Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 15529 cluster # 15529       Sequences # 22       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15529#0 length = 2878 sequences # 19  
 consensus_15529#1 length = 650 sequences # 2  
consensus_15529#2 length = 301 sequences # 1  
consensusID : consensus_15529#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 19
consensus length = 2878
fasta sequence 
                              [CCTCCCCTCAATGCGCCTCAGCTTCGCCTCCGCCCCCAAATCGTAAACCCTAGCCGGCAACCTCCCCCCCGCGGGGCAGCCATGGGCGCCAGCCGGAAGCTGCAGGGCGAGATCGACCGCG-TCCTCAAGAAGGTCCAGGAGGGCGTCGACGTCTTCGACAGCATCTGGAACAAGGTCTACGACACCGAGAATGCGAACCAGAAGGAGAAGTTCGAGGCCGACCTCAAGAAGGAGATCAAGAAGCTGCAGC-GGTACAGGGACCAGATCAAGACGTGGATCCAGTCCAGCGAGATCAAGGACAAGAAGGCTCTTATGGATGCCCGAAAGCAGATTGAACGCGAGATGGAACGATTTAAGGTTTGTGAGAAGGAAACTAAAACGAAGGCCTTTTCCAAGGAAGGGTTAGGTCAACAACCGAAAACTGATCCAAAAGAGAAGGC-AAAAGCTGAAACAAGAGATTGGCTTAACAATGTGGTTAGTGATTTGGAAAACCAAATCGATAACTTCGAAGCTGAGGTTGAAGGACTTTCAATTAAGAAA-GGAAAGC-AAAGACCTCCTCGATTGGTACATTTA-GAGAAATCTATCACACGGCATAAAGCTCACAT-AAAGAAATTGGAGTCAATATTAAGAC-TTTTGGATAATGATGAG-TTGAGTCCTGAGCAAGTTAATGATGTG-AAAG-ATTTCCTGGATGACTATGTTGAACGTAACCAGGAAGATTTTGATGAATTTAGTGATGTGGAAGAGCTCTATAGCACATTACCTATGGAGAAGGTTGAAGCAC-TAGAAGACATGGTTTCACTTGCCCCTTCCAGTCTTGTCAAGGGTGTTGCTTCTGTTTCTACTACTGCAG-TTTTG-AGTACGAAGAGTTCTGTA-GCAACTTCACCTACTCAGGCTACTGTATCAGCAGCTCCTTCGCTAAGTGTATCACAAGATCAAGCAGAGGAAACGGCTTCACAAGAAAGCAATCCTGAATCGGCACCACAGACACCACCTTCAAAAGTTGGAAGTCAACCTTCAGTGCCAGTCGTGCCGACTACCATCAGTACTAGTACCGCTGCTGTCTCTGTTTCAGCTGAAACCATTAGTTCCCCTGTACGCCCAATTGTTCCTACCACAACAGCTGCAGTACTTCCTGCTTCTGTCACTGCTCGAAGTGCTCCAGAGAACATACCAGCTGTTACTTCAGCTCCTGCGAACTCATCTAGTACCTTGAAGGATGATGACAACATGAGCTTTCCTTCACGTAGATCATCACCTGCAGTCACCGAAATTGGCCTTGGCAGGGGTATTACTCGTGGATTAACTAGTCAGGGATTAGGTTCAGCTCCAATAAGTATAGGTCCAGTATCAGGGAATGGATCAGTTAGTGCACTTACTGACTTGTCCAAAAGAAACATGTTGAATACTGATGAGAGGATTAACAGTGGTGGTATTTCTCAGCAGTTGATTTCACCACTTGGTAATAAAGCTCAACCTCAGCAGGTTCTGAGGACTACTGATACAATTAGCTCTGATTCTAGTAACACAAATGAGAGTACTGTTCTTGGAGGAAGAATCTTTTCTCCCCCAGTTGTTTCTGGGGTTCAATGGAGGCCTCAAAACACTGCTGGTTTGCAAAATCAAAGTGAAGCGGGCCAATTTTGTGGAAGACCTGAAATTTCTGCAGATCAAAGGGAGAAGTACCTGCAAAGATTGCAGCAAGTACAACAACAAGGCAGCCTTCTTAATGTTTCTCATATAACGGGCATAAGTCAGAAGCAATTTCCATCACAACAACCAAACCCGCTCTTACAACAGTTTAACTCTCAGAGTTCCTCTATTTCCTCCCAAGCGGGTATTGGGCTTGGGCAGGTACAAGTACCAGAATCTGGGCATACAAAAAGTGAGGAACAACAACAAAGTTTTGCAGAAGATGTTAGTGTGGAATCCGTTGCAACAGCTGGAGCAAACAAACACATGAGTGAAGATGATACAAAGATTCCATTTTCGAATCCGTCAGCATCCATAACAGAAGGTACTCAACTATCTAGAGACCCTGATCTACCAGCTGGGCAGCCTTTGCAACCTGGCATGTCATCATCTGGTGT-TGGTGTTATCGGCCGGAGGAGT-GTATCTGATCTTGGTGCAATTGGTGATAACCTCAGTGTAGCTTCTGCAAGTACTAGTCATGATCTGCTTTATAATCTGCAAATGCTTGAAGCTGCTTTCCATAGGCTTCCACAACCAAAGGACTCGGAGCGAGTCAAAAATTATATTCCGAAGCACCCTGCAGTCACCCCTGCCAGCTTCCCGCAAATTCAGGCACCTGTAGTATCAAATCCTGCCTTTTGGGAAAGAATGGGTGGCGATTCATTATCTACGGA-TTTGTT-GTTCTTTGCTTTCTACTATCAGCAAAACACATACCAGCAATTTTTAAGTGCCAGAGAACTAAAGAAGCAATCGTGGAGA-TTTCACAG-AAAGTACAATACTTGGTTCCAACGGCACGTGGAGCCACAAGTTACAACTGATGAGTATGAGCGGGGATCTTATGTGTACTTTGATTTCCAT-GTCATAGATGACGGCACAGGATCAGGATGGTGTCAGAGAATCAAGAACGACTTCACATTTGAGTACAACTTCCTTGAGGATGAGCTGTCAGTACAGAC-AAATTAGAGAGCCAGGATATTAGGGCTAATCAAATCATTTTCACCATTGTGAATCTTGTAACTTTTAGAACGGAACTGCTGGAATCTGGAACACTTACAGATTAACTTTGTGGTTGGATTT-AAAAGCTGTTCTGTGCCTTCCTTTCCATTCATATTCATACACAATGGCCAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CB672584             [CCTCCCCTCAATGCGCCTCAGCTTCGCCTCCGCCCCCAAATCGTAAACCCTAGCCGGCAACCTCCCCCCCGCGGGGCACCCATGGGCGCCAGCCGGAAGCTGCAGGGCGAGATCGACCGCGCTCCTCAAGAAGGTCCAGGAGGGCGTCAACGTCTTCCACAGCATCTGGAACAAGGTCTACGACACCGAGAATGCGAACCAGAAGGAGAAGTTCGAGGCCGACCTCAAGAAGGAGATCAAGAAGCTGCAGC GGTACAGGGACCAGATCAAGACGTGGATCCAGTCCAGCGAGATCAAGGACAAGAAGGCTCTTATGGATGCCCGAAAGCAGATTGAACGCGAGATGGAACGATTTAAGGTTTGTGAGAAGGAAACTAAAACGAAGGCCTTTTCCAAGGAAGGGTTAGGTCAACAACCGAAAACTGATCCAAAAGAGAAGGC AAAAGCTGAAACAAGAGATTGGCTTAACAATGTGGCTAGTGATTTGGAAAACCAAATCGATAACTTCTAAGCTGAGGTTGAAGGACTTTCAATTAAGAAA GGAAAGC AAAGACCTCCTCGATTGGTACATTTA GAGAAATCTATCACACGGCATAAAGCTCACAT AAAGAAATTGGAGTCAATATTAAGAC TTTTGGATAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB650505             [               CCTCACCTTCGCCTCCGCCCCCAAATCGTAAACCCTAGCCGGCAACCTCCCCCCCGCGGGGCAGCCATGGGCGCCAGCCGGAAGCTGCAGGGCGAGATCGACCGCG TCCTCAAGAAGGTCCAGGAGGGCGTCGACGTCTTCGACAGCATCTGGAACAAGGTCTACGACACCGAGAATGCGAACCAGAAGGAGAAGTTCGAGGCCGACCTCAAGAAGGAGATCAAGAAGCTGCAGC GGTACAGGGACCAGATCAAGACGTGGATCCAGTCCAGCGAGATCAAGGACAAGAAGGCTCTTATGGATGCCCGAAAGCAGATTGAACGCGAGATGGAACGATTTAAGGTTTGTGAGAAGGAAACTAAAACGAAGGCCTTTTCCAAGGAAGGGTTAGGTCAACAACCGAAAACTGATCCAAAAGAGAAGGC AAAAGCTGAAACAAGAGATTGGCTTAACAATGTGGTTAGTGATTTGGAAAACCAAATCGATAACTTCGAAGCTGAGGTTGAAGGACTTTCAATTAAGAAA GGAAAGC AAAGACCTCCTCGATTGGTACATTTA GAGAAATCTATCACACGGCATAAAGCTCACAT AAAGAAATTGGAGTCAATATTAAGAC TTTTGGATAATGATGAG TTGAGTCCTGAGCAAGTTAATGATGTG AAAG ATTTCCTGGATGACTATGTTGAACGTAACCAGGAAGATTTTGATGAATTTAGTGATGTGGAAGAGCTCTATAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB663340             [                         GCCTCCGCCCCCAAATCGTAAACCCTAGCCGGCAACCTCCCCCCCGCGGGGCAGCCATGGGCGCCAGCCGGAAGCTGCAGGGCGAGATCGACCGCG TCCTCAAGAAGGTCCAGGAGGGCGTCGACGTCTTCGACAGCATCTGGAACAAGGTCTACGACACCGAGAATGCGAACCAGAAGGAGAAGTTCGAGGCCGACCTCAAGAAGGAGATCAAGAAGCTGCAGC GGTACAGGGACCAGATCAAGACGTGGATCCAGTCCAGCGAGATCAAGGACAAGAAGGCTCTTATGGATGCCCGAAAGCAGATTGAACGCGAGATGGAACGATTTAAGGTTTGTGAGAAGGAAACTAAAACGAAGGCCTTTTCCAAGGAAGGGTTAGGTCAACAACCGAAAACTGATCCAAAAGAGAAGGC AAAAGCTGAAACAAGAGATTGGCTTAACAATGTGGTTAGTGATTTGGAAAACCAAATCGATAACTTCGAAGCTGAGGTTGAAGGACTTTCAATTAAGAAA GGAAAGC AAAGACCTCCTCGATTGGTACATTTA GAGAAATCTATCACACGGCATAAAGCTCACAT AAAGAAATTGGAGTCAATATTAAGAC TTTTGGATAATGATGAG TTGAGTCCTGAGCAAGTTAATGATGTG AAAG ATTTCCTGGATGACTATGTTGAACGTAACCAGGAAGATTTTGATGAATTTAGTGATGTGGAAGAGCTCTATAGCACATTACCTATGGAGAAGGTTGAAGCAC TAGAAGACATGGTTTCACTTGCCCCTT CAGTCTTGTCAAGGGTG TGCTTCTGTTTCTACTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU056504             [                                       ATCGTAAACCCTAGCCGGCAACCTCCCCCCCGCGGGGCAGCCATGGGCGCCAGCGGNAAGCTGCAGGGCGAGATCGACCGCG TCCTCAAGAAGGTCCAGGAGGGCGTCGACGTCTTCGACAGCATCTGGAACAAGGTCTACGACACCGAGAATGCGAACCAGAAGGAGAAGTTCGAGGCCGACCTCAAGAAGGAGATCAAGAAGCTGCAGCGGGTACAGGGACCAGATCAAGACGTGGATCCAGTCCAGCGAGATCAAGGACAAGAAGGCTCTTATGGATGCCCGAAAGCAGATTGAACGCGAGATGGAACGATTTAAGGTTTGTGAGAAGGAAACTAAAACGAAGGCCTTTTCCAAGGAAGGGTTAGGTCAACAACCGAAAACTGATCCAAAAGAGAAGGCAAAAAGCTGAAACAAGAGATTGGCTTAACAATGTGGTTAGTGATTTGGAAAACCAAATCGATAACTTCGAAGCTGAGGTTGAAGGACTTTCAATTAAGAAAGGGNAAGCAAAAGACCTCCTCGATTGGTACATTTAGGAGAAATCTATCACACGGCATAAAGCTCACATAAAAGAAATTGGAGTCAATATTAAGACTTTTTGGATAATGATGAGTTTGAGTCCTGAGCAAGTTAATGATGTGAAAAGNTTTTCCTGGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK102019             [                                                         CAACCTCCCCCCCGCGGGGCAGCCATGGGCGCCAGCCGGAAGCTGCAGGGCGAGATCGACCGCG TCCTCAAGAAGGTCCAGGAGGGCGTCGACGTCTTCGACAGCATCTGGAACAAGGTCTACGACACCGAGAATGCGAACCAGAAGGAGAAGTTCGAGGCCGACCTCAAGAAGGAGATCAAGAAGCTGCAGC GGTACAGGGACCAGATCAAGACGTGGATCCAGTCCAGCGAGATCAAGGACAAGAAGGCTCTTATGGATGCCCGAAAGCAGATTGAACGCGAGATGGAACGATTTAAGGTTTGTGAGAAGGAAACTAAAACGAAGGCCTTTTCCAAGGAAGGGTTAGGTCAACAACCGAAAACTGATCAAAAAGAGAAGGC AAAAGCTGAAACAAGAGATTGGCTTAACAATGTGGTTAGTGATTTGGAAAACCAAATCGATAACTTCGAAGCTGAGGTTGAAGGACTTTCAATTAAGAAA GGAAAGC AAAGACCTCCTCGATTGGTACATTTA GAGAAATCTATCACACGGCATAAAGCTCACAT AAAGAAATTGGAGTCAATATTAAGAC TTTTGGATAATGATGAG TTGAGTCCTGAGCAAGTTAATGATGTG AAAG ATTTCCTGGATGACTATGTTGAACGTAACCAGGAAGATTTTGATGAATTTAGTGATGTGGAAGAGCTCTATAGCACATTACCTATGGAGAAGGTTGAAGCAC TAGAAGACATGGTTTCACTTGCCCCTTCCAGTCTTGTCAAGGGTGTTGCTTCTGTTTCTACTACTGCAG TTTTG AGTACGAAGAGTTCTGTA GCAACTTCACCTACTCAGGCTACTGTATCAGCAGCTCCTTCGCTAAGTGTATCACAAGATCAAGCAGAGGAAACGGCTTCACAAGAAAGCAATCCTGAATCGGCACCACAGACACCACCTTCAAAAGTTGGAAGTCAACCTTCAGTGCCAGTCGTGCCGACTACCATCAGTACTAGTACCGCTGCTGTCTCTGTTTCAGCTGAAACCATTAGTTCCCCTGTACGCCCAATTGTTCCTACCACAACAGCTGCAGTACTTCCTGCTTCTGTCACTGCTCGAAGTGCTCCAGAGAACATACCAGCTGTTACTTCAGCTCCTGCGAACTCATCTAGTACCTTGAAGGATGATGACAACATGAGCTTTCCTTCACGTAGATCATCACCTGCAGTCACCGAAATTGGCCTTGGCAGGGGTATTACTCGTGGATTAACTAGTCAGGGATTAGGTTCAGCTCCAATAAGTATAGGTCCAGTATCAGGGAATGGATCAGTTAGTGCACTTACTGACTTGTCCAAAAGAAACATGTTGAATACTGATGAGAGGATTAACAGTGGTGGTATTTCTCAGCAGTTGATTTCACCACTTGGTAATAAAGCTCAACCTCAGCAGGTTCTGAGGACTACTGATACAATTAGCTCTGATTCTAGTAACACAAATGAGAGTACTGTTCTTGGAGGAAGAATCTTTTCTCCCCCAGTTGTTTCTGGGGTTCAATGGAGGCCTCAAAACACTGCTGGTTTGCAAAATCAAAGTGAAGCGGGCCAATTTTGTGGAAGACCTGAAATTTCTGCAGATCAAAGGGAGAAGTACCTGCAAAGATTGCAGCAAGTACAACAACAAGGCAGCCTTCTTAATGTTTCTCATATAACGGGCATAAGTCAGAAGCAATTTCCATCACAACAACCAAACCCGCTCTTACAACAGTTTAACTCTCAGAGTTCCTCTATTTCCTCCCAAGCGGGTATTGGGCTTGGGCAGGTACAAGTACCAGAATCTGGGCATACAAAAAGTGAGGAACAACAACAAAGTTTTGCAGAAGATGTTAGTGTGGAATCCGTTGCAACAGCTGGAGCAAACAAACACATGAGTGAAGATGATACAAAGATTCCATTTTCGAATCCGTCAGCATCCATAACAGAAGGTACTCAACTATCTAGAGACCCTGATCTACCAGCTGGGCAGCCTTTGCAACCTGGCATGTCATCATCTGGTGT TGGTGTTATCGGCCGGAGGAGT GTATCTGATCTTGGTGCAATTGGTGATAACCTCAGTGTAGCTTCTGCAAGTACTAGTCATGATCTGCTTTATAATCTGCAAATGCTTGAAGCTGCTTTCCATAGGCTTCCACAACCAAAGGACTCGGAGCGAGTCAAAAATTATATTCCGAAGCACCCTGCAGTCACCCCTGCCAGCTTCCCGCAAATTCAGGCACCTGTAGTATCAAATCCTGCCTTTTGGGAAAGAATGGGTGGCGATTCATTATCTACGGA TTTGTT GTTCTTTGCTTTCTACTATCAGCAAAACACATACCAGCAATTTTTAAGTGCCAGAGAACTAAAGAAGCAATCGTGGAGA TTTCACAG AAAGTACAATACTTGGTTCCAACGGCACGTGGAGCCACAAGTTACAACTGATGAGTATGAGCGGGGATCTTATGTGTACTTTGATTTCCAT GTCATAGATGACGGCACAGGATCAGGATGGTGTCAGAGAATCAAGAACGACTTCACATTTGAGTACAACTTCCTTGAGGATGAGCTGTCAGTACAGAC AAATTAGAGAGCCAGGATATTAGGGCTAATCAAATCATTTTCACCATTGTGAATCTTGTAACTTTTAGAACGGAACTGCTGGAATCTGGAACACTTACAGATTAACTTTGTGGTTGGATTT AAAAGCTGTTCTGTGCCTTCCTTTCC                                                                                      ]
[+] EMBL CB635467             [                                                                                                                                                                                                                                                                                                                   GGCTCTTACGGATGCCCGAAAGCAGATTGAACGCGAGATGGAACGATTTAAGGTTTGTGAGAAGGAAACTAAAACGAAGGCCTTTTCCAAGGAAGGGTTAGGTCAACAACCGAAAACTGATCCAAAAGAGAAGGC AAAAGCTGAAACAAGAGATTGGCTTAACAATGTGGTTAGTGATTTGGAAAACCAAATCGATAACTTCGAAGCTGAGGTTGAAGGACTTTCAATTAAGAAA GGAAAGC AAAGACCTCCTCGATTGGTACATTTA GAGAAATCTATCACACGGCATAAAGCTCACAT AAAGAAATTGGAGTCAATATTAAGAC TTTTGGATAATGATGAG TTGAGTCCTGAGCAAGTTAATGATGTG AAAG ATTTCCTGGATGACTATGTTGAACGTAACCAGGAAGATTTTGATGAATTTAGTGATGTGGAAGAGCTCTATAGCACATTACCTATGGAGAAGGTTGAAGCAC TAGAAGACATGGTTTCACTTGCCCCTTCCAGTCTTGTCAAGGGTGTTGCTTCTGTTTCTACTACTGCAG TTTTG AGTACGAAGAGTTCTGTA GCAACTTCACCTACTCAGGCTACTGTATCAGCAGCTCCTTCGCTAAGTGTATCACAAGATCAAGCAGAGGAAACGGCTTCACAAGAAAGCAATCCTGAATCGGCACCACAGACACCACCTTCAAAAGTTGGAAGTCAACCTTCAGTGCCAGTCGTGCCGACTACCATCAGTACTAGTACCGCTGCTGTCTCTGTTTCAGCTGAAACCATTAGTTCCCCTGTACGCCCAATTGTTCCTACCACAACAGCTGCAGTACTTCCTGCTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL C26017               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTGGAAAACCAAATCGATAACTTCGAAGCTGAGGTTGAAGGACTTTCAATTAAGAAA GGAAAGC AAAGACCTCCTCGATTGGTACATTTA GAGAAATCTATCACACGGCATAAAGCTCACAT AAAGAAATTGGAGTCAATATTAAGAC TTTTGGATAATGATGAG TTGAGTCCTGAGCAAGTTAATGATGTG AAAG ATTTCCTGGATGACTATGTTGAACGTAACCAGGAAGATTTTGATGAATTTAGTGATGTGGAAGAGCTCTATAGCACATTACCTATGGAGAAGGTTGAAGCACTTAGAAGACATGGTTTCACTTGCCCCTTCCAGTCTTGTCAAGGGTGTTGCTTCNGTTTCTACTACTGCAGTTTTTGNGGTACGAGGNGTTCTTTAGGCAACTTCACCTACTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB643294             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCAATCTTTAAA GGAAAGN AAAGAACTCCTCGATTGGTACATTTA GAGAAATCTATCACACGGCATAAAGCTCACAT ACCCAAATTGGAGTCAATATTAAGAC TTTTGGATAATGATGAG TTGAGTCCTGAGCAAGTTAATGATGTG AAAG ATTTCCTGGATGACTATGTTGAACGTAACCAGGAAGATTTTGATGAATTTAGTGATGTGGAAGAGCTCTATAGCACATTACCTATGGAGAAGGTTGAAGCAC TAGAAGACATGGTTTCACTTGCCCCTTCCAGTCTTGTCAAGGGTGTTGCTTCTGTTTCTACTACTGCAG TTTTG AGTACGAAGAGTTCTGTA GCAACTTCACCTACTCAGGCTACTGTATCAGCAGCTCCTTCGCTAAGTGTATCACAAGATCAAGCAGAGGAAACGGCTTCACAAGAAAGCAATCCTGAATCGGCACCACAGACACCACCTTCAAAAGTTGGAAGTCAACCTTCAGTGCCAGTCGTGCCGACTACCATCAGTACTAGTACCGCTGCTGTCTCTGTTTCAGCTGAAACCATTAGTTCCCCTGTACGCCCAATTGTTCCTACCACAACAGCTGCAGTACTTCCTGCTTCTGTCACTGCTCGAAGTGCTCCAGAGAACATACCAGCTGTTACTTCAGCTCCTGCGAACTCATCTAGTACCTTGAAGGATGATGACAACATGAGCTTTCCTTCACGTAGATCATCACCTGCAGTCACCGAAATTGGCCTTGGCAGGGGTATTACTCGTGGATTAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF195662             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CATACCAGCTGTTACTTCAGCTCCTGCGAACTCATCTAGTACCTTGAAGGATGATGACAACATGAGCTTTCCTCCACGTAGATCATCACCTGCAGTCACCGAAATTGGCCTTGGCAGGGGTATTACTCGTGGATTAACTAGTCAGGGATTAGGTTCAGCTCCAATAAGTATAGGTCCAGTATCAGGGAATGGATCAGTTAGTGCACTTACTGACTTGTCCAAAAGAAACATGTTGAATACTGATGAGAGGATTAACAGTGGTGGTATTTCTCAGCAGTTGATTTCACCACTTGGTAATAAAGCTCAACCTCAGCANNTTCTGNNNACTACTGATACAATTAGCTCTGATTCTAGTAACACAAATGAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF332348             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTCTCAGAGTTCCTCTATTTCCTCCCAAGCGGGTATTGGGCTTGGGCAGGTACAAGTACCAGAATCTGGGCATACAAAAAGTGAGGAACAACAACAAAGTTTTGCAGAAGATGTTAGTGTGGAATCCGTTGCAACAGCTGGAGCAAACAAACACATGAGTGAAGATGATACAAAGATTCCATTTTCGAATCCGTCAGCATCCATAACAGAAGGTACTCAACTATCTAGAGACCCTGATCTACCAGCTGGGCAGCCTTTGCAACCTGGCATGTCATCATCTGGTGTNTGGTGTTATCGGCCGGAGGAGT GTATCTGATCTTGGTGCAATTGGTGATAACCTCAGTGTAGCTTCTGCAAGTACTAGTCATGACCTGCTTTATAATCTGCAAATGCTTGAAGCTGCTTTCCATAGGCTTCCACAACCAAAGGACTCGGAGCGAGTCAAAAATTATATTCCGAAGCACCCTGCAGTCACCCCTGCCAGCTTCCCGCAAATTCAGGCACCTGTAGTATCAAATCCTGCCTTTTGGGAAAGAATGGGTGGCGATTCATTATCTACGGATTTTGTTGGTTCTTTGCTTTCTACTATCAGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL C26361               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGGGCTTGGGCAGGTACAAGTACCAGAATCTGGGCATACAAAAAGTGAGGAACAACAACAAAGTTTTGCAGAAGATGTTAGTGTGGAATCCGTTGCAACAGCTGGAGCAAACAAACACATGAGTGAAGATGATACAAAGATTCCATTTTCGAATCCGTCAGCATCCATAACAGAAGGTACTCAACTATCTAGAGACCCTGATCTACCAGCTGGGCAGCCTTTGCAACCTGGCATGTCATCATCTGGTGT TGGTGTTATCGGCCGGA GAGTGGTATCTGATCTTGGTGCAATTGGTGATAACCTCAGTGTAGCTTCTGCAAGTACTAGTCATGATCTGCTTTATAATCTGCANAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL D43141               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGCATACAAAAGGTGAGGAACAACAACAAAGTTTTGCAGAAGATGTTAGTGTGGAATCCGTTGCAACAGCTGGNGCAAACAAACACATGAGTGAGGATGATACAAAGATTCCATTTTGGANTCCGTCAGCATCCATAACAGAgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB663341             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAAGATTCCA TTTCGAATCCGTCAGCATCCATAACAGAAGGTACTCAACTATCTAGAGACCCTGATCTACCAGCTGGGCAGCCTTTGCAACCTGGCATGTCATCATCTGGTGT TGGTGTTATCGGCCGGAGGAGT GTATCTGATCTTGGTGCAATTGGTGATAACCTCAGTGTAGCTTCTGCAAGTACTAGTCATGATCTGCTTTATAATCTGCAAATGCTTGAAGCTGCTTTCCATAGGCTTCCACAACCAAAGGACTCGGAGCGAGTCAAAAATTATATTCCGAAGCACCCTGCAGTCACCCCTGCCAGCTTCCCGCAAATTCAGGCACCTGTAGTATCAAATCCTGCCTTTTGGGAAAGAATGGGTGGCGATTCATTATCTACGGA TTTGTT GTTCTTTGCTTTCTACTATCAGCAAAACACATACCAGCAATTTTTAAGTGCCAGAGAACTAAAGAAGCAATCGTGGAGA TTTCACAG AAAGTACAATACTTGGTTCCAACGGCACGTGGAGCCACAAGTTACAACTGATGAGTATGAGCGGGGATCTTATGTGTACTTTGATTTCCAT GTCATAGATGACGGCACAGGATCAGGATGGTGTCAGAGAATCAAGAACGACTTCACATTTGAGTACAACTTCCTTGAGGATGAGCTGTCAGTACAGAC AAATTAGAGAGCCAGGATATTAGGGCTAATCAAATCATTTTCACCATTGTGAATCTTGTAACTTTTAGAACGGAACTGCTGGAATCTGGAACACTTACAGATTAACTTTGTGGTTGGATTT AAAAGCTGTTCTGTGCC                                                                                               ]
[-] EMBL CB672585             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAGCCTTTGCAACCTGGCATGTCATCATCTGGTGT TGGTGTTATCGGCCGGAGGAGT GTATCTGATCTTGGTGCAATTGGTGATAACCTCAGTGTAGCTTCTGCAAGTACTAGTCATGATCTGCTTTATAATCTGCAAATGCTTGAAGCTGCTTTCCATAGGCTTCCACAACCAAAGGACTCGGAGCGAGTCAAAAATTATATTCCGAAGCACCCTGCAGTCACCCCTGCCAGCTTCCCGCAAATTCAGGCACCTGTAGTATCAAATCCTGCCTTTTGGGAAAGAATGGGTGGCGATTCATTATCTACGGA TTTGTT GTTCTTTGCTTTCTACTATCAGCAAAACACATACCAGCAATTTTTAAGTGCCAGAGAACTAAAGAAGCAATCGTGGAGA TTTCACAG AAAGTACAATACTTGGTTCCAACGGCACGTGGAGCCACAAGTTACAACTGATGAGTATGAGCGGGGATCTTATGTGTACTTTGATTTCCAT GTCATAGATGACGGCACAGGATCAGGATGGTGTCAGAGAATCAAGAACGACTTCACATTTGAGTACAACTTCCTTGAGGATGAGCTGTCAGTACAGAC AAATTAGAGAGCCAGGATATTAGGGCTAATCAAATCATTTTCACCATTGTGAATCTTGTAACTTTTAGAACGGAACTGCTGGAATCTGGAACACTTACAGATTAACTTTGTGAGGGGATTT AAAAGCTGTTCTGTGCCTTCCTTTCCAaaaaaaag                                                                             ]
[-] EMBL CB635468             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCTGGTGT TGGTGTTATCGGCCGGAGGAGT GTATCTGATCTTGGTGCAATTGGTGATAACCTCAGTGTAGCTTCTGCAAGTACTAGTCATGATCTGCTTTATAATCTGCAAATGCTTGAAGCTGCTTTCCATAGGCTTCCACAACCAAAGGACTCGGAGCGAGTCAAAAATTATATTCCGAAGCACCCTGCAGTCACCCCTGCCAGCTTCCCGCAAATTCAGGCACCTGTAGTATCAAATCCTGCCTTTTGGGAAAGAATGGGTGGCGATTCATTATCTACGGA TTTGTT GTTCTTTGCTTTCTACTATCAGCAAAACACATACCAGCAATTTTTAAGTGCCAGAGAACTAAAGAAGCAATCGTGGAGA TTTCACAG AAAGTACAATACTTGGTTCCAACGGCACGTGGAGCCACAAGTTACAACTGATGAGTATGAGCGGGGATCTTATGTGTACTTTGATTTCCAT GTCATAGATGACGGCACAGGATCAGGATGGTGTCAGAGAATCAAGAACGACTTCACATTTGAGTACAACTTCCTTGAGGATGAGCTGTCAGTACAGAC AAATTAGAGAGCCAGGATATTAGGGCTAATCAAATCATTTTCACCATTGTGAATCTTGTAACTTTTAGAACGGAACTGCTGGAATCTGGAACACTTCCAGATTAACTTTGTGGTTGGATTTAAAAAGCTGTTCTGTGCCTTCCTGTCCATTCATATTCATACACAATGGCCAAAAAAATAAAAA                                                  ]
[+] EMBL AU092235             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGATCTTGGTGCAATTGGTGATAACCTCAGTGTAGCTTCTGCAAGTACTAGTCATGATCTGCTTTATAATCTGCAAATGCTTGAAGCTGCTTTCCATAGGCTTCCACAACCAAAGGACTCGGAGCGAGTCAAAAATTATATTCCGAAGCACCCTGCAGTCACCCCTGCCAGCTTCCCGCAAATTCAGGCACCTGTAGTATCAAATCCTGCCTTTTGGGAAAGAATGGGTGGCGATTCATTATCTACGGA TTTGTT GTTCTTTGCTTTCTACTATCAGCAAAACACATACCAGCAATTTTTAAGTGCCAGAGAACTAAAGAAGCAATCGTGGAGA TTTCACAG AAAGTACAATACTTGGTTCCAACGGCACGTGGAGCCACAAGTTACAACTGATGAGTATGAGCGGGGATCTTATGTGTACTTTGATTTCCAT GTCATAGATGACGGCACAGGATCAGGATGGTGTCAGAGAATCAAGAACGACTTCACATTTGAGTACAACTTCCTTGAGGATGAGCTGTCAGTACAGAC AAATTAGAGAGCCAGGATATTAGGGCTAATCAAATCATTTTCACCATTGTGAATCTTGTAACTTTTAGAACGGAACTGCTGGAATCTGGAANACTTACAGATTAACTTTGTGGTTGGATTT AAAAGCTGTTCTGTGCCTTCCTTTCCATTCATATTCAaaaaaa                                                                     ]
[-] EMBL CF332349             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGCTTCCACAACCAAAGGACTCGGAGCGAGTCAAAAATTATATTCCGAAGCACCCTGCAGTCACCCCTGCCAGCTTCCCGCAAATTCAGGCACCTGTAGTATCAAATCCTGCCTTTTGGGAAAGAATGGGTGGCGATTCATTATCTACGGA TTTGTT GTTCTTTGCTTTCTACTATCAGCAAAACACATACCAGCAATTTTTAAGTGCCAGAGAACTAAAGAAGCAATCGTGGAGA TTTCACAG AAAGTACAATACTTGGTTCCAACGGCACGTGGAGCCACAAGTTACAACTGATGAGTATGAGCGGGGATCTTATGTGTACTTTGATTTCCAT GTCATAGATGACGGCACAGGATCAGGATGGTGTCAGAGAATCAAGAACGACTTCACATTTGAGTACAACTTCCTTGAGGATGAGCTGTCAGTACAGAC AAATTAGAGAGCCAGGATATTAGGGCTAATCAAATCATTTTCACCATTGTGAATCTTGTAACTTTTAGAACGGAACTGCTGGAATCTGGAACACTTACAGATTAAaaaa                                                                                                                             ]
[+] EMBL BI810293             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATCGTGGAGAGTTTCACAGTAAAGTACAATACTTGGTTCCAACGGCACGTGGAGCCACAAGTTACAACTGATGAGTATGAGCGGGGATCTTATGTGTACTTTGATTTCCATGGTCATAGATGACGGCACAGGATCAGGATGGTGTCAGAGAATCAAGAACGACTTCACATTTGAGTACAACTTCCTTGAGGATGAGCTGTCAGTACAGACAAAATTAGAGAGCCAGGATATTAGGGCTAATCAAATCATTTTCACCATTGTGAATCTTGTAACTTTTAGAACGGAACTGCTGGAATCTGGAACACTTACAGATTAACTTTGTGGTTGGATTT AAAAGCTGTTCTGTGCCTTCCTTTCCAaaaaa                                                                                ]
[+] EMBL CF318489             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TACAGAC AAATTAGAGAGCCAGGATATTAGGGCTAATCAAATCATTTTCACCATTGTGAATCTTGTAACTTTTAGAACGGAACTGCTGGAATCTGGAACACTTACAGATTAACTTTGTGGTTGGATTT AAAAGCTGTTCTGTGCCTTCCTTTCCATTCATATTCATACACAATGGCCAAAACACTCANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_15529#0
CCTCCCCTCAATGCGCCTCAGCTTCGCCTCCGCCCCCAAATCGTAAACCCTAGCCGGCAA
CCTCCCCCCCGCGGGGCAGCCATGGGCGCCAGCCGGAAGCTGCAGGGCGAGATCGACCGC
GTCCTCAAGAAGGTCCAGGAGGGCGTCGACGTCTTCGACAGCATCTGGAACAAGGTCTAC
GACACCGAGAATGCGAACCAGAAGGAGAAGTTCGAGGCCGACCTCAAGAAGGAGATCAAG
AAGCTGCAGCGGTACAGGGACCAGATCAAGACGTGGATCCAGTCCAGCGAGATCAAGGAC
AAGAAGGCTCTTATGGATGCCCGAAAGCAGATTGAACGCGAGATGGAACGATTTAAGGTT
TGTGAGAAGGAAACTAAAACGAAGGCCTTTTCCAAGGAAGGGTTAGGTCAACAACCGAAA
ACTGATCCAAAAGAGAAGGCAAAAGCTGAAACAAGAGATTGGCTTAACAATGTGGTTAGT
GATTTGGAAAACCAAATCGATAACTTCGAAGCTGAGGTTGAAGGACTTTCAATTAAGAAA
GGAAAGCAAAGACCTCCTCGATTGGTACATTTAGAGAAATCTATCACACGGCATAAAGCT
CACATAAAGAAATTGGAGTCAATATTAAGACTTTTGGATAATGATGAGTTGAGTCCTGAG
CAAGTTAATGATGTGAAAGATTTCCTGGATGACTATGTTGAACGTAACCAGGAAGATTTT
GATGAATTTAGTGATGTGGAAGAGCTCTATAGCACATTACCTATGGAGAAGGTTGAAGCA
CTAGAAGACATGGTTTCACTTGCCCCTTCCAGTCTTGTCAAGGGTGTTGCTTCTGTTTCT
ACTACTGCAGTTTTGAGTACGAAGAGTTCTGTAGCAACTTCACCTACTCAGGCTACTGTA
TCAGCAGCTCCTTCGCTAAGTGTATCACAAGATCAAGCAGAGGAAACGGCTTCACAAGAA
AGCAATCCTGAATCGGCACCACAGACACCACCTTCAAAAGTTGGAAGTCAACCTTCAGTG
CCAGTCGTGCCGACTACCATCAGTACTAGTACCGCTGCTGTCTCTGTTTCAGCTGAAACC
ATTAGTTCCCCTGTACGCCCAATTGTTCCTACCACAACAGCTGCAGTACTTCCTGCTTCT
GTCACTGCTCGAAGTGCTCCAGAGAACATACCAGCTGTTACTTCAGCTCCTGCGAACTCA
TCTAGTACCTTGAAGGATGATGACAACATGAGCTTTCCTTCACGTAGATCATCACCTGCA
GTCACCGAAATTGGCCTTGGCAGGGGTATTACTCGTGGATTAACTAGTCAGGGATTAGGT
TCAGCTCCAATAAGTATAGGTCCAGTATCAGGGAATGGATCAGTTAGTGCACTTACTGAC
TTGTCCAAAAGAAACATGTTGAATACTGATGAGAGGATTAACAGTGGTGGTATTTCTCAG
CAGTTGATTTCACCACTTGGTAATAAAGCTCAACCTCAGCAGGTTCTGAGGACTACTGAT
ACAATTAGCTCTGATTCTAGTAACACAAATGAGAGTACTGTTCTTGGAGGAAGAATCTTT
TCTCCCCCAGTTGTTTCTGGGGTTCAATGGAGGCCTCAAAACACTGCTGGTTTGCAAAAT
CAAAGTGAAGCGGGCCAATTTTGTGGAAGACCTGAAATTTCTGCAGATCAAAGGGAGAAG
TACCTGCAAAGATTGCAGCAAGTACAACAACAAGGCAGCCTTCTTAATGTTTCTCATATA
ACGGGCATAAGTCAGAAGCAATTTCCATCACAACAACCAAACCCGCTCTTACAACAGTTT
AACTCTCAGAGTTCCTCTATTTCCTCCCAAGCGGGTATTGGGCTTGGGCAGGTACAAGTA
CCAGAATCTGGGCATACAAAAAGTGAGGAACAACAACAAAGTTTTGCAGAAGATGTTAGT
GTGGAATCCGTTGCAACAGCTGGAGCAAACAAACACATGAGTGAAGATGATACAAAGATT
CCATTTTCGAATCCGTCAGCATCCATAACAGAAGGTACTCAACTATCTAGAGACCCTGAT
CTACCAGCTGGGCAGCCTTTGCAACCTGGCATGTCATCATCTGGTGTTGGTGTTATCGGC
CGGAGGAGTGTATCTGATCTTGGTGCAATTGGTGATAACCTCAGTGTAGCTTCTGCAAGT
ACTAGTCATGATCTGCTTTATAATCTGCAAATGCTTGAAGCTGCTTTCCATAGGCTTCCA
CAACCAAAGGACTCGGAGCGAGTCAAAAATTATATTCCGAAGCACCCTGCAGTCACCCCT
GCCAGCTTCCCGCAAATTCAGGCACCTGTAGTATCAAATCCTGCCTTTTGGGAAAGAATG
GGTGGCGATTCATTATCTACGGATTTGTTGTTCTTTGCTTTCTACTATCAGCAAAACACA
TACCAGCAATTTTTAAGTGCCAGAGAACTAAAGAAGCAATCGTGGAGATTTCACAGAAAG
TACAATACTTGGTTCCAACGGCACGTGGAGCCACAAGTTACAACTGATGAGTATGAGCGG
GGATCTTATGTGTACTTTGATTTCCATGTCATAGATGACGGCACAGGATCAGGATGGTGT
CAGAGAATCAAGAACGACTTCACATTTGAGTACAACTTCCTTGAGGATGAGCTGTCAGTA
CAGACAAATTAGAGAGCCAGGATATTAGGGCTAATCAAATCATTTTCACCATTGTGAATC
TTGTAACTTTTAGAACGGAACTGCTGGAATCTGGAACACTTACAGATTAACTTTGTGGTT
GGATTTAAAAGCTGTTCTGTGCCTTCCTTTCCATTCATATTCATACACAATGGCCAAAAA
AATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_15529#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 650
fasta sequence 
                              [GATAACCCTCAGTGTAGCTTCTGCAAGTACTAGTCATGATCTGCTTTATAATCTGCAAATGCTTGAAGCTGCTTTCCATAGGCTTCCCACAACCAAAGGACTCGGAGCGAGTCAAAAATTATATTCCGAAAGCACCCTGCAGTCACCCTGCCAGCTTCCCGCAAATTCAGGCNCCTGTAGTATCAAATCCTGCCTTTTGGGAAAGAATGGGTGNCGATTCATTATCTACGGATTTGTTGTTCTTTGCTTTCTACTATCCAGCAAAACACATACCAGCAATTTTTAAGTGCCAGAGAACTAAAGAAGCAATCGTGGAGATTTCACAGAAAGTACAATACTTGGTTCCAACGGCACGTGGAGCCACAAGTTACAACTGATGAGTATGAGCGGGGATCTTATGTGTACTTTGATTTCCATGTCATAGATGACGGCACAGGATCAGGATGGTGTCAGAGAATCAAGAACGACTTCACATTTGAGTACAACTTCCTTGAGGATGAGCTGTCAGTACAGACAAATTAGAGAG-CCAGGATATTAGGGCTAATCAAATCATTTTCACCATTGTGAATCTTGTAACTTTTAGAACGGAACTGCTGGAATCTGGAACACTTACAGATTAACTTTGTGGTTGGATTTAAAAAAAAAAAAAA]

[+] EMBL AU056505             [GATAACCCTCAGTGTAGCTTCTGCAAGTACTAGTCATGATCTGCTTTATAATCTGCAAATGCTTGAAGCTGCTTTCCATAGGCTTCCCACAACCAAAGGACTCGGAGCGAGTCAAAAATTATATTCCGAAAGCACCCTGCAGTCACCCTGCCAGCTTCCCGCAAATTCAGGCNCCTGTAGTATCAAATCCTGCCTTTTGGGAAAGAATGGGTGNCGATTCATTATCTACGGATTTGTTGTTCTTTGCTTTCTACTATCCAGCAAAACACATACCAGCAATTTTTAAGTGCCAGAGAACTAAAGAAGCAATCGTGGAGATTTCACAGAAAGTACAATACTTGGTTCCAACGGCACGTGGAGCCACAAGTTACAACTGATGAGTATGAGCGGGGATCTTATGTGTACTTTGATTTCCATGTCATAGATGACGGCACAGGATCAGGATGGTGTCAGAGAATCAAGAACGACTTCACATTTGAGTACAACTTCCTTGAGGATGAGCTGTCAGTACAGACAAATTAGAGAG CCAGGATATTAGGGCTAATCAAATCATTTTCACCATTGTGAATCTTGTAACTTTTAGAACGGAACTGCTGGAATCTGGAACACTTACAGATTAACTTTGTGGTTGGATTTAAAAAAAAAAAAAA]
[-] EMBL CB650506             [                                                                                                                                                                                                                                                                          CACATCCCAGCAATTTTTAATTTCCAGAGAACTAAAGAAGCAATCGTGGAGATTTCCCAGAAAGTCCAATTCTTGGTTCCAACGGCACGTGGAGCCACAAGTTACAAGTGATGAGTATGAGCGGGGATCTTATGTGTACTTTGATTTCCATGTCATAGATGACGGCACAGGATCAGGATGGTGTCAGAGAATCAAGAACGACTTCACATTTGAGTACAACTTCCTTGACGATGAGCTGTCAGTACAGACAAATTAGAGAGACCAGGATATTAGGGCTAATCAAATCATTTTCACCATTGTGAATC                                                                                ]




>consensus_15529#1
GATAACCCTCAGTGTAGCTTCTGCAAGTACTAGTCATGATCTGCTTTATAATCTGCAAAT
GCTTGAAGCTGCTTTCCATAGGCTTCCCACAACCAAAGGACTCGGAGCGAGTCAAAAATT
ATATTCCGAAAGCACCCTGCAGTCACCCTGCCAGCTTCCCGCAAATTCAGGCNCCTGTAG
TATCAAATCCTGCCTTTTGGGAAAGAATGGGTGNCGATTCATTATCTACGGATTTGTTGT
TCTTTGCTTTCTACTATCCAGCAAAACACATACCAGCAATTTTTAAGTGCCAGAGAACTA
AAGAAGCAATCGTGGAGATTTCACAGAAAGTACAATACTTGGTTCCAACGGCACGTGGAG
CCACAAGTTACAACTGATGAGTATGAGCGGGGATCTTATGTGTACTTTGATTTCCATGTC
ATAGATGACGGCACAGGATCAGGATGGTGTCAGAGAATCAAGAACGACTTCACATTTGAG
TACAACTTCCTTGAGGATGAGCTGTCAGTACAGACAAATTAGAGAGCCAGGATATTAGGG
CTAATCAAATCATTTTCACCATTGTGAATCTTGTAACTTTTAGAACGGAACTGCTGGAAT
CTGGAACACTTACAGATTAACTTTGTGGTTGGATTTAAAAAAAAAAAAAA

consensusID : consensus_15529#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 301
fasta sequence 
                              [CATACCAGCTGTTACTTCAGCTCCTGCGAACTCATCTAGTACCTTGAAGGATGATGACAACATGAGCTTTCCTCCACGTAGATCATCACCTGCAGTCACCGAAATTGGCCTTGGCAGGGGTATTACTCGTGGATTAACTAGTCAGGGATTNNGTTCAGCTCCAATAAGTATAGGTCCAGTATCAGGGAATGGATCAGTTAGTGCACTTACTGACTTGTCCAAANNNAACATGTTGAATACTGATGNNNNNATTAACNNNGGTGGTATTTCTCANNANNNNATNNCNNNNCTTGGTAATAAA]

[+] EMBL CF195687             [CATACCAGCTGTTACTTCAGCTCCTGCGAACTCATCTAGTACCTTGAAGGATGATGACAACATGAGCTTTCCTCCACGTAGATCATCACCTGCAGTCACCGAAATTGGCCTTGGCAGGGGTATTACTCGTGGATTAACTAGTCAGGGATTNNGTTCAGCTCCAATAAGTATAGGTCCAGTATCAGGGAATGGATCAGTTAGTGCACTTACTGACTTGTCCAAANNNAACATGTTGAATACTGATGNNNNNATTAACNNNGGTGGTATTTCTCANNANNNNATNNCNNNNCTTGGTAATAAA]




>consensus_15529#2
CATACCAGCTGTTACTTCAGCTCCTGCGAACTCATCTAGTACCTTGAAGGATGATGACAA
CATGAGCTTTCCTCCACGTAGATCATCACCTGCAGTCACCGAAATTGGCCTTGGCAGGGG
TATTACTCGTGGATTAACTAGTCAGGGATTNNGTTCAGCTCCAATAAGTATAGGTCCAGT
ATCAGGGAATGGATCAGTTAGTGCACTTACTGACTTGTCCAAANNNAACATGTTGAATAC
TGATGNNNNNATTAACNNNGGTGGTATTTCTCANNANNNNATNNCNNNNCTTGGTAATAA
A

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15529#0      CCTCCCCTCAATGCGCCTCAGCTTCGCCTCCGCCCCCAAATCGTAAACCCTAGCCGGCAA 60
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      CCTCCCCCCCGCGGGGCAGCCATGGGCGCCAGCCGGAAGCTGCAGGGCGAGATCGACCGC 120
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      GTCCTCAAGAAGGTCCAGGAGGGCGTCGACGTCTTCGACAGCATCTGGAACAAGGTCTAC 180
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      GACACCGAGAATGCGAACCAGAAGGAGAAGTTCGAGGCCGACCTCAAGAAGGAGATCAAG 240
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      AAGCTGCAGCGGTACAGGGACCAGATCAAGACGTGGATCCAGTCCAGCGAGATCAAGGAC 300
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      AAGAAGGCTCTTATGGATGCCCGAAAGCAGATTGAACGCGAGATGGAACGATTTAAGGTT 360
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      TGTGAGAAGGAAACTAAAACGAAGGCCTTTTCCAAGGAAGGGTTAGGTCAACAACCGAAA 420
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      ACTGATCCAAAAGAGAAGGCAAAAGCTGAAACAAGAGATTGGCTTAACAATGTGGTTAGT 480
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      GATTTGGAAAACCAAATCGATAACTTCGAAGCTGAGGTTGAAGGACTTTCAATTAAGAAA 540
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      GGAAAGCAAAGACCTCCTCGATTGGTACATTTAGAGAAATCTATCACACGGCATAAAGCT 600
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      CACATAAAGAAATTGGAGTCAATATTAAGACTTTTGGATAATGATGAGTTGAGTCCTGAG 660
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      CAAGTTAATGATGTGAAAGATTTCCTGGATGACTATGTTGAACGTAACCAGGAAGATTTT 720
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      GATGAATTTAGTGATGTGGAAGAGCTCTATAGCACATTACCTATGGAGAAGGTTGAAGCA 780
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      CTAGAAGACATGGTTTCACTTGCCCCTTCCAGTCTTGTCAAGGGTGTTGCTTCTGTTTCT 840
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      ACTACTGCAGTTTTGAGTACGAAGAGTTCTGTAGCAACTTCACCTACTCAGGCTACTGTA 900
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      TCAGCAGCTCCTTCGCTAAGTGTATCACAAGATCAAGCAGAGGAAACGGCTTCACAAGAA 960
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      AGCAATCCTGAATCGGCACCACAGACACCACCTTCAAAAGTTGGAAGTCAACCTTCAGTG 1020
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      CCAGTCGTGCCGACTACCATCAGTACTAGTACCGCTGCTGTCTCTGTTTCAGCTGAAACC 1080
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      ATTAGTTCCCCTGTACGCCCAATTGTTCCTACCACAACAGCTGCAGTACTTCCTGCTTCT 1140
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      GTCACTGCTCGAAGTGCTCCAGAGAACATACCAGCTGTTACTTCAGCTCCTGCGAACTCA 1200
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      TCTAGTACCTTGAAGGATGATGACAACATGAGCTTTCCTTCACGTAGATCATCACCTGCA 1260
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      GTCACCGAAATTGGCCTTGGCAGGGGTATTACTCGTGGATTAACTAGTCAGGGATTAGGT 1320
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      TCAGCTCCAATAAGTATAGGTCCAGTATCAGGGAATGGATCAGTTAGTGCACTTACTGAC 1380
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      TTGTCCAAAAGAAACATGTTGAATACTGATGAGAGGATTAACAGTGGTGGTATTTCTCAG 1440
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      CAGTTGATTTCACCACTTGGTAATAAAGCTCAACCTCAGCAGGTTCTGAGGACTACTGAT 1500
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      ACAATTAGCTCTGATTCTAGTAACACAAATGAGAGTACTGTTCTTGGAGGAAGAATCTTT 1560
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      TCTCCCCCAGTTGTTTCTGGGGTTCAATGGAGGCCTCAAAACACTGCTGGTTTGCAAAAT 1620
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      CAAAGTGAAGCGGGCCAATTTTGTGGAAGACCTGAAATTTCTGCAGATCAAAGGGAGAAG 1680
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      TACCTGCAAAGATTGCAGCAAGTACAACAACAAGGCAGCCTTCTTAATGTTTCTCATATA 1740
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      ACGGGCATAAGTCAGAAGCAATTTCCATCACAACAACCAAACCCGCTCTTACAACAGTTT 1800
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      AACTCTCAGAGTTCCTCTATTTCCTCCCAAGCGGGTATTGGGCTTGGGCAGGTACAAGTA 1860
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      CCAGAATCTGGGCATACAAAAAGTGAGGAACAACAACAAAGTTTTGCAGAAGATGTTAGT 1920
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      GTGGAATCCGTTGCAACAGCTGGAGCAAACAAACACATGAGTGAAGATGATACAAAGATT 1980
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      CCATTTTCGAATCCGTCAGCATCCATAACAGAAGGTACTCAACTATCTAGAGACCCTGAT 2040
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      CTACCAGCTGGGCAGCCTTTGCAACCTGGCATGTCATCATCTGGTGTTGGTGTTATCGGC 2100
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      CGGAGGAGTGTATCTGATCTTGGTGCAATTGGTGATAACC-TCAGTGTAGCTTCTGCAAG 2159
consensus_15529#1      ---------------------------------GATAACCCTCAGTGTAGCTTCTGCAAG 27
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      TACTAGTCATGATCTGCTTTATAATCTGCAAATGCTTGAAGCTGCTTTCCATAGGCTTCC 2219
consensus_15529#1      TACTAGTCATGATCTGCTTTATAATCTGCAAATGCTTGAAGCTGCTTTCCATAGGCTTCC 87
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      -ACAACCAAAGGACTCGGAGCGAGTCAAAAATTATATTCCGAA-GCACCCTGCAGTCACC 2277
consensus_15529#1      CACAACCAAAGGACTCGGAGCGAGTCAAAAATTATATTCCGAAAGCACCCTGCAGTCACC 147
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      CCTGCCAGCTTCCCGCAAATTCAGGCACCTGTAGTATCAAATCCTGCCTTTTGGGAAAGA 2337
consensus_15529#1      C-TGCCAGCTTCCCGCAAATTCAGGCNCCTGTAGTATCAAATCCTGCCTTTTGGGAAAGA 206
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      ATGGGTGGCGATTCATTATCTACGGATTTGTTGTTCTTTGCTTTCTACTATC-AGCAAAA 2396
consensus_15529#1      ATGGGTGNCGATTCATTATCTACGGATTTGTTGTTCTTTGCTTTCTACTATCCAGCAAAA 266
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      CACATACCAGCAATTTTTAAGTGCCAGAGAACTAAAGAAGCAATCGTGGAGATTTCACAG 2456
consensus_15529#1      CACATACCAGCAATTTTTAAGTGCCAGAGAACTAAAGAAGCAATCGTGGAGATTTCACAG 326
consensus_15529#2      ----------------------------------------------------CATACCAG 8
                                                                             *  ***

consensus_15529#0      AAAGTACAATACTTGGTTCCAACGGCACGTGGAGCCACAAGTTACAACTGATGAGTATGA 2516
consensus_15529#1      AAAGTACAATACTTGGTTCCAACGGCACGTGGAGCCACAAGTTACAACTGATGAGTATGA 386
consensus_15529#2      CTGTTACTTCAGCTCCTGCGAACT-CATCTAGTACCTTGAAGGATGA-TGAC-AACATGA 65
                           ***   *  *  * * ***  **  * *  **   *   *  * ***  *  ****

consensus_15529#0      GCGGGGATCTTATGTGTACTTTGATTTCCATGTCATAGATGACGGCACAGGATCAGGATG 2576
consensus_15529#1      GCGGGGATCTTATGTGTACTTTGATTTCCATGTCATAGATGACGGCACAGGATCAGGATG 446
consensus_15529#2      GCTTTCCTCC-ACGTAGATCATCACCTGCA-GTCACCGAAATTGGCCTTGG-CAGGGGTA 122
                       **     **  * **  *   * *  * ** ****  **    ***   **    ** * 

consensus_15529#0      GTGTCAGAGAATCAAGAACGACTTCACATTTGAGTACAACTTCCTTGAGGATGAGCTGTC 2636
consensus_15529#1      GTGTCAGAGAATCAAGAACGACTTCACATTTGAGTACAACTTCCTTGAGGATGAGCTGTC 506
consensus_15529#2      TTACTCGTGGATT---AACTAGTCAGGGATTNNGTTCAGCTCCAATAAGTATAGGT--CC 177
                        *    * * **    *** * *      **  ** ** ** *  * ** **  *    *

consensus_15529#0      AGTACAGACAAATTAGAGAGCCAGGATATTAGGGCTAATCAAATCATTTTCACCATTGTG 2696
consensus_15529#1      AGTACAGACAAATTAGAGAGCCAGGATATTAGGGCTAATCAAATCATTTTCACCATTGTG 566
consensus_15529#2      AGTATCAGGGAATGGATCAGTTAGTGCACTTA--CTGACTTGTCCAAANNNAACATGTTG 235
                       ****      ***     **  **   * *    ** *      **     * ***  **

consensus_15529#0      AATCTTGTAACTTTTAGAACGGAACTGCTGGAATCTGGAACACTTACAGATTAACTTTGT 2756
consensus_15529#1      AATCTTGTAACTTTTAGAACGGAACTGCTGGAATCTGGAACACTTACAGATTAACTTTGT 626
consensus_15529#2      AATACTG--ATGNNNNNATTAACNNNGGTGGTATTT------CTCANNANNNNATNNCNN 287
                       ***  **  *       *        * *** ** *      ** *       *      

consensus_15529#0      GGTTGGATTTAAAAGCTGTTCTGTGCCTTCCTTTCCATTCATATTCATACACAATGGCCA 2816
consensus_15529#1      GGTTGGATTTAAAAAAAAAAAAAA------------------------------------ 650
consensus_15529#2      NNCTTGGTAATAAA---------------------------------------------- 301
                          * * *   ***                                              

consensus_15529#0      AAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2876
consensus_15529#1      ------------------------------------------------------------
consensus_15529#2      ------------------------------------------------------------
                                                                                   

consensus_15529#0      AA 2878
consensus_15529#1      --
consensus_15529#2      --


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)