cluster # 15521

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Oryza sativa
cluster # 15521 cluster # 15521 Sequences # 22 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15521#0 length = 1200 sequences # 15
consensus_15521#1 length = 537 sequences # 4

consensus_15521#2 length = 457 sequences # 1
consensus_15521#3 length = 328 sequences # 2

consensusID : consensus_15521#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1200
fasta sequence

                              [CGAATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAA--CCCCTCCTCCTCCGAAGAGAGAGAAGGGAATCTCTCCTCTTCTCTTCTCTTCTCGCGCCGCCGCCGTGTCCAGTGCCCAAGATGTGGGGCAGCGCCGACGGCGGCACGCCGGAGGT-CACCCTGGAGACATCCATGGGCGCCTTCACCATCGAGATGTACTACAAGCACGCGCCCAAGACCTGCAGGAACTTCCTCGAGCTCTCGCGCCGCGGCTACTACGACAACGTCATCTTCCATCGCATCATCAAGGATTTCATCGTGCAAGGTGGGGATCCTACTGGCACCGGAAGAGGCGGCGAATCCATCTACGGAGCAAAGTTCGAGGATGAGATTAGGCCAGAACTGAAGCACACCGG-CGCTGGAATTCTGTCGATGGCCAACGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGTCACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCGCC-TTGG-AAGTGTCCAGACAGACAAAAGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGACTGTGGTCAAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTGGTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTATGCAGTGGTGTATCGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTCTTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGAAATATATGAAGTCATTTTGAGCGCATGATGTAATTCAGCTGATATTCAGCATGTTACATGCTGTACCAACTCAGGGATTTTTTTTTTATGTTCAAAACATAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGGTTTGCCCTTCCCTAACAAAGGGGAAATTTGTTAAAACCCGGGGGAATAACCCCTTTAAGGGGGGGTAAATTTGGCCTGGGGGGAAAAAGGGGAAAAACCGGTCCCCGGGGAAAAAGGGTTTCCCCCCCAAATTCCCCCAAAAAAAAAACCCGGAAACAAA]

[+] EMBL CF281308             [CGAATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAACTCCCCTCCTCCTCCGAAGAGAGAGAAGGGAATCTCTCCTCTCCTCTTCTCTTCTCGCGCCGCCGCCGTGTCCAGTGCCCAAGATGTGGGGCAGCGCCGACGGCGGCACGCCGGAGGT CACCCTGGAGACATCCATGGGCGCCTTCACCATCGAGATGTACTACAAGCACGCGCCCAAGACCTGCAGGAACTTCCTCGAGCTCTCGCGCCGCGGCTACTACGACAACGTCATCTTCCATCGCATCATCAAGGATTTCATCGTGCAAGGTGGGGATCCTACTGGCACCGGAAGAGGCGGCGAATCCATCTACGGAGCAAAGTTCGAGGATGAGATTAGGCCAGAACTGAAGCACACCGG CGCTGGAATTCTGTCGATGGCCAACGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGTCACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCGCC TTGG AAGTGTCCAGACAGACAAAAGTGATAGGCCCCTCCATGAAGTGAAAATCCTGCGGACTGTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF277746             [                     TGGACTGAAGGAGTAGAAA  CCCTTTCTCCTCCGAAGAGAGAGAAGGGAATCTCTCCTCTTCTCTTCTCTTCTCGCGCCGCCGCCGTGTCCAGTGCCCAAGATGTGGGGCAGCGCCGACGGCGGCACGCCGGAGGT CACCCTGGAGACATCCATGGGCGCCTTCACCATCGAGATGTACTACAAGCACGCGCCCAAGACCTGCAGGAACTTCCTCGAGCTCTCGCGCCGCGGCTACTACGACAACGTCATCTTCCATCGCATCATCAAGGATTTCATCGTGCAAGGTGGGGATCCTACTGGCACCGGAAGAGGCGGCGAATCCATCTACGGAGCAAAGTTCGAGGATGAGATTAGGCCAGAACTGAAGCACACCGG CGCTGGAATTCTGTCGATGGCCAACGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGTCACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCGCC TTGGNAAGTGTCCAGACAGACAAAAGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGACTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF281364             [                                                    TCCGAAGAGAGAGAAGGGAATCTCTCCTCTTCTCTTCTCTTCTCGCGCCGCCGCCGTGTCCAGTGCCCAAGATGTGGGGCAGCGCCGACGGCGGCACGCCGGAGGT CACCCTGGAGACATCCATGGGCGCCTTCACCATCGAGATGTACTACAAGCACGCGCCCAAGACCTGCAGGAACTTCCTCGAGCTCTCGCGCCGCGGCTACTACGACAACGTCATCTTCCATCGCATCATCAAGGATTTCATCGTGCAAGGTGGGGATCCTACTGGCACCGGAAGAGGCGGCGAATCCATCTACGGAGCAAAGTTCGAGGATGAGATTAGGCCAGAACTGAAGCACACCGG CGCTGGAATTCTGTCGATGGCCAACGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGTCACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCGCCTTTGG AAGTGTCCAGACAGACAAAAGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGACTGTGGTCAAAGATTGAGGCACAGCGGGTCTACTCGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF279477             [                                                     CCGAAGAGAGAGAAGGGAATCTCTCCTCTTCTCTTCTCTTCTCGCGCCGCCGCCGTGTCCAGTGCCCAAGATGTGGGGCAGCGCCGACGGCGGCACGCCGGATGT CACCCTGGAGACATCCATGGGCGCCTTCACCATCGAGATGTACTATTTTTTCGCGCCCAAGACCTGCATGAACTTCCTCGAGCTCTCGCGTCGCTGCTACTACGACAACGTCATCTTCCATCGCATCATCAAGGATTTCATCGTGCAAGGTGGGGATCCTACTGGCACCGGAAGAGGCGGCGAATCCATCTACGGAGCAAAGTTCGAGGATGAGATTAGGCCAGAACTGAAGCACACCGG CGCTGGAATTCTGTCGATGGCCAACGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGTCACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCGCC TTGG GAGTGTCCAGACAGACAAAAGTGATAGGCCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AB067654             [                                                        AAGAGAGAGAAGGGAATCTCTCCTCTTCTCTTCTCTTCTCGCGCCGCCGCCGTGTCCAGTGCCCAAGATGTGGGGCAGCGCCGACGGCGGCACGCCGGAGGT CACCCTGGAGACATCCATGGGCGCCTTCACCATCGAGATGTACTACAAGCACGCGCCCAAGACCTGCAGGAACTTCCTCGAGCTCTCGCGCCGCGGCTACTACGACAACGTCATCTTCCATCGCATCATCAAGGATTTCATCGTGCAAGGTGGGGATCCTACTGGCACCGGAAGAGGCGGCGAATCCATCTACGGAGCAAAGTTCGAGGATGAGATTAGGCCAGAACTGAAGCACACCGG CGCTGGAATTCTGTCGATGGCCAACGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGTCACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCGCC TTGG AAGTGTCCAGACAGACAAAAGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGACTGTGGTCAAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTGGTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTATGCAGTGGTGTATCGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTCTTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGAAATATATGAAGTCATTTTGAGCGCATGATGTAATTCAGCTGATATTCAGCATGTTACATGCTGTACCAACTCA                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK072675             [                                                                        TCTCTCCTCTTCTCTTCTCTTCTCGCGCCGCCGCCGTGTCCAGTGCCCAAGATGTGGGGCAGCGCCGACGGCGGCACGCCGGAGGT CACCCTGGAGACATCCATGGGCGCCTTCACCATCGAGATGTACTACAAGCACGCGCCCAAGACCTGCAGGAACTTCCTCGAGCTCTCGCGCCGCGGCTACTACGACAACGTCATCTTCCATCGCATCATCAAGGATTTCATCGTGCAAGGTGGGGATCCTACTGGCACCGGAAGAGGCGGCGAATCCATCTACGGAGCAAAGTTCGAGGATGAGATTAGGCCAGAACTGAAGCACACCGG CGCTGGAATTCTGTCGATGGCCAACGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGTCACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCGCC TTGG AAGTGTCCAGACAGACAAAAGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGACTGTGGTCGAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTGGTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTATGCAGTGGTGTATCGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTCTTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGAAATATATGAAGTCA                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C73703               [                                                                        TCTCTCCTCTTCTCTTCNCTTCTCGCGCCGCCGCCGTGTCCAGTGCCCAAGATGTGGGGCAGCGCCGACGGGGCCACG NGTAGGTNCACCCTGGAGACATCCATGGGCGCCTTCACCATCGAGATGTACTACAAGCACGCGCCCAAGACCTGCAGGAACTTCCTCGAGCTCTCGCGCCGCGGCTACTACGACAACGTCATCTTCCATCGCATCATCAAGGATTTCATCGTGCAAGGTGGGGATCCTACTGGCACCGGAAGAGGCGGCGAATCCATCTACGGAGCAAAGTTCGAGGATGAGATTAGGCCAGAACTGAAGCACACCGG CGCTGGAATTCTGTCGATGGCCAACGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGTCACTTGATGGAAAGCATACAATTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA755369             [                                                                           CTCCTCTTCTCTTCTCTTCTCGCGCCGCCGCCGTGTCCAGTGCCCAAGATGTGGGGCAGCGCCGACGGCGGCACGCCGGAGGT CACCCTGGAGACATCCATGGGCGCCTTCACCATCGAGATGTACTACAAGCACGCGCCCAAGACCTGCAGGAACTTCCTCGAGCTCTCGCGCCGCGGCTACTACGACAACGTCATCTTCCATCGCATCATCAAGGATTTCATCGTGCAAGGTGGGGATCCTACTGGCACCGGAAGAGGCGGCGAATCCATCTACGGAGCAAAGTTCGAGGATGAGATTAGGCCAGAACTGAAGCACACCGG CTCTGGGATTCTGTCGATGGCCAACGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGTCACTTGATGGAAAGCATACTATTTTTGGGAGAGTATCATAAGGAATGGAAATTGTCAAGCGCC TTGG AAGTGTCCAGACAGACGAAAGTGATAGGCCCATCCGTGAAGTGATAATCCTGCGGACTGTGGTACAAGATTGAGGCACAGCGGGTCTACTCGGGGTCACTCATGACTTCTGGCATTTGGAGTTGTAGCTGCTGTCAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB665527             [                                                                            TCCTCTCCTCTTCTCTTCTCGCGCCGCCGCCGTGTCCAGTGCCCAAGATGTGGGGCAGCGCCGACGGCGGCACGCCGGAGGT CACCCTGGAGACATCCATGGGCGCCTTCACCATCGAGATGTACTACAAGCACGCGCCCAAGACCTGCAGGAACTTCCTCGAGCTCTCGCGCCGCGGCTACTACGACAACGTCATCTTCCATCGCATCATCAAGGATTTCATCGTGCAAGGTGGGGATCCTACTGGCACCGGAAGAGGCGGCGAATCCATCTACGGAGCAAAGTTCGAGGATGAGATTAGGCCAGAACTGAAGCACACCGG CGCTGGAATTCTGTCGATGGCCAACGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGTCACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCGCC TTGG AAGTGTCCAGACAGACAAAAGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGACTGTGGTCAAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTGGTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTATGCAGTGGTGTATCGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTCTTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTG                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB665528             [                                                                                                                                                                                                                      CCCAAGACCTGCAGGAACTTCCTCGAGCTCTCGCGCCGCGGGTAATACGACAACGTCATCTTCCATCGCATCATCAAGGATTTCATCGTGCAAGGTGGGGATCCTACTGGCACCGGAAGAGGCGGCGAATCCATCTTCGGAGCAAAGTTCGAGGATGAGATTAGGCCAGAACTGAAGCACACCGG CGCTGGAATTCTGTCGATGGCCAACGTTGGTCCAAATACAAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGTCACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCGCC TTGG AAGTGTCCAGACAGACAAAAGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGACTGTGGTCAAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTTTGGTATTTGGAGTAGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTATGCAGTGGTGTATCCTTTCGGATGGGCTAGTTTAGTTATTACCAACTCAGGGATCGTGATCCGTCTTAATTATTCTCCCCCGAACGAGTAGTGTTCAGTGATTATCAGTGG                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CF277745             [                                                                                                                                                                                                                                                                                              ATCAAGGATTTCATCGTGCAAGGTGGGGATCCTACTGGCACCGGAAGAGGCGGCGAATCCATCTACGGAGCAAAGTTCGAGGATGAGATTAGGCCAGAACTGAAGCACACCGGNCGCTGGAATTCTGTCGATGGCCAACGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGTCACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCGCC TTGG AAGTGTCCAGACAGACAAAAGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGACTGTGGTCAAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTGGTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTATGCAGTGGTGTATCGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTCTTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGAAATATATGAAGTCATTTTGAGCGCAaaaaa                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CF281309             [                                                                                                                                                                                                                                                                                                                                                                        GTTCGAGGATGAGATTAGGCCAGAACTGAAGCACACCGG CGCTGGAATTCTGTCGATGGCCAACGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGTCACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCGCC TTGG AAGTGTCCAGACAGACAAAAGTGATAGGCCCCTCCATGAAGTGAAAATCCTGCGGACTGTGGTCAAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTGGTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTATGCAAAAAAGAATCGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTCTTAATTATTCTCACCTGAACGAGTAGTGTTCTGTGATTATCAGTGGAAATAACTTTCGAAATATATGAAGTCATTTTGAGCGCATGATGTAAaaaa                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CF281365             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGTCACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCGCC TTGG AAGTGTCCAGACAGACAAAAGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGACTGTGGTCAAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTGGTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTATGCAGTGGTGTATCGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTCTTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGAAATATATGAAGTCATTTTGAGCGCATGATGTAATTCAGCTGATATTCAGCATGTTACATGCTGTACCAAaaa                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF197391             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACTCTTGCGCCTTGTCAGTCACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCGCC TTGG AAGTGTCCAGACAGACAAAAGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGACTGTGGTCAAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTGGTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTATGCAGTGGTGTATCGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTCTTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGNNNTATATGAAGTCATTTTGAGCGCATGAAGTAnnnaaaan                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF337277             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         catggacaGAAGGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGAAATATATGAAGTCATTTTGAGCGCATGATGTAATTCAGCTGATATTCAGCATGTTACATGCTGTACCAACTCAGGGATTTTTTTTTTATGTTCAAAACATAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGGTTTGCCCTTCCCTAACAAAGGGGAAATTTGTTAAAACCCGGGGGAATAACCCCTTTAAGGGGGGGTAAATTTGGCCTGGGGGGAAAAAGGGGAAAAACCGGTCCCCGGGGAAAAAGGGTTTCCCCCCCAAATTCCCCCAAAAAAAAAACCCGGAAACAAA]




>consensus_15521#0
CGAATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAACCCCTCCTCCTCCGAAGAGA
GAGAAGGGAATCTCTCCTCTTCTCTTCTCTTCTCGCGCCGCCGCCGTGTCCAGTGCCCAA
GATGTGGGGCAGCGCCGACGGCGGCACGCCGGAGGTCACCCTGGAGACATCCATGGGCGC
CTTCACCATCGAGATGTACTACAAGCACGCGCCCAAGACCTGCAGGAACTTCCTCGAGCT
CTCGCGCCGCGGCTACTACGACAACGTCATCTTCCATCGCATCATCAAGGATTTCATCGT
GCAAGGTGGGGATCCTACTGGCACCGGAAGAGGCGGCGAATCCATCTACGGAGCAAAGTT
CGAGGATGAGATTAGGCCAGAACTGAAGCACACCGGCGCTGGAATTCTGTCGATGGCCAA
CGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGTCACT
TGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCGCCT
TGGAAGTGTCCAGACAGACAAAAGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGAC
TGTGGTCAAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTGGTATTT
GGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTATGCAGT
GGTGTATCGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTCT
TAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGAAA
TATATGAAGTCATTTTGAGCGCATGATGTAATTCAGCTGATATTCAGCATGTTACATGCT
GTACCAACTCAGGGATTTTTTTTTTATGTTCAAAACATAAAAAAAAAAAAAAACAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAACCCCTGGTTTGCCCTTCCCTAACAAAGGGGAAATTTGTTAAAACCCG
GGGGAATAACCCCTTTAAGGGGGGGTAAATTTGGCCTGGGGGGAAAAAGGGGAAAAACCG
GTCCCCGGGGAAAAAGGGTTTCCCCCCCAAATTCCCCCAAAAAAAAAACCCGGAAACAAA

consensusID : consensus_15521#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 537
fasta sequence

                              [GGATTGAGATTTAGCCCAGAACTGAAGCACCACCCGGCGCTGGAATTCTGTCGATGGCCAACGCTGGTCCAAATACAAATGGAAGCCAGTTCT-TTATTACTC-TTGCGCCTTGTCAGTCACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCG-CCTTGGAAGTGTCCAGACAGACAAAAGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGACTGTGGTCA-AAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTGGTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTATGCAGTGGTGTATCGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTCTTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGA-AATATATGAAGTCATTTTGAGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL BM419760             [GGATTGAGATTTAGCCCAGAACTGAAGCACCACCCGGCGCTGGAATTCTGTCGATGGCCAACGCTGGTCCAAATACAAATGGAAGCCAGTTCT TTATTACTC TTGCGCCTTGTCAGTCACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCGCCCTTGGAAGTGTCCAGACAGACAAAAGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGACTGTGGTCA AAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTGGTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTATGCAGTGGTGTATCGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTCTTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGA AATATATGAAGTCATTTTGAGCGCCAAAAAAAAAA                       ]
[-] EMBL CF279476             [                                                TGTCGATGGCCAACGCTGGTCCAAATACAAATGGAAGCCAGTTCT TTATTACTC TTGCGCCTTGTCAGTCACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCG CCTTGGAAGTGTCCAGACAGACAAAAGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGACTGTGGTCA AAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTGGTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTATGCAGTGGTGTATCGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTCTTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGANAATATATGAAGTCATTTTGAGCGCAAAAAAAAA                         ]
[+] EMBL BI805100             [                                                                                      CAGTTCTGTTATTACTCTTTGCGCCTTGTCAGTCACTTGATGGAAAGCATACCATTTTTGGGAGAGTATCCAAAGGAATGGAAATTGTCAAGCG CCTTGGAAGTGTCCAGACAGACCAAAGTGATAGGCCCATCCCTGAAGTGAAAATCCTGCGGACTGTGGTCACAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGGCTTCTGGTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTATCCAGTGGTGTATCGTTTCGGATGGGCTAGTTTAGTTATTAACCACTCATGAATCGTGATCCGTCTTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGA AATATATGAAGTCATTTTGAGCGCAAAAAAAAAA                        ]
[+] EMBL CF315062             [                                                                                                                                                                                                                  ATAGGCCCATCCATGAAGTGAAAATCCTGCGGACTGTGGTCA AAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTGGTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTATGCAGTGGTGTATCGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTCTTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGA AATATATGAAGTCATTTTGAGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_15521#1
GGATTGAGATTTAGCCCAGAACTGAAGCACCACCCGGCGCTGGAATTCTGTCGATGGCCA
ACGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGTCAC
TTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGCGCC
TTGGAAGTGTCCAGACAGACAAAAGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGA
CTGTGGTCAAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTGGTATT
TGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTATGCAG
TGGTGTATCGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTC
TTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGAA
ATATATGAAGTCATTTTGAGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_15521#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 457
fasta sequence

                              [CTTTGTTACAAACGCGCCCTTTGGGAAACGNTGTTCCCACTGAGCAGGACCCCCAACACGTGATTATCGTGCCCCACNTCCCACATGANACAGTGAATAATTTCCTGTCTGGAGCTGTTGGTTCACATACGACGTTGANGGCACTCACGCCGGGTNTATACTCGGTGTGCAGCTCACTCGACTTTTCTGGGTATTTTGGGATTTTTGTATGTCTGGCTGTGCACGTGTTTCACGGAATTTTGTGTTCCTCGCTGTCGTGTCCGTGCGTGACTCGCCACGTCGGTGGTATTCGTTTCCGCGATCGGCTATGTTTTAGGTATTGAGACCACACACTGCACTGGAATTCGTNGACTGCCGTGCTTAAATGTATTTGGCTCACCTGACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGAAATATATGAAGTCATTTTGAGCGCAAAAAAAAAA]

[+] EMBL BM418667             [CTTTGTTACAAACGCGCCCTTTGGGAAACGNTGTTCCCACTGAGCAGGACCCCCAACACGTGATTATCGTGCCCCACNTCCCACATGANACAGTGAATAATTTCCTGTCTGGAGCTGTTGGTTCACATACGACGTTGANGGCACTCACGCCGGGTNTATACTCGGTGTGCAGCTCACTCGACTTTTCTGGGTATTTTGGGATTTTTGTATGTCTGGCTGTGCACGTGTTTCACGGAATTTTGTGTTCCTCGCTGTCGTGTCCGTGCGTGACTCGCCACGTCGGTGGTATTCGTTTCCGCGATCGGCTATGTTTTAGGTATTGAGACCACACACTGCACTGGAATTCGTNGACTGCCGTGCTTAAATGTATTTGGCTCACCTGACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGAAATATATGAAGTCATTTTGAGCGCAAAAAAAAAA]




>consensus_15521#2
CTTTGTTACAAACGCGCCCTTTGGGAAACGNTGTTCCCACTGAGCAGGACCCCCAACACG
TGATTATCGTGCCCCACNTCCCACATGANACAGTGAATAATTTCCTGTCTGGAGCTGTTG
GTTCACATACGACGTTGANGGCACTCACGCCGGGTNTATACTCGGTGTGCAGCTCACTCG
ACTTTTCTGGGTATTTTGGGATTTTTGTATGTCTGGCTGTGCACGTGTTTCACGGAATTT
TGTGTTCCTCGCTGTCGTGTCCGTGCGTGACTCGCCACGTCGGTGGTATTCGTTTCCGCG
ATCGGCTATGTTTTAGGTATTGAGACCACACACTGCACTGGAATTCGTNGACTGCCGTGC
TTAAATGTATTTGGCTCACCTGACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTT
CGAAATATATGAAGTCATTTTGAGCGCAAAAAAAAAA

consensusID : consensus_15521#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 328
fasta sequence

                              [TCCGCCCACGCGTCCGGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGACTGTGGTCAAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTGGTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGC-TTATGCAGT-GGTGTATCGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTCTTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGAAATATATGAAGTCATTTTGAGCGCAAAAAAAAAAAAA]

[+] EMBL AU176470             [TCCGCCCACGCGTCCGGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGACTGTGGTCAAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTGGTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGC TTATGCAGT GGTGTATCGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTCTTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGAAATATATGAAGTCATTTTGAGCGCAAAAAAAAAAAAA]
[+] EMBL BE229359             [                                                                                                                                                          cgagCCGTGCTTTATGCAGTBSSBGTATCGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTCTTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGAAATATATGAAGTCATTTTGAGCGCAAAAAAAAAAAA ]




>consensus_15521#3
TCCGCCCACGCGTCCGGTGATAGGCCCATCCATGAAGTGAAAATCCTGCGGACTGTGGTC
AAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTGGTATTTGGAGTTG
TAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTATGCAGTGGTGTAT
CGTTTCGGATGGGCTAGTTTAGTTATTAACAACTCATGAATCGTGATCCGTCTTAATTAT
TCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATAACTTTCGAAATATATGA
AGTCATTTTGAGCGCAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15521#0      CGAATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAACCCCTCCTCCTCCGAAGAGA 60
consensus_15521#1      ------------------------------------------------------------
consensus_15521#3      ------------------------------------------------------------
consensus_15521#2      ------------------------------------------------------------
                                                                                   

consensus_15521#0      GAGAAGGGAATCTCTCCTCTTCTCTTCTCTTCTCGCGCCGCCGCCGTGTCCAGTGCCCAA 120
consensus_15521#1      ------------------------------------------------------------
consensus_15521#3      ------------------------------------------------------------
consensus_15521#2      ------------------------------------------------------------
                                                                                   

consensus_15521#0      GATGTGGGGCAGCGCCGACGGCGGCACGCCGGAGGTCACCCTGGAGACATCCATGGGCGC 180
consensus_15521#1      ------------------------------------------------------------
consensus_15521#3      ------------------------------------------------------------
consensus_15521#2      ------------------------------------------------------------
                                                                                   

consensus_15521#0      CTTCACCATCGAGATGTACTACAAGCACGCGCCCAAGACCTGCAGGAACTTCCTCGAGCT 240
consensus_15521#1      ------------------------------------------------------------
consensus_15521#3      ------------------------------------------------------------
consensus_15521#2      ------------------------------------------------------------
                                                                                   

consensus_15521#0      CTCGCGCCGCGGCTACTACGACAACGTCATCTTCCATCGCATCATCAAGGATTTCATCGT 300
consensus_15521#1      ------------------------------------------------------------
consensus_15521#3      ------------------------------------------------------------
consensus_15521#2      ------------------------------------------------------------
                                                                                   

consensus_15521#0      GCAAGGTGGGGATCCTACTGGCACCGGAAGAGGCGGCGAATCCATCTACGGAGCAAAGTT 360
consensus_15521#1      ------------------------------------------------------------
consensus_15521#3      ------------------------------------------------------------
consensus_15521#2      ------------------------------------------------------------
                                                                                   

consensus_15521#0      CGAGGATGAGATT-AGGCCAGAACTGAAGCACA--CCGGCGCTGGAATTCTGTCGAT-GG 416
consensus_15521#1      --GGATTGAGATTTAGCCCAGAACTGAAGCACCACCCGGCGCTGGAATTCTGTCGAT-GG 57
consensus_15521#3      ------------------------------------------------------------
consensus_15521#2      ------------------------------------CTTTGTTACAAACGCGCCCTTTGG 24
                                                                                   

consensus_15521#0      CCAACGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGT 476
consensus_15521#1      CCAACGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATTACTCTTGCGCCTTGTCAGT 117
consensus_15521#3      ------------------------------------------------------------
consensus_15521#2      GAAACGNTGTTCCCACTGAGCAGGACCCCCAACACGTGATTA---TCGTGCCCCACNTCC 81
                                                                                   

consensus_15521#0      CACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGC 536
consensus_15521#1      CACTTGATGGAAAGCATACAATTTTTGGGAGAGTATCAAAAGGAATGGAAATTGTCAAGC 177
consensus_15521#3      ------------------------------------------------------------
consensus_15521#2      CACATGA--NACAGTGAATAATTTCC-------TGTCTGGAG--CTGTTGGTTCACATAC 130
                                                                                   

consensus_15521#0      GCC-TTGGAAGTGTCCAGACAGACAAA-AGTGATAGGCCCATCCATGAAGTGAAAATCCT 594
consensus_15521#1      GCC-TTGGAAGTGTCCAGACAGACAAA-AGTGATAGGCCCATCCATGAAGTGAAAATCCT 235
consensus_15521#3      -------------TCCGCCCACGCGTCCGGTGATAGGCCCATCCATGAAGTGAAAATCCT 47
consensus_15521#2      GACGTTGANGGCACTCACGCCGGGTNT--ATACTCGGTGTGCAGCTCACTCGACTTTTCT 188
                                      *   *          *  * **        * *   **   * **

consensus_15521#0      GCGGACTGTGGTCAAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTG 654
consensus_15521#1      GCGGACTGTGGTCAAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTG 295
consensus_15521#3      GCGGACTGTGGTCAAAGATTGAGGCACAGCGGGTCTACTCGGTGTCACTCATGACTTCTG 107
consensus_15521#2      GGGTATTTTGG-----GATTTTTGTATGTCTGGCTGTGCACGTGT--TTCACGGAATTTT 241
                       * * * * ***     ****   * *   * **        ****   *** *   * * 

consensus_15521#0      GTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTA 714
consensus_15521#1      GTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTA 355
consensus_15521#3      GTATTTGGAGTTGTAGCTGCTGTCAGTTTCAGGAATTGTTTCCTGCTTGTTCCGTGCTTA 167
consensus_15521#2      GTGTTCCTCGCTGTCGTGTCCGTGCGT-----GACTCGCCACGTCGGTGGTATTCGTTTC 296
                       ** **    * *** *   * **  **     ** * *   * *   ** *    * ** 

consensus_15521#0      TGCAGTGGTGTATCGTTTCGGA--TGGGCTAGTTTAGTTATTAACAACTCATGAATCGTG 772
consensus_15521#1      TGCAGTGGTGTATCGTTTCGGA--TGGGCTAGTTTAGTTATTAACAACTCATGAATCGTG 413
consensus_15521#3      TGCAGTGGTGTATCGTTTCGGA--TGGGCTAGTTTAGTTATTAACAACTCATGAATCGTG 225
consensus_15521#2      CGCGATCGGCTATGTTTTAGGTATTGAGACCACACACTGCACTGGAATTCGTNGACTGCC 356
                        **  * *  ***  *** **   ** *       * *       ** ** *  *  *  

consensus_15521#0      ATCCGTC--TTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATA 830
consensus_15521#1      ATCCGTC--TTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATA 471
consensus_15521#3      ATCCGTC--TTAATTATTCTCACCTGAACGAGTAGTGTTCAGTGATTATCAGTGGAAATA 283
consensus_15521#2      GTGCTTAAATGTATTTGGCTCACCTGA-CGAGTAGTGTTCAGTGATTATCAGTGGAAATA 415
                        * * *   *  ***   ********* ********************************

consensus_15521#0      ACTTTCGAAATATATGAAGTCATTTTGAGCGCATGATGTAATTCAGCTGATATTCAGCAT 890
consensus_15521#1      ACTTTCGAAATATATGAAGTCATTTTGAGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 531
consensus_15521#3      ACTTTCGAAATATATGAAGTCATTTTGAGCGCAAAAAAAAAAAAA--------------- 328
consensus_15521#2      ACTTTCGAAATATATGAAGTCATTTTGAGCGCAAAAAAAAAA------------------ 457
                       *********************************  *   **                   

consensus_15521#0      GTTACATGCTGTACCAACTCAGGGATTTTTTTTTTATGTTCAAAACATAAAAAAAAAAAA 950
consensus_15521#1      AAAAAA------------------------------------------------------ 537
consensus_15521#3      ------------------------------------------------------------
consensus_15521#2      ------------------------------------------------------------
                                                                                   

consensus_15521#0      AAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1010
consensus_15521#1      ------------------------------------------------------------
consensus_15521#3      ------------------------------------------------------------
consensus_15521#2      ------------------------------------------------------------
                                                                                   

consensus_15521#0      AAAAAAAAAAAAAAAAAAAAAAACCCCTGGTTTGCCCTTCCCTAACAAAGGGGAAATTTG 1070
consensus_15521#1      ------------------------------------------------------------
consensus_15521#3      ------------------------------------------------------------
consensus_15521#2      ------------------------------------------------------------
                                                                                   

consensus_15521#0      TTAAAACCCGGGGGAATAACCCCTTTAAGGGGGGGTAAATTTGGCCTGGGGGGAAAAAGG 1130
consensus_15521#1      ------------------------------------------------------------
consensus_15521#3      ------------------------------------------------------------
consensus_15521#2      ------------------------------------------------------------
                                                                                   

consensus_15521#0      GGAAAAACCGGTCCCCGGGGAAAAAGGGTTTCCCCCCCAAATTCCCCCAAAAAAAAAACC 1190
consensus_15521#1      ------------------------------------------------------------
consensus_15521#3      ------------------------------------------------------------
consensus_15521#2      ------------------------------------------------------------
                                                                                   

consensus_15521#0      CGGAAACAAA 1200
consensus_15521#1      ----------
consensus_15521#3      ----------
consensus_15521#2      ----------