cluster # 1546

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Oryza sativa
cluster # 1546 cluster # 1546 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1546#0 length = 629 sequences # 2

consensusID : consensus_1546#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 629
fasta sequence

                              [AACAACAGGAGATGAGACCACAGAATGCATTTCTCCATCAGCTAATATTCCTAATAAAGTAGAACTGCAAGGTTCACAGATTATTTCTGATCTTTCTAGTTTGAGAAAGGTTGAAGCAGAAAGCACCACACTAGAAGATACTGAAAGCAGATCTAGTTCTGCTAGTGGAGTCGAAATTAAGCTTGTGCCTGAGGCTATATACGAGCCAAGGGAAGAAGCAGAAGCAGTTGTTTCATTCTCAGAGTTCGTAGAAGAAATTCAATTTCAGTTTAGTGACAGTGAAAGCTTTGCTGATCGAAAGACCACAGATGATGCTGCATCTACTAAAGAGGCAGGTGCAGTAGAACATGATGAATCTGATTGTGACACAGAACAACAGGGAGGGAATAATACAGGTCTTGGAAATAACCTGGAAAACTGTTCTGATTCATCAAGGCCTGAGACTATCCCTGTTCCTATTCCAGGAAGTGAGTTTCACTCAGATGACAATAATCTGGAGGCTAAATCTCTACCAAATCTCCGCTCTCACATACATGATCTTGAAAGGTCTGACAGTTTTCAGCTAAGCCGCTCACTACAGTCGAACGGTGAAAATAATGGGGTTGAGCCAGTCAAGAGTACAACTTCTG]

[+] EMBL CF307210             [AACAACAGGAGATGAGACCACAGAATGCATTTCTCCATCAGCTAATATTCCTAATAAAGTAGAACTGCAAGGTTCACAGATTATTTCTGATCTTTCTAGTTTGAGAAAGGTTGAAGCAGAAAGCACCACACTAGAAGATACTGAAAGCAGATCTAGTTCTGCTAGTGGAGTCGAAATTAAGCTTGTGCCTGAGGCTATATACGAGCCAAGGGAAGAAGCAGAAGCAGTTGTTTCATTCTCAGAGTTCGTAGAAGAAATTCAATTTCAGTTTAGTGACAGTGAAAGCTTTGCTGATCGAAAGACCACAGATGATGCTGCATCTACTAAAGAGGCAGGTGCAGTAGAACATGATGAATCTGATTGTGACACAGAACAACAGGGAGGGAATAATACAGGTCTTGGAAATAACCTGGAAAACTGTTCTGATTCATCAAGGCCTGAGACTATCCCTGTTCCTATTCCAGGAAGTGAGTTTCACTCAGATGACAATAATCTGGAGGCTAAATCTCTACCAAATCTCCGCTCTCACATACATGATCTTGAAAGGTCTGACAGTTTTCAGCTAAGCCGCTCACTACAGTCGA                                             ]
[+] EMBL CF307045             [                                                                                                                                                   CAGATCTAGTTCTGCTAGTGGAGTCGAAATTAAGCTTGTGCCTGAGGCTATATACGAGCCAAGGGAAGAAGCAGAAGCAGTTGTTTCATTCTCAGAGTTCGTAGAAGAAATTCAATTTCAGTTTAGTGACAGTGAAAGCTTTGCTGATCGAAAGACCACAGATGATGCTGCATCTACTAAAGAGGCAGGTGCAGTAGAACATGATGAATCTGATTGTGACACAGAACAACAGGGAGGGAATAATACAGGTCTTGGAAATAACCTGGAAAACTGTTCTGATTCATCAAGGCCTGAGACTATCCCTGTTCCTATTCCAGGAAGTGAGTTTCACTCAGATGACAATAATCTGGAGGCTAAATCTCTACCAAATCTCCGCTCTCACATACATGATCTTGAAAGGTCTGACAGTTTTCAGCTAAGCCGCTCACTACAGTCGAACGGTGAAAATAATGGGGTTGAGCCAGTCAAGAGTACAACTTCTG]




>consensus_1546#0
AACAACAGGAGATGAGACCACAGAATGCATTTCTCCATCAGCTAATATTCCTAATAAAGT
AGAACTGCAAGGTTCACAGATTATTTCTGATCTTTCTAGTTTGAGAAAGGTTGAAGCAGA
AAGCACCACACTAGAAGATACTGAAAGCAGATCTAGTTCTGCTAGTGGAGTCGAAATTAA
GCTTGTGCCTGAGGCTATATACGAGCCAAGGGAAGAAGCAGAAGCAGTTGTTTCATTCTC
AGAGTTCGTAGAAGAAATTCAATTTCAGTTTAGTGACAGTGAAAGCTTTGCTGATCGAAA
GACCACAGATGATGCTGCATCTACTAAAGAGGCAGGTGCAGTAGAACATGATGAATCTGA
TTGTGACACAGAACAACAGGGAGGGAATAATACAGGTCTTGGAAATAACCTGGAAAACTG
TTCTGATTCATCAAGGCCTGAGACTATCCCTGTTCCTATTCCAGGAAGTGAGTTTCACTC
AGATGACAATAATCTGGAGGCTAAATCTCTACCAAATCTCCGCTCTCACATACATGATCT
TGAAAGGTCTGACAGTTTTCAGCTAAGCCGCTCACTACAGTCGAACGGTGAAAATAATGG
GGTTGAGCCAGTCAAGAGTACAACTTCTG

clustalw multiple alignements is not computed in this case