These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15523#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1723 fasta sequence [AAGACGTCGCTAATTGAGAGGACCGTCC-GCG-TCGCTCCCCGCGTG-AN-AACC-GGGC-GGGCGTCAACCCTA-GCGCCGCCGCCGCTTTCCCTCTCCCTCCCCCANCCCGCCGCTGCCGG-AGCGGCCGGGCCTCGGCTCAGTGTGCAAGGACGGCGGCGGCGGGGCAGTTTGCCGTGGAAC-GCG-G-GCCCGGTCCTGCGCGGGGAGGTCGGTCGGCGTTCGGTGGTGGCTGCGGCGACCCGACGGCGAGTCACTCT-AGCGACGGCGGCGGGGTGGGACGACGAAGAGCAGCAGCTCCTTGGAGACGGCGGGAGGAAGTTGAAGGCCGGAGACGGA-GGGGACGGCCAGATCCGGCCGTCTCCTTTCTGGATCTGGAGGTCGTCGGGGTGGGGGTGATGGCGGCGGGGTGGTGAAGGTGAGACCGGCGCCAGTGCTCGGAAGAAGGCCAGAGGGGAAGGGGC-GGCCAGCGGTCTGCGATGGTGATGGCCGGTGGAGGC-GGTGC-GCCGGTGCTAGCCGGCGT-AGGTGGAGCCCAGTTTGGGCAAGATGCATGTGGCCGGCGGAGGTAAGCAAGTTGGTGACCGGCGGAGGTGGTTGTTGCCGGCGAAGAGGGTGTCGAGGTGGCCGGAGAAGTTGCTGGCCTGCAGGGAGGTTGTGCTTGGGTTGGTCGGGCGGTCGCTACTATGGCTCGTTCGTTTGG-AAAGCCGTAGGGCACGGTGAACAATAGTGTTGTCGGTGGCTTGTTCG-CCGGCATGT-CCCATGATC-AGTTGGGGC-TCCTCCCGTTCCTGGAGCTCCT-CCCCTCCTGTTGACCGGTCTGCTCTC-AGATTCCGGTTGTGGGGAGTTCCTTGGCGAGGGGCGGGTTGCTAGCTGGGTTGGCAGATTTGCTTGGAGTTCGAGAGCCTCAGCACTGCATGTGCCTAGCTTCTCTTGCGTCTGCGAGGTGTTTGGTTTGGTGGAGTTGGTGCATGAAATCCCTACGACGCAACCTGTCGATGGTGTTTGGGGTGGAGTCGGAGCTGCTTGG-CCGGGTGTGGCAAGCTGGGC-AACGATAACCCCCTTGCCCCTTC-TTTTTGGTAGCTTCGTTGGGGT-GGCTGTGCTGTT-GGCTT-CCTGGCGTGTCTTTGGGTAGGTGTGTTGGGGGGAGTCGG-AGCTGCTTGTAGGTGACAAGCTC-GGCAACGATAACCCTCTCCCGCTTT-CCTTGGTAGCGTTGTGGAAGCCAGGGGTGTCGTAGTTGGCAGGGAGAGCGAGCCGGGGCGTTTTGTCCTGCTCGTTCTTAGGATAGAGGCAACGATGGCGACGCCTGTGGGCGCCGTTTTCCTTGTTGAAGGCATCGTTCTTTGCTCTACCCGTTTTCTTCGGGTGAAAACCCTGTTCCGATTTTCGGACGGACGTTGCTTGCGTTTCGACGCTCTGTTTCCTCCTTGGAGGCTTCGTCTTGAAGACCCTGCTCTACGTTGTCTGTGGTCTGTTCATAGGAAGTCGGAGTTTTTGGCTTTGATGAGCTATGTTCTCCTCCAGTTGTGCCGTCGCAAGTTTTTTCTTTGTTCTCCTTGTGGGTTTTGCCCGGTTTCCCCTTTAAACCGTGCTTATGTAAGGTTTTTGGGCCCGGTTTCCCCTCAAAACCTGGGTCAAGTCTCTTCTTCTTTAATGAAAACAGGCTCTCCCTGACCTCTTCTGAGGTTTTTCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA--AAAAAAAA] [+] EMBL AU096403 [AAGACGTCGCTAATTGAGAGGACCGTCCGGCGTTCGCTCCCCGCGTGAANGAACC GGGCGGGGCGTCAACCCTANGCGCCGCCGCCG TTTCCCTCTCCCTCCCCCAGGCCGCCGCTGCCGGAAGCGGCCGGGCCTCGGCTCANTGTGCAAGGACGGCGGCGGCGGGGCA TTTGCCGTGGAAC GGG G GCCCGGTCCTGCGCGGGGAAGTCGGTCGGCGTTCGGTGGTGGCTGCGGNGACCCGACGGCGAATCA TCTAAGCGACGGC GNGGGGTGGGACGACGAAGAGC ] [+] EMBL C97415 [ ACGTCGCTAATTGAGAGGACCGTCC GCG TCGCTCCCCGCGTG AN AANC GGGC GGGCGTCAACCCTA GCGCCGCCGCCGCTTTCCCTCTCCCTCCCCCANCCCGCCGCTGCCGG AGCGGCCGGGCCTCGGCTCAGTGTGCAAGGACGGCGGCGGCGGGGCAGTTTGCCGTGGAAC GGN G GCCCGGTCCTGCGCGGGGAGGTCGGTCGGCGTTCGGTGGTGGCTGCGGCGACCCGACGGCGANTCACTCT AGCGACGGCGGCGGGGTGGGACGACGAAGAGCAGCAGCTCCTTGGAGANGGCGGGAGGAAGTTGAAGGCCGGAGACGGA GGGGACGGCCAGATCCGGCCGTCTCCTTTCT ] [+] EMBL C26803 [ CGCTAATTGAGAGGACCGTCC GCT TCGCTCCCCGCGTG AN AACCTGGGC GGGCGTCAACCCTA GCGCCGCCGCCGCTTTCCCTCTCCCTCCCCCANCCCGCCGCTGCCGG AGCGGCCGGGCCTCGGCTCANTNTGCAAGGACGGCGGCGGCGGGGCAGTTTGCCGTGGAAC GCG GNGCCCGGTCCTGCGCGGGGAGGTCGGTCGGCNTTCGGTGGTGGCTGCGGCGACCCGACGGCNAG ] [+] EMBL AU065439 [ CGCTAATTGAGAGGACCGTCC GCG TCGCTCCCCGCGTG AN ANCC NGGC GGGCGTCAACCCTA GCGCCGCCGCCGCTTTCCCTCTCCCTCCCCCATNCCGCCGCTGCCGG AGCGGCCGGGCCTCGGCTCAGTGTGCAAGGACGGCGGCGGCGGGGCAGTTTGCCGTGGAAC GCG G GCCCGGTCCTGCGCGGGGAGGTCGGTCGGCGTTCGGTGGTGGCTGCGGCGACCCGACGGCGAGTCACTCT AGCGACGGCGGCGGGGTGGGACGACGAAGAGCAGCAACTTCTTGGAGACGGCGGGAGGAAGTTGAAGGCCGGAGA ] [+] EMBL AU173309 [ CGG AGCGGCCGGGCCTCGGCTCAGTGTGCAAGGACGGCGGCGGCGGGGCAGTTTGCCGTGGAACGGCG G GCCCGGTCCTGCGCGGGGAGGTCGGTCGGCGTTCGGTGGTGGCTGCGGCGACCCGACGGCGAGTCACTCT AGCGACGGCGGCGGGGTGGGACGACGAAGAGCAGCAGCTCCTTGGAGACGGCGGGAGGAAGTTGAAGGCCGGANACGGANGGGGACGGCCAGATNCGGCCGTCTCCTTTCTGG ] [+] EMBL AK101219 [ CGG AGCGGCCGGGCCTCGGCTCAGTGTGCAAGGACGGCGGCGGCGGGGCAGTTTGCCGTGGAACGGCG G GCCCGGTCCTGCGCGGGGAGGTCGGTCGGCGTTCGGTGGTGGCTGCGGCGACCCGACGGCGAGTCACTCT AGCGACGGCGGCGGGGTGGGACGACGAAGAGCAGCAGCTCCTTGGAGACGGCGGGAGGAAGTTGAAGGCCGGAGACGGA GGGGACGGCCAGATCCGGCCGTCTCCTTTCTGGATCTGGAGGTCGTCGGGGTGGGGGTGATGGCGGCGGGGTGGTGAAGGTGAGACCGGCGCCAGTGCTCGGAAGAAGGCCAGAGGGGAAGGGGC GGCCAGCGGTCTGCGATGGTGATGGCCGGTGGAGGC GGTGC GCCGGTGCTAGCCGGCGT AGGTGGAGCCCAGTTTGGGCAAGATGCATGTGGCCGGCGGAGGTAAGCAAGTTGGTGACCGGCGGAGGTGGTTGTTGCCGGCGAAGAGGGTGTCGAGGTGGCCGGAGAAGTTGCTGGCCTGCAGGGAGGTTGTGCTTGGGTTGGTCGGGCGGTCGCTACTATGGCTCGTTCGTTTGG AAAGCCGTAGGGCACGGTGAACAATAGTGTTGTCGGTGGCTTGTTCG CCGGCATGT CCCATGATC AGTTGGGGC TCCTCCCGTTCCTGGAGCTCCT CCCCTCCTGTTGACCGGTCTGCTCTC AGATTCCGGTTGTGGGGAGTTCCTTGGCGAGGGGCGGGTTGCTAGCTGGGTTGGCAGATTTGCTTGGAGTTCGAGAGCCTCAGCACTGCATGTGCCTAGCTTCTCTTGCGTCTGCGAGGTGTTTGGTTTGGTGGAGTTGGTGCATGAAATCCCTACGACGCAACCTGTCGATGGTGTTTGGGGTGGAGTCGGAGCTGCTTGG CCGGGTGTGGCAAGCTGGGC AACGATAACCCCCTTGCCCCTTC TTTTTGGTAGCTTCGTTGGGGT GGCTGTGCTGTT GGCTT CCTGGCGTGTCTTTGGGTAGGTGTGTTGGGGGGAGTCGG AGCTGCTTGTAGGTGACAAGCTC GGCAACGATAACCCTCTCCCGCTTT CCTTGGTAGCGTTGTGGAAGCCAGGGGTGTCGTAGTTGGCAGGGAGAGCGAGCCGGGGCGTTTTGTCCTGCTCGTTCTTAGGATAGAGGCAACGATGGCGACGCCTGTGGGCGCCGTTTTCCTTGTTGAAGGCATCGTTCTTTGCTCTACCCGTTTTCTTCGGGTGAAAACCCTGTTCCGATTTTCGGACGGACGTTGCTTGCGTTTCGACGCTCTGTTTCCTCCTTGGAGGCTTCGTCTTGAAGACCCTGCTCTACGTTGTCTGTGGTCTGTTCATAGGAAGTCGGAGTTTTTGGCTTTGATGAGCTATGTTCTCCTCCAGTTGTGCCGTCGCAAGTTTTTTCTTTGTTCTCCTTGTGGGTTTTGCCCGGTTTCCCCTTTAAACCGTGCTTATGTAAGGTTTTTGGGCCCGGTTTCCCCTCAAAACCTGGGTCAAGTCTCTTCTTCTTTAATGAAAACAGGCTCTCCCTGACCTCTTCTGAG ] [+] EMBL OSS13171A [ CGG AGCGGCCGGGCCTCGGCTCAGTGTGCAAGGACGNCGGCGGCGGGGCAGTTTGCCGTGGAAC GCGTN GCCCGGTCCTGCGCGGGGAGGTCGGTCGGCGTTCGGTGGTGGCTGCGGCGACCCGACGNCGAGTCACTCT AGCGACGTCGGCGAGGTGGGACGACGAAGAGCAGCAGCTCCTTGGAGACGTCGNGAGGAAGTTGAAGGCCGNAGACGGA GGGGACGGCCAGATCCGGCCGTCTCCT ] [+] EMBL AU183207 [ GCGCCAGTGCTCGGAAGAAGGCCGGAGGGGAAGGGGCAGGCCAGCGGTCTGCGATGGTGATGGCCGGTGGAGGCAGGTGCAGCCGGTGCTAGCCGGCGT AGGTGGAGCCCAGTTTGGGCAAGATGCATGTGGCCGGCGGAGGTAAGCAAGTTGGTGACCGGCGGAGGTGGTTGTTGCCGGCGAAGAGGGTGTCGAGGTGGCCGGAGAAGTTGCTGGCCTGCAGGGAGGTTGTGCTTGGGTTGGTCGGGCGGTCGCTACTATGGCTCGTTCGTTTGG AAAGCCGTAGGGCACGGTGAACAATAGTGTTGTCGGTGGCTTGTTCG CCGGCATGT CCCATGATC AGTTGGGGC TCCTCCCGTTCCTGGAGCTCCT CCCCTCCTGTTGACCGGTCTGCTCTC AGATTCCGGTTGTGGGGAGTTCCTTGG ] [+] EMBL AU058377 [ GGGGC GGCCAGCGGTCTGCGATGGTGATGGCCGGTGGAGGC GGTGC GCCGATGCTAGCC GNGTAAGGTGGAGCCCAGTTTGGGCAAGATGCATGTGGCCGGCGGAGGTAAGCAAGTTGGTGACCGGCGGAGGTGGTTGTTGCCGGCGAAGAGGGTGTCGAGGTGGCCGGAGAAGTTGCTGGCCTGCAGGGAGGTTGTGCTTGGGTTGGTCGGGCGGTCGCTACTATGGCTCGTTCGTTTGGAAAAGCCGTA GGCACGGTGAACAATAGTGTTGTCGGTGGCTTGTTCG CCGGCATGT CCCATGATC AGTTTGGGC TCCTCCCGTTCCTGGAACTCCT CCCCTCCTGTTGACCGG ] [+] EMBL AU058376 [ TGGAGGC GGTGC GCCGATGCTAGCC GNGTAAGGTGGAGCCCAGTTTGGGCAAGATGCATGTGGCCGGCGGAGGTAAGCAAGTTGGTGACCGGCGGAGGTGGTTGTTGCCGGCGAAGAGGGTGTCGAGGTGGCCGGAGAAGTTGCTGGCCTGCAGGGAGGTTGTGCTTGGGTTGGTCGGGCGGTCGCTACTATGGCTCGTTCGTTTGG AAAGCCGTAGGGCACGGTGAACAATAGTGTTGTCGGTGGCTTGTTCG CCGGCATGT CCCATGATC AGTTGGGGC TCCTCCCGTTCCTGGAGCTCCT CCCCTCCTGTTGACCGGTCTGCTCTC AGATTCCG ] [-] EMBL AU058370 [ gga AAACCCGTAGGGCACGGTAAACAATAGTGTTGTCGGTGGCTTGTTCGCCCGGCATGTCCCCATGATCNAGTTGGGGCTTCCTCCCGTTCCTGGAGCTCCTCCCCCTCCTGTTGACCGGTCTGCTCTCAAGATTCCGGTTGTGGGGAGTTCCTTGGCGAGGGGCGGGTTGCTAGCTGGGTTGGCAGATTTGCTTGGAGTTCGAGAGCCTCAGCACTGCATGTGCCTAGCTTCTCTTGCGTCTGCGAGGTGTTTGGTTTGGTGGAGTTGGTGCATGAAATCCCTACGACGCAACCTGTCGATGGTGTTTGGGGTGGAGTCGGAGCTGCTTGG CCGGGTGTGGCAAGCTGGGC AACGATAACCCCCTTGCCCCTTC TTTTTGGTA ] [-] EMBL C74795 [ AACAATAGTGTTGTCGGTGGCTTGTTCG CCGGCATGT CCCATGATC AGTTGGGGC TCCTCCCGTTCCTGGAGCTCCT CCCCTCCTGTTGACCGGTCTGCTCTC AGATTCCGGTTGTGGGGAGTTCCTTGGCGAGGGGCGGGTTGCTAGCTGGGTTGGCAGATTTGCTTGGAGTTCGAGAGCCTCAGCACTGCATGTGCCTAGCTTCTCTTGCGTCTGCGAGGTGTTTGGTTTGGTGGAGTTGGTGCATGAAATCCCTACGACGCAACCTGTCGATGGTGTTTGGGGTGGAGTCGGAGCTGCTTGG CCGGGTGTGGCAAGCTGGGC AACGATAACCCCCTTGCCCCTTC TTTTTGGTA ] [+] EMBL AK059367 [ TGGGGC TCCTCCCGTTCCTGGAGCTCCT CCCCTCCTGTTGACCGGTCTGCTCTC AGATTCCGGTTGTGGGGAGTTCCTTGGCGAGGGGCGGGTTGCTAGCTGGGTTGGCAGATTTGCTTGGAGTTCGAGAGCCTCAGCACTGCATGTGCCTAGCTTCTCTTGCGTCTGCGAGGTGTTTGGTTTGGTGGAGTTGGTGCATGAAATCCCTACGACGCAACCTGTCGATGGTGTTTGGGGTGGAGTCGGAGCTGCTTGG CCGGGTGTGGCAAGCTGGGC AACGATAACCCCCTTGCCCCTTC TTTTTGGTAGCTTCGTTGGGGT GGCTGTGCTGTT GGCTT CCTGGCGTGTCTTTGGGTAGGTGTGTTGGGGGGAGTCGG AGCTGCTTGTAGGTGACAAGCTC GGCAACGATAACCCTCTCCCGCTTT CCTTGGTAGCGTTGTGGAAGCCAGGGGTGTCGTAGTTGGCAGGGAGAGCGAGCCGGGGCGTTTTGTCCTGCTCGTTCTTAGGATAGAGGCAACGATGGCGACGCCTGTGGGCGCCGTTTTCCTTGTTGAAGGCATCGTTCTTTGCTCTACCCGTTTTCTTCGGGTGAAAACCCTGTTCCGATTTTCGGACGGACGTTGCTTGCGTTTCGACGCTCTGTTTCCTCCTTGGAGGCTTCGTCTTGAAGACCCTGCTCTACGTTGTCTGTGGTCTGTTCATAGGAAGTCGGAGTTTTTGGCTTTGATGAGCTATGTTCTCCTCCAGTTGTGCCGTCGCAAGTTTTTTCTTTGTTCTCCTTGTGGGTTTTGCCCGGTTTCCCCTTTAAACCGTGCTTATGTAAGGTTTTTGGGCCCGGTTTCCCCTCAAAACCTGGGTCAAGTCTCTTCTTCTTTAATGAAAACAGGCTCTCCCTGACCTCTTCTGAG ] [+] EMBL AU077835 [ GGGNTGAATTC GAACTGCTTGGCCCGGTTGTGCCAAG TGGCC ACCGATANCCCCCTTGCCCTTTC TTTTTGGTAGCTTCGTTGGGGT GCCTGTGCTGTTGGGCTT CCTGGCGTGTCTTTGGGTAGGTGTGTTGGGGGAAGTCGGAAGCTGCTTGTAGGTGACAAGCTCGGGCANCGATAACCCTCTCCCGCTTT CCTTGGTAGCGTTGTGGAAGCCAGGGGTGTCGTAGTTGGCAGGGAGAGCGAGCCGGGGCGTTTTGTCCTGCTCGTTCTTAGGATAGAGGCAACGATGGCGACGCCTGTGGGCGCCGTTTTCCTTGTTGAAGGCATCGTTCTTTGCTCTACCCGTTTTCTTCGGGTGAAAACCCTGTTCCGATTTTCGGACGGACGTTGCTTGCGTTTCGACGCTCTGTTTCCTCCTTGGAGGCTTCGTCTTGAAGACCCTGCTCTACGTTGTCTGTGGTCTGTTCATAGGAAGTCGGAGTTTTTGGCTTTGATGAGCTATGTTCTCCTCCAGTTGTGCCGTCGCAAGTTTTTTCTTTGTTCTCCTTGTGGGTTTTGCCCGGTTTCCCCTTTAAACCGTGCTTATGTAAGGTTTTTGGGCCCGGTTTCCCCTCAAAACCTGGGTCAAGTCTCTTCTTCTTTAATGAAAACAGGCTCTCCCTGACCTCTTCTGAGGTTTTTCCTCAAAAA ] [+] EMBL C96909 [ TGGCCCGGGTTTTGGAAACTNGGCAAACGATAACCCCNTTGCCCCTTC TTTNTGGTAGCTTCGTTGGGGTNGGCTGTGCTGTT GGCTTCCCTGGCGTGNCTTTGGGTAGGTGTGTTGGGGGGAGTCGG AGCTGCTTGTAGGTGACAAGCTC GGCAACGATAACCCTCTCCCGCTTT CCTTGGTAGCGTTGTGGAAGCCAGGGGTGTCGTAGTTGGCAGGGAGAGCGAGCCGGGGCGTTTTGTCCTGCTCGTTCTTAGGATAGAGGCAACGATGGCGACNCCTNTGGGCGCCGTTTTCCTTGTTGAAGGCATCGTTCTTTGCTCTACCCGTTTTCTTCGGGTGAAAACCCTGTTCCGATTTTCGGACGGACGTTGCTTGCGTTTCGACGCTCTGTTTCCTCCTTGGAGGCTTCGTCTTGAAGACCCTGCTCTACGTTGTCTGTGGTCTGTTCATAGGAAGTCGGAGTTTTTGGCTTTGATGAGCTATGTTCTCCTCCAGTTGTGCCGTCGCAAGTTTTTTCTTTGTTCTCCTTGTGGGTTTTGCCCGGTTTCCCCTTTAAACCGTGCTTATGTAAGGTTTTTGGGCCCGGTTTCCCCTCAAAACCTGGGTCAAGTCTCTTCTTCTTTAATGAAAACAGGCTCTCCCTGACCTCTTCTGAGGTTTTTCCTCAAAAAAAAAAAAAAAAAAAAAAAAAA ] [+] EMBL AU162924 [ CCCCTTGCCCCTTCTTTTTTGGTAGCTTCGTTGGGGT GGCTGTGCTGTT GGCTT CCTGGCGTGTCTTTGGGTAGGTGTGTTGGGGGGAGTCGG AGCTGCTTGTAGGTGACAAGCTC GGCAACGATAACCCTCTCCCGCTTTCCCTTGGTACCGTTGTGGAAGCCAGGGGTGTCGTAGTTGGCAGGGAGAGCGAGCCGGGGCGTTTTGTCCTGCTCGTTCTTAGGATAGAGGCAACGATGGCGACGCCTGTGGGCGCCGTTTTCCTTGTTGAAGGCATCGTTCTTTGCTCTACCCGTTTTCTTCGGGTGAAAACCCTGTTCCGATTTTCGGACGGACGTTGCTTGCGTTTCGACGCTCTGTTTCCTCCTTGGAGGCTTCGTCTTGAAGACCCTGCTCTACGTTGTCTGTGGTCTGTTCATAGGAAGTCGGAGTTTTTGGCTTTGATGAGCTATGTTCTCCTCCAGTTGTGCCGTCGCAAGTTTTTTCTTTGTTCTCCTTGTGGGTTTTGCCCGGTTTCCCCTTTAAACCGTGCTTATGTAAGGTTTTTGGGCCCGGTTTCCCCTCAAAACCTGGGTCAAGTCTCTTCTTCTTTAATGAAAACAGGCTCTCCNTGACCTCTTCTGAGGTTTTTCCTCAAAAA ] [+] EMBL AU096404 [ CGATTTTCGGACGGACNTTGCTTGCGTTTCGACGNTCTGTTTCCTCCTTGGAGGCTTCGTCTTGAAGACCCTGCTCTACGTTGTCTGTGGTCTGTTCATAGGAAGTCGGAGTTTTTGGCTTTGATGAGCTATGTTCTCCTCNAGTTGTNCCGTCGCAAGTTTTTTCTTTGTTCTCCTTGTGGGTTTTGCCCGGTTTCCCNTTTAAACCGTGCTTATGTAAGGTTTTTGGGCCCGGTTTCCCNTNAAAACCTGGGTCAAGTCTCTTCTTCTTTAATGAAAACAGGCTCTCCCTGACCTCTTCTGAGGTTTTTCCTCAAAAA ] [+] EMBL AU095030 [ GAAGACCCTGCTNTACGTTGTCTGTGGNCTGTTCATAGGAAGTCGGAGTTTTTGGCTTTGATGAGCTNTGTTCNCCTCCAGTTGTNCCNTCGCAAGTTTTTTCTTTGTTCNCCTTGTGGGTTTTGCCCGGTTTCCCCTTTAANCCGTGCTTATGTAAGGTTTTTGGGCCCGGTTTCCCCTCAAAACCTGGGTCAAGTCTCTTCTTCTTTAATGAAAACAGGCTNTCCCTGACCTCTTNTGNGGTTTTTCCTCAAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNAAAAAAAA] [+] EMBL AU095029 [ ACGTTGTCTGTGGTCTGTTCATAGGAAGTCGGAGTTTTTGGCTTTGATGAGCTATGTTCTCCNCCAGTTGTGCCGTCGCAAGTTTTTTCTTTGTTCNCCTTGTGGGTTTTGCCCGGTTTCCCCTTTAAACCGTGCTTATGTAAGGTTTTTGGGCCCGGTTTCCCCTCAAAACCTGGGTCAAGTCTNTTCTTCTTTAATGNAAACAGGNTCTCCCTGNCCTCTTCTGNNGTTTTTCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAA ] consensusID : consensus_15523#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 449 fasta sequence [TGCATGTGCCTAGCTTCTCTTGCGTCTGCNAGGTGTTTGGTTTGGTGGAGTTGGTGCATGAAATCCCTACGACGCAACCTGTCGATGGTGTTTGGGGTGGAGTCGGAGCTGCTTGGCCGGGTGTGGCAANCTGGGCAACGATAACCCCCTTGCCCCTTCTTTTTGGTAGCTTCGTTGGGGTGGCTGTGCTGTTGGCTTCCTGGCGTGTCTTTGGGTAGGTGTGTTGGGGGGAGTCGGAGCTGCTTGTAGGTGACAAGCTCGGCAACGATAACCCTCTCCCGCTTTCCTTGGTAGCGTTGTGGAAGCCAGGGGTGTCGTAGTTGGCAGGGAGAGCGAGCCGGGGCGTTTTGTCCTGCTCGTTNTTAGGATAGAGGCAACGATGGCGACGCCTGTGGGCGCCGTTTTCCTTGTTGAAGGCATCGTTCTTTGCTNTAAAAAAAAAAAAAAAA] [+] EMBL AU173310 [TGCATGTGCCTAGCTTCTCTTGCGTCTGCNAGGTGTTTGGTTTGGTGGAGTTGGTGCATGAAATCCCTACGACGCAACCTGTCGATGGTGTTTGGGGTGGAGTCGGAGCTGCTTGGCCGGGTGTGGCAANCTGGGCAACGATAACCCCCTTGCCCCTTCTTTTTGGTAGCTTCGTTGGGGTGGCTGTGCTGTTGGCTTCCTGGCGTGTCTTTGGGTAGGTGTGTTGGGGGGAGTCGGAGCTGCTTGTAGGTGACAAGCTCGGCAACGATAACCCTCTCCCGCTTTCCTTGGTAGCGTTGTGGAAGCCAGGGGTGTCGTAGTTGGCAGGGAGAGCGAGCCGGGGCGTTTTGTCCTGCTCGTTNTTAGGATAGAGGCAACGATGGCGACGCCTGTGGGCGCCGTTTTCCTTGTTGAAGGCATCGTTCTTTGCTNTAAAAAAAAAAAAAAAA] [+] EMBL AU184753 [ CTGCGAGGTGTTTGGTTTGGTGGAGTTGGTGCATGAAATCCCTACGACGCAACCTGTCGATGGTGTTTGGGGTGGAGTCGGAGCTGCTTGGCCGGGTGTGGCAAGCTGGGCAACGATAACCCCCTTGCCCCTTCTTTTTGGTAGCTTCGTTGGGGTGGCTGTGCTGTTGGCTTCCTGGCGTGTCTTTGGGTAGGTGTGTTGGGGGGAGTCGGAGCTGCTTGTAGGTGACAAGCTCGGCAACGATAACCCTCTCCCGCTTTCCTTGGTAGCGTTGTGGAAGCCAGGGGTGTNGTAGTTGGCAGGGAGAGCGAGCCGGGGCGTTTTGTCCTGCTCGTTNTTAGGATAGAGGCAACGATGGCGACGCCTGTGGGCGCCGTTTTCCTTGTTGAAGGCATCGTTNTTTGCTNTAAAAAAAAAAAAAAAA] consensusID : consensus_15523#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 142 fasta sequence [TTGTCCTGCTCGTTCTTAGGATAGAGGCAACGATGTCGACGCCTGTGGGCGCCGTTTTCCTTGTTGAAGGCATCGTTCTTTGCTCTACCCGTTTTCTTCGGGTGAAAANTCTGTTCCGATTTTCGGANGGAAAAAAAAAAAA] [+] EMBL C98359 [TTGTCCTGCTCGTTCTTAGGATAGAGGCAACGATGTCGACGCCTGTGGGCGCCGTTTTCCTTGTTGAAGGCATCGTTCTTTGCTCTACCCGTTTTCTTCGGGTGAAAANTCTGTTCCGATTTTCGGANGGAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15523#0 AAGACGTCGCTAATTGAGAGGACCGTCCGCGTCGCTCCCCGCGTGANAACCGGGCGGGCG 60 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 TCAACCCTAGCGCCGCCGCCGCTTTCCCTCTCCCTCCCCCANCCCGCCGCTGCCGGAGCG 120 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 GCCGGGCCTCGGCTCAGTGTGCAAGGACGGCGGCGGCGGGGCAGTTTGCCGTGGAACGCG 180 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 GGCCCGGTCCTGCGCGGGGAGGTCGGTCGGCGTTCGGTGGTGGCTGCGGCGACCCGACGG 240 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 CGAGTCACTCTAGCGACGGCGGCGGGGTGGGACGACGAAGAGCAGCAGCTCCTTGGAGAC 300 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 GGCGGGAGGAAGTTGAAGGCCGGAGACGGAGGGGACGGCCAGATCCGGCCGTCTCCTTTC 360 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 TGGATCTGGAGGTCGTCGGGGTGGGGGTGATGGCGGCGGGGTGGTGAAGGTGAGACCGGC 420 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 GCCAGTGCTCGGAAGAAGGCCAGAGGGGAAGGGGCGGCCAGCGGTCTGCGATGGTGATGG 480 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 CCGGTGGAGGCGGTGCGCCGGTGCTAGCCGGCGTAGGTGGAGCCCAGTTTGGGCAAGATG 540 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 CATGTGGCCGGCGGAGGTAAGCAAGTTGGTGACCGGCGGAGGTGGTTGTTGCCGGCGAAG 600 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 AGGGTGTCGAGGTGGCCGGAGAAGTTGCTGGCCTGCAGGGAGGTTGTGCTTGGGTTGGTC 660 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 GGGCGGTCGCTACTATGGCTCGTTCGTTTGGAAAGCCGTAGGGCACGGTGAACAATAGTG 720 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 TTGTCGGTGGCTTGTTCGCCGGCATGTCCCATGATCAGTTGGGGCTCCTCCCGTTCCTGG 780 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 AGCTCCTCCCCTCCTGTTGACCGGTCTGCTCTCAGATTCCGGTTGTGGGGAGTTCCTTGG 840 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 CGAGGGGCGGGTTGCTAGCTGGGTTGGCAGATTTGCTTGGAGTTCGAGAGCCTCAGCACT 900 consensus_15523#1 -----------------------------------------------------------T 1 consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 GCATGTGCCTAGCTTCTCTTGCGTCTGCGAGGTGTTTGGTTTGGTGGAGTTGGTGCATGA 960 consensus_15523#1 GCATGTGCCTAGCTTCTCTTGCGTCTGCNAGGTGTTTGGTTTGGTGGAGTTGGTGCATGA 61 consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 AATCCCTACGACGCAACCTGTCGATGGTGTTTGGGGTGGAGTCGGAGCTGCTTGGCCGGG 1020 consensus_15523#1 AATCCCTACGACGCAACCTGTCGATGGTGTTTGGGGTGGAGTCGGAGCTGCTTGGCCGGG 121 consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 TGTGGCAAGCTGGGCAACGATAACCCCCTTGCCCCTTCTTTTTGGTAGCTTCGTTGGGGT 1080 consensus_15523#1 TGTGGCAANCTGGGCAACGATAACCCCCTTGCCCCTTCTTTTTGGTAGCTTCGTTGGGGT 181 consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 GGCTGTGCTGTTGGCTTCCTGGCGTGTCTTTGGGTAGGTGTGTTGGGGGGAGTCGGAGCT 1140 consensus_15523#1 GGCTGTGCTGTTGGCTTCCTGGCGTGTCTTTGGGTAGGTGTGTTGGGGGGAGTCGGAGCT 241 consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 GCTTGTAGGTGACAAGCTCGGCAACGATAACCCTCTCCCGCTTTCCTTGGTAGCGTTGTG 1200 consensus_15523#1 GCTTGTAGGTGACAAGCTCGGCAACGATAACCCTCTCCCGCTTTCCTTGGTAGCGTTGTG 301 consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 GAAGCCAGGGGTGTCGTAGTTGGCAGGGAGAGCGAGCCGGGGCGTTTTGTCCTGCTCGTT 1260 consensus_15523#1 GAAGCCAGGGGTGTCGTAGTTGGCAGGGAGAGCGAGCCGGGGCGTTTTGTCCTGCTCGTT 361 consensus_15523#2 ----------------------------------------------TTGTCCTGCTCGTT 14 ************** consensus_15523#0 CTTAGGATAGAGGCAACGATGGCGACGCCTGTGGGCGCCGTTTTCCTTGTTGAAGGCATC 1320 consensus_15523#1 NTTAGGATAGAGGCAACGATGGCGACGCCTGTGGGCGCCGTTTTCCTTGTTGAAGGCATC 421 consensus_15523#2 CTTAGGATAGAGGCAACGATGTCGACGCCTGTGGGCGCCGTTTTCCTTGTTGAAGGCATC 74 ******************** ************************************** consensus_15523#0 GTTCTTTGCTCTACCCGTTTTCTTCGGGTGAAAACCCTGTTCCGATTTTCGGACGGACGT 1380 consensus_15523#1 GTTCTTTGCTNTAAAAAAA------AAAAAAAAA-------------------------- 449 consensus_15523#2 GTTCTTTGCTCTACCCGTTTTCTTCGGGTGAAAANTCTGTTCCGATTTTCGGANGGAAAA 134 ********** ** **** consensus_15523#0 TGCTTGCGTTTCGACGCTCTGTTTCCTCCTTGGAGGCTTCGTCTTGAAGACCCTGCTCTA 1440 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 AAAAAAAA---------------------------------------------------- 142 consensus_15523#0 CGTTGTCTGTGGTCTGTTCATAGGAAGTCGGAGTTTTTGGCTTTGATGAGCTATGTTCTC 1500 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 CTCCAGTTGTGCCGTCGCAAGTTTTTTCTTTGTTCTCCTTGTGGGTTTTGCCCGGTTTCC 1560 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 CCTTTAAACCGTGCTTATGTAAGGTTTTTGGGCCCGGTTTCCCCTCAAAACCTGGGTCAA 1620 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 GTCTCTTCTTCTTTAATGAAAACAGGCTCTCCCTGACCTCTTCTGAGGTTTTTCCTCAAA 1680 consensus_15523#1 ------------------------------------------------------------ consensus_15523#2 ------------------------------------------------------------ consensus_15523#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1723 consensus_15523#1 ------------------------------------------- consensus_15523#2 ------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||