These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15508#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 862 fasta sequence [ACCACAAGCCTAGCGAGCTTGGTTGATTTTTCGTGTGCGTGCGGTTGTGTAGGCGAAATCCTCCGGTTTTTTCTCGTAGTTTGGGATCGATCGATGGCGTCGTTGGGTGGTGGTGGTGGTGGGCAGGGGCCGCCCAACGGCAGCGGCGTCCCAACCAACCGGCCGGTGTTCACCATCGAGGGCCGTGTCGTGGAGCCGCCCACCCTTACCGCGGCGCA-N-TG-G-ACATGATTAGGTCAATGTATCTCTCGTCGCTTGGTGTGCCACCTGTCAAC-GGATTCTATCCGGGCGC-AGTAC-AGTACCC-GAGAGGAGTGTTCGTCCCTTCA-AACGAGTACGAGGCGGCAGGGGCAACTCGGG-C-TGCCAAAAGGGCCAAGCAGACTGACATTTCCGCTGAGAAC-GAGCTGGCCGCGAAGACCACCGG-CACCACCCCACCACCAGCCGCGCCGAAGAAGTGATGCCCGCGAGATGGATACATGGCGCGC-GCGGCCGGCCGGCGTCGAGCTCCATCGATTCCTCCGGCGACCGGCCGGCGTGCGTGCAGGCGACCGACCCAGCGAGCGAACGAATAAAATCAGGGGCGCCTCCAGCCGGGCGGCCTCTGAGCGTTACTATCTACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTGCGTGATAATTAAATAAGTGAGACCCGGCAGAAACCATGCGTTTGTGTGTGGTGTGTGGCATGGTGGACAACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGA-TCGATAGATATGCTCGCCTGCAGTGTGTTGTGGTTTTTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK107966 [ACCACAAGCCTAGCGAGCTTGGTTGATTTTTCGTGTGCGTGCGGTTGTGTAGGCGAAATCCTCCGGTTTTTTCTCGTAGTTTGGGATCGATCGATGGCGTCGTTGGGTGGTGGTGGTGGTGGGCAGGGGCCGCCCAACGGCAGCGGCGTCCCAACCAACCGGCCGGTGTTCACCATCGAGGGCCGTGTCGTGGAGCCGCCCACCCTTACCGCGGCGCAGC TG G ACATGATTAGGTCAATGCATCTCTCGTCGCTTGGTGTGCCACCTGTCAAC GGATTCTATCCGGGCGC AGTAC AGTACCC GAGAGGAGTGTTCGTCCCTTCA AACGAGTACGAGGCGGCAGGGGCAACTCGGG C TGCCAAAAGGGCCAAGCAGACTGACATTTCCGCTGAGAAC GAGCTGGCCGCGAAGACCACCGG CACCACCCCGCCACCAGCCGCGCCGAAGAAGTGATGCCCGCGAGATGGATACATGGCGCGC GCGGCCGGCCGGCGTCGAGCTCCATCGATTCCTCCGGCGACCGGCCGGCGTGCGTGCAGGCGACCGACCCAGCGAGCGAACGAATAAAATCAGGGGCGCCTCCAGCCGGGCGGCCTCTGAGCGTTACTATCTACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTGCGTGATAATTAAATAAGTGAGACCCGGCAGAAACCATGCGTTTGTGTGTGGTGTGTGGCATGGTGGACAACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGA TCGATAGATATGCTCGCCTGCAGTGTGTTGT ] [+] EMBL OSC147 [ GCCTAGCGAGCTTNGTTGATTTTTCGTGTGCGTNCGGTTGTGTAGGCGAAATCCTCCGGTTTTTTCTCGTAGTTTGGGATCGATCGATNGCGTCGTTGGGTNGTGGTGGTNGTNGGCAGGGG CGCCCAACGG AGCNGCNTCCCAACCAACCGGCCGGTGTTCACCATCGAGGGCCGTGTCGTNGAGCCGCCCACCCTTACCGCNGCGCA N TG G ACATGATTAGGTCAATGTATCTCTCGTCGCTTGGTGTNCCACCTGTCAAC GGATTCTATCCGGGCGC AGTACAAGTACCC GAGAGGAGTGTTCGTCCCTTCA AACGAGTA ] [+] EMBL OSC2301 [ AGCTTGGTTGATTTTTCGTGTGCGTGCGGTTGTGTAGGCGAAATCCTCCGGTTTTTTCTCGTAGTTTGGGATCGATCGATGGCGTCGTTGGGTGGTGGTGGTGGTGGGCAGGGGCCGCCCAACGGCAGCGGCGTCCCAACCAACCGGCCGGTGTTCACCATCGAGGGCCGTGTCGTGGAGCCGCCCACCCTTACCGCGGCGCA G TG G ACATGATTAGGTCAATGTATCTCTCGTCGCTTGGTGTGCCACCTGTCAAC GGATTCTATCCGGGCGC AGTAC AGTACCC GAGAGGAGTGTTCGTCCCTTCA AACGAGTACGAGGCGGCAGGGGCAACTCGGG CTTGCCAAAAGGGCCAAGCAGACTNACATTTNCGCTGAGAAC GAGCTTGCCGCGAAGACCACCGG CACCA CCCACCACCAGCCG GCCGAAGAAGTNATTCCC ] [+] EMBL OSC469 [ TGTGCGTGCGGTTGTGTAGGCGAAATCCTCCGGTTTTTTCTCGTAGTTTGGGATCGATCGATGGCGTCGTTGGGTGGTGGTNGTGGTGGGCAGGGGCCGCCCAACGGCAGCGG GTCCCAACCAACCGGCCGGTGTTCACCATCGAGGGCCGTNTCGTGGAGCCGCCCACCCTTACCGCGGCGCA N TG GTACATGATTAGGTCAATGTATCTCTCGTCGGTTGGTNTGCCACCTGTCAAC GGATTCTATCCGGGCGC AGTAC AGTACCC GAGAGGAGTGTTCGTCCCTTCA AACGAGTACGAGGCGGCAGGGGCAACTCGGGNC TGCCAAAAGGGCCAAGCAGACTGACATTTCCGCTGAGAACGGAGCTGGCCGCGAAGACCACCGGNGACCACCCCACCACCAGCCGCGCCGAAGAAGTGATGCCCGTGAGA ] [+] EMBL OSC3151 [ TGTGCGTGCGGTTGTGTAGGCGAAATCCTCCGGTTTTTTCTCGTAGTTTGGGATCGATCGATGGCGTCGTTGGGTGGTGGTGGTGGTGGGCAGGGGCCGCCCAACGGCAGCGGCGTCCCAACCAACCGGCCGGTGTTCACCATCGAGGGCCGTGTCGTGGAGCCGNCCACCCTTACCGCGGCGCA N TG G ACATGATTAGGTCAATGTATCTCTCGTCGCTTGGTGTGCCACCTGTCAAC GGATTCTATCCGGGCGC AGTAC AGTACCC GAGAGGAGTGTTCGTCCCTTCA AACGAGTACGAGGCGGCAGGGGCAACTCGGG CTTNCCAAAAGGGCCAAGCAGACTNACATTTCCGCTGAGAAC GAGCTGGCCGCGAAGA ] [+] EMBL OSC463 [ TGTGCGTGCGGTTGTGTAGGCGAAATCCTCCGGTTTTTTCTCGTAGTTTGGGATCGATCGATGGCGTCGTTGGGTNGTGGTGGTGGTNGGCAGGGG CGCCCAAC GCAGC GNGTCCCAACCAACCGGCCGGTGTTCACCATCGAGGGCCGTGTCGTGGAGCCGCCCACCCTTACCGCGGCG A N TG G ACATGATTAGGTCAATGTATCTCTCGTCGCTTGGTGTGCCACCTGTCAAC GGATTCTATCCGGGCGC AGTAC AGTACCC GAGAGGAGTGTTCGTCCCTTCA AACGAGTACGAGGCGGCAGGGGCAACTCGGG C TNGCAAAAGGGCCAAGCAGACTGACATTTCCG TTAGAAC GAG TTGCCGCGAAGACCAn ] [+] EMBL AU164033 [ cCGGCGCA NCTG G ACATGATTAGGTCAANGTATCTCTCGTCGCTTGGTGTGCCACCTGTC AC GGATTCTATCCGGGCNC AGTCC AGTACCC GANAGGAGTGTTCGTCCCTTCA AACGAGTACNA GCGGCAGGGGCAACTCGGG C TGCCAAAAGGGCCAAGCAGACTGACATTTCCGCTGAGAAC GAGCTGGCCGCGAAGACCACCGG CACCACCCCACCACCAGCCGCGCCGAAGAAGTGATGCCCGCGAGATGGATACATGGCGCGC GCGGCCGGCCGGCGTCGAGCTCCATCGATTCCTCCGGCGACCGGCCGGCGTGCGTGCAGGCGACCGACCCAGCGAGCGAACGAATAAAATCAGGGGCGCCTCCAGCCGGGCGGCCTCTGAGCGTTACTATCTACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTGCGTGATAATTAAATAAGTGAGACCCGGCAGAAACCATGCGTTTGTGTGTGGTGTGTGGCATGGTGGACAACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGA TCGATAGATATGCTCGCCTGCAGTGTGTTGTGGTTTTTAATAAAAAAAAAAAAAAAAAAAAAAAA ] [+] EMBL OSC2751 [ GCA N TGNG ACATGATTAGGTCAATGTATCTCTCGTCGCTTGGTGTGCCACCTGTCAAC GGATTCTATCCGGGCGC AGTAC AGTACCC GAGAGGAGTGTTCGTCCCTTCA AACGAGTACGAGGCGGCAGGGGCAACTCGGG C TGCCAAAAGGGCCAAGCAGACTGACATTTCCGCTGAGAAC GAGCTGGCCGCGAAGACCACCGG CACCACCCCACCACCAGCCGCGCCGAAGAAGTGATGCCCGCGAGATGGATACATGG ] [+] EMBL BI795566 [ gcGCCACCTGTCAACGGGATTCTATCCGGGCGCAAGTAC AGTACCCGGAGAGGAGTGTTCGTCCCTTCAGAACGAGTACGA GC GCA GGGC ACTC GG C T CCAAAAGGGCCAA CAGACTGACATTTCCGCTGAGAAC GAGCTGGCCGCGAAGACCACCGG CACCACCCCACCACCAGCCGCGCCGAAGAAGTGATGCCCGCGAGATGGATACATGGCGCGCAGCGGCCGGCCGGCGTCGAGCTCCATCGATTCCTCCGGCGACCGGCCGGCGTGCGTGCAGGCGACCGACCCAGCGAGCGAACGAATAAAATCAGGGGCGCCTCCAGCCGGGCGGCCTCTGAGCGTTACTATCTACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTGCGTGATAATTAAATAAGTGAGACCCGGCAGAAACCATGCGTTTGTGTGTGGTGTGTGGCATGGTGGACAACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGA TCGATAGATATGCTCGCCTGCAGTGTGTTGTGGTTTTTAATAAAAAAA ] [+] EMBL BI799920 [ AGTACCC GAGAGGAGTGTTCGTCCCTTCA AACGAGTACGA GCGGCA GGGCAGCTCGGG C TGCCAAAAGGGCCAAGCAGACTGACATTTCCGCTGAGAAC GAGCTGGCCGCGAAGACCACCGG CACCACCCCACCACCAGCCGCGCCGAAGAAGTGATGCCCGCGAGATGGATACATGGCGCGC GCGGCCGGCCGGCGTCGAGCTCCATCGATTCCTCCGGCGACCGGCCGGCGTGCGTGCAGGCGACCGACCCAGCGAGCGAACGAATAAAATCAGGGGCGCCTCCAGCCGGGCGGCCTCTGAGCGTTACTATCTACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTGCGTGATAATTAAATAAGTGAGACCCGGCAGAAACCATGCGTTTGTGTGTGGTGTGTGGCATGGTGGAC ACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGACTCGATAGATATGCTCGCCTGCAGTGTGTTGTGGTTTTTAATAAAAAA ] [+] EMBL BI798339 [ TTCGTCCCTTCA AACGAGTACGA GC GCA GGGCAGCTC GG C T CCAAAAGGGCCAA CAGACTGACATTTCCGCTGAGAAC GAGCT GCCGCGAAGACCACCGG CACCACCCCACCACCAGCCGCGCCGAAGAAGTGATGCCCGCGAGATGGATACATGGCGCGC GCGGCCGGCCGGCGTCGAGCTCCATCGATTCCTCCGGCGACCGGCCGGCGTGCGTGCAGGCGACCGACCCAGCGAGCGAACGAATAAAATCAGGGGCGCCTCCAGCCGGGCGGCCTCTGAGCGTTACTATCTACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTGCGTGATAATTAAATAAGTGAGACCCGGCAGAAACCATGCGTTTGTGTGTGGTGTGTGGCATGGTGGACAACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGA TCGATAGATATGCTCGCCTGCAGTGTGTTGTGGTTTTTAAAAAAAAAA ] [+] EMBL BI795764 [ GCCAAGCAGACTGACATTTCCGCTGAGAAC GAGCT GCCGCGAAGACCACCGG CACCACCCCACCACCAGCCGCGCCGAAGAAGTGATGCCCGCGAGATGGATACATGGCGCGC C GCCGGCCGGCGTCGAGCTCCATCGATTCCTCCGGCGACCGGCCGGCGTGCGTGCAGGCGACCGACCCAGCGAGCGAACGAATAAAATCAGGGGCGCCTCCA CCGGGCGGCCTCTGAGCGTTACTATCTACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTGCGTGATAATTAAATAAGTGAGACCCGGCAGAAACCATGCGTTTGTGTGTGGTGTGTGGCATGGTGGACAACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGA TCGATAGATATGCTCGCCTGCAGTGTGTTGTGGTTTTTAAAAAAA ] [+] EMBL C99215 [ TGGATACATGGCGCGC GCGGCCGGCCGGCGTCGAGCTCCATCGATTCCTCCGGCGACCGGCCGGCGTGCGTGCAGGCGACCGACCCAGCGAGCGAACGAATAAAATCAGGGGCGCNTCCAGCCGGGCGGCCTNTGAGCGTTACTATCTACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTGCGTGATAATTAAATAAGTGAGACCCGGCAGAAACCATGCGTTTGTGTGTGGTGTGTGGCATGGTGGACAACTCATATGCCGGTTGATTTNCCTGTATGTACTCTGTGTGAATGTGTGA TCGNTAGATATGNTCGCCTGCAGTGTGTTGTGGTTTTTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_15508#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 678 fasta sequence [TCACCATCAAGGGCCGTGTCGTGAANCCGGCCCACCCTTACCGCGGCGCAGCTGGACATGATTAGGTCAATGTATCTCTCGTCGCTTGGTGTGCCACCTGT-CAACGGATT-CT-ATCCGGGCGCAGTAC-AGTA-CCCGAGAGGAGTGTTCGTCCCTTCAAACGA-GTA-CGAGGCGGCAGGGGCAGCTCGGGCTG-CCAAAAGGGCCAAGCAGACT-GACATTTCCGCTGAGAACGAGCTGGCCGC-GAAGACCACC-GGCAC-CACCCCACCACCAGCCGCGCCGAAGAAGTGATGCCCGCGAGATGGATACATGGC-GCGC-GCGGC-C-GGCCGGCGTCGAGCTCCATCGATTCCTCCGGCGACCGGC-CGGCGTGCGTGCAGGCGACCGACCCAGCGAGCGAACGAATAAAATCAGGGGCGCCTCCAGCCGGGCGGCCTCTGAGCGTTACTATCTACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTGCGTGATAATTAAATAAGTGAGACCCGGCAGAAACCATGCGTTTGTGTGTGGTGTGTGGCATGGTGGACAACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGATCGATAGATATGCTCGCCTGCAGTGTGTTGTGGTTTTTAATAATTTGGTGTGTTCGCGTGTGTGAAAAAATTT] [+] EMBL AU085950 [TCACCATCAAGGGCCGTGTCGTGAANCCGGCCCACCCTTACCGCGGCGCAGCTGGACATGATTAGGTCAATGTATCTCTCGTCGCTTGGTGTGCCACCTGT CAACGGATT CT ATCCGGGCGCAGTAC AGTA CCCGAGAGGAGTGTTCGTCCCTTCAAACGA GTA CGAGGCGGCAGGGGCAACTCGGGCTG CCAAAAGGGCCAAGCAGACT GACATTTCCGCTGAGAACGAGCTGGCCGC GAAGACCACC GGCAC CACCCCACCACCAGCCGCGCCGAAGAAGTGATGCCCGCGAGATGGATACATGGC GCGC GCGGC C GGCCGGCGTCGAGCTCCATCGATTCCTCCGGCGACCGGC CGGCGTGCGTGCAGGCGACCGACCCAGCGAGCGAACGAATAAAATCAGGGGCGCCTCCAGCCGGGCGGCCTCTGAGCGTTACTATCTACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTGCGTGATAATTAAATAAGTGAGACCCGGCAGAAACCATGCGTTTGTGTGTGGTGTGTGGCATGGTGGACAACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGATCGATAGATATGCTCGCCTGCAGTGTGTTGTGGTTTTTAATAATTTGGTGTGTTCGCGTGTGTGAAAAA ] [+] EMBL BI795980 [ ggtgcaccCCACCTGTACCA GGATTGCTAATCCGGGCGCAGTACAAGTACCCCGAGAGGA TGTTCGTCCCTTCAAACGAGGTA CGAGGCGGCA GGGCAGCTC GGCTGCCCAAAAAGGCCAAGCAGACTGGACATTTCCGCTGAGAACGAGCT GCCGCAGAAGACCACCGGGCACACACCCCACCACCAGCCGCGCCGAAGAAGTGATGCCCGCGAGATGGATACATGGCAGCGCAGCAGCACAGGCCGGCGTCGAGCTCCATCGATTCCTCCGGCGACCGGCACGGCGTGCGTGCAGGCGACCGACCCAGCGAGCGAACGAATAAAATCAGGGGC CCTCCA CCCGGCGCCCTCTGAGCGTTACTATCTACTACTATTACCTGTAGTTTTGCTATTTTCAGCGTGAAGACTGCGTGATAATTAAATAAGTGAGACCCGCAAGAAACCATGCGTTTGTGTGTGGTGTGT GCATGGTGGACAACTCATAT CCGGTTGATTTACCTGTATGTACTCTGTG GAATGTGTGATCG ] [+] EMBL BI799696 [ TCCGGGC CAGTAC AGTA CCCGAGAGGAGTGTTCGTCCCTTCAAACGA GTA CGA GCGGCAGGGGCAGCTCGGGCTG CCAAAAGGGCCAAGCAGACT GACATTTCCGCTGAGAACGAGCTGGCCGC GAAGACCACC GGCAC CACCCCACCACCAGCCGCGCCGAAGAAGTGATGCCCGCGAGATGGATACATGGC GCGC GCGGC C GGCCGGCGTCGAGCTCCATCGATTCCTCCGGCGACCGGC CGGCGTGCGTGCAGGCGACCGACCCAGCGAGCGAACGAATAAAATCAGGGGCGCCTCCAGCCGGGCGGCCTCTGAGCGTTACTATCTACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTGCGTGATAATTAAATAAGTGAGACCCGGCAGAAACCATGCGTTTGTGTGTGGTGTGTGGCATGGTGGACAACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGATCGATAGATATGCTCGCCTGCAGTGTGTTGTGGTTTTTAATAATTTGGTGTGTTCGCGTGTGTGAAAAAA ] [+] EMBL BI797867 [ GAGAGGAGTGTTCGTCCCTTCATACGA GTAGCGAGCTGGCA GGGCAGCTCGGGCTG CCAAAAGGGCCAAGCAGACT GACATTTCCGCTGAGAACGAGCTGGCCGC GAAGACCACCAGGCAC CACCCCACCACCAGCCGCGCCGAAGAAGTGATGCCCGCGAGATGGATACATGGC GCGC GC GC C GGCCGGCGTCGAGCTCCATCGATTCCTCCGGCGACCGGC CGGCGTGCGTGCAGGCGACCGACCCAGCGAGCGAACGAATAAAATCAGGGGCGCCTCCAGCCGGGCGGCCTCTGAGCGTTACTATCTACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTGCGTGATAATTAAATAAGTGAGACCCGGCAGAAACCATGCGTTTGTGTGTGGTGTGTGGCATGGTGGACAACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGATCGATAGATATGCTCGCCT CAGTGT TT T GTTTTTAATAA ] [+] EMBL BI797117 [ CTTTGAGCGTTACTATCTACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTGCGTGATAATTAAATAAGTGAGACCCGCCAGAAACCCTGCGTTTGTGTGTGGTGTGTGGCCTGGTGGACCACTCATATGCCGGTTGATTTACCCGTATGTACTCTGTGTGAAAGTGTGATCGATAGATATGCTCGCCTCCAGTGTGTTGTGGTTTTTAATAATTTGGTGTGTTCGCGTGTGTGAtcttgttt] consensusID : consensus_15508#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 527 fasta sequence [GCCTAGCGAGCTTGGTTGATTTTTCGTGTGCGTCGGTTGTGTAGCGAAATCCTCCGGTTTTTTCTCGTAGTTTGGGATCGATCGATGGCGTCGTTGGGTGGTGTGTGTGGTGGCAGGGCCGCCCAACGGCAGCGGCGTCCCAACCAACCGGCCGGTGTTCACCATCGAGGGCCGTGTCGTGGAGCCGCCCACCCTTACCGCGGCGCAGCTGGACATGATTAGGGGCGCAGTACAGTACCCGAGAGGAGTGTTCGTCCCTTCAAACGAATAAAATCAGGGGCGCCTCCAGCCGGGCGGCCTCTGAGCGTTACTATC-TACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTGCGTGATAATTAAATAAGTGAGACCCGGCAGAAA-CCATGCGTTTGTGTGTGGTGTGTGGCATGGTGGACACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGATCGATAGATATGCTCGCCTGCAGTGTGTTGTGGTTTTTAATAAAAAAAAAA] [+] EMBL BI800211 [GCCTAGCGAGCTTGGTTGATTTTTCGTGTGCGTCGGTTGTGTAGCGAAATCCTCCGGTTTTTTCTCGTAGTTTGGGATCGATCGATGGCGTCGTTGGGTGGTGTGTGTGGTGGCAGGGCCGCCCAACGGCAGCGGCGTCCCAACCAACCGGCCGGTGTTCACCATCGAGGGCCGTGTCGTGGAGCCGCCCACCCTTACCGCGGCGCAGCTGGACATGATTAGGGGCGCAGTACAGTACCCGAGAGGAGTGTTCGTCCCTTCAAACGAATAAAATCAGGGGCGCCTCCAGCCGGGCGGCCTCTGAGCGTTACTATC TACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTGCGTGATAATTAAATAAGTGAGACCCGGCAGAAA CCATGCGTTTGTGTGTGGTGTGTGGCATGGTGGACACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGATCGATAGATATGCTCGCCTGCAGTGTGTTGTGGTTTTTAATAAAAAAAAAA] [+] EMBL BI799954 [ cacGGGGCGCCTCCAGCCGGGCGGCCTCTGAGCGTTACTATCTTACTACTAATAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTGCGTGATAATTAAATAAGTGAGACCC GCAGAAACCCATGCGTTTGTGTGTGGTGTGTGGCATGGTGGACACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGA CGATA ATA GCTCGCC CAGTGTG TGTGGTTTTTAATAAAAA ] consensusID : consensus_15508#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 447 fasta sequence [ACCGAGCGGCAGGGCCAGCTCGGCTCCCAAAAGGCCCAACCAGACTGACATTTCCGCTGAGAACGACTGCCGCGAAGACCACCGCACCACCCCCACCACCACCGGCGCCGAAGAAGTGACCCCGCGAGAGGAATACATGGCGCGCCGCCGCCGGCGTCGAGCTCCATCGATTCCTCCGGCGACCGCCGCGTGCGTCAGGCGACCGACCCAGCGAGCGAACGAATAATCAGGGGCCCTCCACCGGCGCCTTGAGCGTTACTATTATACTATTACTGTATTTTCTATTTTCAGCTGAAGCTGCGTGATAATTAAATAAGTGAGACCCGCAGAAACCATGCTTTGTGTTGTTTGCATGGTGACAACTCATACCGTTGATTTACCGTAGTACTCTGGTGAATGTGTGATCGATAAATAGCTCCCCCAGTGTGTTGTGGTTTTAAAAAAAAA] [+] EMBL BI797439 [ACCGAGCGGCAGGGCCAGCTCGGCTCCCAAAAGGCCCAACCAGACTGACATTTCCGCTGAGAACGACTGCCGCGAAGACCACCGCACCACCCCCACCACCACCGGCGCCGAAGAAGTGACCCCGCGAGAGGAATACATGGCGCGCCGCCGCCGGCGTCGAGCTCCATCGATTCCTCCGGCGACCGCCGCGTGCGTCAGGCGACCGACCCAGCGAGCGAACGAATAATCAGGGGCCCTCCACCGGCGCCTTGAGCGTTACTATTATACTATTACTGTATTTTCTATTTTCAGCTGAAGCTGCGTGATAATTAAATAAGTGAGACCCGCAGAAACCATGCTTTGTGTTGTTTGCATGGTGACAACTCATACCGTTGATTTACCGTAGTACTCTGGTGAATGTGTGATCGATAAATAGCTCCCCCAGTGTGTTGTGGTTTTAAAAAAAAA] consensusID : consensus_15508#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 140 fasta sequence [GTGTGGTGTGTGGCATGGTGGACAACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGATCGATAGATATGCTCGCCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU094491 [GTGTGGTGTGTGGCATGGTGGACAACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGATCGATAGATATGCTCGCCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15508#2 ------------------------------------------------------------ consensus_15508#4 ------------------------------------------------------------ consensus_15508#0 ACCACAAGCCTAGCGAGCTTGGTTGATTTTTCGTGTGCGTGCGGTTGTGTAGGCGAAATC 60 consensus_15508#1 ------------------------------------------------------------ consensus_15508#3 ------------------------------------------------------------ consensus_15508#2 ------------------------------------------------------------ consensus_15508#4 ------------------------------------------------------------ consensus_15508#0 CTCCGGTTTTTTCTCGTAGTTTGGGATCGATCGATGGCGTCGTTGGGTGGTGGTGGTGGT 120 consensus_15508#1 ------------------------------------------------------------ consensus_15508#3 ------------------------------------------------------------ consensus_15508#2 ------------------------------------------------------------ consensus_15508#4 ------------------------------------------------------------ consensus_15508#0 GGGCAGGGGCCGCCCAACGGCAGCGGCGTCCCAACCAACCGGCCGGTGTTCACCATCGAG 180 consensus_15508#1 -------------------------------------------------TCACCATCAAG 11 consensus_15508#3 ------------------------------------------------------------ consensus_15508#2 ------------------------------------------------------------ consensus_15508#4 ------------------------------------------------------------ consensus_15508#0 GGCCGTGTCGTGGAGCCGCCCACCCTTACCGCGGCGCANTGGACATGATTAGGTCAATGT 240 consensus_15508#1 GGCCGTGTCGTGAANCCGGCCCACCCTTACCGCGGCGCAGCTGGACATGATTAGGTCAAT 71 consensus_15508#3 ------------------------------------------------------------ consensus_15508#2 ---------------------------------------------------------GCC 3 consensus_15508#4 ------------------------------------------------------------ consensus_15508#0 ATCTCTCGTCGCTTGGTGTGCCACCTGTCAACGGATTCTATCCGGGCGCAGTACAGTACC 300 consensus_15508#1 GTATCTCTCGTCGCTTGGTGTGCCACCTGTCAACGGATTCTATCCGGGCGCAGTACAGTA 131 consensus_15508#3 ------------------------------------------------------------ consensus_15508#2 TAGCGAGCTTGGTTGATTTTTCGTGTGCGTCGGTTGTGTAGCGAAATCCTCCGGTTTTTT 63 consensus_15508#4 ------------------------------------------------------------ consensus_15508#0 CGAGAGGAGTGTTCGTCCCTTCAAACGAGTACGAGGCGGCAGGGGCAACTCGGGCTGCCA 360 consensus_15508#1 CCCGAGAGGAGTGTTCGTCCCTTCAAACGAGTACGAGGCGGCAGGGGCAGCTCGGG-CTG 190 consensus_15508#3 --------------------------------ACCGAGCGGCAGGGCCAGCTCGG--CTC 26 consensus_15508#2 CTCGTAGTTTGGGATCGATCGATGGCGTCGTTGGGTGGTGTGTGTGGTGGCAGGGCCGCC 123 consensus_15508#4 ------------------------------------------------------------ consensus_15508#0 AAAGGGCCAAGCAGACTGACATTTCCGCTGAGAACGAGCTGGCCGCGAAGACCACCGGCA 420 consensus_15508#1 CCAAAAGGGCCAAGCAGACTGACATTTCCGCTGAGAACGAGCT--GGCCGCGAAGACCAC 248 consensus_15508#3 CCAAAAGGCCCAACCAGACTGACATTTCCGCTGAGAACGACT----GCCGCGAAGACCAC 82 consensus_15508#2 CAACGGCAGCGGCGTCCCAACCAACCGGCCGGTGTTCACCATCGAGGGCCGTGTCGTGGA 183 consensus_15508#4 ------------------------------------------------------------ consensus_15508#0 CCACCCCACCACCAGCCGCGCCGAAGAAGTGATGCCCGCGAGATGGATACATGGCGCGC- 479 consensus_15508#1 CGGCACCACCCC-ACCACCAGCCGCGCCGAAGAAGTGATGCCCGCGAGATGGATACATGG 307 consensus_15508#3 CG-CACCACCCCCACCACCACCGGCGCCGAAGAAGTGAC-CCCGCGAGAGGAATACATGG 140 consensus_15508#2 GCCGCCCACCCTTACCGCGGCGCAGCTGGACATGATTAGGGGCGCAGTAC---AGTACCC 240 consensus_15508#4 ------------------------------------------------------------ consensus_15508#0 GCGGCCGGCCGGCGTCGAGCTCCATC--GATTCCTCCGGCGACCGGCCGG---CGTGCGT 534 consensus_15508#1 CGCGCGCGGCCGGCCGGCGTCGAGCTCCATCGATTCCTCCGGCGACCGGCCGGCGTGCGT 367 consensus_15508#3 CGCGC-CGCC--GCCGGCGTCGAGCTCCATCGATTCCTCCGGCGACCGCC--GCGTGCGT 195 consensus_15508#2 G-AGAGGAGTGTTCGTCCCTTCAAACGAATAAAATCAGGGGCGCCTCCAGCCGGGCGGCC 299 consensus_15508#4 ------------------------------------------------------------ consensus_15508#0 GCAGGCGACCGACCCAGCGAGCGAACGAATAAAATCAGGGGCGCCTCCAGCCGGGCGGCC 594 consensus_15508#1 GCAGGCGACCGACCCAGCGAGCGAACGAATAAAATCAGGGGCGCCTCCAGCCGGGCGGCC 427 consensus_15508#3 -CAGGCGACCGACCCAGCGAGCGAACGAATAA--TCAGGGGC-CCTCCACC--GGCG--C 247 consensus_15508#2 TCTGAGCGTTACTATCTACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTG 359 consensus_15508#4 ------------------------------------------------------------ consensus_15508#0 TCTGAGCGTTACTATCTACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTG 654 consensus_15508#1 TCTGAGCGTTACTATCTACTACTATTAGCTGTAGTTTTGCTATTTTCAGCGTGAAGACTG 487 consensus_15508#3 CTTGAGCGTTACTATTA--TACTATTA-CTGTA--TTTTCTATTTTCAGC-TGAAG-CTG 300 consensus_15508#2 CGTGATAATTAAATAAGTGAGACCCGGCAGAAACCATGCGTTTGTGTGTGGTGTGTGGCA 419 consensus_15508#4 ---------------------------------------------GTGTGGTGTGTGGCA 15 consensus_15508#0 CGTGATAATTAAATAAGTGAGACCCGGCAGAAACCATGCGTTTGTGTGTGGTGTGTGGCA 714 consensus_15508#1 CGTGATAATTAAATAAGTGAGACCCGGCAGAAACCATGCGTTTGTGTGTGGTGTGTGGCA 547 consensus_15508#3 CGTGATAATTAAATAAGTGAGACCCG-CAGAAACCATGC-TTTGTGT----TGTTTG-CA 353 ** *** ** ** consensus_15508#2 TGGTGGACA-CTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGATC 478 consensus_15508#4 TGGTGGACAACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGATC 75 consensus_15508#0 TGGTGGACAACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGATC 774 consensus_15508#1 TGGTGGACAACTCATATGCCGGTTGATTTACCTGTATGTACTCTGTGTGAATGTGTGATC 607 consensus_15508#3 TGGTG-ACAACTCATA---CCGTTGATTTACC-GTA-GTACTCTG-GTGAATGTGTGATC 406 ***** *** ****** * *********** *** ******** ************** consensus_15508#2 GATAGATATGCTCGCCTGCAGTGTGTTGTGGTTTTTAATAAAAAAAAAA----------- 527 consensus_15508#4 GATAGATATGCTCGCCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 135 consensus_15508#0 GATAGATATGCTCGCCTGCAGTGTGTTGTGGTTTTTAATAAAAAAAAAAAAAAAAAAAAA 834 consensus_15508#1 GATAGATATGCTCGCCTGCAGTGTGTTGTGGTTTTTAATAATTTGGTGTGTTCGCGTGTG 667 consensus_15508#3 GATAAATA-GCTCCCC--CAGTGTGTTGTGGTTTTAAAAAAAAA---------------- 447 **** *** **** ** ** ** ** consensus_15508#2 ---------------------------- consensus_15508#4 AAAAA----------------------- 140 consensus_15508#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAA 862 consensus_15508#1 TGAAAAAATTT----------------- 678 consensus_15508#3 ---------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||