTGTGTTTTTCATTCCTGTAGGATTAGAGAAACATGCAACTTCAATTCCTGCGTTTTTCCTATCCCGCGTTTCAAAGGGACCCTTAAATAATGTTACAGCTAGAGCTAGAGGGGTCTTGATGTCAATTCCATATAAGTGTAGGGTATGCTATTAGAATTACCAAATGCAACCTAGGACTTAAACTAGTCTATTGTAATAACATGATATTGGGCTTTGTGCGTCTTTGACACAGCAGCTGGGTTATAGCAATGCACCCGTAGTCAAGTGTAATAACATACTTCATTATCGAAATTTTAACTGAAAAAAGTTAGTTCTTGAGGAATATATTGATTTTTTTTAACGAACCATATATATTGATTGTTTTATGTTTGTCAATGGCCAAGTGCTTGTTTAGGTGTACAAGGCCGTGGATTCAAAATGTTCTGAGCAGGTGCTAGAGGCAAGAGTTGGAGAAGATGCACTCTTTGCACTTATTCCAGATCCTGTAACCTGCTTCTCAATGGCTCGATACCACCAGAAGCAAGTGTTTCATGTCTTTCCCAATTCAAACTTAGTCGTTGTAGACTGGTTTACAAGTGGTCGTTACGAGAGTGGAGAAAAATGGAATTTCAGCTTCTACAAGAGCATCAACCATATTCTTTTGGAAGATCAGCCTCTATTTATTGACTCGGTAAGAGCTCACCTTTCAGCTTCTCCTAACATTTGCCTGATTAATCTTGTTCATCCCCACTCTAATCATCGGTTGTGCTTAATGCCATGCCACATAACCTCTTCTAATGTCTGAGCAGGTTTTATTGGAACAGAGCTCAAATTTTAGTATTGCTGACCGAATGCAGGAATACAATGTGGTTGCAATGGTTATTTTGCTGGGGTAAGGCCATCAAACACTGAAATTTGCCTTCTGCACAGGTCTTCTCGACCTTTGCAGATATGACTTTGGCTACTGCCTATGTGCTGCTTCGGTTTTCACATAATCAACCGTGTTCTTTTGTCTTTGGTAGTTACTACAATTATGCTAGTTGAGGATCTTTCAGAATTTCTAGAAAATTGTAGGGAATCAGAGGAATCCATGGACCATAGTTTACTTCAGATTTCGAAGAAAATTGTTGGGAATCAGGAACTATGGACTATGGTTCACTCAGTCTAACAAGTTACTAGTGGAATCCCAGATGGCTAGATCTGGATTACTTACAGACAATGGTTCAGTGAATCAGTGGCATACTTTCCCTTGCAGACCAAAGTTAAAGCACATACAAGATCAGATGCAAGATGAGGTAAAAAAGATGATGTCTGTACAACTGCGCCCTCCCACTTCTGCCGGAGGTCGCTACTCGACAAGATCACAACCCCTACATCCCCAGAGGCCTCCAATCATCGCCTCCTGTAGTCCATTCGGTCGCATGGGCACTGGGATGGTTGCTCGGATAACCGCAGTGAGCACAGAATCTGTGTACAGCTTCCTGAGACATCATCTGGCAGCACTGGAACCATTCCTTGGCGCTTGCCCATATCCTGCATCATGAAGCTAGCGGCCATCTGACTGTTGATGGATCATCATGAAATCTTCACTTCCGACGAAGAATGAAGATGTAAAAATTGTCTTCGCATACGCCTGCTCCCCGTAGTTGATTGAGCATGCTTTGATTTTGGTTGTACATGTTATAGTTCTTTGTGAATTTCTGAGTAAAAGAAGATACTCTGGGAATTGGGCAGCTGATGATCATGACCCTCTTTCTGTACTTTACAATAAATCCTCCTTCCTAGTCTTGGTGGGCCAGGCTGAAATGTTGGATTCGTTGGGCTGGACCCAACTTATGTTAGTTGGACCAGATAATTAATTCATCAGCAATGCAA]

[+] EMBL AK119397             [TTCATTCTAAAAAAAAAAGAAAAAAGAAAGGAAAAAGAAAGAAAGAAAGAGCATGGAGGCGGAGGCGGCAATGGCGCCGGCGGCGGCGCCAGCGGCGGCGACAGGGGCGGTGCGGGTGGAGAAGGTGAGGGGGAGGTCAGCGGTGACCAGGTGCTTCGCCAAGTACCCGCTCAAGCTCATCGCCCCCTCCAAGGCCGGGCGCGCGTCCTCCGGCGCCGCGTGGCTCTACGCCATCACCTACGGCGGCGGCATCGTCTCCGTGAGCCGCCGCATCGCCTCCTCTTCCTCCCCCGGATTGCAATCAACCAACCAACCAACAGTTTGCCTCCTTTCTCGAGAGAGAGGCAATCGTGAGTGCGAGTGTCTGATGCGTTTTTGTTCTTCTTTTTTGGGGGCTGTGCTTGTAGGGGGACATCATCTCCTGCACGGTGGCCGTCGGCGACGGGTGCGCGGCGGCGATGACCACGCAGGCCTCCACTAAGGTCCTTTTTTCTTTCAATTGTTCTCATGCGATTGGCCGAGTAAATACTGTTTACATTTCCTTAGTTGGAGAAAATGACATAGGTTAGTGAACGAATGTTTCTCATAAATGCTTACAGCTAGAACACTTTTAGGGCCCCCCCCCCCCCCGTATTTTTTTTTCCTTTTTGAAAGAAGGGCAAAATCTTTGCCAACTTTAGGGTCCCTTTTGAAATGATGGATTGTCATAAGAATTTTGAAGGATTTAATCTTCTAAATGATTTTTTATTTCTATCGAGCCAAGGATAGAGAATATTCCATATGAAGTAAGCAAGAGGCCCAACCTCTTGGAAACTTTCCTTTGCTTTGTTAGTTTCCTATGATGCTATCAAAGGGCTCCTCTTCATCTTTCCTGTGTTTTTCATTCCTGTAGGATTAGAGAAACATGCAACTTCAATTCCTGCGTTTTTCCTATCCCGCGTTTCAAAGGGACCCTTAAATAATGTTACAGCTAGAGCTAGAGGGGTCTTGATGTCAATTCCATATAAGTGTAGGGTATGCTATTAGAATTACCAAATGCAACCTAGGACTTAAACTAGTCTATTGTAATAACATGATATTGGGCTTTGTGCGTCTTTGACACAGCAGCTGGGTTATAGCAATGCACCCGTAGTCAAGTGTAATAACATACTTCATTATCGAAATTTTAACTGAAAAAAGTTAGTTCTTGAGGAATATATTGATTTTTTTTAACGAACCATATATATTGATTGTTTTATGTTTGTCAATGGCCAAGTGCTTGTTTAGGTGTACAAGGCCGTGGATTCAAAATGTTCTGAGCAGGTGCTAGAGGCAAGAGTTGGAGAAGATGCACTCTTTGCACTTATTCCAGATCCTGTAACCTGCTTCTCAATGGCTCGATACCACCAGAAGCAAGTGTTTCATGTCTTTCCCAATTCAAACTTAGTCGTTGTAGACTGGTTTACAAGTGGTCGTTACGAGAGTGGAGAAAAATGGAATTTCAGCTTCTACAAGAGCATCAACCATATTCTTTTGGAAGATCAGCCTCTATTTATTGACTCGGTAAGAGCTCACCTTTCAGCTTCTCCTAACATTTGCCTGATTAATCTTGTTCATCCCCACTCTAATCATCGGTTGTGCTTAATGCCATGCCACATAACCTCTTCTAATGTCTGAGCAGGTTTTATTGGAACAGAGCTCAAATTTTAGTATTGCTGACCGAATGCAGGAATACAATGTGGTTGCAATGGTTATTTTGCTGGGGTAAGGCCATCAAACACTGAAATTTGCCTTCTGCACAGGTCTTCTCGACCTTTGCAGATATGACTTTGGCTACTGCCTATGTGCTGCTTCGGTTTTCACATAATCAACCGTGTTCTTTTGTCTTTGGTAGTTACTACAATTATGCTAGTTGAGGATCTTTCAGAATTTCTAGAAAATTGTAGGGAATCAGAGGAATCCATGGACCATAGTTTACTTCAGATTTCGAAGAAAATTGTTGGGAATCAGGAACTATGGACTATGGTTCACTCAGTCTAACAAGTTACTAGTGGAATCCCAGATGGCTAGATCTGGATTACTTACAGACAATGGTTCAGTGAATCAGTGGCATACTTTCCCTTGCAGACCAAAGTTAAAGCACATACAAGATCAGATGCAAGATGAGGTAAAAAAGATGATGTCTGTACAACTGCGCCCTCCCACTTCTGCCGGAGGTCGCTACTCGACAAGATCACAACCCCTACATCCCCAGAGGCCTCCAATCATCGCCTCCTGTAGTCCATTCGGTCGCATGGGCACTGGGATGGTTGCTCGGATAACCGCAGTGAGCACAGAATCTGTGTACAGCTTCCTGAGACATCATCTGGCAGCACTGGAACCATTCCTTGGCGCTTGCCCATATCCTGCATCATGAAGCTAGCGGCCATCTGACTGTTGATGGATCATCATGAAATCTTCACTTCCGACGAAGAATGAAGATGTAAAAATTGTCTTCGCATACGCCTGCTCCCCGTAGTTGATTGAGCATGCTTTGATTTTGGTTGTACATGTTATAGTTCTTTGTGAATTTCTGAGTAAAAGAAGATACTCTGGGAATTGGGCAGCTGATGATCATGACCCTCTTTCTGTACTTTACAATAAATCCTCCTTCCTAGTCTTGGTGGGCCAGGCTGAAATGTTGGATTCGTTGGGCTGGACCCAACTTATGTTAGTTGGACCAGATAATTAATTCATCAGCAATGCAA]




>consensus_1528#0
TTCATTCTAAAAAAAAAAGAAAAAAGAAAGGAAAAAGAAAGAAAGAAAGAGCATGGAGGC
GGAGGCGGCAATGGCGCCGGCGGCGGCGCCAGCGGCGGCGACAGGGGCGGTGCGGGTGGA
GAAGGTGAGGGGGAGGTCAGCGGTGACCAGGTGCTTCGCCAAGTACCCGCTCAAGCTCAT
CGCCCCCTCCAAGGCCGGGCGCGCGTCCTCCGGCGCCGCGTGGCTCTACGCCATCACCTA
CGGCGGCGGCATCGTCTCCGTGAGCCGCCGCATCGCCTCCTCTTCCTCCCCCGGATTGCA
ATCAACCAACCAACCAACAGTTTGCCTCCTTTCTCGAGAGAGAGGCAATCGTGAGTGCGA
GTGTCTGATGCGTTTTTGTTCTTCTTTTTTGGGGGCTGTGCTTGTAGGGGGACATCATCT
CCTGCACGGTGGCCGTCGGCGACGGGTGCGCGGCGGCGATGACCACGCAGGCCTCCACTA
AGGTCCTTTTTTCTTTCAATTGTTCTCATGCGATTGGCCGAGTAAATACTGTTTACATTT
CCTTAGTTGGAGAAAATGACATAGGTTAGTGAACGAATGTTTCTCATAAATGCTTACAGC
TAGAACACTTTTAGGGCCCCCCCCCCCCCCGTATTTTTTTTTCCTTTTTGAAAGAAGGGC
AAAATCTTTGCCAACTTTAGGGTCCCTTTTGAAATGATGGATTGTCATAAGAATTTTGAA
GGATTTAATCTTCTAAATGATTTTTTATTTCTATCGAGCCAAGGATAGAGAATATTCCAT
ATGAAGTAAGCAAGAGGCCCAACCTCTTGGAAACTTTCCTTTGCTTTGTTAGTTTCCTAT
GATGCTATCAAAGGGCTCCTCTTCATCTTTCCTGTGTTTTTCATTCCTGTAGGATTAGAG
AAACATGCAACTTCAATTCCTGCGTTTTTCCTATCCCGCGTTTCAAAGGGACCCTTAAAT
AATGTTACAGCTAGAGCTAGAGGGGTCTTGATGTCAATTCCATATAAGTGTAGGGTATGC
TATTAGAATTACCAAATGCAACCTAGGACTTAAACTAGTCTATTGTAATAACATGATATT
GGGCTTTGTGCGTCTTTGACACAGCAGCTGGGTTATAGCAATGCACCCGTAGTCAAGTGT
AATAACATACTTCATTATCGAAATTTTAACTGAAAAAAGTTAGTTCTTGAGGAATATATT
GATTTTTTTTAACGAACCATATATATTGATTGTTTTATGTTTGTCAATGGCCAAGTGCTT
GTTTAGGTGTACAAGGCCGTGGATTCAAAATGTTCTGAGCAGGTGCTAGAGGCAAGAGTT
GGAGAAGATGCACTCTTTGCACTTATTCCAGATCCTGTAACCTGCTTCTCAATGGCTCGA
TACCACCAGAAGCAAGTGTTTCATGTCTTTCCCAATTCAAACTTAGTCGTTGTAGACTGG
TTTACAAGTGGTCGTTACGAGAGTGGAGAAAAATGGAATTTCAGCTTCTACAAGAGCATC
AACCATATTCTTTTGGAAGATCAGCCTCTATTTATTGACTCGGTAAGAGCTCACCTTTCA
GCTTCTCCTAACATTTGCCTGATTAATCTTGTTCATCCCCACTCTAATCATCGGTTGTGC
TTAATGCCATGCCACATAACCTCTTCTAATGTCTGAGCAGGTTTTATTGGAACAGAGCTC
AAATTTTAGTATTGCTGACCGAATGCAGGAATACAATGTGGTTGCAATGGTTATTTTGCT
GGGGTAAGGCCATCAAACACTGAAATTTGCCTTCTGCACAGGTCTTCTCGACCTTTGCAG
ATATGACTTTGGCTACTGCCTATGTGCTGCTTCGGTTTTCACATAATCAACCGTGTTCTT
TTGTCTTTGGTAGTTACTACAATTATGCTAGTTGAGGATCTTTCAGAATTTCTAGAAAAT
TGTAGGGAATCAGAGGAATCCATGGACCATAGTTTACTTCAGATTTCGAAGAAAATTGTT
GGGAATCAGGAACTATGGACTATGGTTCACTCAGTCTAACAAGTTACTAGTGGAATCCCA
GATGGCTAGATCTGGATTACTTACAGACAATGGTTCAGTGAATCAGTGGCATACTTTCCC
TTGCAGACCAAAGTTAAAGCACATACAAGATCAGATGCAAGATGAGGTAAAAAAGATGAT
GTCTGTACAACTGCGCCCTCCCACTTCTGCCGGAGGTCGCTACTCGACAAGATCACAACC
CCTACATCCCCAGAGGCCTCCAATCATCGCCTCCTGTAGTCCATTCGGTCGCATGGGCAC
TGGGATGGTTGCTCGGATAACCGCAGTGAGCACAGAATCTGTGTACAGCTTCCTGAGACA
TCATCTGGCAGCACTGGAACCATTCCTTGGCGCTTGCCCATATCCTGCATCATGAAGCTA
GCGGCCATCTGACTGTTGATGGATCATCATGAAATCTTCACTTCCGACGAAGAATGAAGA
TGTAAAAATTGTCTTCGCATACGCCTGCTCCCCGTAGTTGATTGAGCATGCTTTGATTTT
GGTTGTACATGTTATAGTTCTTTGTGAATTTCTGAGTAAAAGAAGATACTCTGGGAATTG
GGCAGCTGATGATCATGACCCTCTTTCTGTACTTTACAATAAATCCTCCTTCCTAGTCTT
GGTGGGCCAGGCTGAAATGTTGGATTCGTTGGGCTGGACCCAACTTATGTTAGTTGGACC
AGATAATTAATTCATCAGCAATGCAA

consensusID : consensus_1528#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 700
fasta sequence

                              [GGCAATTCAAAACTTGGTCGTTGTAGACTGGTTTACAAGTGGTCGTTACGAGAGTGGAGAAAAATGGAATTTCAGCTTCTGCAAGAGCATCAACCATATTCTTTTGGAAGATCAGCCTCTATTTATTGACTCGGTTTTATTGGAACAGAGCTCAAATTTTAGTATTGCTGACCGAATGCAGGAATACAATGTGGTTGCAATGGTTATTTTGCTGGGACCAAAGTTAAAGCCCATACAAGATTAGATGCAAGATGAGGTAAAAAAGATGATGTCTGTACAACTGCGCCCTCCCACTTCTGCCGGAGGTCGCTACTCGNCAAGATCTCAAACCCCCTACATCCCCAAAGGCCTCCAATCATCGCCTCCTGTAGTCCATTCGGTCGCATGGGCACTGGGATGGTTGCTTGGATAACCGCAGTGAGCACAGAATCTGTGTACAGCTTCCTGAGACATCATCTGGCAGCACTGGAACCATTCCTTGGCGCTTGCCCATATCCTGCATCATGAAGCTAGCGGCCATCTGACTGTTGATGGATCATCATGAAATCTTCACTTCCGACGAAGAATGAAGATGTAAAAATTGTTTTTGCATACGCCTGCTCCTTGTAGTTGATTGAGCATGCTTTGATTTTGGTTGTACAGGTTATAGTTCTTTGTGAATTTTTGAGTAAAAGAAGATACTCTGGGAAAAAAAAAAAAA]

[-] EMBL CA760586             [GGCAATTCAAAACTTGGTCGTTGTAGACTGGTTTACAAGTGGTCGTTACGAGAGTGGAGAAAAATGGAATTTCAGCTTCTGCAAGAGCATCAACCATATTCTTTTGGAAGATCAGCCTCTATTTATTGACTCGGTTTTATTGGAACAGAGCTCAAATTTTAGTATTGCTGACCGAATGCAGGAATACAATGTGGTTGCAATGGTTATTTTGCTGGGACCAAAGTTAAAGCCCATACAAGATTAGATGCAAGATGAGGTAAAAAAGATGATGTCTGTACAACTGCGCCCTCCCACTTCTGCCGGAGGTCGCTACTCGNCAAGATCTCAAACCCCCTACATCCCCAAAGGCCTCCAATCATCGCCTCCTGTAGTCCATTCGGTCGCATGGGCACTGGGATGGTTGCTTGGATAACCGCAGTGAGCACAGAATCTGTGTACAGCTTCCTGAGACATCATCTGGCAGCACTGGAACCATTCCTTGGCGCTTGCCCATATCCTGCATCATGAAGCTAGCGGCCATCTGACTGTTGATGGATCATCATGAAATCTTCACTTCCGACGAAGAATGAAGATGTAAAAATTGTTTTTGCATACGCCTGCTCCTTGTAGTTGATTGAGCATGCTTTGATTTTGGTTGTACAGGTTATAGTTCTTTGTGAATTTTTGAGTAAAAGAAGATACTCTGGGAAAAAAAAAAAAA]




>consensus_1528#1
GGCAATTCAAAACTTGGTCGTTGTAGACTGGTTTACAAGTGGTCGTTACGAGAGTGGAGA
AAAATGGAATTTCAGCTTCTGCAAGAGCATCAACCATATTCTTTTGGAAGATCAGCCTCT
ATTTATTGACTCGGTTTTATTGGAACAGAGCTCAAATTTTAGTATTGCTGACCGAATGCA
GGAATACAATGTGGTTGCAATGGTTATTTTGCTGGGACCAAAGTTAAAGCCCATACAAGA
TTAGATGCAAGATGAGGTAAAAAAGATGATGTCTGTACAACTGCGCCCTCCCACTTCTGC
CGGAGGTCGCTACTCGNCAAGATCTCAAACCCCCTACATCCCCAAAGGCCTCCAATCATC
GCCTCCTGTAGTCCATTCGGTCGCATGGGCACTGGGATGGTTGCTTGGATAACCGCAGTG
AGCACAGAATCTGTGTACAGCTTCCTGAGACATCATCTGGCAGCACTGGAACCATTCCTT
GGCGCTTGCCCATATCCTGCATCATGAAGCTAGCGGCCATCTGACTGTTGATGGATCATC
ATGAAATCTTCACTTCCGACGAAGAATGAAGATGTAAAAATTGTTTTTGCATACGCCTGC
TCCTTGTAGTTGATTGAGCATGCTTTGATTTTGGTTGTACAGGTTATAGTTCTTTGTGAA
TTTTTGAGTAAAAGAAGATACTCTGGGAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1528#0      TTCATTCTAAAAAAAAAAGAAAAAAGAAAGGAAAAAGAAAGAAAGAAAGAGCATGGAGGC 60
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      GGAGGCGGCAATGGCGCCGGCGGCGGCGCCAGCGGCGGCGACAGGGGCGGTGCGGGTGGA 120
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      GAAGGTGAGGGGGAGGTCAGCGGTGACCAGGTGCTTCGCCAAGTACCCGCTCAAGCTCAT 180
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      CGCCCCCTCCAAGGCCGGGCGCGCGTCCTCCGGCGCCGCGTGGCTCTACGCCATCACCTA 240
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      CGGCGGCGGCATCGTCTCCGTGAGCCGCCGCATCGCCTCCTCTTCCTCCCCCGGATTGCA 300
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      ATCAACCAACCAACCAACAGTTTGCCTCCTTTCTCGAGAGAGAGGCAATCGTGAGTGCGA 360
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      GTGTCTGATGCGTTTTTGTTCTTCTTTTTTGGGGGCTGTGCTTGTAGGGGGACATCATCT 420
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      CCTGCACGGTGGCCGTCGGCGACGGGTGCGCGGCGGCGATGACCACGCAGGCCTCCACTA 480
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      AGGTCCTTTTTTCTTTCAATTGTTCTCATGCGATTGGCCGAGTAAATACTGTTTACATTT 540
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      CCTTAGTTGGAGAAAATGACATAGGTTAGTGAACGAATGTTTCTCATAAATGCTTACAGC 600
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      TAGAACACTTTTAGGGCCCCCCCCCCCCCCGTATTTTTTTTTCCTTTTTGAAAGAAGGGC 660
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      AAAATCTTTGCCAACTTTAGGGTCCCTTTTGAAATGATGGATTGTCATAAGAATTTTGAA 720
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      GGATTTAATCTTCTAAATGATTTTTTATTTCTATCGAGCCAAGGATAGAGAATATTCCAT 780
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      ATGAAGTAAGCAAGAGGCCCAACCTCTTGGAAACTTTCCTTTGCTTTGTTAGTTTCCTAT 840
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      GATGCTATCAAAGGGCTCCTCTTCATCTTTCCTGTGTTTTTCATTCCTGTAGGATTAGAG 900
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      AAACATGCAACTTCAATTCCTGCGTTTTTCCTATCCCGCGTTTCAAAGGGACCCTTAAAT 960
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      AATGTTACAGCTAGAGCTAGAGGGGTCTTGATGTCAATTCCATATAAGTGTAGGGTATGC 1020
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      TATTAGAATTACCAAATGCAACCTAGGACTTAAACTAGTCTATTGTAATAACATGATATT 1080
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      GGGCTTTGTGCGTCTTTGACACAGCAGCTGGGTTATAGCAATGCACCCGTAGTCAAGTGT 1140
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      AATAACATACTTCATTATCGAAATTTTAACTGAAAAAAGTTAGTTCTTGAGGAATATATT 1200
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      GATTTTTTTTAACGAACCATATATATTGATTGTTTTATGTTTGTCAATGGCCAAGTGCTT 1260
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      GTTTAGGTGTACAAGGCCGTGGATTCAAAATGTTCTGAGCAGGTGCTAGAGGCAAGAGTT 1320
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      GGAGAAGATGCACTCTTTGCACTTATTCCAGATCCTGTAACCTGCTTCTCAATGGCTCGA 1380
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      TACCACCAGAAGCAAGTGTTTCATGTCTTTCCCAATTCAAACTTAGTCGTTGTAGACTGG 1440
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      TTTACAAGTGGTCGTTACGAGAGTGGAGAAAAATGGAATTTCAGCTTCTACAAGAGCATC 1500
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      AACCATATTCTTTTGGAAGATCAGCCTCTATTTATTGACTCGGTAAGAGCTCACCTTTCA 1560
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      GCTTCTCCTAACATTTGCCTGATTAATCTTGTTCATCCCCACTCTAATCATCGGTTGTGC 1620
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      TTAATGCCATGCCACATAACCTCTTCTAATGTCTGAGCAGGTTTTATTGGAACAGAGCTC 1680
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      AAATTTTAGTATTGCTGACCGAATGCAGGAATACAATGTGGTTGCAATGGTTATTTTGCT 1740
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      GGGGTAAGGCCATCAAACACTGAAATTTGCCTTCTGCACAGGTCTTCTCGACCTTTGCAG 1800
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      ATATGACTTTGGCTACTGCCTATGTGCTGCTTCGGTTTTCACATAATCAACCGTGTTCTT 1860
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      TTGTCTTTGGTAGTTACTACAATTATGCTAGTTGAGGATCTTTCAGAATTTCTAGAAAAT 1920
consensus_1528#1      -----------GGCAATTCAAAACTTGGTCGTTGTAGACT------GGTTTACAAGTGGT 43
                                  *  * *  **   ** * ****  **          ***  *     *

consensus_1528#0      TGTAGGGAATCAGAGGAATCCATGGACCATAGTTTACTTCAGATTTCGAAGAAAATTGTT 1980
consensus_1528#1      CGTTACGAGAGTGGAGAAAAATGGAATTTCAGCTTCTGCAAGAGCATCAACCATATTCTT 103
                       **   **    *  ***     * *    ** **     ***     **  * *** **

consensus_1528#0      GGGAATCAGGAACTATGGACTATGGTTCACTCAGTCTAACAAGTTACTAGTGGAATCCCA 2040
consensus_1528#1      TTGGAAGATCAGCCTCTATTTATTG---ACTCGGTTTTATTGG-----AACAGAG-CTCA 154
                        * *  *  * *       *** *   **** ** * *   *     *   **  * **

consensus_1528#0      GATGGCTAGATCTGGATTACTTACAGACAATGGTTCAGTGAATCAGTGGCATACTTTCCC 2100
consensus_1528#1      AAT--TTTAGTATTGCTGACCGA-ATGCAGGAATACAATGTGGTTGCAATGGTTATTTTG 211
                       **   *   * * * * **  * *  **    * ** **     *         **   

consensus_1528#0      TTGCAGACCAAAGTTAAAGCACATACAAGATCAGATGCAAGATGAGGTAAAAAAGATGAT 2160
consensus_1528#1      CTG-GGACCAAAGTTAAAGCCCATACAAGATTAGATGCAAGATGAGGTAAAAAAGATGAT 270
                       **  *************** ********** ****************************

consensus_1528#0      GTCTGTACAACTGCGCCCTCCCACTTCTGCCGGAGGTCGCTACTCGACAAGATCACAA-- 2218
consensus_1528#1      GTCTGTACAACTGCGCCCTCCCACTTCTGCCGGAGGTCGCTACTCGNCAAGATCTCAAAC 330
                      ********************************************** ******* ***  

consensus_1528#0      CCCCTACATCCCCAGAGGCCTCCAATCATCGCCTCCTGTAGTCCATTCGGTCGCATGGGC 2278
consensus_1528#1      CCCCTACATCCCCAAAGGCCTCCAATCATCGCCTCCTGTAGTCCATTCGGTCGCATGGGC 390
                      ************** *********************************************

consensus_1528#0      ACTGGGATGGTTGCTCGGATAACCGCAGTGAGCACAGAATCTGTGTACAGCTTCCTGAGA 2338
consensus_1528#1      ACTGGGATGGTTGCTTGGATAACCGCAGTGAGCACAGAATCTGTGTACAGCTTCCTGAGA 450
                      *************** ********************************************

consensus_1528#0      CATCATCTGGCAGCACTGGAACCATTCCTTGGCGCTTGCCCATATCCTGCATCATGAAGC 2398
consensus_1528#1      CATCATCTGGCAGCACTGGAACCATTCCTTGGCGCTTGCCCATATCCTGCATCATGAAGC 510
                      ************************************************************

consensus_1528#0      TAGCGGCCATCTGACTGTTGATGGATCATCATGAAATCTTCACTTCCGACGAAGAATGAA 2458
consensus_1528#1      TAGCGGCCATCTGACTGTTGATGGATCATCATGAAATCTTCACTTCCGACGAAGAATGAA 570
                      ************************************************************

consensus_1528#0      GATGTAAAAATTGTCTTCGCATACGCCTGCTCCCCGTAGTTGATTGAGCATGCTTTGATT 2518
consensus_1528#1      GATGTAAAAATTGTTTTTGCATACGCCTGCTCCTTGTAGTTGATTGAGCATGCTTTGATT 630
                      ************** ** ***************  *************************

consensus_1528#0      TTGGTTGTACATGTTATAGTTCTTTGTGAATTTCTGAGTAAAAGAAGATACTCTGGGAAT 2578
consensus_1528#1      TTGGTTGTACAGGTTATAGTTCTTTGTGAATTTTTGAGTAAAAGAAGATACTCTGGGAAA 690
                      *********** ********************* ************************* 

consensus_1528#0      TGGGCAGCTGATGATCATGACCCTCTTTCTGTACTTTACAATAAATCCTCCTTCCTAGTC 2638
consensus_1528#1      AAAAAAAAAA-------------------------------------------------- 700
                           *                                                      

consensus_1528#0      TTGGTGGGCCAGGCTGAAATGTTGGATTCGTTGGGCTGGACCCAACTTATGTTAGTTGGA 2698
consensus_1528#1      ------------------------------------------------------------
                                                                                  

consensus_1528#0      CCAGATAATTAATTCATCAGCAATGCAA 2726
consensus_1528#1      ----------------------------