These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15294#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 863 fasta sequence [TTTTTAAGGCTGGGGCAACCAAAAGAGGCATTTAATTGATGTAAAATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTGGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAACAAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACCAAGTTGGTTGATAATTGATGGCAGCAGATCCTGCAGCTTCTTTGTTTGTGGAGTTCCACTGACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAGTGCCAGGGATGGGTGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACCTGCCATCTTCTTGAGCTTGTCAACATTCATCTTCTATAGCGATTCCCCTCACGAAAACCACCTCGAACGATTGCCGGAGACGCGTCGCCCCAGGCCAAATCTTGCAGAGGCTCGCCTACCTTGGCTGTGGGGAGGAGGGGGAGCCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAA] [+] EMBL CF297813 [TTTTTAAGGCTGGGGCAACCAAAAGAGGCATTTAATTGATGTAAAATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTGGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAACAAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACCAAGTTGGTTGATAATTGATGGCAGCAGATCCTGCAGCTTCTTTGTTTGTGGAGTTCCACTGACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAGTGCCAGGGATGGGTGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACCTGC ] [-] EMBL CF278681 [ CACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACCAAGTTGGTTGATAATTGATGGCAGCAGATCCTGCAGCTTCTTTGTTTGTGGAGTTCCACTGACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAATGCCAGGGAT GGTGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACCTGCCATCTTCTTGAGCTTGTCAACATTCATCTTCTATAGCGATTCCCCTCACGAAAACCACCTCGAACGATTGCCGGAGACGCGTCGCCCCAGGCCAAATCTTGCAGAGGCTCGCCTACCTTGGCTGTGGGGAGGAGGGGGAGCCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAA] consensusID : consensus_15294#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 810 fasta sequence [TTTTTTTTTTTGGGGCAACCAAAAGAGGCATTTAATTGATGTAAA-ATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAAC-AAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC-AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC-AGCTTCTTTG-TTTGTGGAGTTCCACTGACAA-CCCATGTATTAGCA-CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC-TTCAATGCCA-GGGATGGTGTTTACTCCTACTC-TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT-ACCCTTCCCCCC-GGTGCGCACAGCACCTGCCATCTTCTT-GAGCTT-GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG-CCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAAGAAGACTCGGGGAGAGGAAAAGGATAGGGCTCTAGGG] [-] EMBL AU182079 [TTTTTTTTTTTGGGGCAACCAAAAGAGGCATTTAATTGATGTAAA ATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAAC AAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCAC ] [-] EMBL AU101039 [TTTTTTTTTTTGGGGCAACCAAAAGAGGCATTTAATTGATGTAAA ATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAAC AAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCAGGGGATGGTGTTTACTCCTACTCTTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGNTGTAGTCTTATGGNCTGCCTTCTTCTTTCTGGGGACGGTAACCCTTCCCCCCGGGGGCGCACAGNACCTGCCATCTTCTTGGAGCTTGGTCAACATTC ] [+] EMBL CF278682 [ TTTTTTTTTGGGGCAACCAAATTATGCATTTAATTGATGTAAA ATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAAC AAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGC ] [+] EMBL CF329487 [ TTTTTTTTGGGGCAACCGAAAGAAGCATTTAATTGATGTAAATATTTCACCATCATACCGGACCAAATTCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCATAGGTTTTTAAGAGCGGAGGTTTCTAATGGCAATTCACAGCTTATAATCCTTCACAAGAGAACACATGCAAC AAAATCATGAATCCTTTTTCTGTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAACTCCAGCACTGGCACCAGCCTCTTGACCATAAGCACCATGAACCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCACGACC AAGATGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGA ] [+] EMBL BI306249 [ AAAAGAGGCATTTAATTGATGTAAA ATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAAAGGTTTTTAAAAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAAC AAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCA ] [+] EMBL CB964576 [ AAAAGAGGCATTTAATTGATGTAAA ATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAAC AAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGGCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCGACATTCA ] [-] EMBL AK121674 [ AAAGAGGCATTTAATTGATGTAAA ATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAAC AAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG CCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATA ] [-] EMBL CB000945 [ TTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAAC AAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCT ] [-] EMBL BF430577 [ AGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCACCAAAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG CC GCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAAGAAGACTCGGGGAG ] [-] EMBL CF297812 [ ACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAGTGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG CCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAGGAAGACTCtttctactc ] [-] EMBL CF299375 [ ACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGCTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG CCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAAGAAGACTCGGGGAGAGGAAAAGGATAGGGCTCTAGGG] [-] EMBL CF324702 [ CGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG CCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAAGAAGA ] [-] EMBL CF291144 [ GTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG CCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAG ] [-] EMBL AU069607 [ CCCCCGNAGATTATCCAAAGTGTCAGGNCCAAAGTTGGTTGATAATTGATGGCAGNAGATCCTGCAAGCTTCTTTGNTTTGTGGAGTCCTACTGACAACCCCATGTATTAGCACCCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCAC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGTGNGNNCGCGGCGGCGGCGGCGGAGGCGGCGGNGNNGTGGGAGGAGAGGATAGGGGGAGTGGACGAAGAcgg ] [-] EMBL AU069214 [ CACTTTA GATTCAGAAACTGAAT ACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG CCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGA ] [-] EMBL CF339399 [ TCAGTAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC AGAGAAAACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG CCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAAGAAGACTCGGGGAGAGGAAAAGGATAGGGC ] consensusID : consensus_15294#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 341 fasta sequence [TGATGGCGGCGTTCCTCAGGGGAGCTATGTGCAGGACCAAGTTGGTTGATAATTGATGGCAGCAGATCCTGCAGCTTCTTTGTTTGTGGAGTTCCACTGACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAATGCCAGGGATGGTGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACCTGCCATCTTCTTGAGCTTGTC] [-] EMBL AY224531 [TGATGGCGGCGTTCCTCAGGGGAGCTATGTGCAGGACCAAGTTGGTTGATAATTGATGGCAGCAGATCCTGCAGCTTCTTTGTTTGTGGAGTTCCACTGACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAATGCCAGGGATGGTGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACCTGCCATCTTCTTGAGCTTGTC] consensusID : consensus_15294#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 222 fasta sequence [CTCCCCCTATCCTCTCCTCCCACCGCGCCGCCGCCTCCGCGCCGCCGCCGCGCTCCCCCTCCTCCCCACAGCCAAGATGAATGTTGACAAGCTCAAGAAGATGGAGGTGCTGTGCGACCGGGGGAAGGGTAGCGTGCGAGAAGAAGAGGAGTCCATAAGCTAAACCACAGTGCAAAGCTTAGAGACTCTNAAAGAGAGGGTAACACATCCTGGATTNAGAGN] [+] EMBL C29156 [CTCCCCCTATCCTCTCCTCCCACCGCGCCGCCGCCTCCGCGCCGCCGCCGCGCTCCCCCTCCTCCCCACAGCCAAGATGAATGTTGACAAGCTCAAGAAGATGGAGGTGCTGTGCGACCGGGGGAAGGGTAGCGTGCGAGAAGAAGAGGAGTCCATAAGCTAAACCACAGTGCAAAGCTTAGAGACTCTNAAAGAGAGGGTAACACATCCTGGATTNAGAGN] consensusID : consensus_15294#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 77 fasta sequence [AGCTGGTGGTGAATACGCTGGCGCCAGTGCTGGAGCTGCTCACGGTGACGATGATGATGTTCCTGAGCTTGTCCCTG] [+] EMBL CF309913 [AGCTGGTGGTGAATACGCTGGCGCCAGTGCTGGAGCTGCTCACGGTGACGATGATGATGTTCCTGAGCTTGTCCCTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15294#0 TTTTTAAGGCTGGGGCAACCAAAAGAGGCATTTAATTGATGTAAAATTCCACCAACATAC 60 consensus_15294#2 ------------------------------------------------------------ consensus_15294#1 TTTTTTTTTTTGGGGCAACCAAAAGAGGCATTTAATTGATGTAAAATTCCACCAACATAC 60 consensus_15294#4 ------------------------------------------------------------ consensus_15294#3 ------------------------------------------------------------ consensus_15294#0 CGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTGGGTCAGAGG 120 consensus_15294#2 ------------------------------------------------------------ consensus_15294#1 CGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAGAGG 120 consensus_15294#4 ------------------------------------------------------------ consensus_15294#3 ------------------------------------------------------------ consensus_15294#0 TTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGA 180 consensus_15294#2 ------------------------------------------------------------ consensus_15294#1 TTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGA 180 consensus_15294#4 ------------------------------------------------------------ consensus_15294#3 ------------------------------------------------------------ consensus_15294#0 CATGCAACAAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGG 240 consensus_15294#2 ------------------------------------------------------------ consensus_15294#1 CATGCAACAAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGG 240 consensus_15294#4 ------------------------------------------------------------ consensus_15294#3 ------------------------------------------------------------ consensus_15294#0 GACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTC 300 consensus_15294#2 ------------------------------------------------------------ consensus_15294#1 GACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTC 300 consensus_15294#4 ------------------------------------------------------------ consensus_15294#3 ------------------------------------------------------------ consensus_15294#0 TTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATC 360 consensus_15294#2 ----------------------------------TGATG-GCGGCGTTCCTCAGGGGAGC 25 consensus_15294#1 TTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATC 360 consensus_15294#4 ------------------------------------------------------------ consensus_15294#3 --CTCCCCCTATCCTCTCCTCCCACCGCGCCGCCGCCTCCGCGCCGCCGCCGCGCTCCCC 58 consensus_15294#0 CAAGTTGTCAGGACCAAGTTGGTTGATAAT-TGATGGCAGCAGATCCTGCAGCTTCTTTG 419 consensus_15294#2 TATGTG--CAGGACCAAGTTGGTTGATAAT-TGATGGCAGCAGATCCTGCAGCTTCTTTG 82 consensus_15294#1 CAAGTTGTCAGGACCAAGTTGGTTGATAAT-TGATGGCAGCAGATCCTGCAGCTTCTTTG 419 consensus_15294#4 ----------------AGCTGGTGGTGAATACGCTGGCGCCAG-TGCTGGAGCTGCTCAC 43 consensus_15294#3 CTCCTCCCCACAGCCAAGATGAATGTTGACAAGCTCA-AGAAGATGGAGGTGCTGTGCGA 117 ** ** * * * * ** * * *** consensus_15294#0 TTTGTGGAGTTCCACTG-ACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGA 478 consensus_15294#2 TTTGTGGAGTTCCACTG-ACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGA 141 consensus_15294#1 TTTGTGGAGTTCCACTG-ACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGA 478 consensus_15294#4 GGTGACGA----TGATG-ATGTTCC-TGAGCTTGTCCCTG-------------------- 77 consensus_15294#3 CCGGGGGAAGGGTAGCGTGCGAGAAGAAGAGGAGTCCATAAGCTAAACCACAGTGCAAAG 177 * ** * * * consensus_15294#0 TTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAGTGCCAGGGATG 538 consensus_15294#2 TTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAATGCCAGGGATG 201 consensus_15294#1 TTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAATGCCAGGGATG 538 consensus_15294#4 ------------------------------------------------------------ consensus_15294#3 CTTAGAGACTCTNAAAGAGAGGGTAACACATCCTGGATTNAGAGN--------------- 222 consensus_15294#0 GGTGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGT 598 consensus_15294#2 G-TGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGT 260 consensus_15294#1 G-TGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGT 597 consensus_15294#4 ------------------------------------------------------------ consensus_15294#3 ------------------------------------------------------------ consensus_15294#0 CTTATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACC 658 consensus_15294#2 CTTATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACC 320 consensus_15294#1 CTTATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACC 657 consensus_15294#4 ------------------------------------------------------------ consensus_15294#3 ------------------------------------------------------------ consensus_15294#0 TGCCATCTTCTTGAGCTTGTCAACATTCATCTTCTATAGCGATTCCCCTCACGAAAACCA 718 consensus_15294#2 TGCCATCTTCTTGAGCTTGTC--------------------------------------- 341 consensus_15294#1 TGCCATCTTCTTGAGCTTGTCAACATTCATCT----TGGCTGTGGGGAGGAGGGGGAGCC 713 consensus_15294#4 ------------------------------------------------------------ consensus_15294#3 ------------------------------------------------------------ consensus_15294#0 CCTCGAACGATTGCCGGAGACGCGTCGCCCCAGGCCAAATCTTGCAGAGGCTCGCCTACC 778 consensus_15294#2 ------------------------------------------------------------ consensus_15294#1 GCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAA 773 consensus_15294#4 ------------------------------------------------------------ consensus_15294#3 ------------------------------------------------------------ consensus_15294#0 TTGGCTGTGGGGAGGAGGGGGAGCCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGA 838 consensus_15294#2 ------------------------------------------------------------ consensus_15294#1 GAAGACTCGGGGAGAGGAAAAGGATAGGGCTCTAGGG----------------------- 810 consensus_15294#4 ------------------------------------------------------------ consensus_15294#3 ------------------------------------------------------------ consensus_15294#0 GGAGAGGATAGGGGGAGTGGACGAA 863 consensus_15294#2 ------------------------- consensus_15294#1 ------------------------- consensus_15294#4 ------------------------- consensus_15294#3 ------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||