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Oryza sativa
cluster # 1535 cluster # 1535       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1535#0 length = 1265 sequences # 2  

consensusID : consensus_1535#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1265
fasta sequence
                              [CGAGTAGGGCTTCCTCCTTCTTGCTGCTTTCGGCTGCTGCTTCCGCGCCATCCATCCTAGTGACCACATCCTCCGCCACCGCCGATCCCCATCCATCGCGCGAGCATGGTCGCCGTCGCTCGTCCTGCTGCTTCCGCCGCATCCAATGAAATGGTTTGTGGGATATGTGGCAGCGGTCATGACCAAGATAGAATGGCAAAATGTATTCGGTGCAATGTCTATCAACATTGTTATTGCTTCCCAGTGGTGACATATGATGTTCCTGATGAATGGTGTTGTTGTGAGTGCCAAAACAAGTCCAATTGGGACCAAACTCCTAGTCAAGGTGGGCAAACTATCAGGAATAGAGTCCATCAAGATAGCCTGAAAATTCCAAACAAGTTTGAAAATGCCAAAGTGAAATACATTTCTTATGAAGAGGTGTCATTATTGAATAATAATGAGAGACCACCAAATTGTAGGTCAAATTTTCATGTGCGACGTACAAATAGTCATGTCCGTCCTGCATCTCCTCCAAATGCGAAACAGTCATCTAGTAGGAGTGACAATCGTGCTTATAGCCAGTTCCATCGGAAATTTCCAAATGGGCAGCAGTCCCCCTGTAGGAGTGACACTCAAGGGCCTTTTCTGAAACGAGGTGATGGTGCAAGTCAGAACCAGACAGAGATTGCTGGTATAAACATGAAACAGAAAGCACAATCAGGTGAGATGCTTCGTCCATGTCATAGAAGCAGAGCAATTAGAGGAAAAATTGACTTTCAGGTTCAAAATGAGCAGAGGGAAAAGAAGGTAGTTAGTGCAGATAAAGTAACAATGAACCCCCAGAGTCGGGATGATCCTAGAGAAAAGAGTGGATCCAATGTTACAGGTACTGATATTGGACGTGGATCTGAAATGAGTCCGGACAATGATATAGGCATGCTGGTGGTCATTAATTCAAGTGTGGAATATGCAAGACAACCTCCACCAGAAATTTGTT-GGACGGGATGCTTTCTTGTCTCCAATGGATCAAACTGTAATCCTGCTGATTTTAAAGCTTACTGCCCATCAAAAGTGTCGTCTAAAGTTCTCAATGTCATCAAGAGCATGCCTAGTATAATAGAGTTGGATATATTGCCTCGAATGGATGAATGGCCAAAATCTTTTGAGATAAATCCACCAGTTTATGAAGACATTGGCCTGTTCTTCTTCTCCACTGAACTTGACCGGAATGGAAAGAGTCAATCTCATGTCATGGAGACGAGCTGCAATTTTGTTATGAGGGC]

[+] EMBL AK073684             [CGAGTAGGGCTTCCTCCTTCTTGCTGCTTTCGGCTGCTGCTTCCGCGCCATCCATCCTAGTGACCACATCCTCCGCCACCGCCGATCCCCATCCATCGCGCGAGCATGGTCGCCGTCGCTCGTCCTGCTGCTTCCGCCGCATCCAATGAAATGGTTTGTGGGATATGTGGCAGCGGTCATGACCAAGATAGAATGGCAAAATGTATTCGGTGCAATGTCTATCAACATTGTTATTGCTTCCCAGTGGTGACATATGATGTTCCTGATGAATGGTGTTGTTGTGAGTGCCAAAACAAGTCCAATTGGGACCAAACTCCTAGTCAAGGTGGGCAAACTATCAGGAATAGAGTCCATCAAGATAGCCTGAAAATTCCAAACAAGTTTGAAAATGCCAAAGTGAAATACATTTCTTATGAAGAGGTGTCATTATTGAATAATAATGAGAGACCACCAAATTGTAGGTCAAATTTTCATGTGCGACGTACAAATAGTCATGTCCGTCCTGCATCTCCTCCAAATGCGAAACAGTCATCTAGTAGGAGTGACAATCGTGCTTATAGCCAGTTCCATCGGAAATTTCCAAATGGGCAGCAGTCCCCCTGTAGGAGTGACACTCAAGGGCCTTTTCTGAAACGAGGTGATGGTGCAAGTCAGAACCAGACAGAGATTGCTGGTATAAACATGAAACAGAAAGCACAATCAGGTGAGATGCTTCGTCCATGTCATAGAAGCAGAGCAATTAGAGGAAAAATTGACTTTCAGGTTCAAAATGAGCAGAGGGAAAAGAAGGTAGTTAGTGCAGATAAAGTAACAATGAACCCCCAGAGTCGGGATGATCCTAGAGAAAAGAGTGGATCCAATGTTACAGGTACTGATATTGGACGTGGATCTGAAATGAGTCCGGACAATGATATAGGCATGCTGGTGGTCATTAATTCAAGTGTGGAATATGCAAGACAACCTCCACCAGAAATTTGTT GGACGGGATGCTTTCTTGTCTCCAATGGATCAAACTGTAATCCTGCTGATTTTAAAGCTTACTGCCCATCAAAAGTGTCGTCTAAAGTTCTCAATGTCATCAAGAGCATGCCTAGTATAATAGAGTTGGATATATTGCCTCGAATGGATGAATGGCCAAAATCTTTTGAGATAAATCCACCAGTTTATGAAGACATTGGCCTGTTCTTCTTCTCCACTGAACTTGACCGGAATGGAAAGAGTCAATCTCATGTCATGGAGACGAGCTGCAATTTTGTTATGAGGGC]
[+] EMBL AA753017             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            gcacgagaTAATTCAAGTGTGGAATATGCAAGACAACCTCCACCAGAAATTTGTTGGGACGGGATGCTTTCTTGTCTCCAATGGATCAAACTGTAATCCTGCTGATTTTAAAGCTTACTGCCCATCAAAAGTGTCGNCTAAAGTTCTCAATGTCATCAAGANCATGCCTAGTATAATAGAGTTGGATATATTGCCTCGAATGGATGAATGGCCAAAATCTTTTGAGATAAATCCACCAGTTTATGAAGACATTGGCCTGTTCTTCTTCTCCACTGAACTTGACCGGAATGGAAAGAATCAATCTCNTGTCATGGAGACGANCTGCAATTTTGTTNTGAGGGC]


>consensus_1535#0 CGAGTAGGGCTTCCTCCTTCTTGCTGCTTTCGGCTGCTGCTTCCGCGCCATCCATCCTAG TGACCACATCCTCCGCCACCGCCGATCCCCATCCATCGCGCGAGCATGGTCGCCGTCGCT CGTCCTGCTGCTTCCGCCGCATCCAATGAAATGGTTTGTGGGATATGTGGCAGCGGTCAT GACCAAGATAGAATGGCAAAATGTATTCGGTGCAATGTCTATCAACATTGTTATTGCTTC CCAGTGGTGACATATGATGTTCCTGATGAATGGTGTTGTTGTGAGTGCCAAAACAAGTCC AATTGGGACCAAACTCCTAGTCAAGGTGGGCAAACTATCAGGAATAGAGTCCATCAAGAT AGCCTGAAAATTCCAAACAAGTTTGAAAATGCCAAAGTGAAATACATTTCTTATGAAGAG GTGTCATTATTGAATAATAATGAGAGACCACCAAATTGTAGGTCAAATTTTCATGTGCGA CGTACAAATAGTCATGTCCGTCCTGCATCTCCTCCAAATGCGAAACAGTCATCTAGTAGG AGTGACAATCGTGCTTATAGCCAGTTCCATCGGAAATTTCCAAATGGGCAGCAGTCCCCC TGTAGGAGTGACACTCAAGGGCCTTTTCTGAAACGAGGTGATGGTGCAAGTCAGAACCAG ACAGAGATTGCTGGTATAAACATGAAACAGAAAGCACAATCAGGTGAGATGCTTCGTCCA TGTCATAGAAGCAGAGCAATTAGAGGAAAAATTGACTTTCAGGTTCAAAATGAGCAGAGG GAAAAGAAGGTAGTTAGTGCAGATAAAGTAACAATGAACCCCCAGAGTCGGGATGATCCT AGAGAAAAGAGTGGATCCAATGTTACAGGTACTGATATTGGACGTGGATCTGAAATGAGT CCGGACAATGATATAGGCATGCTGGTGGTCATTAATTCAAGTGTGGAATATGCAAGACAA CCTCCACCAGAAATTTGTTGGACGGGATGCTTTCTTGTCTCCAATGGATCAAACTGTAAT CCTGCTGATTTTAAAGCTTACTGCCCATCAAAAGTGTCGTCTAAAGTTCTCAATGTCATC AAGAGCATGCCTAGTATAATAGAGTTGGATATATTGCCTCGAATGGATGAATGGCCAAAA TCTTTTGAGATAAATCCACCAGTTTATGAAGACATTGGCCTGTTCTTCTTCTCCACTGAA CTTGACCGGAATGGAAAGAGTCAATCTCATGTCATGGAGACGAGCTGCAATTTTGTTATG AGGGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)