These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15349#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1461 fasta sequence [GACTGTAGCTGCTGCCCCGACGCGCTGCTCGCTGCCCCACTCTCTCCCCATTCCCCTCCACGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCATGCTTTCTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT-CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA-TGGGTGCTAATCCA-GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA-GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA-CTGGTAAGATGTTCTGATTGCTATGCTCCA-AAATTGCTTCCA-TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA-GAGTATTCGCCTCAATTTGTACGACAAAATTCAAAGCAGATGGTTAATGTAAAA-CACTGTTTGTTATATTTAAAGAATAAAGCATATA-TTTCTG-CCA-TTGGAAATAAAGG-TTTATATACATTTGATGTAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK071811 [GACTGTAGCTGCTGCCCCGACGCGCTGCTCGCTGCCCCACTCTCTCCCCATTCCCCTCCACGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCATGCTTTCTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCCA AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTCAATTTGTACGACAAAATTCAAAGCAGATGGTTAATGTAAAA CACTGTTTGTTATATTTAAAGAATAAAGCATATA TTTC ] [+] EMBL CB653633 [ TCCACGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAA ] [+] EMBL OSS2181A [ CCACGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGG ACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGTGCAGGGCGTTG ] [+] EMBL CB646525 [ CCACGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCAT ] [+] EMBL CB629871 [ CGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGCCGCCTCCACCGCCGGGAAGATCGGGAGCTCCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCGGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCA ] [+] EMBL CB639053 [ CCGGAGTTCCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGATGTGTTTATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTC AAAGAAGAAT TGGAAAAATTGGCA ] [+] EMBL CB660261 [ TTCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCATGCTTTCTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGAT ] [+] EMBL CF306682 [ TCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCA ] [-] EMBL CB646526 [ TCTAGGAACTGGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCATGCTTTCTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCCA AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTCAATTTGTACGACAAAATTCAAAGCAGATGGTTAATGTAAAA CACTGTTTGTTATATTTAAAGAATAAAGCATATA TTTC ] [-] EMBL CB653634 [ AAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCATGCTTTCTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCCA AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTCAATTTGTACGACAAAATTCAAAGCAGATGGTTAATGTAAAA CACTGTTTGTTATATTTAAAGAATAAAGCATATA TTTCTG CCA AAAAAAAAAAAGG ] [-] EMBL CB660262 [ GGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCATGCTTTCTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCCCAGGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT CCAGTTTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCCA AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTTTAAAAAGGAGTATTCGCCTCAATTTGTACGACAAAATTCAAAGCAGAGGGTTAATGTAAAACCACTGTTTGTTATATTTAAAGAAAAGGGCATAT ] [-] EMBL CB639052 [ AGG ATAGGTCCATGCTTTCTCTGTNTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCCA AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTCAATTTGTACGACAAAATTCAAAGCAGATGGTTAATGTAAAA CACTGTTTGTTATATTTAAAGAATAAAGCATATA TTTCTG CCATTTGGAAA ] [-] EMBL CB639062 [ atagGTCCATGCTTTCTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCCA AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTCAATTTGTACGACAAAATTCAAAGCAGATGGTTAATGTAAAA CACTGTTTGTTATATTTAAAGAATAAAGCATA A TTTCTG CCAaaaaaaa ] [+] EMBL CB096846 [ TCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCCA AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTCAATTTGTACGACAAAATTCAAAGCAGATGGNTAATGTAAAA CACTGTTCGTTATATTTAAAGAATAAAGCATATATTTTCTG CCATTTGGAAATAAAGGNTTTATATACATTTGATGTAA ] [+] EMBL BI801518 [ AACATTGAAAATGCTAAGGGCTTA GTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCC AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTC ATTTGTACGAC AAATTC AAGCAGATGGTTAATGTAAAA CCCTGTTTGTTATATTTAAAGAATAAAGCATATA TTTCTG CCAaaa ] [+] EMBL BI813040 [ GGCTTAGGTTAT CCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGC ACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAA GGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCC AAATTGCTTCCACTTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTC ATTTGTACGACAAAATTC AAGCAGATGGTTAATGTAAAA C CTGTTTGTTATATTTAAAGAATAAAGCATATA TTTCTG CCATTTGGAAATAAAGG TTTATATACATTTGATGTAAAAA ] [+] EMBL BI807367 [ ACAGC ACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACACTGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACACGGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCCAAGATGGAACCTGGTAAGATGTTCTGATTGCTATGCTCCACAAATTGCTTCCACTTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTCAATTTGTACGACAAAATTC AAGCAGATGGTTAATGTAAAA C CTGTTTGTTATATTTAAAGAATAAAGCATATA TTTCTG CCATTTGGAAATAAAGG TTTATATACATTTGATGTAAAAAAAAAAA ] [+] EMBL BM421486 [ TTGTCCTTGATGCCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCAGGCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGC AAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCCC NAATTGCTTCCACTTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTC ATTTGTACGAC AAATTCAAAGCAGATGGTTAATGTAAAA C CTGTTTGTTATATTTAAAGAATAAAGCATATA TTTCTGCCCT TTGGAAATAAAGG TTTATATACATTTGATGTAAAAA ] [+] EMBL AU097103 [ ATGTTCTGATTGCTATGCTCCA AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTCAATTTGTACGACAAAATTCNAAGCAGATGGTTAATGTAAAA CACTGTTTGTTATATTTAAAGAATAAAGCATATA TTTCTG CCATTTGGAAATAAAGG TTTATATACATTTGATGTAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_15349#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 623 fasta sequence [GAGTTTCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGTATTGTTTTCTGTTCAATCCTAACTATTGAACCATT] [+] EMBL CB639051 [GAGTTTCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGTATTGTTTTCTGTTCAATCCTAACTATTGAACCATT] consensusID : consensus_15349#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 243 fasta sequence [CCACGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGNCGACTNCGNCGNNGGNAAGATCGGNAGCTTCCTCTCCAAGAGGCCGTACGCGNCGCCGTCCTGGGCCTCGCACCTGTCCCCCGNCCNCTNGCAGACCTTCTNGNTCGGCCATTTCCCGACGTCGATCCANAAGTNGAATNTNNCCAATTTGNCGAATNGACTGGNGGTTTNTGTTCAAGTTANATGANATATTATGCA] [+] EMBL OSS2203A [CCACGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGNCGACTNCGNCGNNGGNAAGATCGGNAGCTTCCTCTCCAAGAGGCCGTACGCGNCGCCGTCCTGGGCCTCGCACCTGTCCCCCGNCCNCTNGCAGACCTTCTNGNTCGGCCATTTCCCGACGTCGATCCANAAGTNGAATNTNNCCAATTTGNCGAATNGACTGGNGGTTTNTGTTCAAGTTANATGANATATTATGCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15349#0 GACTGTAGCTGCTGCCCCGACGCGCTGCTCGCTGCCCCACTCTCTCCCCATTCCCCTCCA 60 consensus_15349#1 ------------------------------------------------------------ consensus_15349#2 ---------------------------------------------------------CCA 3 consensus_15349#0 CGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGCCGCCTCCGCCGCCGGGAA 120 consensus_15349#1 --------------------------------GAGTTTCCGCCGCCTCCGCCGCCGGGAA 28 consensus_15349#2 CGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGNCGACTNCGNCGNNGGNAA 63 ********* ** ** ** ** ** ** consensus_15349#0 GATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTC 180 consensus_15349#1 GATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTC 88 consensus_15349#2 GATCGGNAGCTTCCTCTCCAAGAGGCCGTACGCGNCGCCGTCCTGGGCCTCGCACCTGTC 123 ****** *************************** ************************* consensus_15349#0 CCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAA 240 consensus_15349#1 CCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAA 148 consensus_15349#2 CCCCGNCCNCTNGCAGACCTTCTNGNTCGGCCATTTCCCGACGTCGATCCANAAGTNGAA 183 ***** ** ** *********** * ***************** ******* **** *** consensus_15349#0 TCTGCCCAATTTGCCGAATGGCACGGAGGTGTG-GATCAAGCGAGACGACATCTCAGGCA 299 consensus_15349#1 TCTGCCCAATTTGCCGAATGGCACGGAGGTGTG-GATCAAGCGAGACGACATCTCAGGCA 207 consensus_15349#2 TNTNNCCAATTTGNCGAATNGACTGGNGGTTTNTGTTCAAGTTANATGANATATTATGCA 243 * * ******** ***** * ** *** * * ***** * * ** ** * * *** consensus_15349#0 TGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGC 359 consensus_15349#1 TGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGC 267 consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 AGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCG 419 consensus_15349#1 AGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCG 327 consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 CAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTC 479 consensus_15349#1 CAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTC 387 consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 TTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGC 539 consensus_15349#1 TTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGC 447 consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 ATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACT 599 consensus_15349#1 ATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACT 507 consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 TGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGAT 659 consensus_15349#1 TGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGAT 567 consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 CAAACTCTCTAGGAACTTGGGGATATATAGAAG-CAATAAGGGAGATTGAAC-ATCAAAT 717 consensus_15349#1 CAAACTCTCTAGGAACTTGGTATTGTTTTCTGTTCAATCCTAACTATTGAACCATT---- 623 consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 TCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAAC 777 consensus_15349#1 ------------------------------------------------------------ consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 CATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCATGCTTT 837 consensus_15349#1 ------------------------------------------------------------ consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 CTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACT 897 consensus_15349#1 ------------------------------------------------------------ consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 TCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTA 957 consensus_15349#1 ------------------------------------------------------------ consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 TGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCAT 1017 consensus_15349#1 ------------------------------------------------------------ consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 TGTCCTTGATCCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACATGGGTGC 1077 consensus_15349#1 ------------------------------------------------------------ consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 TAATCCAGCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACAGGTGGTCTTCTTGG 1137 consensus_15349#1 ------------------------------------------------------------ consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 TTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCT 1197 consensus_15349#1 ------------------------------------------------------------ consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 TGAAGAATCTGTTCCACGCAAAGATGGAACTGGTAAGATGTTCTGATTGCTATGCTCCAA 1257 consensus_15349#1 ------------------------------------------------------------ consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 AATTGCTTCCATTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAAGAGTATTCGCC 1317 consensus_15349#1 ------------------------------------------------------------ consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 TCAATTTGTACGACAAAATTCAAAGCAGATGGTTAATGTAAAACACTGTTTGTTATATTT 1377 consensus_15349#1 ------------------------------------------------------------ consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 AAAGAATAAAGCATATATTTCTGCCATTGGAAATAAAGGTTTATATACATTTGATGTAAA 1437 consensus_15349#1 ------------------------------------------------------------ consensus_15349#2 ------------------------------------------------------------ consensus_15349#0 AAAAAAAAAAAAAAAAAAAAAAAA 1461 consensus_15349#1 ------------------------ consensus_15349#2 ------------------------ 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Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||