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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15444#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1491 fasta sequence
[TCCCAAACCCCTCTCGCACCCAATCCAACCCAATCCCCTCCTCATCCACTCCGCTCTGCGGCCATGGCCGCCTGCTGCTCCTCCCTCGCCACCGCCGTCTCCTCCTCCTCCGCCAAGCCCCTCGCCGGCATCCCCCCCGCCGCGCCGCACTCCCTCTCCCTCCCCCGCGCTCCCGCCGCCAGGCCCCTCCGCCTCTCCGCCTCCTCATCCAGATCCGCCCGGGCCAGCAGCTTCGTCGCCCGCGCCGGCGGTGTGGACGATGCGCCGCTGGTCGGGAACAAGGCGCCCGACTTCGATGCGGAGGCAGTCTTCGACCAGGAGTTCATCAACGTGAAGCTGTCCGACTACAT-CGGGAAGAAGTACGT-CATTCTCTTCTTCTACCCGTTGGACTTCACC-TTCGTCTG-CCCGACC-GAGATTACCGCTTTCAGTG-ACAGATACGATGAGTTCGAGAAGTTGAACACTG-AGATCCTCGGTGTTTCAATTGACAGTGTGTTCTCCCATCTTGCATGGGTGCAGACAGACAGGAAATCTGGTGGGCTTGGTGATCTGAAATACCCATTGATTTCAGATGTTACTAAAT-CAATTTCGAAGTCCTTTGGTGTCTTGATCCCTGACCAGGGAATTGCT-CTGAGAGGACTTTTCATCATTGACAAGGAGGGAGTGATTCAGCACTCTACCATTAACAACCTTGCCATTGGACGCAGTGTAGATGAGACCATGAGGACCCTTCAGGCGTTGCAGTACGTCCAGGACAACCCGGACGAGGTGTGCCCGGCCGGATGGAAGCCCGGTGACAAGTCGATGAAGCCTGACCCCAAGGGAAGCAAGGAGTACTTCGCGGCCATCTAAGCACACATATGCATATGCCTGGTGATGGATGTAGGGAGTTTTTTTGCTTTCGCGAGAGCCATTGCGTTTCGTCTCCAAAGTGTAGTACCGTGTGCTCGTCTGATCGGA-TTTTGTTACTTGTTCGCCACCAGCTGTTACTTTGTTCCCTAACAAATAAGGCTTTGTTTTGGTCGTGTTATACATGTATACATGTT-AGTGCGTTTCAAGATCGCTTCTGTTTTGGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTTTTCCCTTTCCTTACCTTTTTTTTAACACAAGGGCCAATTTCCGGCCCTTTAATTTAATTTCCCCTTATAGGAATTCTTTTAAAAATCCCTTGCCCGTCTTTTAAAAACTTGGTAATTGAAAAACCCTTGGTTTTCCCAATTTAATTCCCTTTAAAAAAAATCCCCTTTTCCCCATTTGGCTTATTACCAAAAAGCCCCCCCCCAATCCCCTTTCCAAAAATTTGCCAACCTTATACTTCCGGAATTTAAGGTTTTACCCTTAAAAAAAAAAAACCCTTTTTCCCTTTTTTGGGGTTTCCCAAATTATTTTTTTTACCC]
[+] EMBL AK068919 [TCCCAAACCCCTCTCGCACCCAATCCAACCCAATCCCCTCCTCATCCACTCCGCTCTGCGGCCATGGCCGCCTGCTGCTCCTCCCTCGCCACCGCCGTCTCCTCCTCCTCCGCCAAGCCCCTCGCCGGCATCCCCCCCGCCGCGCCGCACTCCCTCTCCCTCCCCCGCGCTCCCGCCGCCAGGCCCCTCCGCCTCTCCGCCTCCTCATCCAGATCCGCCCGGGCCAGCAGCTTCGTCGCCCGCGCCGGCGGTGTGGACGATGCGCCGCTGGTCGGGAACAAGGCGCCCGACTTCGATGCGGAGGCAGTCTTCGACCAGGAGTTCATCAACGTGAAGCTGTCCGACTACAT CGGGAAGAAGTACGT CATTCTCTTCTTCTACCCGTTGGACTTCACC TTCGTCTG CCCGACC GAGATTACCGCTTTCAGTG ACAGATACGATGAGTTCGAGAAGTTGAACACTG AGATCCTCGGTGTTTCAATTGACAGTGTGTTCTCCCATCTTGCATGGGTGCAGACAGACAGGAAATCTGGTGGGCTTGGTGATCTGAAATACCCATTGATTTCAGATGTTACTAAAT CAATTTCGAAGTCCTTTGGTGTCTTGATCCCTGACCAGGGAATTGCT CTGAGAGGACTTTTCATCATTGACAAGGAGGGAGTGATTCAGCACTCTACCATTAACAACCTTGCCATTGGACGCAGTGTAGATGAGACCATGAGGACCCTTCAGGCGTTGCAGTACGTCCAGGACAACCCGGACGAGGTGTGCCCGGCCGGATGGAAGCCCGGTGACAAGTCGATGAAGCCTGACCCCAAGGGAAGCAAGGAGTACTTCGCGGCCATCTAAGCACACATATGCATATGCCTGGTGATGGATGTAGGGAGTTTTTTTGCTTTCGCGAGAGCCATTGCGTTTCGTCTCCAAAGTGTAGTACCGTGTGCTCGTCTGATCGGA TTTTGTTACTTGTTCGCCACCAGCTGTTACTTTGTTCCCTAACAAATAAGGCTTTGTTTTGGTCGTGTTATACATGTATACATGTT AGTGCGTTTCAAGATCG ]
[+] EMBL AK104703 [ CCCAAACCCCTCTCGCACCCAATCCAACCCAATCCCCTCCTCATCCACTCCGCTCTGCGGCCATGGCCGCCTGCTGCTCCTCCCTCGCCACCGCCGTCTCCTCCTCCTCCGCCAAGCCCCTCGCCGGCATCCCCCCCGCCGCGCCGCACTCCCTCTCCCTCCCCCGCGCTCCCGCCGCCAGGCCCCTCCGCCTCTCCGCCTCCTCATCCAGATCCGCCCGGGCCAGCAGCTTCGTCGCCCGCGCCGGCGGTGTGGACGATGCGCCGCTGGTCGGGAACAAGGCGCCCGACTTCGATGCGGAGGCAGTCTTCGACCAGGAGTTCATCAACGTGAAGCTGTCCGACTACAT CGGGAAGAAGTACGT CATTCTCTTCTTCTACCCGTTGGACTTCACC TTCGTCTG CCCGACC GAGATTACCGCTTTCAGTG ACAGATACGATGAGTTCGAGAAGTTGAACACTG AGATCCTCGGTGTTTCAATTGACAGTGTGTTCTCCCATCTTGCATGGGTGCAGACAGACAGGAAATCTGGTGGGCTTGGTGATCTGAAATACCCATTGATTTCAGATGTTACTAAAT CAATTTCGAAGTCCTTTGGTGTCTTGATCCCTGACCAGGGAATTGCT CTGAGAGGACTTTTCATCATTGACAAGGAGGGAGTGATTCAGCACTCTACCATTAACAACCTTGCCATTGGACGCAGTGTAGATGAGACCATGAGGACCCTTCAGGCGTTGCAGTACGTCCAGGACAACCCGGACGAGGTGTGCCCGGCCGGATGGAAGCCCGGTGACAAGTCGATGAAGCCTGACCCCAAGGGAAGCAAGGAGTACTTCGCGGCCATCTAAGCACACATATGCATATGCCTGGTGATGGATGTAGGGAGTTTTTTTGCTTTCGCGAGAGCCATTGCGTTTCGTCTCCAAAGTGTAGTACCGTGTGCTCGTCTGATCGGA TTTTGTTACTTGTTCGCCACCAGCTGTTACTTTGTTCCCTAACAAATAAGGCTTTGTTTTGGTCGTGTTATACATGTATACATGTT ]
[+] EMBL BP184475 [ TCGCACCCAATCCAACCCAATCCCCTCCTCATCCACTCCGCTCTGCGGCCATGGCCGCCTGCTGCTCCTCCCTCGCCACCGCCGTCTCCTCCTCCTCCGCCAAGCCCCTCGCCGGCATCCCCCCCGCCGCGCCGCACTCCCTCTCCCTCCCCCGCGCTCCCGCCGCCAGGCCCCTCCGCCTCTCCGCCTCCTCATCCAGATCCGCCCGGGCCAGCAGCTTCGTCGCCCGCGCCGGCGGTGTGGACGATGCGCCGCTGGTCGGGAACAAGGCGCCCGACTTCGATGCGGAGGCAGTCTTCGACCAGGAGTTCATCAACGTGAAGCTGTCCGACTACAT CGGGAAGAAGTACGT CATTCTCTTCTTCTACCCGTTGGACTTCACC TTCGTCTG CCCGACC GAGATTACCGCTTTCAGTG ACAGATACGATGAGTTCGAGAAGTTGAACACTG AGATCCTCGGTG TTCAATTGACAGTGTGTTCTCCCATCTTGCATGGGTGCAGACAGACAGGAAATCTGGTGGGCTTGG ]
[+] EMBL CB655092 [ CCCACCCTAACCCAATCCCCTCCTCATCCACTCCGCTCTGCGGCCATGGCCGCCTGCTGCTCCTCCCTCGCCACCGCCGTCTCCTCCTCCTCCGCCAAGCCCCTCGCCGGCATCCCCCCCGCCGCGCCGCACTCCCTCTCCCTCCCCCGCGCTCCCGCCGCCAGGCCCCTCCGCCTCTCCGCCTCCTCATCCAGATCCGCCCGGGCCAGCAGCTTCGTCGCCCGCGCCGGCGGTGTGGACGATGCGCCGCTGGTCGGGAACAAGGCGCCCGACTTCGATGCGGAGGCAGTCTTCGACCAGGAGTTCATCAACGTGAAGCTGTCCGACTACAT CGGGAAGAAGTACGT CATTCTCTTCTTCTACCCGTTGGACTTCACC TTCGTCTG CCCGACC GAGATTACCGCTTTCAGTG ACAGATACGATGAGTTCGAGAAGTTGAACACTG AGATCCTCGGTGTTTCAATTGACAGCGTGTTCTCCCATCTTGCATGGGTGCAGACAGACAGGAAATCTGGTGGGCTTGGTGATCTGAAATACCCATTGATTTCAGATGTTACTAAATCCAATTTCCAAGCCCTTTGGCGCCTTGATCCCTGACCAGGGAATTGCTCCTGAGAGGAC ]
[+] EMBL AU162786 [ CCAATCCAACCCAATCCCCTCCTCATCCACTCCGCTCTGCGNCCATGGCCGGCTGCTGCTCCTCCCTCGCCACCGCCGTCTCCTCCTCCTCCGCCAAGCCCCTCGCCGGCATCCCCCCCGCCGCGCCGCACNCCCTCTCCCTCCCCCGCGCTCCCGCCGCCA GNCCCTCCGCCTCNCCGCCTCCTCATCCAGATCCGCCCGGGCCAGCAGCTTCGTCGCCCGCGCCGGCGGTGTGGACGATGCGCCGCTGGTCGGGAACAAGGCGCCCGACTTCGATGCGGAGGCAGTCTTCGACCAGGAGTTCATCAACGTGAAGCTGTCCGACTACAT CGGGAAGAAGTACGT CATTCTCTTCTTCTACCCGTTGGACTTCACC TTCGTCTG CCCGACCGGAGATTACCGCTTTCAGTGAACAGATACGATGAGTTCGAGAAGTTGAACACTG AGATCCTCGGTGTTTCAATTGACAGTGTGTTCTCCCATCTTGCATGGGTGCAGACAGACAGGAAATCTGGTGGGCTTGGTGATCTGAAATACCCATTGATTTCAGATGTTACTAAAT CAATTTCGAAGTCCTTTGGTGTCTTGATCCCTGACCAGGGAATTGCT CTGAGAGGACTTTTCATCATTGACAAGGAGGGAGTGATTCAGNACTCTACCATTAACAACCTTGCCATTGGACG AG GTAGATGAG ]
[+] EMBL AU182276 [ GCGGCCATGGCCGCCTGCTGCTCCTCCCTCGCCACCGCCGTCTCCTCCTCCTCCGCCAAGCCCCTCGCCGGCATCCCCCCCGCCGCGCCGCACTCCCTCTCCCTCCCCCGCGCTCCCGCCGCCAGGCCCCTCCGCCTCTCCGCCTCCTNATCCAGATCCGCCCGGGCCAGCAGCTTCGTCGCCCGCGCCGGCGGTGTGGACGATGCGCCGCTGGTCGGGAACAAGGCGCCCGACTTCGATGCGGAGGCAGTCTTCGACCAGGAGTTCATCAACGTGAAGCTGTCCGACTACAT CGGGAAGAAGTACGT CATTCTCTTCTTCTACCCGTTGGACTTCACC TTCGTCTG CCCGACC GAGATTACCGCTTTCAGTG ACAGATACGATGAGTTCGAGAAGTTGAACACTG AGATCCTCGGTGTTTCAATTGAC ]
[+] EMBL BP185001 [ acgagGCGCCGCACTCCCTCTCCCTCCCCCGCGCTCCCGCCGCCAGGCCCCTCCGCCTCTCCGCCTCCTCATCCAGATCCGCCCGGGCCAGCAGCTTCGTCGCCCGCGCCGGCGGTGTGGACGATGCGCCGCTGGTCGGGAACAAGGCGCCCGACTTCGATGCGGAGGCAGTCTTCGACCAGGAGTTCATCAACGTGAAGCTGTCCGACTACAT CGGGAAGAAGTACGT CATTCTCTTCTTCTACCCGTTGGACTTCACC TTCGTCTG CCCGACC GAGATTACCGCTTTCAGTG ACAGATACGATGAGTTCGAGAAGTTGAACACTG AGATCCTCGGTGTTTCAATTGACAGTGTGTTCTCCCATCTTGCATGGGTGCAGACAGACAGGAAATCTGGTGGGCTTGGTGATCTGAAATACCCATTGATTTCAGATGTTACTAAAT CAATTTCGAAGTCCTTTGGTGTCTTGATCCCTGACCAGGGAATTGCT CTGAGAGGACTTTTCATCATTGACAAGGAGGGAGTGATTCAGCACTCTACCATTAACAACCTTGCCATTGGACGCAGTGTAGATGAGACCATGAGGACCCTTCAGGCGTTGCAGTACGTCCAGGACAACCCGGACGAGGTGTGCCCGGCCGGATGGAAGCCCGGTGACAAGTCGATGAAG ]
[+] EMBL BP184961 [ ACGAGGCGCCGCTGGTCGGGAACAAGGCGCCCGACTTCGATGCGGAGGCAGTCTTCGACCAGGAGTTCATCAACGTGAAGCTGTCCGACTACAT CGGGAAGAAGTACGT CATTCTCTTCTTCTACCCGTTGGACTTCACC TTCGTCTG CCCGACC GAGATTACCGCTTTCAGTG ACAGATACGATGAGTTCGAGAAGTTGAACACTG AGATCCTCGGTGTTTCAATTGACAGTGTGTTCTCCCATCTTGCATGGGTGCAGACAGACAGGAAATCTGGTGGGCTTGGTGATCTGAAATACCCATTGATTTCAGATGTTACTAAAT CAATTTCGAAGTCCTTTGGTGTCTTGATCCCTGACCAGGGAATTGCT CTGAGAGGACTTTTCATCATTGACAAGGAGGGAGTGATTCAGCACTCTACCATTAACAACCTTGCCATTGGACGCAGTGTAGATGAGACCATGAGGACCCTTCAGGCGTTGCAGTACGTCCAGGACAACCCGGACGAGGTGTGCCCGGCCGGATGGAAGCCCGGTGACAAGTCGATGAAGCCTGACCCCAAGGGAAGCAAGGAGTACTTCGCGGCCATCTAAGCACACATATGCATATGCCTGGTGATGGATGTAGG ]
[-] EMBL CB682775 [ TCATCAACGTGAAGCTGTCCGACTACAT CGGGAAGAAGTACGT CATTCTCTTCTTCTACCCGTTGGACTTCACC TTCGTCTG CCCGACC GAGATTACCGCTTTCAGTG ACAGATACGATGAGTTCGAGAAGTTGAACACTG AGATCCTCGGTGTTTCAATTGACAGTGTGTTCTCCCATCTTGCATGGGTGCAGACAGACAGGAAATCTGGTGGGCTTGGTGATCTGAAATACCCATTGATTTCAGATGTTACTAAAT CAATTTCGAAGTCCTTTGGTGTCTTGATCCCTGACCAGGGAATTGCT CTGAGAGGACTTTTCATCATTGACAAGGAGGGAGTGATTCAGCACTCTACCATTAACAACCTTGCCATTGGACGCAGTGTAGATGAGACCATGAGGACCCTTCAGGCGTTGCAGTACGTCCAGGACAACCCGGACGAGGTGTGCCCGGCCGGATGGAAGCCCGGTGACAAGTCGATGAAGCCTGACCCCAAGGGAAGCAAGGAGTACTTCGCGGCCATCTAAGCACACATATGCATATGCCTGGTGATGGATGTAGGGAGTTTTTTTGCTTTCGCGAGAGCCATTGCGTTTCGTCTCCAAAGTGTAGTACCGTGTGCTCGTCTGATCGGA TTTTGTTACTTGTTCGCCACCAGCTGTTACTTTGTTCCCTAACAAATAAGGCTTTGTTTTGGTCGTGTTAAGCATGTATACATGTT AGTGCGTTTCAA ]
[+] EMBL AU160910 [ ACATCCGGGAAGAAGTACGTCCATTCTCTTCTTCTACCCGTTGGACTTCACCTTTCGTCTGCCCCGACC GAGATTACCGCTTTCAGTG ACAGATACGATGNGTTCGAGAAGTTGAACACTGAAGATCCTCGGTGTTTCAATTGACAGTGTGTTCTCCCATCTTGCATGGGTGCAGACAGACAGGAAATCTGGTGGGCTTGGTGATCTGAAATACCCATTGATTTCAGATGTTACTAAAT CAATTTCGAAGTCCTTTGGTGTCTTGATCCCTGACCAGGGAATTGCT CTGAGAGGACTTTTCATCATTGACAAGGAGGGAGTGATTCAGCACTCTACCATTAACAACCTTGCCATTGGACGCAGTGTAGATGAGNCCATGAGGACCCTTCAGGCGTTGCAGTACGTCCAGGACAACCCGGACGAGGTGTGCCCGGCCGGATGGAAGCCCGGTGACAAGTCGATGAAGCCTGACCCCAAGGGAAGCAAGGAGTA TTCGCGGCCATCTAAGCACACATATGCATATGCCTGGTGATGGATGTAGGGAGTTTTTTTGCTTTCGCGAGAGCCATTGCGTTTCGTCTCCAAAGTGTAGTACCGTGTGCTCGTCTGATCGGA TTTTGTTACTTGTTCGCCACCAGCTGTTACTTTGTTCCCTAACAAATAAGGCTTTGTTTTGGTCGTGTTAaaaaaa ]
[-] EMBL CB655093 [ AAGAAGTACGT CATTCTCTTCTTCTACCCGTTGGACTTCACC TTCGTCTG CCCGACC GAGATTACCGCTTTCAGTG ACAGATACGATGAGTTCGAGAAGTTGAACACTG AGATCCTCGGTGTTTCAATTGACAGTGTGTTCTCCCATCTTGCATGGGTGCAGACAGACAGGAAATCTGGTGGGCTTGGTGATCTGAAATACCCATTGATTTCAGATGTTACTAAAT CAATTTCGAAGTCCTTTGGTGTCTTGATCCCTGACCAGGGAATTGCT CTGAGAGGACTTTTCATCATTGACAAGGAGGGAGTGATTCAGCACTCTACCATTAACAACCTTGCCATTGGACGCAGTGTAGATGAGACCATGAGGCCCCTTCAGGCGTTGCAGTACGTCTAGGACAACCCGGCCGAGGTGTGCCCGGCCGGATGGAAGCCCGGTGACAAGTCGATGAAGCCTGACCCCACGGGAAGCAAGGAGTACTTCGCGGCCATCTAAGCACACATATGCATATGCCTGGTGATGGATGTAGGGAGTTTTTTTGCTTTCGCGAGAGCCATTGCGTTTCGTCTCCAAAGTGTAGTACCGTGTGCTCGTCTGATCGGA TTTTGTTACTTGTTCGCCACCAGCTGTTACTTTGTTCCTAAAGGAATAAGGCTTTGT ]
[+] EMBL BI796730 [ GTCCAGACA ACAGGAAATCTGGTGGGCTTGGTGATCTGAAATACCCATTGATTTCAGATGTTACTAAAT CAATTTCGAAGTCCTTTGGTGTCTTGATCCCTGACCAGGGAATTGCT CTGAGAGGACTTTTCATCATTGACAAGGAGGGAGTGATTCAGCACTCTACCATTAACAACCTTGCCATTGGACGCAGTGTAGATGAGACCATGAGGACCCTTCAGGCGTTGCAGTACGTCCAGGACAACCCGGACGAGGTGTGCCCGGCCGGATGGAAGCCCGGTGACAAGTCGATGAAGCCTGACCCCAAGGGAAGCAAGGAGTACTTCGCGGCCATCTAAGCACACATATGCATATGCCTGGTGATGGATGTAGGGAG TTTTTTGCTTTCGCGAGAGCCATTGCGTTTCGTCTCC AAGTGTAGTACCGTGTGCTCGTCTGATCGGATTTTTGTTACTTGTTCGCCACCAGCTGTTACTTTGTTCCCTAAC AATAAGGCTTTGTTTTGGTCGTGTTATAaaaaaaaa ]
[+] EMBL AU065872 [ GATTCAGCACTCTACCATTAACAACCTTGCCATTGGACGCAGTGTAGATGAGACCATGAGGACCCTTCAGGCGTTGCAGTACGTCCAGGACAACCCGGACGAGGTGTGCCCGGCCGGATGGAAGCCCGGTGACAAGTCGATGAAGCCTGACCCCAAGGGAAGCAAGGAGTACTTCGCGGCCATCTAAGCACACATATGCATATGCCTGGTGATGGATGTAGGGAGTTTTTTTGCTTTCGCGAGAGCCATTGCGTTTCGTCTCCAAAGTGTAGTACCGTGTGCTCGTCTGATCGGA TTTTGTTACTTGTTCGCCACCAGCTGTTACTTTGTTCCCTAACAAATAAGGCTTTGTTTTGGTCGTGTTATACATGTATACATGTTAAGTGCGTTTCAAGATCGCTTCTGTTTTGGGTAAAAAA ]
[+] EMBL OSS14328A [ GATTCAGCACTCTACCATTAACAACCTTGCCATTGGACGCAGTGTAGATGAGACCATGAGGACCCTTCAGGCGTTGCAGTACGTCCAGGACAACCCGGACGAGGTGTGCCCGGCCGGATGGAAGCCCGGTGACAAGTCGATGAAGCCTGACCCCAAGGGAAGCAAGGAGTACTTCGCGGCCATCTAAGCACACATATGCATATGCCTGGTGATGGATGTAGGGAGTTTTTTTGCTTTCGCGAGAACCATTGCGTTTCGTCTCCAAAGTGTAGTACCGTGTGCTCGTCTGATCGGA TTTTGTTACTTGTTCGCCACCAGCTG ]
[+] EMBL AU096571 [ ATTCAGCACTCTACCATTAACAACCTTGCCATTGGACGCAGTGTAGATGAGACCATGAGGACCCTTCAGGCGTTGCAGTACGTCCAGGACAACCCGGACGAGGTGTGCCCGGCCGGATGGAAGCCCGGTGACAAGTCGATGAAGCCTGACCCCAAGGGAAGCAAGGAGTA TTCGCGGCCATCTAAGCACACATATGCATATGCCTGGTGATGGATGTAGGGAGTTTTTTTGCTTTCGCGAGAGCCATTGCGTTTCGTCTCCAAAGTGTAGTACCGTGTGCTCGTCTGATCGGA TTTTGTTACTTGTTCGCCACCAGCTGTTACTTTGTTCCCTNACAAATAAGGCTTTGTTTTGGTCGTGTTATACATGTATACATGTT AGTGCGTTTCAAGATCGCTTCTGTTTTGGGTTAAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL AU057894 [ cnGACCCCAAGGGAAGCAAGGAGTACTTCGCGGCCATCTAAGCACACATATGNATATGCCTGGTGATGGATGTAGGGAGTTTTTTTGCTTTCGCGAGAGCCATTGCGTTTCGTCNCCAAAGTGTAGTACCGTGTGCTCGTCTGATCGGA TTTTGTTANTTGTTCGCCACCAGCTGTTACTTTGTTCCCTAACAAATAAGGCTTTGTTTTGGTCGTGTTATACATGTATNNATGTT AGTGCGTTTCAAGATCGCTTCTGTTTTGGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL CF319008 [ AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTTTTCCCTTTCCTTACCTTTTTTTTAACACAAGGGCCAATTTCCGGCCCTTTAATTTAATTTCCCCTTATAGGAATTCTTTTAAAAATCCCTTGCCCGTCTTTTAAAAACTTGGTAATTGAAAAACCCTTGGTTTTCCCAATTTAATTCCCTTTAAAAAAAATCCCCTTTTCCCCATTTGGCTTATTACCAAAAAGCCCCCCCCCAATCCCCTTTCCAAAAATTTGCCAACCTTATACTTCCGGAATTTAAGGTTTTACCCTTAAAAAAAAAAAACCCTTTTTCCCTTTTTTGGGGTTTCCCAAATTATTTTTTTTACCC]
consensusID : consensus_15444#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 592 fasta sequence
[AATTGACCAGTGTGTTCTCCCATCTTGCATGGGTNCAGACAGACAGGAAATCTGGTGGGCTTGGTGATCTGAAATACCCATTGATTTCAGATGTTACTAAATCAATTTCGAAGTCCTTTGGTGTCTTGA-NCCCTGACCAGGGAATTGCTCTGAGAGGACTTTT-CATCATTGACAAGGAGGGAGTGATTCAGCACTCTACCATTAACANCCTTGCCATTGGACGCAGTNTAGATGAGACCATGAGGACCCTTCAGGCGTTGCAGTACGTCCAGGACAACCCGGACGAGGTNTGCCCGGCCGGATGGAAGCCCGGTGACAAGTCGATGAAGCCTGACCCCAAGGGAAGCAAGGAGTACTTCGCGGCCATCTAAGCACACATATGCATATGCCTGGTGATGGATGTAGGGAGTTTTTTTGCTTTCGCGAGAGCCATTGCGTTTCGTCTCCAAAGTGTAGTACCGTGTGCTCGTCTGATCGGATTTTGTTACTTGTTCGCCNCCAGCTGTTACTTTGTTCCCTAACAAATAAGGCTTTGTTTTGGTCGTGTTATACATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU096250 [AATTGACCAGTGTGTTCTCCCATCTTGCATGGGTNCAGACAGACAGGAAATCTGGTGGGCTTGGTGATCTGAAATACCCATTGATTTCAGATGTTACTAAATCAATTTCGAAGTCCTTTGGTGTCTTGA NCCCTGACCAGGGAATTGCTCTGAGAGGACTTTT CATCATTGACAAGGAGGGAGTGATTCAGCACTCTACCATTAACANCCTTGCCATTGGACGCAGTNTAGATGAGACCATGAGGACCCTTCAGGCGTTGCAGTACGTCCAGGACAACCCGGACGAGGTNTGCCCGGCCGGATGGAAGCCCGGTGACAAGTCGATGAAGCCTGACCCCAAGGGAAGCAAGGAGTACTTCGCGGCCATCTAAGCACACATATGCATATGCCTGGTGATGGATGTAGGGAGTTTTTTTGCTTTCGCGAGAGCCATTGCGTTTCGTCTCCAAAGTGTAGTACCGTGTGCTCGTCTGATCGGATTTTGTTACTTGTTCGCCNCCAGCTGTTACTTTGTTCCCTAACAAATAAGGCTTTGTTTTGGTCGTGTTATACATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU029370 [ GAAATACCCATTGATTTCAGATGTTACTAAATCAATTTCGAAGTCCTTTGGTGTCTTGATCCCCTGACCAGGGAATTGCTCTGANAGGACTTTTCCATCATTGACAAGGAGGGANTGATTCAGCACTCTACCATTAACAACCTTGCCATTGGACGCAGTGTAGATGAGACCATGAGGACCCTTNAGGCGTTGCAGTACGTCCAGGACAACCCGGACGAGGTGTGCCCGGCCGGATGGAAGCCCGGTGACAAGTCGATGAAGCCTGACCCCAAGGGAAGCAAGGAGTACTTCGCGGCCATCTAAGCACACATATGCATATGCCTGGTGATGGATGTAGGGAGTTTTTTTGCTTTCGCGAGAGCCATTGCGTTTCGTCTCCAAAGTGTAGTACCGTGTGCTCGTCTGATCGGATTTTGTTACTTGTTCGCCACCAGCTGTTACTTTGTTCCCTAACAAATAAGGCTTTGTTTTGGTCGTGTTATAAA NAAAAAAAAAA ]
consensusID : consensus_15444#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 456 fasta sequence
[ATGTCACGCACCTTCTATCCACTTAACCACACGCCTTGTCCACTTGTGANACGTCACGTGCTACGATGACGACCCACTGACGGACCCTTCACGGCCGCTTGCCACGTACGCTCCACGGACACATCCCGGACCGAGGCTGTTGCCCGGTCCGGATGGAATGCCCGGTGATCACAGTCGATGAAGCCTGATCTCCCACAGGGAAGCCACATGGAGTACTTCGCGGCCATTCTAAGCACCACCACTATTGCATATGCCTGGTGATGGATGTATGGGAGTTCTNTTTGCTTTCGCCGAGAGCCACTTGCGTTTCGTCTCCACAAGTGTAGTACCGTGTGCTCGTCTGATCGGATTTTTGTTACTTGTTCGCCACCAGCTGTTACTTTGTTCCCTAACAAATAAGGCTTTGTTTTGGTCGTGTTATACATGTATACATGTTAGTGCGTTTCAAAAAAAAAA]
[+] EMBL BQ908828 [ATGTCACGCACCTTCTATCCACTTAACCACACGCCTTGTCCACTTGTGANACGTCACGTGCTACGATGACGACCCACTGACGGACCCTTCACGGCCGCTTGCCACGTACGCTCCACGGACACATCCCGGACCGAGGCTGTTGCCCGGTCCGGATGGAATGCCCGGTGATCACAGTCGATGAAGCCTGATCTCCCACAGGGAAGCCACATGGAGTACTTCGCGGCCATTCTAAGCACCACCACTATTGCATATGCCTGGTGATGGATGTATGGGAGTTCTNTTTGCTTTCGCCGAGAGCCACTTGCGTTTCGTCTCCACAAGTGTAGTACCGTGTGCTCGTCTGATCGGATTTTTGTTACTTGTTCGCCACCAGCTGTTACTTTGTTCCCTAACAAATAAGGCTTTGTTTTGGTCGTGTTATACATGTATACATGTTAGTGCGTTTCAAAAAAAAAA]
consensusID : consensus_15444#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 381 fasta sequence
[CAGGATTCGGCACGAGCGCACCAATCCAACCCAATCCCCTCCTCATCCACTCCGCTCTGCGGCCATGGCCGCCTGCTGCTCCTCCCTCGCCACCGCCGTCTCCTCCTCCTCCGCCAAGCCCCTCGCCGGCATCCCGCCTGCCTCGCCGCACTCCCTCTCCCTCCCTCGCTCCCCCGCCGCCGCCGCCAGGCCCCTCCGCCTCTCCGCCTCCTCCTCCAGATTCGCCCGGGCCAGCAGCTTCGTCGCCCGCGCCGGGGGTGTGGACGATGCGCCGCTGGTCGGGAACAANGCGCCCGACTTCGATGCGGANGCAGTCTTCGACCAAGAATTCATCAACGTGAANCTGTCCGACTACATCGGGAAGAAGTACGTCATTCTCTT]
[+] EMBL AA753022 [CAGGATTCGGCACGAGCGCACCAATCCAACCCAATCCCCTCCTCATCCACTCCGCTCTGCGGCCATGGCCGCCTGCTGCTCCTCCCTCGCCACCGCCGTCTCCTCCTCCTCCGCCAAGCCCCTCGCCGGCATCCCGCCTGCCTCGCCGCACTCCCTCTCCCTCCCTCGCTCCCCCGCCGCCGCCGCCAGGCCCCTCCGCCTCTCCGCCTCCTCCTCCAGATTCGCCCGGGCCAGCAGCTTCGTCGCCCGCGCCGGGGGTGTGGACGATGCGCCGCTGGTCGGGAACAANGCGCCCGACTTCGATGCGGANGCAGTCTTCGACCAAGAATTCATCAACGTGAANCTGTCCGACTACATCGGGAAGAAGTACGTCATTCTCTT]
[+] EMBL BE040474 [ GCTCCTCCCTCGCCACCGCCGTCTCCTCCTCCTCCGCCAAGCCCCTCGCCGGCATCCCGCCTGCCTCGCCGCACTCCCTCTCCCTCCCTCGCTCCCCCGCCGCCGCCGCCAGGCCCCTCCGCCTCTCCGCCTCCTCCTCCAGATCCGCCCGGGCCAGCAGCTTCGTCGCCCGCGCCGGCGGTGTGGACGATGCGCCGCTGGTCGGGAACAAGGCGCCCGACTTCGATGCGGAGGCA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15444#0 ------------------------------------------------------------
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 AATTGACCAGTGTGTTCTCCCATCTTGCATGGGTNCAGACAGACAGGAAATCTGGTGGGC 60
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 ------------------------------------------------------------
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 TTGGTGATCTGAAATACCCATTGATTTCAGATGTTACTAAATCAATTTCGAAGTCCTTTG 120
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 -------------------------------TCCCAAACCCCTCTCGCAC---CCAATCC 26
consensus_15444#3 ---------------------------------CAGGATTCGGCACGAGCGCACCAATCC 27
consensus_15444#1 GTGTCTTGANCCCTGACCAGGGAATTGCTCTGAGAGGACTTTTCATCATTGACAAGGAGG 180
consensus_15444#2 ---------------------------ATGTCACGCACCTTCTATCCACTTAACCACACG 33
consensus_15444#0 AACCCAATCCCCTCCTCATCCACTCCGCTCT-GCGGC--CATGGCCGCCTGCTGCTCCTC 83
consensus_15444#3 AACCCAATCCCCTCCTCATCCACTCCGCTCT-GCGGC--CATGGCCGCCTGCTGCTCCTC 84
consensus_15444#1 GAGTGATTCAGCACTCTACCATTAACANCCTTGCCATTGGACGCAGTNTAGATGAGACCA 240
consensus_15444#2 CCTTG--TCCACTTGTGANACGTCACGTGCT-ACGAT--GACGACCCACTGACGGACCCT 88
** * * * ** * * * * * *
consensus_15444#0 CCTCG--CCACCGCCGTCTCCTCCTCCTCCGCCAAGCCCCTCGCCGGCATC-CCCCCCGC 140
consensus_15444#3 CCTCG--CCACCGCCGTCTCCTCCTCCTCCGCCAAGCCCCTCGCCGGCATC-CCGCCTGC 141
consensus_15444#1 TGAGGACCCTTCAGGCGTTGCAGTACGTCCAGGACAACCCGGAC-GAGGTN--TGCCCGG 297
consensus_15444#2 TCACGGCCGCTTGCCACGTACGCTCCA-CGGACACATCCCGGACCGAGGCTGTTGCCCGG 147
* * * * * * * *** * * ** *
consensus_15444#0 -CGCGCCGCACTCCCTCTCCCTCCC--CCGCGC---TCCCGCCGCC-------AGGCCCC 187
consensus_15444#3 -CTCGCCGCACTCCCTCTCCCTCCC--TCGCTC---CCCCGCCGCCG-CCGCCAGGCCCC 194
consensus_15444#1 -CCGGATGGAA-GCCCGGTGACAA--GTCGATGAAGCCTGACCCCA---AGGGAAGCAA- 349
consensus_15444#2 TCCGGATGGAATGCCCGGTGATCACAGTCGATGAAGCCTGATCTCCCACAGGGAAGCCAC 207
* * * * ** ** * * * * **
consensus_15444#0 TCCGCCTCTCCGCCTCCTCATCCAGATCCGCCCGGGCCAGCAGCTTCGTCGCCCGCGCCG 247
consensus_15444#3 TCCGCCTCTCCGCCTCCTCCTCCAGATTCGCCCGGGCCAGCAGCTTCGTCGCCCGCGCCG 254
consensus_15444#1 --GGAGTACTTCGCGGCCAT-CTAAGCAC----ACATATGCATATGCCTGGTGATGGATG 402
consensus_15444#2 ATGGAGTACTTCGCGGCCATTCTAAGCACCACCACTATTGCATATGCCTGGTGATGGATG 267
* * * * * * * *** * * * * * *
consensus_15444#0 GCGGTGTGGACGATGCGCCGCTGGTCGGGAACAAGGCGCCCGACTTCGATGCGGAGGCAG 307
consensus_15444#3 GGGGTGTGGACGATGCGCCGCTGGTCGGGAACAANGCGCCCGACTTCGATGCGGANGCAG 314
consensus_15444#1 TA-GGGAGTT-TTTTTGCT-TTCGC-GAGAGCCA-TTGCGTTTCGTCTCCA-AAGTGTAG 456
consensus_15444#2 TATGGGAGTTCTNTTTGCT-TTCGCCGAGAGCCACTTGCGTTTCGTCTCCACAAGTGTAG 326
* * * * ** * * * ** * * ** * ** * **
consensus_15444#0 TCTTCGACCAGGAGTTCATCAACGTGAAGCTGTCCGACTA---CATCGGGAAGAAGTACG 364
consensus_15444#3 TCTTCGACCAAGAATTCATCAACGTGAANCTGTCCGACTA---CATCGGGAAGAAGTACG 371
consensus_15444#1 T-----ACCGTGTGCTCGTCTGATCGGATTTT-GTTACTTGTTCGCCNCCAGCTGTTACT 510
consensus_15444#2 T-----ACCGTGTGCTCGTCTGATCGGATTTTTGTTACTTGTTCGCCACCAGCTGTTACT 381
* *** * ** ** * * * *** * * * ***
consensus_15444#0 TCATTCTCTTCTTCTACCCGTTGGACTTCACCTTCGTCTGCCCGACCGAGATTACCGCTT 424
consensus_15444#3 TCATTCTCTT-------------------------------------------------- 381
consensus_15444#1 TTGTTCCCTAACAAATAAGGCTTTGTTTTGGTCGTGTTATACATGTAAAAAAAAAAAAAA 570
consensus_15444#2 TTGTTCCCTAACAAATAAGGCTTTGTTTTGGTCGTGTTATACATGTATACATGTTAGTGC 441
* *** **
consensus_15444#0 TCAGTGACAGATACGATGAGTTCGAGAAGTTGAACACTGAGATCCTCGGTGTTTCAATTG 484
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 AAAAAAAAAAAAAAAAAAAAAA-------------------------------------- 592
consensus_15444#2 GTTTCAAAAAAAAAA--------------------------------------------- 456
consensus_15444#0 ACAGTGTGTTCTCCCATCTTGCATGGGTGCAGACAGACAGGAAATCTGGTGGGCTTGGTG 544
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 ------------------------------------------------------------
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 ATCTGAAATACCCATTGATTTCAGATGTTACTAAATCAATTTCGAAGTCCTTTGGTGTCT 604
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 ------------------------------------------------------------
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 TGATCCCTGACCAGGGAATTGCTCTGAGAGGACTTTTCATCATTGACAAGGAGGGAGTGA 664
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 ------------------------------------------------------------
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 TTCAGCACTCTACCATTAACAACCTTGCCATTGGACGCAGTGTAGATGAGACCATGAGGA 724
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 ------------------------------------------------------------
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 CCCTTCAGGCGTTGCAGTACGTCCAGGACAACCCGGACGAGGTGTGCCCGGCCGGATGGA 784
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 ------------------------------------------------------------
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 AGCCCGGTGACAAGTCGATGAAGCCTGACCCCAAGGGAAGCAAGGAGTACTTCGCGGCCA 844
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 ------------------------------------------------------------
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 TCTAAGCACACATATGCATATGCCTGGTGATGGATGTAGGGAGTTTTTTTGCTTTCGCGA 904
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 ------------------------------------------------------------
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 GAGCCATTGCGTTTCGTCTCCAAAGTGTAGTACCGTGTGCTCGTCTGATCGGATTTTGTT 964
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 ------------------------------------------------------------
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 ACTTGTTCGCCACCAGCTGTTACTTTGTTCCCTAACAAATAAGGCTTTGTTTTGGTCGTG 1024
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 ------------------------------------------------------------
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 TTATACATGTATACATGTTAGTGCGTTTCAAGATCGCTTCTGTTTTGGGTTAAAAAAAAA 1084
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 ------------------------------------------------------------
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1144
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 ------------------------------------------------------------
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 AAAAAAAAAAAAAAAAAAAAACCCTTGTTTTCCCTTTCCTTACCTTTTTTTTAACACAAG 1204
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 ------------------------------------------------------------
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 GGCCAATTTCCGGCCCTTTAATTTAATTTCCCCTTATAGGAATTCTTTTAAAAATCCCTT 1264
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 ------------------------------------------------------------
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 GCCCGTCTTTTAAAAACTTGGTAATTGAAAAACCCTTGGTTTTCCCAATTTAATTCCCTT 1324
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 ------------------------------------------------------------
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 TAAAAAAAATCCCCTTTTCCCCATTTGGCTTATTACCAAAAAGCCCCCCCCCAATCCCCT 1384
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 ------------------------------------------------------------
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 TTCCAAAAATTTGCCAACCTTATACTTCCGGAATTTAAGGTTTTACCCTTAAAAAAAAAA 1444
consensus_15444#3 ------------------------------------------------------------
consensus_15444#1 ------------------------------------------------------------
consensus_15444#2 ------------------------------------------------------------
consensus_15444#0 AACCCTTTTTCCCTTTTTTGGGGTTTCCCAAATTATTTTTTTTACCC 1491
consensus_15444#3 -----------------------------------------------
consensus_15444#1 -----------------------------------------------
consensus_15444#2 -----------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||