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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15464#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1259 fasta sequence
[CCTCCAAAAAAAAAC-GCCTTTTTTTTTCTTGAGCACACAAGAGACGCCAATCCCAAAGCAAAGAGAAGCGCAAAGATCATCTCTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA-TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC-AGAGTC-TT-GGTGT-GGCATTTTACCGGGGAGCTGACT-GCTGTGTTCTT-GTATATGATGTCAAT-GTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGT-GAGGAATTCCTAATTCAAGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTGTACTTGGAAACAAAATTGATGTTGATGGTGGTAATAGCCGGACTGTTTCTGAGAAGAAAGCTAAAGCTTGGTGTGCTTCTAAGGGAAACATCCCTTATTTTGAGACATCTGCTAAAGAAGGCTTCAACGTGGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATATATCTTCCTGATACAATTGATGTTGGAGGTGC-TGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT-ATCTATGTCCA-ATGCTACATATTGT-TTTTTTA-GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA-CAACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC-GTG-CCAGATCTGTATCTATATGGCTTGCTACTTGCTAAAAAAATACTTCCATTATGTCTTTGAAAAAAAAAAAAAAAACAC]
[+] EMBL OSS14644A [CCTCCAAAAAAAAAC GCCTTTTTTTTTCTTGAGCACACAAGAGACGCCAATCCCAAAGCAAAGAGAAGCGCAAAGATCATCTCTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGANCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTCAAGAGTC TT GGTGTNGGATTTTTACCGGGGAGCTGACT GCTGTGTTC ]
[+] EMBL AU174070 [CCTCCAAAAAAAAACAGCCTTTTTTTTTCTTGAGCACACAAGAGACGCCAATCCCAAAGCAAAGAGAAGCGCAAAGATCATCTCTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TT GGTGT GGCATTTTACCGGGGAGCTGACT GCTGTGTTCTT GTATATGATGTCAAT GTTACCA ]
[+] EMBL AK070320 [ AGCAAAGAGAAGCGCAAAGATCATCTCTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TT GGTGT GGCATTTTACCGGGGAGCTGACT GCTGTGTTCTT GTATATGATGTCAAT GTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGT GAGGAATTCCTAATTCAAGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTGTACTTGGAAACAAAATTGATGTTGATGGTGGTAATAGCCGGACTGTTTCTGAGAAGAAAGCTAAAGCTTGGTGTGCTTCTAAGGGAAACATCCCTTATTTTGAGACATCTGCTAAAGAAGGCTTCAACGTGGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATATATCTTCCTGATACAATTGATGTTGGAGGTGC TGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA CAACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC GTG CCAGATCTGTATCTATATGGCTTGCTACTTGCTAATACAATCCT ]
[+] EMBL AK059958 [ CGCAAAGATCATCTCTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TT GGTGT GGCATTTTACCGGGGAGCTGACT GCTGTGTTCTT GTATATGATGTCAAT GTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGT GAGGAATTCCTAATTCAAGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTGTACTTGGAAACAAAATTGATGTTGATGGTGGTAATAGCCGGACTGTTTCTGAGAAGAAAGCTAAAGCTTGGTGTGCTTCTAAGGGAAACATCCCTTATTTTGAGACATCTGCTAAAGAAGGCTTCAACGTGGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATATATCTTCCTGATACAATTGATGTTGGAGGTGC TGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA CAACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC GTG CCAGATCTGTATCTATATGGCTTGCTACTTGCTAATACAATCCTTC ]
[+] EMBL C74808 [ CATCTCTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGG GTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACATTTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTCTTT GGTGT GGCATTTTACCGGGGAGCTGACTNGCTGTGTCCTTGGTATATGATGTCAATGGTTACCAAGTCATTTGAAAGGCTCAANAGCTGGCG ]
[+] EMBL OSR23601A [ TCTCTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGG GTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTNATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TT GGTGT GGCATTTTACCGGGGAGCTGACT GCTGTGTTCTT GTATATGATGTCAAT GTT ]
[+] EMBL OSS14670A [ CTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGG GTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTNAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TTGGGTGT GGCATTTTACCGGGGAGCTGACT NCTGTGTTCTT GTATATGATGTCAAT GTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGT TAGG ATTCCTAATTCAAGNTAG CCATCAGATCCAGA ]
[+] EMBL AU056253 [ TCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TT GGTGT GGCATTTTACCGGGGAGCTGACT GCTGTGTTCTT GTATATGATGTCAAT GTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGTGGAGGAATTCCTAATTCAAGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTGTACTTGGAAACAAAATTGATGTTGATGGTGGTAATAGCCGGACTGTTTCTGAGAAGAAAGCTAAAGCTTGGTGTGCTTCTAAGGGAAACATCCCTTATTTTGAGACATCTGCTAAAGAAGGCTTCAACGTGGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATATATCTTCCTGATACAATTGATGTTGGAGGTGC TGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCAT ]
[+] EMBL CF309075 [ gagtagaaaCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAGGCGAATGCTTCTCAAGGTCATCATCCTCGGTGACAGCTGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TT GGTGT GGCATTTTACCGGG ]
[+] EMBL CF305140 [ TCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TT GGTGT GGCATTTTACCGGGGAGCTGACT GCTGTGTTCTT GTATATGATGTCAAT GTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGT GAGGAATTCCTAATTCAAGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTGTACTTGGAAACAAAATTGATGTTGATGGTGGTAATAGCCGGACTGTTTCTGAGAAGAAAGCTAAAGCTTG ]
[+] EMBL CA766593 [ caggggtnGCAATC GTACAAAGCGACGATCGGCGCGGATTTCCTGACC AGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TT GGTGT GGCATTTTACCGGGGAGCTGACT GCTGTGTTCTT GTATATGATGTCAAT GTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGT GAGGAATTCCTAATTCAAGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTGTACTTGGAAACAAAATTGATGTTGATGGTGGTAATAGCCGGACTGTTTCTGAGAAGAAAGCTAAAGCTTGGTGTGCTTCTAAGGGAAACATCCCTTATTTTGAGACATCTGCTAAAGAAGGCTTCAACGTGGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATATATCTTCCTGATACAATTGATGTTGGAGGTGCTTGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGNTTGATTGCTGCA ]
[-] EMBL CF334082 [ GGTAATAGCCGGACTGTTTCTGAGAAGAAAGCTAAAGCTTGGTGTGCTTCTAAGGGAAACATCCCTTATTTTGAGACATCTGCTAAAGAAGGCTTCAACGTGGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATATATCTTCCTGATACAATTGATGTTGGAGGTGC TGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTAaaaaaa ]
[+] EMBL AU056254 [ TTGAGACATCTGCTAAAGAAGGCTTCAACGTGGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATATATCTTCCTGATACAATTGATGTTGGAGGTGC TGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA CAACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC GTG CCAGATCTGTATCTATATGGCTTGCTACTTGCTAAAAAA ]
[+] EMBL AU096657 [ TAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATATATCTTCCTGATACAATTGATGTTGGAGGTGC TGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA CAACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC GTG CCAGATNTGTATCTATATGGCTTGCTACTTGCTAAAAAAAaaa ]
[+] EMBL BM038537 [ GCTTTCAAG ATGAACCGGAAGAGGAGATATATCTTCCTGAT AATTGATGTTGGAGGTGC TGGAAGGC ACAGCGCTCGTCA GCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCNCACCTCTTCCCCTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCC ACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCNTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCCAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA C ACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC GTG CCAGATCTGTATCTATATGGCTTGCTACTTGCTAATACAATCCTTCCATTATGTCTTTGAAAAAAAAAA ]
[-] EMBL CF295449 [ GTTGGAGGTGC TGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCCGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGAATGATTCAGTGCATATCTGGAAAAAACAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA CAACCTATCAATATGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC GTG CCAGATCTGTATCTATATGGCTTGATACTTGCTAATACAATACTTCCATTATGTCTAAAAAAAAAAAAAAAAAAACAC]
[+] EMBL AU174071 [ AGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCNCTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA CAACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGCGGTG CCAGATCTGTATCTATATGGCTTGCTACTTGCTAAAAAAAaaa ]
[+] EMBL AU184462 [ GATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA CAACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC GTG CCAGATCTGTATCTATATGGCTTGCTACTTGCTAAAAAAAa ]
[+] EMBL BI809721 [ GCCTCTGATCTATGTCCACATGCGACATATTGTGTTTTTTAGGTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGA TTGGGATACC TTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCCAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAACCAACCTATCCATCTGGTTCTGTTCTCTGCCCCTTTTGATGGTAGAGC GTGCCCAGATCTGTATCTATATGGCTTGCTACTTGCTAAAAAAAaaa ]
[-] EMBL CF309074 [ AGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA CAACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC GTG CCAGATCTGTAaaaaaaaaa ]
consensusID : consensus_15464#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 274 fasta sequence
[TAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGTTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTCTTGCCGTTCCTTACCAAAGGGCAAATTCT]
[+] EMBL CF297891 [TAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGTTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTCTTGCCGTTCCTTACCAAAGGGCAAATTCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15464#0 CCTCCAAAAAAAAACGCCTTTTTTTTTCTTGAGCACACAAGAGACGCCAATCCCAAAGCA 60
consensus_15464#1 ------------------------------------------------------------
consensus_15464#0 AAGAGAAGCGCAAAGATCATCTCTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCC 120
consensus_15464#1 ------------------------------------------------------------
consensus_15464#0 TCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAG 180
consensus_15464#1 ------------------------------------------------------------
consensus_15464#0 GCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGAT 240
consensus_15464#1 ------------------------------------------------------------
consensus_15464#0 GAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTT 300
consensus_15464#1 ------------------------------------------------------------
consensus_15464#0 CCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACATTGCAGATTTGGGACACAGC 360
consensus_15464#1 ------------------------------------------------------------
consensus_15464#0 GGGACAGGAGCGATTTCAGAGTCTTGGTGTGGCATTTTACCGGGGAGCTGACTGCTGTGT 420
consensus_15464#1 ------------------------------------------------------------
consensus_15464#0 TCTTGTATATGATGTCAATGTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGTGAGGA 480
consensus_15464#1 ------------------------------------------------------------
consensus_15464#0 ATTCCTAATTCAAGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTGTACTTGGAAA 540
consensus_15464#1 ------------------------------------------------------------
consensus_15464#0 CAAAATTGATGTTGATGGTGGTAATAGCCGGACTGTTTCTGAGAAGAAAGCTAAAGCTTG 600
consensus_15464#1 ------------------------------------------------------------
consensus_15464#0 GTGTGCTTCTAAGGGAAACATCCCTTATTTTGAGACATCTGCTAAAGAAGGCTTCAACGT 660
consensus_15464#1 ------------------------------------------------------------
consensus_15464#0 GGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGAT 720
consensus_15464#1 ------------------------------------------------------------
consensus_15464#0 ATATCTTCCTGATACAATTGATGTTGGAGGTGCTGGAAGGCAACAGCGCTCGTCAGGCTG 780
consensus_15464#1 ------------------------------------------------------------
consensus_15464#0 TGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAG 840
consensus_15464#1 ------------------------------------------------------------
consensus_15464#0 ATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCTATCTATGT 900
consensus_15464#1 ------------------------------------------------------------
consensus_15464#0 CCAATGCTACATATTGTTTTTTTAGTGCTCCAACATAATTGGAGAAGATTCATTTGTAAC 960
consensus_15464#1 --------------------------------------------------------TAAC 4
****
consensus_15464#0 TGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTT 1020
consensus_15464#1 TGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTT 64
************************************************************
consensus_15464#0 TCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGC 1080
consensus_15464#1 TCTACCCTTCTGTTTGATTGTTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGC 124
******************** ***************************************
consensus_15464#0 ATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAACAACCTATC 1140
consensus_15464#1 ATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAACAAAAAAAA 184
****************************************************** *
consensus_15464#0 AATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGCGTGCCAGATCTGTATCTATATG 1200
consensus_15464#1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCT-TG 243
** * * * * * * * * * **
consensus_15464#0 GCTTGCTACTTGCTAAAAAAATACTTCCATTATGTCTTTGAAAAAAAAAAAAAAAACAC 1259
consensus_15464#1 TCTTGCCGTTCCTTACCAAAGGGCAAATTCT---------------------------- 274
***** * ** *** * *
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||